LOCUS       NZ_JBJLOO010000000   5080681 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 1012053, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLOO000000000
VERSION     NZ_JBJLOO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061608
            Assembly: GCF_045569455.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5080681)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5080681)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLOO000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLOO000000000.  This version of the project
            (01) has the accession number NZ_JBJLOO010000000, and consists of
            sequences JBJLOO010000001-JBJLOO010000243.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045569455.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:40:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,140
            CDSs (total)                      :: 5,041
            Genes (coding)                    :: 4,777
            CDSs (with protein)               :: 4,777
            Genes (RNA)                       :: 99
            rRNAs                             :: 2, 5 (16S, 23S)
            partial rRNAs                     :: 2, 5 (16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 264
            CDSs (without protein)            :: 264
            Pseudo Genes (ambiguous residues) :: 0 of 264
            Pseudo Genes (frameshifted)       :: 81 of 264
            Pseudo Genes (incomplete)         :: 181 of 264
            Pseudo Genes (internal stop)      :: 51 of 264
            Pseudo Genes (multiple problems)  :: 44 of 264
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5080681
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="1012053"
                     /isolation_source="RECTAL SWAB"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-09-11"
                     /collected_by="HUMS"
WGS         JBJLOO010000001-JBJLOO010000243
WGS_SCAFLD  NZ_JBJLOO010000001-NZ_JBJLOO010000243
//
LOCUS       NZ_JBJLOF010000000   5280317 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 680329, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLOF000000000
VERSION     NZ_JBJLOF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061617
            Assembly: GCF_045569395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5280317)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5280317)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLOF000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLOF000000000.  This version of the project
            (01) has the accession number NZ_JBJLOF010000000, and consists of
            sequences JBJLOF010000001-JBJLOF010000196.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.22
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045569395.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:42:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,298
            CDSs (total)                      :: 5,197
            Genes (coding)                    :: 4,988
            CDSs (with protein)               :: 4,988
            Genes (RNA)                       :: 101
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 3 (5S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 209
            CDSs (without protein)            :: 209
            Pseudo Genes (ambiguous residues) :: 0 of 209
            Pseudo Genes (frameshifted)       :: 65 of 209
            Pseudo Genes (incomplete)         :: 135 of 209
            Pseudo Genes (internal stop)      :: 44 of 209
            Pseudo Genes (multiple problems)  :: 34 of 209
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5280317
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="680329"
                     /isolation_source="RECTAL SWAB"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2022-05-12"
                     /collected_by="HUMS"
WGS         JBJLOF010000001-JBJLOF010000196
WGS_SCAFLD  NZ_JBJLOF010000001-NZ_JBJLOF010000196
//
LOCUS       NZ_JBIGPW010000000   5244015 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E177, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGPW000000000
VERSION     NZ_JBIGPW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130525
            Assembly: GCF_045573765.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5244015)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGPW000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGPW000000000.  This version of the project
            (01) has the accession number NZ_JBIGPW010000000, and consists of
            sequences JBIGPW010000001-JBIGPW010000020.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 490x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045573765.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:41:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,181
            CDSs (total)                      :: 5,057
            Genes (coding)                    :: 4,666
            CDSs (with protein)               :: 4,666
            Genes (RNA)                       :: 124
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 91
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 391
            CDSs (without protein)            :: 391
            Pseudo Genes (ambiguous residues) :: 0 of 391
            Pseudo Genes (frameshifted)       :: 249 of 391
            Pseudo Genes (incomplete)         :: 145 of 391
            Pseudo Genes (internal stop)      :: 49 of 391
            Pseudo Genes (multiple problems)  :: 50 of 391
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5244015
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E177"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGPW010000001-JBIGPW010000020
WGS_SCAFLD  NZ_JBIGPW010000001-NZ_JBIGPW010000020
//
LOCUS       NZ_JBIGOY010000000   5203179 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E228, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGOY000000000
VERSION     NZ_JBIGOY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130565
            Assembly: GCF_045573305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5203179)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGOY000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGOY000000000.  This version of the project
            (01) has the accession number NZ_JBIGOY010000000, and consists of
            sequences JBIGOY010000001-JBIGOY010000011.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 301x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045573305.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:39:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,129
            CDSs (total)                      :: 5,007
            Genes (coding)                    :: 4,640
            CDSs (with protein)               :: 4,640
            Genes (RNA)                       :: 122
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 90
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 367
            CDSs (without protein)            :: 367
            Pseudo Genes (ambiguous residues) :: 0 of 367
            Pseudo Genes (frameshifted)       :: 207 of 367
            Pseudo Genes (incomplete)         :: 164 of 367
            Pseudo Genes (internal stop)      :: 64 of 367
            Pseudo Genes (multiple problems)  :: 59 of 367
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5203179
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E228"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGOY010000001-JBIGOY010000011
WGS_SCAFLD  NZ_JBIGOY010000001-NZ_JBIGOY010000011
//
LOCUS       NZ_JBIGQW010000000   5151959 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E140, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGQW000000000
VERSION     NZ_JBIGQW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130490
            Assembly: GCF_045574305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5151959)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGQW000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGQW000000000.  This version of the project
            (01) has the accession number NZ_JBIGQW010000000, and consists of
            sequences JBIGQW010000001-JBIGQW010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 198x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045574305.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:31:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,050
            CDSs (total)                      :: 4,930
            Genes (coding)                    :: 4,669
            CDSs (with protein)               :: 4,669
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 261
            CDSs (without protein)            :: 261
            Pseudo Genes (ambiguous residues) :: 0 of 261
            Pseudo Genes (frameshifted)       :: 121 of 261
            Pseudo Genes (incomplete)         :: 141 of 261
            Pseudo Genes (internal stop)      :: 50 of 261
            Pseudo Genes (multiple problems)  :: 45 of 261
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5151959
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E140"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGQW010000001-JBIGQW010000006
WGS_SCAFLD  NZ_JBIGQW010000001-NZ_JBIGQW010000006
//
LOCUS       NZ_JBJLOG010000000   5282511 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 673020, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLOG000000000
VERSION     NZ_JBJLOG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061616
            Assembly: GCF_045570575.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5282511)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5282511)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLOG000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLOG000000000.  This version of the project
            (01) has the accession number NZ_JBJLOG010000000, and consists of
            sequences JBJLOG010000001-JBJLOG010000190.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.21
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045570575.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:40:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,300
            CDSs (total)                      :: 5,197
            Genes (coding)                    :: 4,986
            CDSs (with protein)               :: 4,986
            Genes (RNA)                       :: 103
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 3 (5S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 211
            CDSs (without protein)            :: 211
            Pseudo Genes (ambiguous residues) :: 0 of 211
            Pseudo Genes (frameshifted)       :: 63 of 211
            Pseudo Genes (incomplete)         :: 139 of 211
            Pseudo Genes (internal stop)      :: 45 of 211
            Pseudo Genes (multiple problems)  :: 35 of 211
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5282511
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="673020"
                     /isolation_source="SURGICAL WOUND"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2022-05-03"
                     /collected_by="HUMS"
WGS         JBJLOG010000001-JBJLOG010000190
WGS_SCAFLD  NZ_JBJLOG010000001-NZ_JBJLOG010000190
//
LOCUS       NZ_JBIGOF010000000   4860724 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E259, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGOF000000000
VERSION     NZ_JBIGOF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130593
            Assembly: GCF_045572955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4860724)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGOF000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGOF000000000.  This version of the project
            (01) has the accession number NZ_JBIGOF010000000, and consists of
            sequences JBIGOF010000001-JBIGOF010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 176x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045572955.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:36:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,725
            CDSs (total)                      :: 4,612
            Genes (coding)                    :: 4,475
            CDSs (with protein)               :: 4,475
            Genes (RNA)                       :: 113
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 137
            CDSs (without protein)            :: 137
            Pseudo Genes (ambiguous residues) :: 0 of 137
            Pseudo Genes (frameshifted)       :: 65 of 137
            Pseudo Genes (incomplete)         :: 73 of 137
            Pseudo Genes (internal stop)      :: 22 of 137
            Pseudo Genes (multiple problems)  :: 22 of 137
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4860724
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E259"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGOF010000001-JBIGOF010000005
WGS_SCAFLD  NZ_JBIGOF010000001-NZ_JBIGOF010000005
//
LOCUS       NZ_AOPW01000000      3260684 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Enterococcus faecalis EnGen0310 = MMH594, whole genome shotgun
            sequencing project.
ACCESSION   NZ_AOPW00000000
VERSION     NZ_AOPW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03457011
            Assembly: GCF_000968735.2
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecalis EnGen0310 = MMH594
  ORGANISM  Enterococcus faecalis EnGen0310 = MMH594
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 3260684)
  AUTHORS   La Rosa,S.L., Snipen,L.G., Murray,B.E., Willems,R.J., Gilmore,M.S.,
            Diep,D.B., Nes,I.F. and Brede,D.A.
  TITLE     A genomic virulence reference map of Enterococcus faecalis reveals
            an important contribution of phage03-like elements in nosocomial
            genetic lineages to pathogenicity in a Caenorhabditis elegans
            infection model
  JOURNAL   Infect Immun 83 (5), 2156-2167 (2015)
   PUBMED   25776747
REFERENCE   2  (bases 1 to 3260684)
  AUTHORS   Leanti La Rosa,S., Nes,I.F., Diep,D.B. and Brede,D.A.
  TITLE     Genome Sequence of the nosocomial blood isolate Enterococcus
            faecalis MMH594
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 3260684)
  AUTHORS   Leanti La Rosa,S., Nes,I.F., Diep,D.B. and Brede,D.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-JAN-2013) Department of Chemistry, Biotechnology and
            Food Science, Norwegian University of Life Sciences, Post box 5003,
            Aas 1432, Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AOPW00000000.1.
            
            On Nov 9, 2015 this sequence version replaced gi:805301486.
            The Enterococcus faecalis EnGen0310 = MMH594 whole genome shotgun
            (WGS) project has the project accession NZ_AOPW00000000.  This
            version of the project (01) has the accession number
            NZ_AOPW01000000, and consists of sequences
            AOPW01000077-AOPW01000105.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            Bacteria and source DNA available from Laboratory of Microbial Gene
            Technology (LMG), Norwegian University of Life Sciences, Norway.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC Genomics Workbench v. 5.5
            Expected Final Version :: No
            Genome Coverage        :: 500x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000968735.2-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:55:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,296
            CDSs (total)                      :: 3,234
            Genes (coding)                    :: 3,168
            CDSs (with protein)               :: 3,168
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 66
            CDSs (without protein)            :: 66
            Pseudo Genes (ambiguous residues) :: 0 of 66
            Pseudo Genes (frameshifted)       :: 25 of 66
            Pseudo Genes (incomplete)         :: 36 of 66
            Pseudo Genes (internal stop)      :: 10 of 66
            Pseudo Genes (multiple problems)  :: 4 of 66
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3260684
                     /organism="Enterococcus faecalis EnGen0310 = MMH594"
                     /mol_type="genomic DNA"
                     /strain="MMH594"
                     /db_xref="taxon:1158653"
WGS         AOPW01000001-AOPW01000075
WGS         AOPW01000077-AOPW01000105
WGS_SCAFLD  NZ_AOPW01000001-NZ_AOPW01000075
WGS_SCAFLD  NZ_AOPW01000077-NZ_AOPW01000105
//
LOCUS       NZ_JBIGNF010000000   5150369 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E299, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGNF000000000
VERSION     NZ_JBIGNF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130628
            Assembly: GCF_045572415.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5150369)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGNF000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGNF000000000.  This version of the project
            (01) has the accession number NZ_JBIGNF010000000, and consists of
            sequences JBIGNF010000001-JBIGNF010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 254x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045572415.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:21:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,055
            CDSs (total)                      :: 4,938
            Genes (coding)                    :: 4,703
            CDSs (with protein)               :: 4,703
            Genes (RNA)                       :: 117
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 235
            CDSs (without protein)            :: 235
            Pseudo Genes (ambiguous residues) :: 0 of 235
            Pseudo Genes (frameshifted)       :: 135 of 235
            Pseudo Genes (incomplete)         :: 116 of 235
            Pseudo Genes (internal stop)      :: 24 of 235
            Pseudo Genes (multiple problems)  :: 35 of 235
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5150369
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E299"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGNF010000001-JBIGNF010000006
WGS_SCAFLD  NZ_JBIGNF010000001-NZ_JBIGNF010000006
//
LOCUS       NZ_JBIGPZ010000000   5167548 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E173, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGPZ000000000
VERSION     NZ_JBIGPZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130522
            Assembly: GCF_045573845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5167548)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGPZ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGPZ000000000.  This version of the project
            (01) has the accession number NZ_JBIGPZ010000000, and consists of
            sequences JBIGPZ010000001-JBIGPZ010000014.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 242x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045573845.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:43:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,084
            CDSs (total)                      :: 4,964
            Genes (coding)                    :: 4,683
            CDSs (with protein)               :: 4,683
            Genes (RNA)                       :: 120
            rRNAs                             :: 7, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 7, 6 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 90
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 281
            CDSs (without protein)            :: 281
            Pseudo Genes (ambiguous residues) :: 0 of 281
            Pseudo Genes (frameshifted)       :: 151 of 281
            Pseudo Genes (incomplete)         :: 125 of 281
            Pseudo Genes (internal stop)      :: 36 of 281
            Pseudo Genes (multiple problems)  :: 29 of 281
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5167548
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E173"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGPZ010000001-JBIGPZ010000014
WGS_SCAFLD  NZ_JBIGPZ010000001-NZ_JBIGPZ010000014
//
LOCUS       NZ_JBIGMW010000000   5386030 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E313, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGMW000000000
VERSION     NZ_JBIGMW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130641
            Assembly: GCF_045572195.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5386030)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGMW000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGMW000000000.  This version of the project
            (01) has the accession number NZ_JBIGMW010000000, and consists of
            sequences JBIGMW010000001-JBIGMW010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 250x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045572195.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:33:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,196
            CDSs (total)                      :: 5,077
            Genes (coding)                    :: 4,823
            CDSs (with protein)               :: 4,823
            Genes (RNA)                       :: 119
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 254
            CDSs (without protein)            :: 254
            Pseudo Genes (ambiguous residues) :: 0 of 254
            Pseudo Genes (frameshifted)       :: 112 of 254
            Pseudo Genes (incomplete)         :: 153 of 254
            Pseudo Genes (internal stop)      :: 49 of 254
            Pseudo Genes (multiple problems)  :: 54 of 254
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5386030
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E313"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGMW010000001-JBIGMW010000005
WGS_SCAFLD  NZ_JBIGMW010000001-NZ_JBIGMW010000005
//
LOCUS       NZ_JBIGOP010000000   5119520 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E246, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGOP000000000
VERSION     NZ_JBIGOP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130581
            Assembly: GCF_045573085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5119520)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGOP000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGOP000000000.  This version of the project
            (01) has the accession number NZ_JBIGOP010000000, and consists of
            sequences JBIGOP010000001-JBIGOP010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 271x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045573085.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:45:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,026
            CDSs (total)                      :: 4,910
            Genes (coding)                    :: 4,633
            CDSs (with protein)               :: 4,633
            Genes (RNA)                       :: 116
            rRNAs                             :: 8, 7, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 87
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 277
            CDSs (without protein)            :: 277
            Pseudo Genes (ambiguous residues) :: 0 of 277
            Pseudo Genes (frameshifted)       :: 149 of 277
            Pseudo Genes (incomplete)         :: 150 of 277
            Pseudo Genes (internal stop)      :: 37 of 277
            Pseudo Genes (multiple problems)  :: 55 of 277
            Pseudo Genes (short protein)      :: 1 of 277
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5119520
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E246"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGOP010000001-JBIGOP010000007
WGS_SCAFLD  NZ_JBIGOP010000001-NZ_JBIGOP010000007
//
LOCUS       NZ_JBJLON010000000   5530305 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 1023956, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLON000000000
VERSION     NZ_JBJLON000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061609
            Assembly: GCF_045569515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5530305)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5530305)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLON000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLON000000000.  This version of the project
            (01) has the accession number NZ_JBJLON010000000, and consists of
            sequences JBJLON010000001-JBJLON010000436.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.14
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045569515.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:52:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,850
            CDSs (total)                      :: 5,753
            Genes (coding)                    :: 5,420
            CDSs (with protein)               :: 5,420
            Genes (RNA)                       :: 97
            rRNAs                             :: 4, 1 (16S, 23S)
            partial rRNAs                     :: 4, 1 (16S, 23S)
            tRNAs                             :: 80
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 333
            CDSs (without protein)            :: 333
            Pseudo Genes (ambiguous residues) :: 0 of 333
            Pseudo Genes (frameshifted)       :: 94 of 333
            Pseudo Genes (incomplete)         :: 227 of 333
            Pseudo Genes (internal stop)      :: 67 of 333
            Pseudo Genes (multiple problems)  :: 48 of 333
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5530305
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="1023956"
                     /isolation_source="RECTAL SWAB"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-09-27"
                     /collected_by="HUMS"
WGS         JBJLON010000001-JBJLON010000436
WGS_SCAFLD  NZ_JBJLON010000001-NZ_JBJLON010000436
//
LOCUS       NZ_JBIGQV010000000   5202511 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E141, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGQV000000000
VERSION     NZ_JBIGQV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130491
            Assembly: GCF_045574345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5202511)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGQV000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGQV000000000.  This version of the project
            (01) has the accession number NZ_JBIGQV010000000, and consists of
            sequences JBIGQV010000001-JBIGQV010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 219x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045574345.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:30:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,112
            CDSs (total)                      :: 4,992
            Genes (coding)                    :: 4,736
            CDSs (with protein)               :: 4,736
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 86
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 256
            CDSs (without protein)            :: 256
            Pseudo Genes (ambiguous residues) :: 0 of 256
            Pseudo Genes (frameshifted)       :: 121 of 256
            Pseudo Genes (incomplete)         :: 140 of 256
            Pseudo Genes (internal stop)      :: 48 of 256
            Pseudo Genes (multiple problems)  :: 46 of 256
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5202511
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E141"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGQV010000001-JBIGQV010000006
WGS_SCAFLD  NZ_JBIGQV010000001-NZ_JBIGQV010000006
//
LOCUS       NZ_JBJLNX010000000   5192041 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 901482, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLNX000000000
VERSION     NZ_JBJLNX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061625
            Assembly: GCF_045570275.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5192041)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5192041)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLNX000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLNX000000000.  This version of the project
            (01) has the accession number NZ_JBJLNX010000000, and consists of
            sequences JBJLNX010000001-JBJLNX010000194.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.30
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045570275.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:28:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,196
            CDSs (total)                      :: 5,113
            Genes (coding)                    :: 4,855
            CDSs (with protein)               :: 4,855
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 4 (16S, 23S)
            partial rRNAs                     :: 2, 4 (16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 258
            CDSs (without protein)            :: 258
            Pseudo Genes (ambiguous residues) :: 0 of 258
            Pseudo Genes (frameshifted)       :: 85 of 258
            Pseudo Genes (incomplete)         :: 171 of 258
            Pseudo Genes (internal stop)      :: 52 of 258
            Pseudo Genes (multiple problems)  :: 44 of 258
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5192041
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="901482"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-03-22"
                     /collected_by="HUMS"
WGS         JBJLNX010000001-JBJLNX010000194
WGS_SCAFLD  NZ_JBJLNX010000001-NZ_JBJLNX010000194
//
LOCUS       NZ_JBIGNE010000000   5193393 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E300, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGNE000000000
VERSION     NZ_JBIGNE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130629
            Assembly: GCF_045572395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5193393)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGNE000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGNE000000000.  This version of the project
            (01) has the accession number NZ_JBIGNE010000000, and consists of
            sequences JBIGNE010000001-JBIGNE010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 180x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045572395.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:28:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,124
            CDSs (total)                      :: 5,003
            Genes (coding)                    :: 4,666
            CDSs (with protein)               :: 4,666
            Genes (RNA)                       :: 121
            rRNAs                             :: 8, 8, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 156 of 337
            Pseudo Genes (incomplete)         :: 185 of 337
            Pseudo Genes (internal stop)      :: 52 of 337
            Pseudo Genes (multiple problems)  :: 47 of 337
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5193393
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E300"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGNE010000001-JBIGNE010000007
WGS_SCAFLD  NZ_JBIGNE010000001-NZ_JBIGNE010000007
//
LOCUS       NZ_JBIGPE010000000   4888209 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E215, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGPE000000000
VERSION     NZ_JBIGPE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130557
            Assembly: GCF_045573445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4888209)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGPE000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGPE000000000.  This version of the project
            (01) has the accession number NZ_JBIGPE010000000, and consists of
            sequences JBIGPE010000001-JBIGPE010000102.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 76x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045573445.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:42:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,848
            CDSs (total)                      :: 4,766
            Genes (coding)                    :: 4,440
            CDSs (with protein)               :: 4,440
            Genes (RNA)                       :: 82
            rRNAs                             :: 1, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 326
            CDSs (without protein)            :: 326
            Pseudo Genes (ambiguous residues) :: 0 of 326
            Pseudo Genes (frameshifted)       :: 164 of 326
            Pseudo Genes (incomplete)         :: 177 of 326
            Pseudo Genes (internal stop)      :: 71 of 326
            Pseudo Genes (multiple problems)  :: 75 of 326
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4888209
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E215"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGPE010000001-JBIGPE010000102
WGS_SCAFLD  NZ_JBIGPE010000001-NZ_JBIGPE010000102
//
LOCUS       NZ_JBIGNL010000000   5109921 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E290, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGNL000000000
VERSION     NZ_JBIGNL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130621
            Assembly: GCF_045572615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5109921)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGNL000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGNL000000000.  This version of the project
            (01) has the accession number NZ_JBIGNL010000000, and consists of
            sequences JBIGNL010000001-JBIGNL010000010.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 332x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045572615.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:43:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,043
            CDSs (total)                      :: 4,921
            Genes (coding)                    :: 4,592
            CDSs (with protein)               :: 4,592
            Genes (RNA)                       :: 122
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 329
            CDSs (without protein)            :: 329
            Pseudo Genes (ambiguous residues) :: 0 of 329
            Pseudo Genes (frameshifted)       :: 171 of 329
            Pseudo Genes (incomplete)         :: 168 of 329
            Pseudo Genes (internal stop)      :: 39 of 329
            Pseudo Genes (multiple problems)  :: 46 of 329
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5109921
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E290"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGNL010000001-JBIGNL010000010
WGS_SCAFLD  NZ_JBIGNL010000001-NZ_JBIGNL010000010
//
LOCUS       NZ_JBIGNW010000000   5556588 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E276, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGNW000000000
VERSION     NZ_JBIGNW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130608
            Assembly: GCF_045572755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5556588)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGNW000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGNW000000000.  This version of the project
            (01) has the accession number NZ_JBIGNW010000000, and consists of
            sequences JBIGNW010000001-JBIGNW010000026.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 362x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045572755.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:41:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,541
            CDSs (total)                      :: 5,427
            Genes (coding)                    :: 4,995
            CDSs (with protein)               :: 4,995
            Genes (RNA)                       :: 114
            rRNAs                             :: 6, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 432
            CDSs (without protein)            :: 432
            Pseudo Genes (ambiguous residues) :: 0 of 432
            Pseudo Genes (frameshifted)       :: 249 of 432
            Pseudo Genes (incomplete)         :: 203 of 432
            Pseudo Genes (internal stop)      :: 60 of 432
            Pseudo Genes (multiple problems)  :: 72 of 432
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5556588
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E276"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGNW010000001-JBIGNW010000026
WGS_SCAFLD  NZ_JBIGNW010000001-NZ_JBIGNW010000026
//
LOCUS       NZ_JBIGQB010000000   5051045 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E171, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGQB000000000
VERSION     NZ_JBIGQB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130520
            Assembly: GCF_045573885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5051045)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGQB000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGQB000000000.  This version of the project
            (01) has the accession number NZ_JBIGQB010000000, and consists of
            sequences JBIGQB010000001-JBIGQB010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 103x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045573885.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:50:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,919
            CDSs (total)                      :: 4,803
            Genes (coding)                    :: 4,565
            CDSs (with protein)               :: 4,565
            Genes (RNA)                       :: 116
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 87
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 238
            CDSs (without protein)            :: 238
            Pseudo Genes (ambiguous residues) :: 0 of 238
            Pseudo Genes (frameshifted)       :: 122 of 238
            Pseudo Genes (incomplete)         :: 143 of 238
            Pseudo Genes (internal stop)      :: 42 of 238
            Pseudo Genes (multiple problems)  :: 60 of 238
            Pseudo Genes (short protein)      :: 1 of 238
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5051045
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E171"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGQB010000001-JBIGQB010000005
WGS_SCAFLD  NZ_JBIGQB010000001-NZ_JBIGQB010000005
//
LOCUS       NZ_JBIGQC010000000   5059820 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E168, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGQC000000000
VERSION     NZ_JBIGQC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130517
            Assembly: GCF_045573985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5059820)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGQC000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGQC000000000.  This version of the project
            (01) has the accession number NZ_JBIGQC010000000, and consists of
            sequences JBIGQC010000001-JBIGQC010000003.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 153x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045573985.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:33:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,943
            CDSs (total)                      :: 4,830
            Genes (coding)                    :: 4,583
            CDSs (with protein)               :: 4,583
            Genes (RNA)                       :: 113
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 247
            CDSs (without protein)            :: 247
            Pseudo Genes (ambiguous residues) :: 0 of 247
            Pseudo Genes (frameshifted)       :: 130 of 247
            Pseudo Genes (incomplete)         :: 145 of 247
            Pseudo Genes (internal stop)      :: 43 of 247
            Pseudo Genes (multiple problems)  :: 62 of 247
            Pseudo Genes (short protein)      :: 1 of 247
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5059820
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E168"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGQC010000001-JBIGQC010000003
WGS_SCAFLD  NZ_JBIGQC010000001-NZ_JBIGQC010000003
//
LOCUS       NZ_JBIGOI010000000   4776586 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E256, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGOI000000000
VERSION     NZ_JBIGOI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130590
            Assembly: GCF_045573045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4776586)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGOI000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGOI000000000.  This version of the project
            (01) has the accession number NZ_JBIGOI010000000, and consists of
            sequences JBIGOI010000001-JBIGOI010000002.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 581x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045573045.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:34:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,631
            CDSs (total)                      :: 4,515
            Genes (coding)                    :: 4,380
            CDSs (with protein)               :: 4,380
            Genes (RNA)                       :: 116
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 135
            CDSs (without protein)            :: 135
            Pseudo Genes (ambiguous residues) :: 0 of 135
            Pseudo Genes (frameshifted)       :: 73 of 135
            Pseudo Genes (incomplete)         :: 60 of 135
            Pseudo Genes (internal stop)      :: 24 of 135
            Pseudo Genes (multiple problems)  :: 19 of 135
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4776586
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E256"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGOI010000001-JBIGOI010000002
WGS_SCAFLD  NZ_JBIGOI010000001-NZ_JBIGOI010000002
//
LOCUS       NZ_JBIGPX010000000   5228845 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E176, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGPX000000000
VERSION     NZ_JBIGPX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130524
            Assembly: GCF_045573865.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5228845)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGPX000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGPX000000000.  This version of the project
            (01) has the accession number NZ_JBIGPX010000000, and consists of
            sequences JBIGPX010000001-JBIGPX010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 275x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045573865.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:43:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,147
            CDSs (total)                      :: 5,029
            Genes (coding)                    :: 4,774
            CDSs (with protein)               :: 4,774
            Genes (RNA)                       :: 118
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 255
            CDSs (without protein)            :: 255
            Pseudo Genes (ambiguous residues) :: 0 of 255
            Pseudo Genes (frameshifted)       :: 124 of 255
            Pseudo Genes (incomplete)         :: 130 of 255
            Pseudo Genes (internal stop)      :: 44 of 255
            Pseudo Genes (multiple problems)  :: 40 of 255
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5228845
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E176"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGPX010000001-JBIGPX010000007
WGS_SCAFLD  NZ_JBIGPX010000001-NZ_JBIGPX010000007
//
LOCUS       NZ_JBIGPB010000000   4602259 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E225, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGPB000000000
VERSION     NZ_JBIGPB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130562
            Assembly: GCF_045573405.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4602259)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGPB000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGPB000000000.  This version of the project
            (01) has the accession number NZ_JBIGPB010000000, and consists of
            sequences JBIGPB010000001-JBIGPB010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 295x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045573405.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:38:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,527
            CDSs (total)                      :: 4,415
            Genes (coding)                    :: 4,106
            CDSs (with protein)               :: 4,106
            Genes (RNA)                       :: 112
            rRNAs                             :: 8, 8, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 309
            CDSs (without protein)            :: 309
            Pseudo Genes (ambiguous residues) :: 0 of 309
            Pseudo Genes (frameshifted)       :: 161 of 309
            Pseudo Genes (incomplete)         :: 146 of 309
            Pseudo Genes (internal stop)      :: 38 of 309
            Pseudo Genes (multiple problems)  :: 34 of 309
            Pseudo Genes (short protein)      :: 1 of 309
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4602259
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E225"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGPB010000001-JBIGPB010000008
WGS_SCAFLD  NZ_JBIGPB010000001-NZ_JBIGPB010000008
//
LOCUS       NZ_JBIGQA010000000   5168449 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E172, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGQA000000000
VERSION     NZ_JBIGQA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130521
            Assembly: GCF_045573905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5168449)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGQA000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGQA000000000.  This version of the project
            (01) has the accession number NZ_JBIGQA010000000, and consists of
            sequences JBIGQA010000001-JBIGQA010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 106x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045573905.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:54:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,965
            CDSs (total)                      :: 4,851
            Genes (coding)                    :: 4,628
            CDSs (with protein)               :: 4,628
            Genes (RNA)                       :: 114
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 223
            CDSs (without protein)            :: 223
            Pseudo Genes (ambiguous residues) :: 0 of 223
            Pseudo Genes (frameshifted)       :: 104 of 223
            Pseudo Genes (incomplete)         :: 123 of 223
            Pseudo Genes (internal stop)      :: 27 of 223
            Pseudo Genes (multiple problems)  :: 26 of 223
            Pseudo Genes (short protein)      :: 1 of 223
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5168449
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E172"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGQA010000001-JBIGQA010000005
WGS_SCAFLD  NZ_JBIGQA010000001-NZ_JBIGQA010000005
//
LOCUS       NZ_JBIGMG010000000   5354253 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E333, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGMG000000000
VERSION     NZ_JBIGMG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130659
            Assembly: GCF_045571925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5354253)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGMG000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGMG000000000.  This version of the project
            (01) has the accession number NZ_JBIGMG010000000, and consists of
            sequences JBIGMG010000001-JBIGMG010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 225x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045571925.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:17:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,321
            CDSs (total)                      :: 5,205
            Genes (coding)                    :: 4,943
            CDSs (with protein)               :: 4,943
            Genes (RNA)                       :: 116
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 262
            CDSs (without protein)            :: 262
            Pseudo Genes (ambiguous residues) :: 0 of 262
            Pseudo Genes (frameshifted)       :: 157 of 262
            Pseudo Genes (incomplete)         :: 121 of 262
            Pseudo Genes (internal stop)      :: 27 of 262
            Pseudo Genes (multiple problems)  :: 40 of 262
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5354253
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E333"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGMG010000001-JBIGMG010000004
WGS_SCAFLD  NZ_JBIGMG010000001-NZ_JBIGMG010000004
//
LOCUS       NZ_JBIGQS010000000   5149877 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E146, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGQS000000000
VERSION     NZ_JBIGQS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130495
            Assembly: GCF_045574265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5149877)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGQS000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGQS000000000.  This version of the project
            (01) has the accession number NZ_JBIGQS010000000, and consists of
            sequences JBIGQS010000001-JBIGQS010000026.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 408x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045574265.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:49:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,048
            CDSs (total)                      :: 4,932
            Genes (coding)                    :: 4,612
            CDSs (with protein)               :: 4,612
            Genes (RNA)                       :: 116
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 320
            CDSs (without protein)            :: 320
            Pseudo Genes (ambiguous residues) :: 0 of 320
            Pseudo Genes (frameshifted)       :: 211 of 320
            Pseudo Genes (incomplete)         :: 121 of 320
            Pseudo Genes (internal stop)      :: 38 of 320
            Pseudo Genes (multiple problems)  :: 46 of 320
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5149877
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E146"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGQS010000001-JBIGQS010000026
WGS_SCAFLD  NZ_JBIGQS010000001-NZ_JBIGQS010000026
//
LOCUS       NZ_JBIGRR010000000   4779413 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E105, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGRR000000000
VERSION     NZ_JBIGRR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130458
            Assembly: GCF_045574805.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4779413)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGRR000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGRR000000000.  This version of the project
            (01) has the accession number NZ_JBIGRR010000000, and consists of
            sequences JBIGRR010000001-JBIGRR010000003.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 298x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045574805.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:42:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,635
            CDSs (total)                      :: 4,512
            Genes (coding)                    :: 4,358
            CDSs (with protein)               :: 4,358
            Genes (RNA)                       :: 123
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 15
            Pseudo Genes (total)              :: 154
            CDSs (without protein)            :: 154
            Pseudo Genes (ambiguous residues) :: 0 of 154
            Pseudo Genes (frameshifted)       :: 84 of 154
            Pseudo Genes (incomplete)         :: 63 of 154
            Pseudo Genes (internal stop)      :: 37 of 154
            Pseudo Genes (multiple problems)  :: 27 of 154
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4779413
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E105"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGRR010000001-JBIGRR010000003
WGS_SCAFLD  NZ_JBIGRR010000001-NZ_JBIGRR010000003
//
LOCUS       NZ_JBRXAE010000000   5092280 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Enterobacter hormaechei strain MEI3BC-21, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRXAE000000000
VERSION     NZ_JBRXAE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50713129
            Assembly: GCF_056155465.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 5092280)
  AUTHORS   Spahr,Y., Collaud,A. and Perreten,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2025) Institute of Veterinary Bacteriology,
            University of Bern, Laenggassstrasse 122, Bern 3012, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRXAE000000000.1.
            The Enterobacter hormaechei whole genome shotgun (WGS) project has
            the project accession NZ_JBRXAE000000000.  This version of the
            project (01) has the accession number NZ_JBRXAE010000000, and
            consists of sequences JBRXAE010000001-JBRXAE010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Autocycler v. 0.5.2; Polypolish v. 0.6.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 293.340729810615x
            Sequencing Technology  :: Oxford Nanopore MinION; Illumina NovaSeq
                                      6000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155465.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:34:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,953
            CDSs (total)                      :: 4,836
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 117
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 79
            CDSs (without protein)            :: 79
            Pseudo Genes (ambiguous residues) :: 0 of 79
            Pseudo Genes (frameshifted)       :: 25 of 79
            Pseudo Genes (incomplete)         :: 59 of 79
            Pseudo Genes (internal stop)      :: 13 of 79
            Pseudo Genes (multiple problems)  :: 14 of 79
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5092280
                     /organism="Enterobacter hormaechei"
                     /mol_type="genomic DNA"
                     /strain="MEI3BC-21"
                     /isolation_source="Soil surface"
                     /db_xref="taxon:158836"
                     /geo_loc_name="Switzerland: Bern"
                     /collection_date="2021-05"
                     /collected_by="Veterinary staff"
WGS         JBRXAE010000001-JBRXAE010000004
WGS_SCAFLD  NZ_CM149570
WGS_SCAFLD  NZ_JBRXAE010000002-NZ_JBRXAE010000004
//
LOCUS       NZ_JBRXAA010000000   5092279 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Enterobacter hormaechei strain MEI4BC-21, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRXAA000000000
VERSION     NZ_JBRXAA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50713133
            Assembly: GCF_056155385.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 5092279)
  AUTHORS   Spahr,Y., Collaud,A. and Perreten,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2025) Institute of Veterinary Bacteriology,
            University of Bern, Laenggassstrasse 122, Bern 3012, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRXAA000000000.1.
            The Enterobacter hormaechei whole genome shotgun (WGS) project has
            the project accession NZ_JBRXAA000000000.  This version of the
            project (01) has the accession number NZ_JBRXAA010000000, and
            consists of sequences JBRXAA010000001-JBRXAA010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Autocycler v. 0.5.2; Polypolish v. 0.6.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 195.738740748494x
            Sequencing Technology  :: Oxford Nanopore MinION; Illumina NovaSeq
                                      6000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155385.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:51:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,953
            CDSs (total)                      :: 4,836
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 117
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 79
            CDSs (without protein)            :: 79
            Pseudo Genes (ambiguous residues) :: 0 of 79
            Pseudo Genes (frameshifted)       :: 25 of 79
            Pseudo Genes (incomplete)         :: 59 of 79
            Pseudo Genes (internal stop)      :: 13 of 79
            Pseudo Genes (multiple problems)  :: 14 of 79
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5092279
                     /organism="Enterobacter hormaechei"
                     /mol_type="genomic DNA"
                     /strain="MEI4BC-21"
                     /isolation_source="Soil surface"
                     /db_xref="taxon:158836"
                     /geo_loc_name="Switzerland: Bern"
                     /collection_date="2021-05"
                     /collected_by="Veterinary staff"
WGS         JBRXAA010000001-JBRXAA010000004
WGS_SCAFLD  NZ_CM149566
WGS_SCAFLD  NZ_JBRXAA010000002-NZ_JBRXAA010000004
//
LOCUS       NZ_JBIGQL010000000   5509215 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E154, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGQL000000000
VERSION     NZ_JBIGQL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130503
            Assembly: GCF_045574125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5509215)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGQL000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGQL000000000.  This version of the project
            (01) has the accession number NZ_JBIGQL010000000, and consists of
            sequences JBIGQL010000001-JBIGQL010000012.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 310x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045574125.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:47:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,429
            CDSs (total)                      :: 5,302
            Genes (coding)                    :: 4,969
            CDSs (with protein)               :: 4,969
            Genes (RNA)                       :: 127
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 93
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 333
            CDSs (without protein)            :: 333
            Pseudo Genes (ambiguous residues) :: 0 of 333
            Pseudo Genes (frameshifted)       :: 182 of 333
            Pseudo Genes (incomplete)         :: 180 of 333
            Pseudo Genes (internal stop)      :: 44 of 333
            Pseudo Genes (multiple problems)  :: 65 of 333
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5509215
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E154"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGQL010000001-JBIGQL010000012
WGS_SCAFLD  NZ_JBIGQL010000001-NZ_JBIGQL010000012
//
LOCUS       NZ_JBIGOE010000000   4925712 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E261, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGOE000000000
VERSION     NZ_JBIGOE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130595
            Assembly: GCF_045572915.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4925712)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGOE000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGOE000000000.  This version of the project
            (01) has the accession number NZ_JBIGOE010000000, and consists of
            sequences JBIGOE010000001-JBIGOE010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 364x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045572915.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:41:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,806
            CDSs (total)                      :: 4,687
            Genes (coding)                    :: 4,513
            CDSs (with protein)               :: 4,513
            Genes (RNA)                       :: 119
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 89
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 174
            CDSs (without protein)            :: 174
            Pseudo Genes (ambiguous residues) :: 0 of 174
            Pseudo Genes (frameshifted)       :: 103 of 174
            Pseudo Genes (incomplete)         :: 82 of 174
            Pseudo Genes (internal stop)      :: 22 of 174
            Pseudo Genes (multiple problems)  :: 28 of 174
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4925712
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E261"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGOE010000001-JBIGOE010000004
WGS_SCAFLD  NZ_JBIGOE010000001-NZ_JBIGOE010000004
//
LOCUS       NZ_JBRXAF010000000   5247711 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Enterobacter hormaechei strain MEI3B-1023, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRXAF000000000
VERSION     NZ_JBRXAF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50713128
            Assembly: GCF_056155475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 5247711)
  AUTHORS   Spahr,Y., Collaud,A. and Perreten,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2025) Institute of Veterinary Bacteriology,
            University of Bern, Laenggassstrasse 122, Bern 3012, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRXAF000000000.1.
            The Enterobacter hormaechei whole genome shotgun (WGS) project has
            the project accession NZ_JBRXAF000000000.  This version of the
            project (01) has the accession number NZ_JBRXAF010000000, and
            consists of sequences JBRXAF010000001-JBRXAF010000005.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Autocycler v. 0.5.2; Polypolish v. 0.6.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 176.664351116963x
            Sequencing Technology  :: Oxford Nanopore MinION; Illumina NovaSeq
                                      6000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155475.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:41:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,179
            CDSs (total)                      :: 5,061
            Genes (coding)                    :: 4,961
            CDSs (with protein)               :: 4,961
            Genes (RNA)                       :: 118
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 25 of 100
            Pseudo Genes (incomplete)         :: 78 of 100
            Pseudo Genes (internal stop)      :: 15 of 100
            Pseudo Genes (multiple problems)  :: 14 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5247711
                     /organism="Enterobacter hormaechei"
                     /mol_type="genomic DNA"
                     /strain="MEI3B-1023"
                     /isolation_source="Soil surface"
                     /db_xref="taxon:158836"
                     /geo_loc_name="Switzerland: Bern"
                     /collection_date="2023-10"
                     /collected_by="Veterinary staff"
WGS         JBRXAF010000001-JBRXAF010000005
WGS_SCAFLD  NZ_CM149571
WGS_SCAFLD  NZ_JBRXAF010000002-NZ_JBRXAF010000005
//
LOCUS       NZ_JBRWZR010000000   5024933 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Enterobacter hormaechei strain MEI61O-22, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWZR000000000
VERSION     NZ_JBRWZR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50713142
            Assembly: GCF_056155205.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 5024933)
  AUTHORS   Spahr,Y., Collaud,A. and Perreten,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2025) Institute of Veterinary Bacteriology,
            University of Bern, Laenggassstrasse 122, Bern 3012, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWZR000000000.1.
            The Enterobacter hormaechei whole genome shotgun (WGS) project has
            the project accession NZ_JBRWZR000000000.  This version of the
            project (01) has the accession number NZ_JBRWZR010000000, and
            consists of sequences JBRWZR010000001-JBRWZR010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Autocycler v. 0.5.2; Polypolish v. 0.6.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 308.390069240724x
            Sequencing Technology  :: Oxford Nanopore MinION; Illumina NovaSeq
                                      6000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155205.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:28:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,962
            CDSs (total)                      :: 4,844
            Genes (coding)                    :: 4,771
            CDSs (with protein)               :: 4,771
            Genes (RNA)                       :: 118
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 73
            CDSs (without protein)            :: 73
            Pseudo Genes (ambiguous residues) :: 0 of 73
            Pseudo Genes (frameshifted)       :: 20 of 73
            Pseudo Genes (incomplete)         :: 55 of 73
            Pseudo Genes (internal stop)      :: 11 of 73
            Pseudo Genes (multiple problems)  :: 10 of 73
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5024933
                     /organism="Enterobacter hormaechei"
                     /mol_type="genomic DNA"
                     /strain="MEI61O-22"
                     /isolation_source="Soil surface"
                     /db_xref="taxon:158836"
                     /geo_loc_name="Switzerland: Bern"
                     /collection_date="2022-06"
                     /collected_by="Veterinary staff"
WGS         JBRWZR010000001-JBRWZR010000004
WGS_SCAFLD  NZ_CM149557
WGS_SCAFLD  NZ_JBRWZR010000002-NZ_JBRWZR010000004
//
LOCUS       NZ_JBSAXG010000000   4666752 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Enterobacter kobei strain B2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSAXG000000000
VERSION     NZ_JBSAXG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50273546
            Assembly: GCF_056156765.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter kobei
  ORGANISM  Enterobacter kobei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 4666752)
  AUTHORS   Knecht,C.A., Prack Mccormick,B., Alvarez,V.E., Buzzola,F.,
            Fuchs,J., Salgado,P., Campos,J., Quiroga,M.P. and Centron,D.
  TITLE     The use of glyphosate in agriculture contributes to the rise of
            species causing multidrug hospital-acquired infections
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4666752)
  AUTHORS   Knecht,C.A., Campos,J., Alvarez,V.E., Quiroga,M.P. and Centron,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JUL-2025) Institute of Research in Medical
            Microbiology and Parasitology, Universidad de Buenos Aires,
            CONICET, Paraguay 2155, Buenos Aires 1121, Argentina
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSAXG000000000.1.
            The Enterobacter kobei whole genome shotgun (WGS) project has the
            project accession NZ_JBSAXG000000000.  This version of the project
            (01) has the accession number NZ_JBSAXG010000000, and consists of
            sequences JBSAXG010000001-JBSAXG010000034.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 397x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056156765.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:28:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,456
            CDSs (total)                      :: 4,375
            Genes (coding)                    :: 4,331
            CDSs (with protein)               :: 4,331
            Genes (RNA)                       :: 81
            rRNAs                             :: 1, 2 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 73
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 44
            CDSs (without protein)            :: 44
            Pseudo Genes (ambiguous residues) :: 0 of 44
            Pseudo Genes (frameshifted)       :: 26 of 44
            Pseudo Genes (incomplete)         :: 29 of 44
            Pseudo Genes (internal stop)      :: 10 of 44
            Pseudo Genes (multiple problems)  :: 16 of 44
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4666752
                     /organism="Enterobacter kobei"
                     /mol_type="genomic DNA"
                     /strain="B2"
                     /isolation_source="sediment"
                     /db_xref="taxon:208224"
                     /geo_loc_name="Argentina: Ramsar site at the Parana Delta"
                     /lat_lon="34.2228988 S 58.8975770 W"
                     /collection_date="2018-11"
WGS         JBSAXG010000001-JBSAXG010000034
WGS_SCAFLD  NZ_JBSAXG010000001-NZ_JBSAXG010000034
//
LOCUS       NZ_JBRWZW010000000   5094651 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Enterobacter hormaechei strain MEI5C-21, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWZW000000000
VERSION     NZ_JBRWZW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50713137
            Assembly: GCF_056155285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 5094651)
  AUTHORS   Spahr,Y., Collaud,A. and Perreten,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2025) Institute of Veterinary Bacteriology,
            University of Bern, Laenggassstrasse 122, Bern 3012, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWZW000000000.1.
            The Enterobacter hormaechei whole genome shotgun (WGS) project has
            the project accession NZ_JBRWZW000000000.  This version of the
            project (01) has the accession number NZ_JBRWZW010000000, and
            consists of sequences JBRWZW010000001-JBRWZW010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Autocycler v. 0.5.2; Polypolish v. 0.6.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 278.551492068427x
            Sequencing Technology  :: Oxford Nanopore MinION; Illumina NovaSeq
                                      6000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155285.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:35:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,961
            CDSs (total)                      :: 4,844
            Genes (coding)                    :: 4,764
            CDSs (with protein)               :: 4,764
            Genes (RNA)                       :: 117
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 80
            CDSs (without protein)            :: 80
            Pseudo Genes (ambiguous residues) :: 0 of 80
            Pseudo Genes (frameshifted)       :: 25 of 80
            Pseudo Genes (incomplete)         :: 60 of 80
            Pseudo Genes (internal stop)      :: 13 of 80
            Pseudo Genes (multiple problems)  :: 14 of 80
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5094651
                     /organism="Enterobacter hormaechei"
                     /mol_type="genomic DNA"
                     /strain="MEI5C-21"
                     /isolation_source="Soil surface"
                     /db_xref="taxon:158836"
                     /geo_loc_name="Switzerland: Bern"
                     /collection_date="2021-05"
                     /collected_by="Veterinary staff"
WGS         JBRWZW010000001-JBRWZW010000004
WGS_SCAFLD  NZ_CM149561
WGS_SCAFLD  NZ_JBRWZW010000002-NZ_JBRWZW010000004
//
LOCUS       NZ_JBRWZT010000000   5090729 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Enterobacter hormaechei strain MEI37C-21, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWZT000000000
VERSION     NZ_JBRWZT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50713140
            Assembly: GCF_056155225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 5090729)
  AUTHORS   Spahr,Y., Collaud,A. and Perreten,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2025) Institute of Veterinary Bacteriology,
            University of Bern, Laenggassstrasse 122, Bern 3012, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWZT000000000.1.
            The Enterobacter hormaechei whole genome shotgun (WGS) project has
            the project accession NZ_JBRWZT000000000.  This version of the
            project (01) has the accession number NZ_JBRWZT010000000, and
            consists of sequences JBRWZT010000001-JBRWZT010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Autocycler v. 0.5.2; Polypolish v. 0.6.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 189.642550450163x
            Sequencing Technology  :: Oxford Nanopore MinION; Illumina NovaSeq
                                      6000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155225.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:45:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,953
            CDSs (total)                      :: 4,836
            Genes (coding)                    :: 4,758
            CDSs (with protein)               :: 4,758
            Genes (RNA)                       :: 117
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 78
            CDSs (without protein)            :: 78
            Pseudo Genes (ambiguous residues) :: 0 of 78
            Pseudo Genes (frameshifted)       :: 25 of 78
            Pseudo Genes (incomplete)         :: 58 of 78
            Pseudo Genes (internal stop)      :: 13 of 78
            Pseudo Genes (multiple problems)  :: 14 of 78
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5090729
                     /organism="Enterobacter hormaechei"
                     /mol_type="genomic DNA"
                     /strain="MEI37C-21"
                     /isolation_source="Soil surface"
                     /db_xref="taxon:158836"
                     /geo_loc_name="Switzerland: Bern"
                     /collection_date="2021-05"
                     /collected_by="Veterinary staff"
WGS         JBRWZT010000001-JBRWZT010000004
WGS_SCAFLD  NZ_CM149559
WGS_SCAFLD  NZ_JBRWZT010000002-NZ_JBRWZT010000004
//
LOCUS       NZ_JBRWZV010000000   5135790 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Enterobacter hormaechei strain MEI7BC-21, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWZV000000000
VERSION     NZ_JBRWZV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50713138
            Assembly: GCF_056155295.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 5135790)
  AUTHORS   Spahr,Y., Collaud,A. and Perreten,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2025) Institute of Veterinary Bacteriology,
            University of Bern, Laenggassstrasse 122, Bern 3012, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWZV000000000.1.
            The Enterobacter hormaechei whole genome shotgun (WGS) project has
            the project accession NZ_JBRWZV000000000.  This version of the
            project (01) has the accession number NZ_JBRWZV010000000, and
            consists of sequences JBRWZV010000001-JBRWZV010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Autocycler v. 0.5.2; Polypolish v. 0.6.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 113.083811838101x
            Sequencing Technology  :: Oxford Nanopore MinION; Illumina NovaSeq
                                      6000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155295.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:43:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,029
            CDSs (total)                      :: 4,912
            Genes (coding)                    :: 4,821
            CDSs (with protein)               :: 4,821
            Genes (RNA)                       :: 117
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 91
            CDSs (without protein)            :: 91
            Pseudo Genes (ambiguous residues) :: 0 of 91
            Pseudo Genes (frameshifted)       :: 35 of 91
            Pseudo Genes (incomplete)         :: 61 of 91
            Pseudo Genes (internal stop)      :: 13 of 91
            Pseudo Genes (multiple problems)  :: 14 of 91
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5135790
                     /organism="Enterobacter hormaechei"
                     /mol_type="genomic DNA"
                     /strain="MEI7BC-21"
                     /isolation_source="Soil surface"
                     /db_xref="taxon:158836"
                     /geo_loc_name="Switzerland: Bern"
                     /collection_date="2021-05"
                     /collected_by="Veterinary staff"
WGS         JBRWZV010000001-JBRWZV010000004
WGS_SCAFLD  NZ_CM149562
WGS_SCAFLD  NZ_JBRWZV010000002-NZ_JBRWZV010000004
//
LOCUS       NZ_JBRXAV010000000   4712935 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Enterobacter hormaechei strain 12YS-O, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRXAV000000000
VERSION     NZ_JBRXAV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50713112
            Assembly: GCF_056157925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 4712935)
  AUTHORS   Spahr,Y., Collaud,A. and Perreten,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2025) Institute of Veterinary Bacteriology,
            University of Bern, Laenggassstrasse 122, Bern 3012, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRXAV000000000.1.
            The Enterobacter hormaechei whole genome shotgun (WGS) project has
            the project accession NZ_JBRXAV000000000.  This version of the
            project (01) has the accession number NZ_JBRXAV010000000, and
            consists of sequences JBRXAV010000001-JBRXAV010000003.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Autocycler v. 0.5.2; Polypolish v. 0.6.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 278.691978850515x
            Sequencing Technology  :: Oxford Nanopore MinION; Illumina NovaSeq
                                      6000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157925.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:22:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,498
            CDSs (total)                      :: 4,382
            Genes (coding)                    :: 4,347
            CDSs (with protein)               :: 4,347
            Genes (RNA)                       :: 116
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 13 of 35
            Pseudo Genes (incomplete)         :: 25 of 35
            Pseudo Genes (internal stop)      :: 5 of 35
            Pseudo Genes (multiple problems)  :: 7 of 35
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4712935
                     /organism="Enterobacter hormaechei"
                     /mol_type="genomic DNA"
                     /strain="12YS-O"
                     /isolation_source="Soil surface"
                     /db_xref="taxon:158836"
                     /geo_loc_name="Switzerland: Bern"
                     /collection_date="2024-08"
                     /collected_by="Veterinary staff"
WGS         JBRXAV010000001-JBRXAV010000003
WGS_SCAFLD  NZ_CM149602
WGS_SCAFLD  NZ_JBRXAV010000002-NZ_JBRXAV010000003
//
LOCUS       NZ_JBRXAS010000000   5131325 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Enterobacter hormaechei strain MEI1BC-21, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRXAS000000000
VERSION     NZ_JBRXAS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50713115
            Assembly: GCF_056157865.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 5131325)
  AUTHORS   Spahr,Y., Collaud,A. and Perreten,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2025) Institute of Veterinary Bacteriology,
            University of Bern, Laenggassstrasse 122, Bern 3012, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRXAS000000000.1.
            The Enterobacter hormaechei whole genome shotgun (WGS) project has
            the project accession NZ_JBRXAS000000000.  This version of the
            project (01) has the accession number NZ_JBRXAS010000000, and
            consists of sequences JBRXAS010000001-JBRXAS010000006.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Autocycler v. 0.5.2; Polypolish v. 0.6.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 224.882682250686x
            Sequencing Technology  :: Oxford Nanopore MinION; Illumina NovaSeq
                                      6000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157865.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:30:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,011
            CDSs (total)                      :: 4,894
            Genes (coding)                    :: 4,814
            CDSs (with protein)               :: 4,814
            Genes (RNA)                       :: 117
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 80
            CDSs (without protein)            :: 80
            Pseudo Genes (ambiguous residues) :: 0 of 80
            Pseudo Genes (frameshifted)       :: 25 of 80
            Pseudo Genes (incomplete)         :: 60 of 80
            Pseudo Genes (internal stop)      :: 13 of 80
            Pseudo Genes (multiple problems)  :: 14 of 80
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5131325
                     /organism="Enterobacter hormaechei"
                     /mol_type="genomic DNA"
                     /strain="MEI1BC-21"
                     /isolation_source="Soil surface"
                     /db_xref="taxon:158836"
                     /geo_loc_name="Switzerland: Bern"
                     /collection_date="2021-05"
                     /collected_by="Veterinary staff"
WGS         JBRXAS010000001-JBRXAS010000006
WGS_SCAFLD  NZ_CM149599
WGS_SCAFLD  NZ_JBRXAS010000002-NZ_JBRXAS010000006
//
LOCUS       NZ_JBRXAK010000000   5093874 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Enterobacter hormaechei strain MEI2BC-21, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRXAK000000000
VERSION     NZ_JBRXAK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50713123
            Assembly: GCF_056157805.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 5093874)
  AUTHORS   Spahr,Y., Collaud,A. and Perreten,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2025) Institute of Veterinary Bacteriology,
            University of Bern, Laenggassstrasse 122, Bern 3012, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRXAK000000000.1.
            The Enterobacter hormaechei whole genome shotgun (WGS) project has
            the project accession NZ_JBRXAK000000000.  This version of the
            project (01) has the accession number NZ_JBRXAK010000000, and
            consists of sequences JBRXAK010000001-JBRXAK010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Autocycler v. 0.5.2; Polypolish v. 0.6.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 259.754388506665x
            Sequencing Technology  :: Oxford Nanopore MinION; Illumina NovaSeq
                                      6000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157805.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:36:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,958
            CDSs (total)                      :: 4,841
            Genes (coding)                    :: 4,760
            CDSs (with protein)               :: 4,760
            Genes (RNA)                       :: 117
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 25 of 81
            Pseudo Genes (incomplete)         :: 60 of 81
            Pseudo Genes (internal stop)      :: 14 of 81
            Pseudo Genes (multiple problems)  :: 14 of 81
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5093874
                     /organism="Enterobacter hormaechei"
                     /mol_type="genomic DNA"
                     /strain="MEI2BC-21"
                     /isolation_source="Soil surface"
                     /db_xref="taxon:158836"
                     /geo_loc_name="Switzerland: Bern"
                     /collection_date="2021-05"
                     /collected_by="Veterinary staff"
WGS         JBRXAK010000001-JBRXAK010000004
WGS_SCAFLD  NZ_CM149596
WGS_SCAFLD  NZ_JBRXAK010000002-NZ_JBRXAK010000004
//
LOCUS       NZ_LGIV01000000      4766022 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Enterobacter ludwigii strain AOUC-8/14, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LGIV00000000
VERSION     NZ_LGIV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03861996
            Assembly: GCF_001263115.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter ludwigii
  ORGANISM  Enterobacter ludwigii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 4766022)
  AUTHORS   Antonelli,A., D'Andrea,M.M., Di Pilato,V., Viaggi,B., Torricelli,F.
            and Rossolini,G.M.
  TITLE     Characterization of a Novel Putative Xer-Dependent Integrative
            Mobile Element Carrying the bla(NMC-A) Carbapenemase Gene, Inserted
            into the Chromosome of Members of the Enterobacter cloacae Complex
  JOURNAL   Antimicrob Agents Chemother 59 (10), 6620-6624 (2015)
   PUBMED   26248383
REFERENCE   2  (bases 1 to 4766022)
  AUTHORS   Antonelli,A., D'Andrea,M.M., Di Pilato,V., Viaggi,B., Torricelli,F.
            and Rossolini,G.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JUL-2015) Department of Medical Biotechnologies,
            University of Siena, Viale Bracci 2, Siena 53100, Italy
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LGIV00000000.1.
            The Enterobacter ludwigii whole genome shotgun (WGS) project has
            the project accession NZ_LGIV00000000.  This version of the project
            (01) has the accession number NZ_LGIV01000000, and consists of
            sequences LGIV01000001-LGIV01000015.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2015
            Assembly Method        :: A5-miseq v. 20140604
            Assembly Name          :: EntNMC_A5miseq
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 80.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001263115.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:52:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,580
            CDSs (total)                      :: 4,473
            Genes (coding)                    :: 4,424
            CDSs (with protein)               :: 4,424
            Genes (RNA)                       :: 107
            rRNAs                             :: 9, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 1 (5S, 23S)
            partial rRNAs                     :: 7, 6 (16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 18 of 49
            Pseudo Genes (incomplete)         :: 37 of 49
            Pseudo Genes (internal stop)      :: 9 of 49
            Pseudo Genes (multiple problems)  :: 10 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4766022
                     /organism="Enterobacter ludwigii"
                     /mol_type="genomic DNA"
                     /strain="AOUC-8/14"
                     /isolation_source="rectal swab from female"
                     /host="Homo sapiens"
                     /db_xref="taxon:299767"
                     /geo_loc_name="Italy: Careggi University Hospital,
                     Careggi, Florence"
                     /lat_lon="43.8051 N 11.2548 E"
                     /collection_date="2014-08-29"
WGS         LGIV01000001-LGIV01000015
WGS_SCAFLD  NZ_LGIV01000001-NZ_LGIV01000015
//
LOCUS       NZ_JYME01000000      4658903 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Enterobacter kobei strain MNCRE12, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JYME00000000
VERSION     NZ_JYME00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03333155
            Assembly: GCF_000952375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter kobei
  ORGANISM  Enterobacter kobei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 4658903)
  AUTHORS   Hargreaves,M.L., Shaw,K.M., Dobbins,G., Snippes Vagnone,P.M.,
            Harper,J.E., Boxrud,D., Lynfield,R., Aziz,M., Price,L.B.,
            Silverstein,K.A., Danzeisen,J.L., Youmans,B., Case,K.,
            Sreevatsan,S. and Johnson,T.J.
  TITLE     Clonal Dissemination of Enterobacter cloacae Harboring blaKPC-3 in
            the Upper Midwestern United States
  JOURNAL   Antimicrob Agents Chemother 59 (12), 7723-7734 (2015)
   PUBMED   26438492
REFERENCE   2  (bases 1 to 4658903)
  AUTHORS   Johnson,T., Danzeisen,J., Hargreaves,M., Shaw,K., Snippes,P.,
            Silverstein,K. and Youmans,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-FEB-2015) Veterinary and Biomedical Sciences,
            University of Minnesota, 1971 Commonwealth Ave., 205 Veterinary
            Science, Saint Paul, MN 55108, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JYME00000000.1.
            The Enterobacter kobei whole genome shotgun (WGS) project has the
            project accession NZ_JYME00000000.  This version of the project
            (01) has the accession number NZ_JYME01000000, and consists of
            sequences JYME01000001-JYME01000056.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            The organism was changed from 'Enterobacter cloacae' to
            'Enterobacter kobei' in January 2019.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_000952375.1
            Current Name        :: Enterobacter kobei
            Previous Name       :: Enterobacter cloacae
            Date Updated        :: 2019-01-07
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. TYPE genome for current name
            A1 Genome (subject) :: GCA_001729765.1
            A1 Name             :: Enterobacter kobei
            A1 ANI              :: 99.38876%
            A1 Query Coverage   :: 91.36%
            A1 Subject Coverage :: 86.38%
            Analysis 2 (A2)     :: Query vs. TYPE genome for previous name
            A2 Genome (subject) :: GCA_001997105.1
            A2 Name             :: Enterobacter cloacae
            A2 ANI              :: 88.31485%
            A2 Query Coverage   :: 84.65%
            A2 Subject Coverage :: 72.28%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: JUN-2014
            Assembly Method        :: CLC Genomics Workbench v. JUNE-2014
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000952375.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:54:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,456
            CDSs (total)                      :: 4,368
            Genes (coding)                    :: 4,320
            CDSs (with protein)               :: 4,320
            Genes (RNA)                       :: 88
            rRNAs                             :: 5, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 75
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 48
            CDSs (without protein)            :: 48
            Pseudo Genes (ambiguous residues) :: 0 of 48
            Pseudo Genes (frameshifted)       :: 15 of 48
            Pseudo Genes (incomplete)         :: 34 of 48
            Pseudo Genes (internal stop)      :: 7 of 48
            Pseudo Genes (multiple problems)  :: 7 of 48
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4658903
                     /organism="Enterobacter kobei"
                     /mol_type="genomic DNA"
                     /strain="MNCRE12"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:208224"
                     /geo_loc_name="USA: Minnesota"
                     /lat_lon="46 N 94 W"
                     /collection_date="2010"
                     /note="Health care-associated"
WGS         JYME01000001-JYME01000056
WGS_SCAFLD  NZ_JYME01000001-NZ_JYME01000056
//
LOCUS       NZ_JBMVIK010000000   4770917 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Enterobacter mori strain EBC7, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBMVIK000000000
VERSION     NZ_JBMVIK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44407724
            Assembly: GCF_056171755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter mori
  ORGANISM  Enterobacter mori
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter.
REFERENCE   1  (bases 1 to 4770917)
  AUTHORS   Kanhirun,N., Blanc,A., Aindow,A., You,M., Antani,J.D., Ghatbale,P.,
            Leonard,J., Garcia,A.G., Nghiem,K., Whiteson,K., Schooley,R.T.,
            Turner,P.E., Pogliano,J., Cobian Guemes,A. and Pride,D.T.
  TITLE     Identification of a large cohort of jumbo phages on an Enterobacter
            host that have broad host ranges across pathogenic
            Gammaproteobacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4770917)
  AUTHORS   Kanhirun,N., Blanc,A., Aindow,A., You,M., Antani,J.D., Ghatbale,P.,
            Leonard,J., Garcia,A.G., Nghiem,K., Whiteson,K., Schooley,R.T.,
            Turner,P.E., Pogliano,J., Cobian Guemes,A. and Pride,D.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-OCT-2024) Pathology, University of California, San
            Diego, 9500 Gilman Dr., La Jolla, CA 92093, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBMVIK000000000.1.
            The Enterobacter mori whole genome shotgun (WGS) project has the
            project accession NZ_JBMVIK000000000.  This version of the project
            (01) has the accession number NZ_JBMVIK010000000, and consists of
            sequences JBMVIK010000001-JBMVIK010000026.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 83.72x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056171755.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:02:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,525
            CDSs (total)                      :: 4,444
            Genes (coding)                    :: 4,394
            CDSs (with protein)               :: 4,394
            Genes (RNA)                       :: 81
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 71
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 20 of 50
            Pseudo Genes (incomplete)         :: 37 of 50
            Pseudo Genes (internal stop)      :: 8 of 50
            Pseudo Genes (multiple problems)  :: 13 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4770917
                     /organism="Enterobacter mori"
                     /mol_type="genomic DNA"
                     /strain="EBC7"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:539813"
                     /geo_loc_name="USA: California"
                     /lat_lon="32.7157 N 117.1611 W"
                     /collection_date="2019-10-27"
                     /collected_by="UCSD"
WGS         JBMVIK010000001-JBMVIK010000026
WGS_SCAFLD  NZ_JBMVIK010000001-NZ_JBMVIK010000026
//
LOCUS       NZ_JBMVIL010000000   4757310 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Enterobacter hormaechei strain EBC3, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBMVIL000000000
VERSION     NZ_JBMVIL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44407723
            Assembly: GCF_056171785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 4757310)
  AUTHORS   Kanhirun,N., Blanc,A., Aindow,A., You,M., Antani,J.D., Ghatbale,P.,
            Leonard,J., Garcia,A.G., Nghiem,K., Whiteson,K., Schooley,R.T.,
            Turner,P.E., Pogliano,J., Cobian Guemes,A. and Pride,D.T.
  TITLE     Identification of a large cohort of jumbo phages on an Enterobacter
            host that have broad host ranges across pathogenic
            Gammaproteobacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4757310)
  AUTHORS   Kanhirun,N., Blanc,A., Aindow,A., You,M., Antani,J.D., Ghatbale,P.,
            Leonard,J., Garcia,A.G., Nghiem,K., Whiteson,K., Schooley,R.T.,
            Turner,P.E., Pogliano,J., Cobian Guemes,A. and Pride,D.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-OCT-2024) Pathology, University of California, San
            Diego, 9500 Gilman Dr., La Jolla, CA 92093, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBMVIL000000000.1.
            The Enterobacter hormaechei whole genome shotgun (WGS) project has
            the project accession NZ_JBMVIL000000000.  This version of the
            project (01) has the accession number NZ_JBMVIL010000000, and
            consists of sequences JBMVIL010000001-JBMVIL010000074.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 87.38x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056171785.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:55:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,650
            CDSs (total)                      :: 4,569
            Genes (coding)                    :: 4,501
            CDSs (with protein)               :: 4,501
            Genes (RNA)                       :: 81
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 23 of 68
            Pseudo Genes (incomplete)         :: 40 of 68
            Pseudo Genes (internal stop)      :: 16 of 68
            Pseudo Genes (multiple problems)  :: 9 of 68
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4757310
                     /organism="Enterobacter hormaechei"
                     /mol_type="genomic DNA"
                     /strain="EBC3"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:158836"
                     /geo_loc_name="USA: California"
                     /lat_lon="32.7157 N 117.1611 W"
                     /collection_date="2019-10-28"
                     /collected_by="UCSD"
WGS         JBMVIL010000001-JBMVIL010000074
WGS_SCAFLD  NZ_JBMVIL010000001-NZ_JBMVIL010000074
//
LOCUS       NZ_JBRXAO010000000   5210206 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain MEI2A-0323, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBRXAO000000000
VERSION     NZ_JBRXAO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50713119
            Assembly: GCF_056155585.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5210206)
  AUTHORS   Spahr,Y., Collaud,A. and Perreten,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2025) Institute of Veterinary Bacteriology,
            University of Bern, Laenggassstrasse 122, Bern 3012, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRXAO000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBRXAO000000000.  This version of the project
            (01) has the accession number NZ_JBRXAO010000000, and consists of
            sequences JBRXAO010000001-JBRXAO010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Autocycler v. 0.5.2; Polypolish v. 0.6.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 337.715829662013x
            Sequencing Technology  :: Oxford Nanopore MinION; Illumina NovaSeq
                                      6000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155585.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:32:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,067
            CDSs (total)                      :: 4,950
            Genes (coding)                    :: 4,729
            CDSs (with protein)               :: 4,729
            Genes (RNA)                       :: 117
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 221
            CDSs (without protein)            :: 221
            Pseudo Genes (ambiguous residues) :: 0 of 221
            Pseudo Genes (frameshifted)       :: 110 of 221
            Pseudo Genes (incomplete)         :: 139 of 221
            Pseudo Genes (internal stop)      :: 54 of 221
            Pseudo Genes (multiple problems)  :: 73 of 221
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5210206
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="MEI2A-0323"
                     /isolation_source="Soil surface"
                     /db_xref="taxon:562"
                     /geo_loc_name="Switzerland: Bern"
                     /collection_date="2023-03"
                     /collected_by="Veterinary staff"
WGS         JBRXAO010000001-JBRXAO010000002
WGS_SCAFLD  NZ_CM149575
WGS_SCAFLD  NZ_JBRXAO010000002
//
LOCUS       NZ_JBRKTY010000000   4614403 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 574_LAEV, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBRKTY000000000
VERSION     NZ_JBRKTY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52211351
            Assembly: GCF_056155965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4614403)
  AUTHORS   Zanon,I.P. and Silva,R.O.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-OCT-2025) Department of Preventive Veterinary
            Medicine, Federal University of Minas Gerais, Avenida Antonio
            Carlos, Belo Horizonte, Minas Gerais 31270901, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRKTY000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBRKTY000000000.  This version of the project
            (01) has the accession number NZ_JBRKTY010000000, and consists of
            sequences JBRKTY010000001-JBRKTY010000124.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 101.34x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155965.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:23:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,562
            CDSs (total)                      :: 4,471
            Genes (coding)                    :: 4,290
            CDSs (with protein)               :: 4,290
            Genes (RNA)                       :: 91
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 181
            CDSs (without protein)            :: 181
            Pseudo Genes (ambiguous residues) :: 0 of 181
            Pseudo Genes (frameshifted)       :: 53 of 181
            Pseudo Genes (incomplete)         :: 116 of 181
            Pseudo Genes (internal stop)      :: 37 of 181
            Pseudo Genes (multiple problems)  :: 24 of 181
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4614403
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="574_LAEV"
                     /isolation_source="Carcasses"
                     /host="Gallus gallus domesticus"
                     /db_xref="taxon:562"
                     /geo_loc_name="Brazil: Minas Gerais"
                     /collection_date="2024"
                     /collected_by="LAEV - UFMG"
WGS         JBRKTY010000001-JBRKTY010000124
WGS_SCAFLD  NZ_JBRKTY010000001-NZ_JBRKTY010000124
//
LOCUS       NZ_JBIXEA010000000   4998920 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1082, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXEA000000000
VERSION     NZ_JBIXEA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247249
            Assembly: GCF_045621005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4998920)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXEA000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXEA000000000.  This version of the project
            (01) has the accession number NZ_JBIXEA010000000, and consists of
            sequences JBIXEA010000001-JBIXEA010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 642x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045621005.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:45:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,860
            CDSs (total)                      :: 4,736
            Genes (coding)                    :: 4,509
            CDSs (with protein)               :: 4,509
            Genes (RNA)                       :: 124
            rRNAs                             :: 8, 8, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 227
            CDSs (without protein)            :: 227
            Pseudo Genes (ambiguous residues) :: 0 of 227
            Pseudo Genes (frameshifted)       :: 119 of 227
            Pseudo Genes (incomplete)         :: 108 of 227
            Pseudo Genes (internal stop)      :: 38 of 227
            Pseudo Genes (multiple problems)  :: 36 of 227
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4998920
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1082"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXEA010000001-JBIXEA010000005
WGS_SCAFLD  NZ_JBIXEA010000001-NZ_JBIXEA010000005
//
LOCUS       NZ_JBRXAI010000000   5135103 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain MEI2O1-23, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBRXAI000000000
VERSION     NZ_JBRXAI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50713125
            Assembly: GCF_056155535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5135103)
  AUTHORS   Spahr,Y., Collaud,A. and Perreten,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2025) Institute of Veterinary Bacteriology,
            University of Bern, Laenggassstrasse 122, Bern 3012, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRXAI000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBRXAI000000000.  This version of the project
            (01) has the accession number NZ_JBRXAI010000000, and consists of
            sequences JBRXAI010000001-JBRXAI010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Autocycler v. 0.5.2; Polypolish v. 0.6.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 188.047643679202x
            Sequencing Technology  :: Oxford Nanopore MinION; Illumina NovaSeq
                                      6000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155535.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:35:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,058
            CDSs (total)                      :: 4,935
            Genes (coding)                    :: 4,794
            CDSs (with protein)               :: 4,794
            Genes (RNA)                       :: 123
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 90
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 141
            CDSs (without protein)            :: 141
            Pseudo Genes (ambiguous residues) :: 0 of 141
            Pseudo Genes (frameshifted)       :: 50 of 141
            Pseudo Genes (incomplete)         :: 87 of 141
            Pseudo Genes (internal stop)      :: 27 of 141
            Pseudo Genes (multiple problems)  :: 22 of 141
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5135103
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="MEI2O1-23"
                     /isolation_source="Soil surface"
                     /db_xref="taxon:562"
                     /geo_loc_name="Switzerland: Bern"
                     /collection_date="2023-01"
                     /collected_by="Veterinary staff"
WGS         JBRXAI010000001-JBRXAI010000004
WGS_SCAFLD  NZ_CM149574
WGS_SCAFLD  NZ_JBRXAI010000002-NZ_JBRXAI010000004
//
LOCUS       NZ_JBRXAU010000000   5055482 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain MEI1A-0323, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBRXAU000000000
VERSION     NZ_JBRXAU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50713113
            Assembly: GCF_056157895.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5055482)
  AUTHORS   Spahr,Y., Collaud,A. and Perreten,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2025) Institute of Veterinary Bacteriology,
            University of Bern, Laenggassstrasse 122, Bern 3012, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRXAU000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBRXAU000000000.  This version of the project
            (01) has the accession number NZ_JBRXAU010000000, and consists of
            sequences JBRXAU010000001-JBRXAU010000003.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Autocycler v. 0.5.2; Polypolish v. 0.6.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 479.577987692961x
            Sequencing Technology  :: Oxford Nanopore MinION; Illumina NovaSeq
                                      6000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157895.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:26:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,959
            CDSs (total)                      :: 4,836
            Genes (coding)                    :: 4,699
            CDSs (with protein)               :: 4,699
            Genes (RNA)                       :: 123
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 90
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 137
            CDSs (without protein)            :: 137
            Pseudo Genes (ambiguous residues) :: 0 of 137
            Pseudo Genes (frameshifted)       :: 48 of 137
            Pseudo Genes (incomplete)         :: 84 of 137
            Pseudo Genes (internal stop)      :: 27 of 137
            Pseudo Genes (multiple problems)  :: 21 of 137
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5055482
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="MEI1A-0323"
                     /isolation_source="Soil surface"
                     /db_xref="taxon:562"
                     /geo_loc_name="Switzerland: Bern"
                     /collection_date="2023-03"
                     /collected_by="Veterinary staff"
WGS         JBRXAU010000001-JBRXAU010000003
WGS_SCAFLD  NZ_CM149601
WGS_SCAFLD  NZ_JBRXAU010000002-NZ_JBRXAU010000003
//
LOCUS       NZ_JBIRAH010000000   5065974 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain BTF18T2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIRAH000000000
VERSION     NZ_JBIRAH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44467139
            Assembly: GCF_056153905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5065974)
  AUTHORS   Reasoner,S.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JAN-2025) Department of Pathology, Microbiology and
            Immunology, Vanderbilt University Medical Center, 1211 21st Avenue
            South, Nashville, TN 37212, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIRAH000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIRAH000000000.  This version of the project
            (01) has the accession number NZ_JBIRAH010000000, and consists of
            sequences JBIRAH010000001-JBIRAH010000096.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 148x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056153905.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:04:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,063
            CDSs (total)                      :: 4,975
            Genes (coding)                    :: 4,769
            CDSs (with protein)               :: 4,769
            Genes (RNA)                       :: 88
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 206
            CDSs (without protein)            :: 206
            Pseudo Genes (ambiguous residues) :: 0 of 206
            Pseudo Genes (frameshifted)       :: 72 of 206
            Pseudo Genes (incomplete)         :: 156 of 206
            Pseudo Genes (internal stop)      :: 33 of 206
            Pseudo Genes (multiple problems)  :: 47 of 206
            Pseudo Genes (short protein)      :: 1 of 206
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5065974
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="BTF18T2"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA: Nashville, TN"
                     /lat_lon="36.1424 N 86.8014 W"
                     /collection_date="2024-08"
                     /collected_by="VUMC Urology"
WGS         JBIRAH010000001-JBIRAH010000096
WGS_SCAFLD  NZ_JBIRAH010000001-NZ_JBIRAH010000096
//
LOCUS       NZ_JBRXAJ010000000   5079247 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain MEI2BO-21, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBRXAJ000000000
VERSION     NZ_JBRXAJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50713124
            Assembly: GCF_056157785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5079247)
  AUTHORS   Spahr,Y., Collaud,A. and Perreten,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2025) Institute of Veterinary Bacteriology,
            University of Bern, Laenggassstrasse 122, Bern 3012, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRXAJ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBRXAJ000000000.  This version of the project
            (01) has the accession number NZ_JBRXAJ010000000, and consists of
            sequences JBRXAJ010000001-JBRXAJ010000007.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Autocycler v. 0.5.2; Polypolish v. 0.6.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 322.42715331623x
            Sequencing Technology  :: Oxford Nanopore MinION; Illumina NovaSeq
                                      6000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157785.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:32:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,957
            CDSs (total)                      :: 4,840
            Genes (coding)                    :: 4,681
            CDSs (with protein)               :: 4,681
            Genes (RNA)                       :: 117
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 159
            CDSs (without protein)            :: 159
            Pseudo Genes (ambiguous residues) :: 0 of 159
            Pseudo Genes (frameshifted)       :: 71 of 159
            Pseudo Genes (incomplete)         :: 95 of 159
            Pseudo Genes (internal stop)      :: 28 of 159
            Pseudo Genes (multiple problems)  :: 32 of 159
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5079247
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="MEI2BO-21"
                     /isolation_source="Soil surface"
                     /db_xref="taxon:562"
                     /geo_loc_name="Switzerland: Bern"
                     /collection_date="2021-05"
                     /collected_by="Veterinary staff"
WGS         JBRXAJ010000001-JBRXAJ010000007
WGS_SCAFLD  NZ_CM149595
WGS_SCAFLD  NZ_JBRXAJ010000002-NZ_JBRXAJ010000007
//
LOCUS       NZ_JBRXAL010000000   5039341 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain MEI2B-1023, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBRXAL000000000
VERSION     NZ_JBRXAL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50713122
            Assembly: GCF_056157765.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5039341)
  AUTHORS   Spahr,Y., Collaud,A. and Perreten,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2025) Institute of Veterinary Bacteriology,
            University of Bern, Laenggassstrasse 122, Bern 3012, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRXAL000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBRXAL000000000.  This version of the project
            (01) has the accession number NZ_JBRXAL010000000, and consists of
            sequences JBRXAL010000001-JBRXAL010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Autocycler v. 0.5.2; Polypolish v. 0.6.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 198.303702865851x
            Sequencing Technology  :: Oxford Nanopore MinION; Illumina NovaSeq
                                      6000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157765.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:37:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,975
            CDSs (total)                      :: 4,852
            Genes (coding)                    :: 4,676
            CDSs (with protein)               :: 4,676
            Genes (RNA)                       :: 123
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 176
            CDSs (without protein)            :: 176
            Pseudo Genes (ambiguous residues) :: 0 of 176
            Pseudo Genes (frameshifted)       :: 62 of 176
            Pseudo Genes (incomplete)         :: 110 of 176
            Pseudo Genes (internal stop)      :: 35 of 176
            Pseudo Genes (multiple problems)  :: 28 of 176
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5039341
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="MEI2B-1023"
                     /isolation_source="Soil surface"
                     /db_xref="taxon:562"
                     /geo_loc_name="Switzerland: Bern"
                     /collection_date="2023-10"
                     /collected_by="Veterinary staff"
WGS         JBRXAL010000001-JBRXAL010000004
WGS_SCAFLD  NZ_CM149594
WGS_SCAFLD  NZ_JBRXAL010000002-NZ_JBRXAL010000004
//
LOCUS       NZ_JBIXCW010000000   5196891 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1118, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXCW000000000
VERSION     NZ_JBIXCW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247279
            Assembly: GCF_045620425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5196891)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXCW000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXCW000000000.  This version of the project
            (01) has the accession number NZ_JBIXCW010000000, and consists of
            sequences JBIXCW010000001-JBIXCW010000010.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 348x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045620425.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:43:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,179
            CDSs (total)                      :: 5,058
            Genes (coding)                    :: 4,737
            CDSs (with protein)               :: 4,737
            Genes (RNA)                       :: 121
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 90
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 321
            CDSs (without protein)            :: 321
            Pseudo Genes (ambiguous residues) :: 0 of 321
            Pseudo Genes (frameshifted)       :: 176 of 321
            Pseudo Genes (incomplete)         :: 152 of 321
            Pseudo Genes (internal stop)      :: 44 of 321
            Pseudo Genes (multiple problems)  :: 48 of 321
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5196891
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1118"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXCW010000001-JBIXCW010000010
WGS_SCAFLD  NZ_JBIXCW010000001-NZ_JBIXCW010000010
//
LOCUS       NZ_JBWDVD010000000   5252732 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli isolate 6120-1H1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWDVD000000000
VERSION     NZ_JBWDVD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56497025
            Assembly: GCF_056161705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5252732)
  AUTHORS   Nnajide,C.R., Sanderson,H., Li,S., Murugesan,S., Helmy,M.,
            Downing,T., Beiko,R.G., Rubin,J.E., Dillon,J.-A.R. and White,A.P.
  TITLE     Genomic Analysis of E. coli Strains Circulating during
            Colibacillosis Outbreaks on broiler Farms
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5252732)
  AUTHORS   Li,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-MAR-2026) Computer Science, University Of
            Saskatchewan, 448 Perreault Lane, Saskatoon S7K6B6, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWDVD000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBWDVD000000000.  This version of the project
            (01) has the accession number NZ_JBWDVD010000000, and consists of
            sequences JBWDVD010000001-JBWDVD010000002.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 31-OCT-2024
            Assembly Method        :: Flye v. 2.9.4-b1799
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 900x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161705.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:54:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,179
            CDSs (total)                      :: 5,063
            Genes (coding)                    :: 4,829
            CDSs (with protein)               :: 4,829
            Genes (RNA)                       :: 116
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 234
            CDSs (without protein)            :: 234
            Pseudo Genes (ambiguous residues) :: 0 of 234
            Pseudo Genes (frameshifted)       :: 99 of 234
            Pseudo Genes (incomplete)         :: 144 of 234
            Pseudo Genes (internal stop)      :: 48 of 234
            Pseudo Genes (multiple problems)  :: 51 of 234
            Pseudo Genes (short protein)      :: 1 of 234
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5252732
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /isolate="6120-1H1"
                     /isolation_source="heart, spleen, liver"
                     /host="broiler chicken"
                     /db_xref="taxon:562"
                     /geo_loc_name="Canada: Saskatchewan"
                     /collection_date="2019-07/2022-05"
WGS         JBWDVD010000001-JBWDVD010000002
WGS_SCAFLD  NZ_JBWDVD010000001-NZ_JBWDVD010000002
//
LOCUS       NZ_JBIXDM010000000   5078267 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1100, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXDM000000000
VERSION     NZ_JBIXDM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247263
            Assembly: GCF_045620765.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5078267)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXDM000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXDM000000000.  This version of the project
            (01) has the accession number NZ_JBIXDM010000000, and consists of
            sequences JBIXDM010000001-JBIXDM010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 380x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045620765.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:51:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,954
            CDSs (total)                      :: 4,830
            Genes (coding)                    :: 4,570
            CDSs (with protein)               :: 4,570
            Genes (RNA)                       :: 124
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 15
            Pseudo Genes (total)              :: 260
            CDSs (without protein)            :: 260
            Pseudo Genes (ambiguous residues) :: 0 of 260
            Pseudo Genes (frameshifted)       :: 106 of 260
            Pseudo Genes (incomplete)         :: 140 of 260
            Pseudo Genes (internal stop)      :: 46 of 260
            Pseudo Genes (multiple problems)  :: 29 of 260
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5078267
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1100"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXDM010000001-JBIXDM010000008
WGS_SCAFLD  NZ_JBIXDM010000001-NZ_JBIXDM010000008
//
LOCUS       NZ_JBWDVE010000000   5518845 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli isolate 6120-1L1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWDVE000000000
VERSION     NZ_JBWDVE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56497024
            Assembly: GCF_056161725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5518845)
  AUTHORS   Nnajide,C.R., Sanderson,H., Li,S., Murugesan,S., Helmy,M.,
            Downing,T., Beiko,R.G., Rubin,J.E., Dillon,J.-A.R. and White,A.P.
  TITLE     Genomic Analysis of E. coli Strains Circulating during
            Colibacillosis Outbreaks on broiler Farms
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5518845)
  AUTHORS   Li,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-MAR-2026) Computer Science, University Of
            Saskatchewan, 448 Perreault Lane, Saskatoon S7K6B6, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWDVE000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBWDVE000000000.  This version of the project
            (01) has the accession number NZ_JBWDVE010000000, and consists of
            sequences JBWDVE010000001-JBWDVE010000003.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 31-OCT-2024
            Assembly Method        :: Flye v. 2.9.4-b1799
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 900x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161725.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:00:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,477
            CDSs (total)                      :: 5,359
            Genes (coding)                    :: 5,066
            CDSs (with protein)               :: 5,066
            Genes (RNA)                       :: 118
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 293
            CDSs (without protein)            :: 293
            Pseudo Genes (ambiguous residues) :: 0 of 293
            Pseudo Genes (frameshifted)       :: 132 of 293
            Pseudo Genes (incomplete)         :: 201 of 293
            Pseudo Genes (internal stop)      :: 62 of 293
            Pseudo Genes (multiple problems)  :: 85 of 293
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5518845
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /isolate="6120-1L1"
                     /isolation_source="heart, spleen, liver"
                     /host="broiler chicken"
                     /db_xref="taxon:562"
                     /geo_loc_name="Canada: Saskatchewan"
                     /collection_date="2019-07/2022-05"
WGS         JBWDVE010000001-JBWDVE010000003
WGS_SCAFLD  NZ_JBWDVE010000001-NZ_JBWDVE010000003
//
LOCUS       NZ_JBWDUV010000000   5252718 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli isolate 6120-3H1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWDUV000000000
VERSION     NZ_JBWDUV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56497033
            Assembly: GCF_056161505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5252718)
  AUTHORS   Nnajide,C.R., Sanderson,H., Li,S., Murugesan,S., Helmy,M.,
            Downing,T., Beiko,R.G., Rubin,J.E., Dillon,J.-A.R. and White,A.P.
  TITLE     Genomic Analysis of E. coli Strains Circulating during
            Colibacillosis Outbreaks on broiler Farms
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5252718)
  AUTHORS   Li,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-MAR-2026) Computer Science, University Of
            Saskatchewan, 448 Perreault Lane, Saskatoon S7K6B6, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWDUV000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBWDUV000000000.  This version of the project
            (01) has the accession number NZ_JBWDUV010000000, and consists of
            sequences JBWDUV010000001-JBWDUV010000002.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 31-OCT-2024
            Assembly Method        :: Flye v. 2.9.4-b1799
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 900x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161505.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:03:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,178
            CDSs (total)                      :: 5,062
            Genes (coding)                    :: 4,826
            CDSs (with protein)               :: 4,826
            Genes (RNA)                       :: 116
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 236
            CDSs (without protein)            :: 236
            Pseudo Genes (ambiguous residues) :: 0 of 236
            Pseudo Genes (frameshifted)       :: 100 of 236
            Pseudo Genes (incomplete)         :: 145 of 236
            Pseudo Genes (internal stop)      :: 48 of 236
            Pseudo Genes (multiple problems)  :: 51 of 236
            Pseudo Genes (short protein)      :: 1 of 236
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5252718
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /isolate="6120-3H1"
                     /isolation_source="heart, spleen, liver"
                     /host="broiler chicken"
                     /db_xref="taxon:562"
                     /geo_loc_name="Canada: Saskatchewan"
                     /collection_date="2019-07/2022-05"
WGS         JBWDUV010000001-JBWDUV010000002
WGS_SCAFLD  NZ_JBWDUV010000001-NZ_JBWDUV010000002
//
LOCUS       NZ_JBRWZU010000000   4927376 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain MEI7BO1-21, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBRWZU000000000
VERSION     NZ_JBRWZU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50713139
            Assembly: GCF_056155265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4927376)
  AUTHORS   Spahr,Y., Collaud,A. and Perreten,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2025) Institute of Veterinary Bacteriology,
            University of Bern, Laenggassstrasse 122, Bern 3012, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWZU000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBRWZU000000000.  This version of the project
            (01) has the accession number NZ_JBRWZU010000000, and consists of
            sequences JBRWZU010000001-JBRWZU010000003.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Autocycler v. 0.5.2; Polypolish v. 0.6.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 156.804299083325x
            Sequencing Technology  :: Oxford Nanopore MinION; Illumina NovaSeq
                                      6000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155265.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:21:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,857
            CDSs (total)                      :: 4,738
            Genes (coding)                    :: 4,560
            CDSs (with protein)               :: 4,560
            Genes (RNA)                       :: 119
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 178
            CDSs (without protein)            :: 178
            Pseudo Genes (ambiguous residues) :: 0 of 178
            Pseudo Genes (frameshifted)       :: 63 of 178
            Pseudo Genes (incomplete)         :: 113 of 178
            Pseudo Genes (internal stop)      :: 37 of 178
            Pseudo Genes (multiple problems)  :: 33 of 178
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4927376
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="MEI7BO1-21"
                     /isolation_source="Soil surface"
                     /db_xref="taxon:562"
                     /geo_loc_name="Switzerland: Bern"
                     /collection_date="2021-05"
                     /collected_by="Veterinary staff"
WGS         JBRWZU010000001-JBRWZU010000003
WGS_SCAFLD  NZ_CM149560
WGS_SCAFLD  NZ_JBRWZU010000002-NZ_JBRWZU010000003
//
LOCUS       NZ_JBIXEF010000000   5050158 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1077, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXEF000000000
VERSION     NZ_JBIXEF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247244
            Assembly: GCF_045621065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5050158)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXEF000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXEF000000000.  This version of the project
            (01) has the accession number NZ_JBIXEF010000000, and consists of
            sequences JBIXEF010000001-JBIXEF010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 224x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045621065.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:52:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,916
            CDSs (total)                      :: 4,797
            Genes (coding)                    :: 4,586
            CDSs (with protein)               :: 4,586
            Genes (RNA)                       :: 119
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 211
            CDSs (without protein)            :: 211
            Pseudo Genes (ambiguous residues) :: 0 of 211
            Pseudo Genes (frameshifted)       :: 122 of 211
            Pseudo Genes (incomplete)         :: 97 of 211
            Pseudo Genes (internal stop)      :: 34 of 211
            Pseudo Genes (multiple problems)  :: 37 of 211
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5050158
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1077"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXEF010000001-JBIXEF010000006
WGS_SCAFLD  NZ_JBIXEF010000001-NZ_JBIXEF010000006
//
LOCUS       NZ_JBWDUW010000000   5436899 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli isolate 6120-3C8, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWDUW000000000
VERSION     NZ_JBWDUW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56497032
            Assembly: GCF_056161545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5436899)
  AUTHORS   Nnajide,C.R., Sanderson,H., Li,S., Murugesan,S., Helmy,M.,
            Downing,T., Beiko,R.G., Rubin,J.E., Dillon,J.-A.R. and White,A.P.
  TITLE     Genomic Analysis of E. coli Strains Circulating during
            Colibacillosis Outbreaks on broiler Farms
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5436899)
  AUTHORS   Li,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-MAR-2026) Computer Science, University Of
            Saskatchewan, 448 Perreault Lane, Saskatoon S7K6B6, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWDUW000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBWDUW000000000.  This version of the project
            (01) has the accession number NZ_JBWDUW010000000, and consists of
            sequences JBWDUW010000001-JBWDUW010000002.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 31-OCT-2024
            Assembly Method        :: Flye v. 2.9.4-b1799
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 900x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161545.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:04:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,391
            CDSs (total)                      :: 5,273
            Genes (coding)                    :: 4,991
            CDSs (with protein)               :: 4,991
            Genes (RNA)                       :: 118
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 282
            CDSs (without protein)            :: 282
            Pseudo Genes (ambiguous residues) :: 0 of 282
            Pseudo Genes (frameshifted)       :: 124 of 282
            Pseudo Genes (incomplete)         :: 197 of 282
            Pseudo Genes (internal stop)      :: 62 of 282
            Pseudo Genes (multiple problems)  :: 84 of 282
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5436899
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /isolate="6120-3C8"
                     /isolation_source="heart, spleen, liver"
                     /host="broiler chicken"
                     /db_xref="taxon:562"
                     /geo_loc_name="Canada: Saskatchewan"
                     /collection_date="2019-07/2022-05"
WGS         JBWDUW010000001-JBWDUW010000002
WGS_SCAFLD  NZ_JBWDUW010000001-NZ_JBWDUW010000002
//
LOCUS       NZ_JBWDVC010000000   5412809 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli isolate 6120-1C5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWDVC000000000
VERSION     NZ_JBWDVC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56497026
            Assembly: GCF_056161685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5412809)
  AUTHORS   Nnajide,C.R., Sanderson,H., Li,S., Murugesan,S., Helmy,M.,
            Downing,T., Beiko,R.G., Rubin,J.E., Dillon,J.-A.R. and White,A.P.
  TITLE     Genomic Analysis of E. coli Strains Circulating during
            Colibacillosis Outbreaks on broiler Farms
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5412809)
  AUTHORS   Li,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-MAR-2026) Computer Science, University Of
            Saskatchewan, 448 Perreault Lane, Saskatoon S7K6B6, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWDVC000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBWDVC000000000.  This version of the project
            (01) has the accession number NZ_JBWDVC010000000, and consists of
            sequences JBWDVC010000001-JBWDVC010000002.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 31-OCT-2024
            Assembly Method        :: Flye v. 2.9.4-b1799
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 900x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161685.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:04:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,365
            CDSs (total)                      :: 5,247
            Genes (coding)                    :: 4,969
            CDSs (with protein)               :: 4,969
            Genes (RNA)                       :: 118
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 278
            CDSs (without protein)            :: 278
            Pseudo Genes (ambiguous residues) :: 0 of 278
            Pseudo Genes (frameshifted)       :: 122 of 278
            Pseudo Genes (incomplete)         :: 194 of 278
            Pseudo Genes (internal stop)      :: 62 of 278
            Pseudo Genes (multiple problems)  :: 83 of 278
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5412809
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /isolate="6120-1C5"
                     /isolation_source="heart, spleen, liver"
                     /host="broiler chicken"
                     /db_xref="taxon:562"
                     /geo_loc_name="Canada: Saskatchewan"
                     /collection_date="2019-07/2022-05"
WGS         JBWDVC010000001-JBWDVC010000002
WGS_SCAFLD  NZ_JBWDVC010000001-NZ_JBWDVC010000002
//
LOCUS       NZ_JBWDUY010000000   5410176 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli isolate 6120-3S1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWDUY000000000
VERSION     NZ_JBWDUY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56497030
            Assembly: GCF_056161605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5410176)
  AUTHORS   Nnajide,C.R., Sanderson,H., Li,S., Murugesan,S., Helmy,M.,
            Downing,T., Beiko,R.G., Rubin,J.E., Dillon,J.-A.R. and White,A.P.
  TITLE     Genomic Analysis of E. coli Strains Circulating during
            Colibacillosis Outbreaks on broiler Farms
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5410176)
  AUTHORS   Li,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-MAR-2026) Computer Science, University Of
            Saskatchewan, 448 Perreault Lane, Saskatoon S7K6B6, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWDUY000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBWDUY000000000.  This version of the project
            (01) has the accession number NZ_JBWDUY010000000, and consists of
            sequences JBWDUY010000001-JBWDUY010000003.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 31-OCT-2024
            Assembly Method        :: Flye v. 2.9.4-b1799
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 900x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161605.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:11:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,366
            CDSs (total)                      :: 5,248
            Genes (coding)                    :: 4,970
            CDSs (with protein)               :: 4,970
            Genes (RNA)                       :: 118
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 278
            CDSs (without protein)            :: 278
            Pseudo Genes (ambiguous residues) :: 0 of 278
            Pseudo Genes (frameshifted)       :: 122 of 278
            Pseudo Genes (incomplete)         :: 194 of 278
            Pseudo Genes (internal stop)      :: 62 of 278
            Pseudo Genes (multiple problems)  :: 83 of 278
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5410176
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /isolate="6120-3S1"
                     /isolation_source="heart, spleen, liver"
                     /host="broiler chicken"
                     /db_xref="taxon:562"
                     /geo_loc_name="Canada: Saskatchewan"
                     /collection_date="2019-07/2022-05"
WGS         JBWDUY010000001-JBWDUY010000003
WGS_SCAFLD  NZ_JBWDUY010000001-NZ_JBWDUY010000003
//
LOCUS       NZ_JBWDVB010000000   5252732 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli isolate 6120-2S1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWDVB000000000
VERSION     NZ_JBWDVB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56497027
            Assembly: GCF_056161665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5252732)
  AUTHORS   Nnajide,C.R., Sanderson,H., Li,S., Murugesan,S., Helmy,M.,
            Downing,T., Beiko,R.G., Rubin,J.E., Dillon,J.-A.R. and White,A.P.
  TITLE     Genomic Analysis of E. coli Strains Circulating during
            Colibacillosis Outbreaks on broiler Farms
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5252732)
  AUTHORS   Li,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-MAR-2026) Computer Science, University Of
            Saskatchewan, 448 Perreault Lane, Saskatoon S7K6B6, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWDVB000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBWDVB000000000.  This version of the project
            (01) has the accession number NZ_JBWDVB010000000, and consists of
            sequences JBWDVB010000001-JBWDVB010000002.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 31-OCT-2024
            Assembly Method        :: Flye v. 2.9.4-b1799
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 900x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161665.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:12:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,178
            CDSs (total)                      :: 5,062
            Genes (coding)                    :: 4,827
            CDSs (with protein)               :: 4,827
            Genes (RNA)                       :: 116
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 235
            CDSs (without protein)            :: 235
            Pseudo Genes (ambiguous residues) :: 0 of 235
            Pseudo Genes (frameshifted)       :: 100 of 235
            Pseudo Genes (incomplete)         :: 144 of 235
            Pseudo Genes (internal stop)      :: 48 of 235
            Pseudo Genes (multiple problems)  :: 51 of 235
            Pseudo Genes (short protein)      :: 1 of 235
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5252732
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /isolate="6120-2S1"
                     /isolation_source="heart, spleen, liver"
                     /host="broiler chicken"
                     /db_xref="taxon:562"
                     /geo_loc_name="Canada: Saskatchewan"
                     /collection_date="2019-07/2022-05"
WGS         JBWDVB010000001-JBWDVB010000002
WGS_SCAFLD  NZ_JBWDVB010000001-NZ_JBWDVB010000002
//
LOCUS       NZ_JBWDUZ010000000   5391118 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli isolate 6120-2H3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWDUZ000000000
VERSION     NZ_JBWDUZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56497029
            Assembly: GCF_056161625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5391118)
  AUTHORS   Nnajide,C.R., Sanderson,H., Li,S., Murugesan,S., Helmy,M.,
            Downing,T., Beiko,R.G., Rubin,J.E., Dillon,J.-A.R. and White,A.P.
  TITLE     Genomic Analysis of E. coli Strains Circulating during
            Colibacillosis Outbreaks on broiler Farms
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5391118)
  AUTHORS   Li,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-MAR-2026) Computer Science, University Of
            Saskatchewan, 448 Perreault Lane, Saskatoon S7K6B6, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWDUZ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBWDUZ000000000.  This version of the project
            (01) has the accession number NZ_JBWDUZ010000000, and consists of
            sequences JBWDUZ010000001-JBWDUZ010000002.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 31-OCT-2024
            Assembly Method        :: Flye v. 2.9.4-b1799
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 900x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161625.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:12:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,349
            CDSs (total)                      :: 5,232
            Genes (coding)                    :: 4,956
            CDSs (with protein)               :: 4,956
            Genes (RNA)                       :: 117
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 276
            CDSs (without protein)            :: 276
            Pseudo Genes (ambiguous residues) :: 0 of 276
            Pseudo Genes (frameshifted)       :: 123 of 276
            Pseudo Genes (incomplete)         :: 193 of 276
            Pseudo Genes (internal stop)      :: 61 of 276
            Pseudo Genes (multiple problems)  :: 84 of 276
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5391118
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /isolate="6120-2H3"
                     /isolation_source="heart, spleen, liver"
                     /host="broiler chicken"
                     /db_xref="taxon:562"
                     /geo_loc_name="Canada: Saskatchewan"
                     /collection_date="2019-07/2022-05"
WGS         JBWDUZ010000001-JBWDUZ010000002
WGS_SCAFLD  NZ_JBWDUZ010000001-NZ_JBWDUZ010000002
//
LOCUS       NZ_JBIRAI010000000   5025502 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain BTF58T-2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIRAI000000000
VERSION     NZ_JBIRAI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44467140
            Assembly: GCF_056153925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5025502)
  AUTHORS   Reasoner,S.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JAN-2025) Department of Pathology, Microbiology and
            Immunology, Vanderbilt University Medical Center, 1211 21st Avenue
            South, Nashville, TN 37212, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIRAI000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIRAI000000000.  This version of the project
            (01) has the accession number NZ_JBIRAI010000000, and consists of
            sequences JBIRAI010000001-JBIRAI010000048.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 149x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056153925.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:03:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,930
            CDSs (total)                      :: 4,841
            Genes (coding)                    :: 4,666
            CDSs (with protein)               :: 4,666
            Genes (RNA)                       :: 89
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 80
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 175
            CDSs (without protein)            :: 175
            Pseudo Genes (ambiguous residues) :: 0 of 175
            Pseudo Genes (frameshifted)       :: 58 of 175
            Pseudo Genes (incomplete)         :: 131 of 175
            Pseudo Genes (internal stop)      :: 26 of 175
            Pseudo Genes (multiple problems)  :: 36 of 175
            Pseudo Genes (short protein)      :: 1 of 175
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5025502
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="BTF58T-2"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA: Nashville, TN"
                     /lat_lon="36.1424 N 86.8014 W"
                     /collection_date="2022-10"
                     /collected_by="VUMC Urology"
WGS         JBIRAI010000001-JBIRAI010000048
WGS_SCAFLD  NZ_JBIRAI010000001-NZ_JBIRAI010000048
//
LOCUS       NZ_JBWDVA010000000   5439969 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli isolate 6120-2C8, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWDVA000000000
VERSION     NZ_JBWDVA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56497028
            Assembly: GCF_056161645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5439969)
  AUTHORS   Nnajide,C.R., Sanderson,H., Li,S., Murugesan,S., Helmy,M.,
            Downing,T., Beiko,R.G., Rubin,J.E., Dillon,J.-A.R. and White,A.P.
  TITLE     Genomic Analysis of E. coli Strains Circulating during
            Colibacillosis Outbreaks on broiler Farms
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5439969)
  AUTHORS   Li,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-MAR-2026) Computer Science, University Of
            Saskatchewan, 448 Perreault Lane, Saskatoon S7K6B6, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWDVA000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBWDVA000000000.  This version of the project
            (01) has the accession number NZ_JBWDVA010000000, and consists of
            sequences JBWDVA010000001-JBWDVA010000003.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 31-OCT-2024
            Assembly Method        :: Flye v. 2.9.4-b1799
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 900x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161645.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:16:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,402
            CDSs (total)                      :: 5,284
            Genes (coding)                    :: 4,996
            CDSs (with protein)               :: 4,996
            Genes (RNA)                       :: 118
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 288
            CDSs (without protein)            :: 288
            Pseudo Genes (ambiguous residues) :: 0 of 288
            Pseudo Genes (frameshifted)       :: 128 of 288
            Pseudo Genes (incomplete)         :: 201 of 288
            Pseudo Genes (internal stop)      :: 63 of 288
            Pseudo Genes (multiple problems)  :: 86 of 288
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5439969
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /isolate="6120-2C8"
                     /isolation_source="heart, spleen, liver"
                     /host="broiler chicken"
                     /db_xref="taxon:562"
                     /geo_loc_name="Canada: Saskatchewan"
                     /collection_date="2019-07/2022-05"
WGS         JBWDVA010000001-JBWDVA010000003
WGS_SCAFLD  NZ_JBWDVA010000001-NZ_JBWDVA010000003
//
LOCUS       NZ_FZFO01000000      5648558 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli isolate F1_368E, whole genome shotgun sequencing
            project.
ACCESSION   NZ_FZFO00000000
VERSION     NZ_FZFO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA104140471
            Assembly: GCF_900195715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1
  AUTHORS   Djordjevic P,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JUN-2017) Ausgem, ithree, The ithree institute,
            University of Technology Sydney, P.O. Box 123, Broadway, NSW 2007,
            Australia, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FZFO00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_FZFO00000000.  This version of the project
            (01) has the accession number NZ_FZFO01000000, and consists of
            sequences FZFO01000001-FZFO01000580.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900195715.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:19:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,934
            CDSs (total)                      :: 5,821
            Genes (coding)                    :: 5,398
            CDSs (with protein)               :: 5,398
            Genes (RNA)                       :: 113
            rRNAs                             :: 6, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 4 (16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 423
            CDSs (without protein)            :: 423
            Pseudo Genes (ambiguous residues) :: 0 of 423
            Pseudo Genes (frameshifted)       :: 113 of 423
            Pseudo Genes (incomplete)         :: 317 of 423
            Pseudo Genes (internal stop)      :: 58 of 423
            Pseudo Genes (multiple problems)  :: 58 of 423
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5648558
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /isolate="F1_368E"
                     /isolation_source="Pig rectal swab"
                     /db_xref="taxon:562"
                     /collection_date="2007"
WGS         FZFO01000001-FZFO01000580
WGS_SCAFLD  NZ_FZFO01000001-NZ_FZFO01000580
//
LOCUS       NZ_JBWDUX010000000   5610222 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli isolate 6120-3L1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWDUX000000000
VERSION     NZ_JBWDUX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56497031
            Assembly: GCF_056161565.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5610222)
  AUTHORS   Nnajide,C.R., Sanderson,H., Li,S., Murugesan,S., Helmy,M.,
            Downing,T., Beiko,R.G., Rubin,J.E., Dillon,J.-A.R. and White,A.P.
  TITLE     Genomic Analysis of E. coli Strains Circulating during
            Colibacillosis Outbreaks on broiler Farms
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5610222)
  AUTHORS   Li,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-MAR-2026) Computer Science, University Of
            Saskatchewan, 448 Perreault Lane, Saskatoon S7K6B6, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWDUX000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBWDUX000000000.  This version of the project
            (01) has the accession number NZ_JBWDUX010000000, and consists of
            sequences JBWDUX010000001-JBWDUX010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 31-OCT-2024
            Assembly Method        :: Flye v. 2.9.4-b1799
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 900x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161565.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:19:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,497
            CDSs (total)                      :: 5,382
            Genes (coding)                    :: 5,129
            CDSs (with protein)               :: 5,129
            Genes (RNA)                       :: 115
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 253
            CDSs (without protein)            :: 253
            Pseudo Genes (ambiguous residues) :: 0 of 253
            Pseudo Genes (frameshifted)       :: 106 of 253
            Pseudo Genes (incomplete)         :: 152 of 253
            Pseudo Genes (internal stop)      :: 53 of 253
            Pseudo Genes (multiple problems)  :: 50 of 253
            Pseudo Genes (short protein)      :: 1 of 253
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5610222
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /isolate="6120-3L1"
                     /isolation_source="heart, spleen, liver"
                     /host="broiler chicken"
                     /db_xref="taxon:562"
                     /geo_loc_name="Canada: Saskatchewan"
                     /collection_date="2019-07/2022-05"
WGS         JBWDUX010000001-JBWDUX010000004
WGS_SCAFLD  NZ_JBWDUX010000001-NZ_JBWDUX010000004
//
LOCUS       NZ_JBRXAD010000000   5229888 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain MEI3O-23, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBRXAD000000000
VERSION     NZ_JBRXAD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50713130
            Assembly: GCF_056155445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5229888)
  AUTHORS   Spahr,Y., Collaud,A. and Perreten,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2025) Institute of Veterinary Bacteriology,
            University of Bern, Laenggassstrasse 122, Bern 3012, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRXAD000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBRXAD000000000.  This version of the project
            (01) has the accession number NZ_JBRXAD010000000, and consists of
            sequences JBRXAD010000001-JBRXAD010000003.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Autocycler v. 0.5.2; Polypolish v. 0.6.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 156.4376840766x
            Sequencing Technology  :: Oxford Nanopore MinION; Illumina NovaSeq
                                      6000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155445.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:26:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,133
            CDSs (total)                      :: 5,020
            Genes (coding)                    :: 4,793
            CDSs (with protein)               :: 4,793
            Genes (RNA)                       :: 113
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 227
            CDSs (without protein)            :: 227
            Pseudo Genes (ambiguous residues) :: 0 of 227
            Pseudo Genes (frameshifted)       :: 100 of 227
            Pseudo Genes (incomplete)         :: 168 of 227
            Pseudo Genes (internal stop)      :: 43 of 227
            Pseudo Genes (multiple problems)  :: 77 of 227
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5229888
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="MEI3O-23"
                     /isolation_source="Soil surface"
                     /db_xref="taxon:562"
                     /geo_loc_name="Switzerland: Bern"
                     /collection_date="2023-01"
                     /collected_by="Veterinary staff"
WGS         JBRXAD010000001-JBRXAD010000003
WGS_SCAFLD  NZ_CM149569
WGS_SCAFLD  NZ_JBRXAD010000002-NZ_JBRXAD010000003
//
LOCUS       NZ_NJKE01000000      5286636 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain MOD1-EC708, whole genome shotgun sequencing
            project.
ACCESSION   NZ_NJKE00000000
VERSION     NZ_NJKE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05591521
            Assembly: GCF_002465345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5286636)
  AUTHORS   Gangiredla,J., Mammel,M.K., Barnaba,T.J., Tartera,C., Gebru,S.T.,
            Patel,I.R., Leonard,S.R., Kotewicz,M.L., Lampel,K.A., Elkins,C.A.
            and Lacher,D.W.
  TITLE     Species-Wide Collection of Escherichia coli Isolates for
            Examination of Genomic Diversity
  JOURNAL   Genome Announc 5 (50), e01321-17 (2017)
   PUBMED   29242221
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5286636)
  AUTHORS   Gangiredla,J., Barnaba,T., Gebru,S., Mammel,M.K., Lacher,D.,
            Tartera,C., Patel,I.R., Leonard,S., Lampel,K.A. and Elkins,C.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUN-2017) CFSAN-ORS-DM-MMSB, US Food and Drug
            Administration, 5100 Paint Branch Parkway, College Park, MD 20740,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NJKE00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_NJKE00000000.  This version of the project
            (01) has the accession number NZ_NJKE01000000, and consists of
            sequences NJKE01000001-NJKE01000276.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 34.8x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002465345.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:18:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,402
            CDSs (total)                      :: 5,307
            Genes (coding)                    :: 5,022
            CDSs (with protein)               :: 5,022
            Genes (RNA)                       :: 95
            rRNAs                             :: 7, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2 (5S, 16S)
            tRNAs                             :: 71
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 285
            CDSs (without protein)            :: 285
            Pseudo Genes (ambiguous residues) :: 0 of 285
            Pseudo Genes (frameshifted)       :: 83 of 285
            Pseudo Genes (incomplete)         :: 196 of 285
            Pseudo Genes (internal stop)      :: 51 of 285
            Pseudo Genes (multiple problems)  :: 41 of 285
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5286636
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="MOD1-EC708"
                     /serotype="O8:K27:H-"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA"
                     /collection_date="1985"
                     /collected_by="University of Minnesota"
WGS         NJKE01000001-NJKE01000276
WGS_SCAFLD  NZ_NJKE01000001-NZ_NJKE01000276
//
LOCUS       NZ_JBUECA010000000   5397934 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain UPEC957C, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBUECA000000000
VERSION     NZ_JBUECA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN55000110
            Assembly: GCF_056163565.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5397934)
  AUTHORS   Dezoysa,A.R., Kwan,M., Edison,L.K., Barber,R., Glick,L.,
            Denagamage,T. and Kariyawasam,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2026) Department of Comparative, Diagnostic and
            Population Medicine, University of Florida, 1600 SW Archer Road,
            Gainesville, FL 32610, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBUECA000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBUECA000000000.  This version of the project
            (01) has the accession number NZ_JBUECA010000000, and consists of
            sequences JBUECA010000001-JBUECA010000005.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 25.0.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1.0x
            Sequencing Technology  :: Illumina MiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056163565.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 05:00:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,299
            CDSs (total)                      :: 5,174
            Genes (coding)                    :: 4,900
            CDSs (with protein)               :: 4,900
            Genes (RNA)                       :: 125
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 97
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 274
            CDSs (without protein)            :: 274
            Pseudo Genes (ambiguous residues) :: 0 of 274
            Pseudo Genes (frameshifted)       :: 122 of 274
            Pseudo Genes (incomplete)         :: 178 of 274
            Pseudo Genes (internal stop)      :: 51 of 274
            Pseudo Genes (multiple problems)  :: 67 of 274
            Pseudo Genes (short protein)      :: 1 of 274
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5397934
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="UPEC957C"
                     /host="canine"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA: Florida"
                     /collected_by="Clinical Microbiology, Parasitology, and
                     Serology Laboratory at the College of Veterinary Medicine
                     (CVM), University of Florida (UF)"
WGS         JBUECA010000001-JBUECA010000005
WGS_SCAFLD  NZ_CM149646
WGS_SCAFLD  NZ_JBUECA010000001-NZ_JBUECA010000004
//
LOCUS       NZ_JBRXAB010000000   5060880 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain MEI4B-1023, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBRXAB000000000
VERSION     NZ_JBRXAB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50713132
            Assembly: GCF_056155405.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5060880)
  AUTHORS   Spahr,Y., Collaud,A. and Perreten,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2025) Institute of Veterinary Bacteriology,
            University of Bern, Laenggassstrasse 122, Bern 3012, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRXAB000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBRXAB000000000.  This version of the project
            (01) has the accession number NZ_JBRXAB010000000, and consists of
            sequences JBRXAB010000001-JBRXAB010000006.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Autocycler v. 0.5.2; Polypolish v. 0.6.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 270.448089818372x
            Sequencing Technology  :: Oxford Nanopore MinION; Illumina NovaSeq
                                      6000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155405.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:38:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,955
            CDSs (total)                      :: 4,840
            Genes (coding)                    :: 4,698
            CDSs (with protein)               :: 4,698
            Genes (RNA)                       :: 115
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 142
            CDSs (without protein)            :: 142
            Pseudo Genes (ambiguous residues) :: 0 of 142
            Pseudo Genes (frameshifted)       :: 60 of 142
            Pseudo Genes (incomplete)         :: 84 of 142
            Pseudo Genes (internal stop)      :: 24 of 142
            Pseudo Genes (multiple problems)  :: 25 of 142
            Pseudo Genes (short protein)      :: 1 of 142
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5060880
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="MEI4B-1023"
                     /isolation_source="Soil surface"
                     /db_xref="taxon:562"
                     /geo_loc_name="Switzerland: Bern"
                     /collection_date="2023-10"
                     /collected_by="Veterinary staff"
WGS         JBRXAB010000001-JBRXAB010000006
WGS_SCAFLD  NZ_CM149567
WGS_SCAFLD  NZ_JBRXAB010000002-NZ_JBRXAB010000006
//
LOCUS       NZ_NWRL01000000      5519073 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain OLC0460, whole genome shotgun sequencing
            project.
ACCESSION   NZ_NWRL00000000
VERSION     NZ_NWRL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04900914
            Assembly: GCF_002531115.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5519073)
  AUTHORS   Knowles,M., Stinson,S., Lambert,D., Carrillo,C., Koziol,A.,
            Gauthier,M. and Blais,B.
  TITLE     Genomic Tools for Customized Recovery and Detection of Foodborne
            Shiga Toxigenic Escherichia coli
  JOURNAL   J Food Prot 79 (12), 2066-2077 (2016)
   PUBMED   28221970
REFERENCE   2  (bases 1 to 5519073)
  AUTHORS   Carrillo,C.D., Knowles,M., Stinson,S., Lambert,D., Koziol,A.G.,
            Gauthier,M. and Blais,B.W.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-SEP-2017) Research and Development, Science Branch,
            Canadian Food Inspection Agency, 960 Carling Ave, Building 22,
            Ottawa, ON K1A 0C6, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NWRL00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_NWRL00000000.  This version of the project
            (01) has the accession number NZ_NWRL01000000, and consists of
            sequences NWRL01000001-NWRL01000183.
            Source DNA available from Burton Blais, 960 Carling Ave., Bldg. 22,
            Ottawa, Ontario, Canada, K1A 0C6.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SPAdes v. 3.7.1
            Genome Coverage       :: 70.5617x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002531115.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:19:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,806
            CDSs (total)                      :: 5,684
            Genes (coding)                    :: 5,314
            CDSs (with protein)               :: 5,314
            Genes (RNA)                       :: 122
            rRNAs                             :: 7, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 99
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 370
            CDSs (without protein)            :: 370
            Pseudo Genes (ambiguous residues) :: 0 of 370
            Pseudo Genes (frameshifted)       :: 132 of 370
            Pseudo Genes (incomplete)         :: 236 of 370
            Pseudo Genes (internal stop)      :: 65 of 370
            Pseudo Genes (multiple problems)  :: 55 of 370
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5519073
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="OLC0460"
                     /serotype="O111:H8"
                     /db_xref="taxon:562"
                     /geo_loc_name="Canada"
                     /collection_date="1995-03-23"
WGS         NWRL01000001-NWRL01000183
WGS_SCAFLD  NZ_NWRL01000001-NZ_NWRL01000183
//
LOCUS       NZ_JWZH01000000      5134456 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CVM N34228PS, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JWZH00000000
VERSION     NZ_JWZH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03177643
            Assembly: GCF_000819065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5134456)
  AUTHORS   Tyson,G.H., McDermott,P.F., Li,C., Chen,Y., Tadesse,D.A.,
            Mukherjee,S., Bodeis-Jones,S., Kabera,C., Gaines,S.A.,
            Loneragan,G.H., Edrington,T.S., Torrence,M., Harhay,D.M. and
            Zhao,S.
  TITLE     WGS accurately predicts antimicrobial resistance in Escherichia
            coli
  JOURNAL   J Antimicrob Chemother 70 (10), 2763-2769 (2015)
   PUBMED   26142410
REFERENCE   2  (bases 1 to 5134456)
  AUTHORS   Tyson,G.H., McDermott,P.F., Li,C., Tadesse,D.A., Mukherjee,S.,
            Bodeis-Jones,S., Kabera,C., Gaines,S.A., Loneragan,G.H.,
            Edrington,T.S., Torrence,M., Harhay,D.M. and Zhao,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-NOV-2014) CVM, FDA, 8401 Muirkirk Rd, Laurel, MD
            20708, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JWZH00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JWZH00000000.  This version of the project
            (01) has the accession number NZ_JWZH01000000, and consists of
            sequences JWZH01000001-JWZH01000226.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: CLC Genomics Workbench v. 7.5
            Assembly Name         :: Escherichia coli CVM N34228PS v1.0
            Genome Coverage       :: 59.1x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000819065.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:40:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,160
            CDSs (total)                      :: 5,069
            Genes (coding)                    :: 4,803
            CDSs (with protein)               :: 4,803
            Genes (RNA)                       :: 91
            rRNAs                             :: 4, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 75
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 266
            CDSs (without protein)            :: 266
            Pseudo Genes (ambiguous residues) :: 0 of 266
            Pseudo Genes (frameshifted)       :: 91 of 266
            Pseudo Genes (incomplete)         :: 183 of 266
            Pseudo Genes (internal stop)      :: 43 of 266
            Pseudo Genes (multiple problems)  :: 44 of 266
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5134456
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CVM N34228PS"
                     /isolation_source="Farm"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA"
                     /collection_date="2011-12-16"
WGS         JWZH01000001-JWZH01000226
WGS_SCAFLD  NZ_JWZH01000001-NZ_JWZH01000226
//
LOCUS       NZ_JBRWZP010000000   5039340 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain MEI1-1023, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBRWZP000000000
VERSION     NZ_JBRWZP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50713144
            Assembly: GCF_056155185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5039340)
  AUTHORS   Spahr,Y., Collaud,A. and Perreten,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2025) Institute of Veterinary Bacteriology,
            University of Bern, Laenggassstrasse 122, Bern 3012, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWZP000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBRWZP000000000.  This version of the project
            (01) has the accession number NZ_JBRWZP010000000, and consists of
            sequences JBRWZP010000001-JBRWZP010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Autocycler v. 0.5.2; Polypolish v. 0.6.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 266.871835915021x
            Sequencing Technology  :: Oxford Nanopore MinION; Illumina NovaSeq
                                      6000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155185.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:37:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,975
            CDSs (total)                      :: 4,852
            Genes (coding)                    :: 4,676
            CDSs (with protein)               :: 4,676
            Genes (RNA)                       :: 123
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 176
            CDSs (without protein)            :: 176
            Pseudo Genes (ambiguous residues) :: 0 of 176
            Pseudo Genes (frameshifted)       :: 62 of 176
            Pseudo Genes (incomplete)         :: 110 of 176
            Pseudo Genes (internal stop)      :: 35 of 176
            Pseudo Genes (multiple problems)  :: 28 of 176
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5039340
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="MEI1-1023"
                     /isolation_source="Soil surface"
                     /db_xref="taxon:562"
                     /geo_loc_name="Switzerland: Bern"
                     /collection_date="2023-10"
                     /collected_by="Veterinary staff"
WGS         JBRWZP010000001-JBRWZP010000004
WGS_SCAFLD  NZ_CM149556
WGS_SCAFLD  NZ_JBRWZP010000002-NZ_JBRWZP010000004
//
LOCUS       NZ_JWZL01000000      5276762 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CVM N33825PS, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JWZL00000000
VERSION     NZ_JWZL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03177634
            Assembly: GCF_000819005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5276762)
  AUTHORS   Tyson,G.H., McDermott,P.F., Li,C., Chen,Y., Tadesse,D.A.,
            Mukherjee,S., Bodeis-Jones,S., Kabera,C., Gaines,S.A.,
            Loneragan,G.H., Edrington,T.S., Torrence,M., Harhay,D.M. and
            Zhao,S.
  TITLE     WGS accurately predicts antimicrobial resistance in Escherichia
            coli
  JOURNAL   J Antimicrob Chemother 70 (10), 2763-2769 (2015)
   PUBMED   26142410
REFERENCE   2  (bases 1 to 5276762)
  AUTHORS   Tyson,G.H., McDermott,P.F., Li,C., Tadesse,D.A., Mukherjee,S.,
            Bodeis-Jones,S., Kabera,C., Gaines,S.A., Loneragan,G.H.,
            Edrington,T.S., Torrence,M., Harhay,D.M. and Zhao,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-NOV-2014) CVM, FDA, 8401 Muirkirk Rd, Laurel, MD
            20708, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JWZL00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JWZL00000000.  This version of the project
            (01) has the accession number NZ_JWZL01000000, and consists of
            sequences JWZL01000001-JWZL01000113.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: CLC Genomics Workbench v. 7.5
            Assembly Name         :: Escherichia coli CVM N33825PS v1.0
            Genome Coverage       :: 70.5x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000819005.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:47:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,238
            CDSs (total)                      :: 5,135
            Genes (coding)                    :: 4,966
            CDSs (with protein)               :: 4,966
            Genes (RNA)                       :: 103
            rRNAs                             :: 7, 1, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1 (5S, 16S)
            partial rRNAs                     :: 6 (23S)
            tRNAs                             :: 80
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 169
            CDSs (without protein)            :: 169
            Pseudo Genes (ambiguous residues) :: 0 of 169
            Pseudo Genes (frameshifted)       :: 68 of 169
            Pseudo Genes (incomplete)         :: 118 of 169
            Pseudo Genes (internal stop)      :: 30 of 169
            Pseudo Genes (multiple problems)  :: 38 of 169
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5276762
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CVM N33825PS"
                     /isolation_source="Farm"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA"
                     /collection_date="2011-12-16"
WGS         JWZL01000001-JWZL01000113
WGS_SCAFLD  NZ_JWZL01000001-NZ_JWZL01000113
//
LOCUS       NZ_JBRKTZ010000000   4958969 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain ST351, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBRKTZ000000000
VERSION     NZ_JBRKTZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52211350
            Assembly: GCF_056155985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4958969)
  AUTHORS   Zanon,I.P. and Silva,R.O.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-OCT-2025) Department of Preventive Veterinary
            Medicine, Federal University of Minas Gerais, Avenida Antonio
            Carlos, Belo Horizonte, Minas Gerais 31270901, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRKTZ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBRKTZ000000000.  This version of the project
            (01) has the accession number NZ_JBRKTZ010000000, and consists of
            sequences JBRKTZ010000001-JBRKTZ010000093.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 112.43x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155985.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:15:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,926
            CDSs (total)                      :: 4,843
            Genes (coding)                    :: 4,647
            CDSs (with protein)               :: 4,647
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 72
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 196
            CDSs (without protein)            :: 196
            Pseudo Genes (ambiguous residues) :: 0 of 196
            Pseudo Genes (frameshifted)       :: 74 of 196
            Pseudo Genes (incomplete)         :: 123 of 196
            Pseudo Genes (internal stop)      :: 35 of 196
            Pseudo Genes (multiple problems)  :: 33 of 196
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4958969
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="ST351"
                     /isolation_source="Carcasses"
                     /host="Gallus gallus domesticus"
                     /db_xref="taxon:562"
                     /geo_loc_name="Brazil: Minas Gerais"
                     /collection_date="2024"
                     /collected_by="LAEV - UFMG"
WGS         JBRKTZ010000001-JBRKTZ010000093
WGS_SCAFLD  NZ_JBRKTZ010000001-NZ_JBRKTZ010000093
//
LOCUS       NZ_JWZF01000000      5640627 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CVM N34577PS, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JWZF00000000
VERSION     NZ_JWZF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03177651
            Assembly: GCF_000819145.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5640627)
  AUTHORS   Tyson,G.H., McDermott,P.F., Li,C., Chen,Y., Tadesse,D.A.,
            Mukherjee,S., Bodeis-Jones,S., Kabera,C., Gaines,S.A.,
            Loneragan,G.H., Edrington,T.S., Torrence,M., Harhay,D.M. and
            Zhao,S.
  TITLE     WGS accurately predicts antimicrobial resistance in Escherichia
            coli
  JOURNAL   J Antimicrob Chemother 70 (10), 2763-2769 (2015)
   PUBMED   26142410
REFERENCE   2  (bases 1 to 5640627)
  AUTHORS   Tyson,G.H., McDermott,P.F., Li,C., Tadesse,D.A., Mukherjee,S.,
            Bodeis-Jones,S., Kabera,C., Gaines,S.A., Loneragan,G.H.,
            Edrington,T.S., Torrence,M., Harhay,D.M. and Zhao,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-NOV-2014) CVM, FDA, 8401 Muirkirk Rd, Laurel, MD
            20708, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JWZF00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JWZF00000000.  This version of the project
            (01) has the accession number NZ_JWZF01000000, and consists of
            sequences JWZF01000001-JWZF01000321.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: CLC Genomics Workbench v. 7.5
            Assembly Name         :: Escherichia coli CVM N34577PS v1.0
            Genome Coverage       :: 81.6x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000819145.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:51:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,880
            CDSs (total)                      :: 5,773
            Genes (coding)                    :: 5,416
            CDSs (with protein)               :: 5,416
            Genes (RNA)                       :: 107
            rRNAs                             :: 5, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 5 (5S)
            partial rRNAs                     :: 3, 3 (16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 357
            CDSs (without protein)            :: 357
            Pseudo Genes (ambiguous residues) :: 0 of 357
            Pseudo Genes (frameshifted)       :: 117 of 357
            Pseudo Genes (incomplete)         :: 244 of 357
            Pseudo Genes (internal stop)      :: 57 of 357
            Pseudo Genes (multiple problems)  :: 58 of 357
            Pseudo Genes (short protein)      :: 1 of 357
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5640627
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CVM N34577PS"
                     /isolation_source="Farm"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA"
                     /collection_date="2012-01-13"
WGS         JWZF01000001-JWZF01000321
WGS_SCAFLD  NZ_JWZF01000001-NZ_JWZF01000321
//
LOCUS       NZ_NXNX01000000      5244075 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 25b_Esco_HA-NL, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NXNX00000000
VERSION     NZ_NXNX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05977348
            Assembly: GCF_002631405.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5244075)
  AUTHORS   Zhou,X., Garcia-Cobos,S., Ruijs,G.J.H.M., Kampinga,G.A.,
            Arends,J.P., Borst,D.M., Moller,L.V., Holman,N.D., Schuurs,T.A.,
            Bruijnesteijn van Coppenraet,L.E., Weel,J.F., van Zeijl,J.H.,
            Kock,R., Rossen,J.W.A. and Friedrich,A.W.
  TITLE     Epidemiology of Extended-Spectrum beta-Lactamase-Producing E. coli
            and Vancomycin-Resistant Enterococci in the Northern Dutch-German
            Cross-Border Region
  JOURNAL   Front Microbiol 8, 1914 (2017)
   PUBMED   29051750
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5244075)
  AUTHORS   Garcia-Cobos,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-SEP-2017) Medical Microbiology, University Medical
            Center Groningen, Hanzeplein 1, Groningen 9713 GZ, Netherlands
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NXNX00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_NXNX00000000.  This version of the project
            (01) has the accession number NZ_NXNX01000000, and consists of
            sequences NXNX01000001-NXNX01000458.
            Bacteria and source DNA available from MMB-UMCG Silvia Garcia
            Cobos.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 9.0.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 20.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002631405.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:12:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,421
            CDSs (total)                      :: 5,348
            Genes (coding)                    :: 4,973
            CDSs (with protein)               :: 4,973
            Genes (RNA)                       :: 73
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 375
            CDSs (without protein)            :: 375
            Pseudo Genes (ambiguous residues) :: 0 of 375
            Pseudo Genes (frameshifted)       :: 105 of 375
            Pseudo Genes (incomplete)         :: 284 of 375
            Pseudo Genes (internal stop)      :: 43 of 375
            Pseudo Genes (multiple problems)  :: 51 of 375
            Pseudo Genes (short protein)      :: 1 of 375
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5244075
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="25b_Esco_HA-NL"
                     /isolation_source="rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Netherlands"
                     /collection_date="2012"
WGS         NXNX01000001-NXNX01000458
WGS_SCAFLD  NZ_NXNX01000001-NZ_NXNX01000458
//
LOCUS       NZ_JBIRAN010000000   5121294 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain BTF8T-1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIRAN000000000
VERSION     NZ_JBIRAN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44467145
            Assembly: GCF_056153795.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5121294)
  AUTHORS   Reasoner,S.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JAN-2025) Department of Pathology, Microbiology and
            Immunology, Vanderbilt University Medical Center, 1211 21st Avenue
            South, Nashville, TN 37212, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIRAN000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIRAN000000000.  This version of the project
            (01) has the accession number NZ_JBIRAN010000000, and consists of
            sequences JBIRAN010000001-JBIRAN010000077.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 144x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056153795.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:07:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,099
            CDSs (total)                      :: 5,007
            Genes (coding)                    :: 4,778
            CDSs (with protein)               :: 4,778
            Genes (RNA)                       :: 92
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 82
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 229
            CDSs (without protein)            :: 229
            Pseudo Genes (ambiguous residues) :: 0 of 229
            Pseudo Genes (frameshifted)       :: 90 of 229
            Pseudo Genes (incomplete)         :: 149 of 229
            Pseudo Genes (internal stop)      :: 40 of 229
            Pseudo Genes (multiple problems)  :: 44 of 229
            Pseudo Genes (short protein)      :: 1 of 229
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5121294
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="BTF8T-1"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA: Nashville, TN"
                     /lat_lon="36.1424 N 86.8014 W"
                     /collection_date="2020-02"
                     /collected_by="VUMC Urology"
WGS         JBIRAN010000001-JBIRAN010000077
WGS_SCAFLD  NZ_JBIRAN010000001-NZ_JBIRAN010000077
//
LOCUS       NZ_JBHMHP010000000   5176155 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CEC5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBHMHP000000000
VERSION     NZ_JBHMHP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43012395
            Assembly: GCF_044129305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5176155)
  AUTHORS   Masalane,N.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Medical Microbiology, University of
            Kwazulu-Natal, Private Bag X 54001, Durban, Kwazulu-Natal 4000,
            South Africa
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBHMHP000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBHMHP000000000.  This version of the project
            (01) has the accession number NZ_JBHMHP010000000, and consists of
            sequences JBHMHP010000001-JBHMHP010000068.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 22-Jul
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 99x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_044129305.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:09:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,163
            CDSs (total)                      :: 5,080
            Genes (coding)                    :: 4,870
            CDSs (with protein)               :: 4,870
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 210
            CDSs (without protein)            :: 210
            Pseudo Genes (ambiguous residues) :: 0 of 210
            Pseudo Genes (frameshifted)       :: 80 of 210
            Pseudo Genes (incomplete)         :: 155 of 210
            Pseudo Genes (internal stop)      :: 35 of 210
            Pseudo Genes (multiple problems)  :: 51 of 210
            Pseudo Genes (short protein)      :: 1 of 210
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5176155
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CEC5"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="South Africa: Kwazulu-Natal"
                     /collection_date="2023-11"
                     /collected_by="NHLS"
WGS         JBHMHP010000001-JBHMHP010000068
WGS_SCAFLD  NZ_JBHMHP010000001-NZ_JBHMHP010000068
//
LOCUS       NZ_JARCEO010000000   5159251 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain B-J_43, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JARCEO000000000
VERSION     NZ_JARCEO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN33397558
            Assembly: GCF_029848325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5159251)
  AUTHORS   Nohejl,T., Palkovicova,J., Nesporova,K., Lausova,J., Valcek,A. and
            Dolejska,M.
  TITLE     Broad-host dissemination of plasmids co-harbouring the fos operon
            for fructooligosaccharide metabolism with antibiotic resistance
            genes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5159251)
  AUTHORS   Nohejl,T., Palkovicova,J., Nesporova,K., Lausova,J., Valcek,A. and
            Dolejska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2023) Department of Biology and Wildlife
            Diseases, University of Veterinary Sciences, Palackeho tr. 1946/1,
            Brno 612 42, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARCEO000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JARCEO000000000.  This version of the project
            (01) has the accession number NZ_JARCEO010000000, and consists of
            sequences JARCEO010000001-JARCEO010000143.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 105.640x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029848325.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:59:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,237
            CDSs (total)                      :: 5,124
            Genes (coding)                    :: 4,841
            CDSs (with protein)               :: 4,841
            Genes (RNA)                       :: 113
            rRNAs                             :: 6, 7, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 4, 7, 3 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 283
            CDSs (without protein)            :: 283
            Pseudo Genes (ambiguous residues) :: 0 of 283
            Pseudo Genes (frameshifted)       :: 92 of 283
            Pseudo Genes (incomplete)         :: 197 of 283
            Pseudo Genes (internal stop)      :: 45 of 283
            Pseudo Genes (multiple problems)  :: 43 of 283
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5159251
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="B-J_43"
                     /host="broiler chicken"
                     /db_xref="taxon:562"
                     /geo_loc_name="Czech Republic: Praha"
                     /collection_date="2008"
WGS         JARCEO010000001-JARCEO010000143
WGS_SCAFLD  NZ_JARCEO010000001-NZ_JARCEO010000143
//
LOCUS       NZ_WNKK01000000      4761878 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain PNUSAS115217, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WNKK00000000
VERSION     NZ_WNKK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13244682
            Assembly: GCF_016878795.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4761878)
  AUTHORS   Tran,T.
  TITLE     Plasmids from dairy manure
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4761878)
  AUTHORS   Tran,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-NOV-2019) Biology, Western University, 1151 Richmond
            St, London, ON N6A 3K7, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WNKK00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_WNKK00000000.  This version of the project
            (01) has the accession number NZ_WNKK01000000, and consists of
            sequences WNKK01000001-WNKK01000007.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: GS De Novo Assembler v. 191108
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Hybrid
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_016878795.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:36:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,681
            CDSs (total)                      :: 4,562
            Genes (coding)                    :: 4,353
            CDSs (with protein)               :: 4,353
            Genes (RNA)                       :: 119
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 209
            CDSs (without protein)            :: 209
            Pseudo Genes (ambiguous residues) :: 0 of 209
            Pseudo Genes (frameshifted)       :: 53 of 209
            Pseudo Genes (incomplete)         :: 151 of 209
            Pseudo Genes (internal stop)      :: 39 of 209
            Pseudo Genes (multiple problems)  :: 31 of 209
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4761878
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="PNUSAS115217"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA"
                     /collection_date="2019-09"
                     /collected_by="CDC"
WGS         WNKK01000001-WNKK01000007
WGS_SCAFLD  NZ_WNKK01000001-NZ_WNKK01000007
//
LOCUS       NZ_JAUAMW010000000   5512990 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain ETEC4060F, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAUAMW000000000
VERSION     NZ_JAUAMW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32549637
            Assembly: GCF_030346285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5512990)
  AUTHORS   Vereecke,N., Van Hoorde,S., Sperling,D., Theuns,S., Devriendt,B.
            and Cox,E.
  TITLE     Virotyping and genetic antimicrobial susceptibility testing of
            porcine ETEC/STEC strains and associated plasmid types
  JOURNAL   Front Microbiol 14, 1139312 (2023)
   PUBMED   37143544
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5512990)
  AUTHORS   Vereecke,N., Van Hoorde,S., Sperling,D., Theuns,S., Devriendt,B.
            and Cox,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAY-2023) Department of Pathobiology, Pharmacology
            and Zoological Medicine, Universiteit Gent, Salisburylaan 133,
            Merelbeke 9820, Belgium
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAUAMW000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JAUAMW000000000.  This version of the project
            (01) has the accession number NZ_JAUAMW010000000, and consists of
            sequences JAUAMW010000001-JAUAMW010000052.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9; minimap2 v. 2.20; medaka v.
                                      1.5.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 173x
            Sequencing Technology  :: Oxford Nanopore GridION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_030346285.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:26:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,450
            CDSs (total)                      :: 5,326
            Genes (coding)                    :: 4,868
            CDSs (with protein)               :: 4,868
            Genes (RNA)                       :: 124
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 91
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 458
            CDSs (without protein)            :: 458
            Pseudo Genes (ambiguous residues) :: 0 of 458
            Pseudo Genes (frameshifted)       :: 262 of 458
            Pseudo Genes (incomplete)         :: 221 of 458
            Pseudo Genes (internal stop)      :: 53 of 458
            Pseudo Genes (multiple problems)  :: 72 of 458
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5512990
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="ETEC4060F"
                     /isolation_source="feces"
                     /host="Sus scrofa"
                     /db_xref="taxon:562"
                     /geo_loc_name="Belgium"
                     /collection_date="2021"
                     /collected_by="IMM_DI04"
WGS         JAUAMW010000001-JAUAMW010000052
WGS_SCAFLD  NZ_JAUAMW010000001-NZ_JAUAMW010000052
//
LOCUS       NZ_JBJKEI010000000   5164012 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 24, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKEI000000000
VERSION     NZ_JBJKEI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44631461
            Assembly: GCF_045505185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5164012)
  AUTHORS   Dixon,B.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-NOV-2024) Division of Immunology, Immunity to
            Infection and Respiratory Medicine, University of Manchester,
            Princess Street, Manchester m17DN, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKEI000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJKEI000000000.  This version of the project
            (01) has the accession number NZ_JBJKEI010000000, and consists of
            sequences JBJKEI010000001-JBJKEI010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 670x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045505185.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:34:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,022
            CDSs (total)                      :: 4,907
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 115
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 237
            CDSs (without protein)            :: 237
            Pseudo Genes (ambiguous residues) :: 0 of 237
            Pseudo Genes (frameshifted)       :: 102 of 237
            Pseudo Genes (incomplete)         :: 154 of 237
            Pseudo Genes (internal stop)      :: 45 of 237
            Pseudo Genes (multiple problems)  :: 56 of 237
            Pseudo Genes (short protein)      :: 1 of 237
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5164012
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="24"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /collection_date="2003-02"
                     /genotype="ST73"
WGS         JBJKEI010000001-JBJKEI010000004
WGS_SCAFLD  NZ_JBJKEI010000001-NZ_JBJKEI010000004
//
LOCUS       NZ_JBRKUC010000000   5664924 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain ST38, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBRKUC000000000
VERSION     NZ_JBRKUC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52211347
            Assembly: GCF_056156045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5664924)
  AUTHORS   Zanon,I.P. and Silva,R.O.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-OCT-2025) Department of Preventive Veterinary
            Medicine, Federal University of Minas Gerais, Avenida Antonio
            Carlos, Belo Horizonte, Minas Gerais 31270901, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRKUC000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBRKUC000000000.  This version of the project
            (01) has the accession number NZ_JBRKUC010000000, and consists of
            sequences JBRKUC010000001-JBRKUC010000231.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 91.68x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056156045.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:38:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,728
            CDSs (total)                      :: 5,626
            Genes (coding)                    :: 5,338
            CDSs (with protein)               :: 5,338
            Genes (RNA)                       :: 102
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 85
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 288
            CDSs (without protein)            :: 288
            Pseudo Genes (ambiguous residues) :: 0 of 288
            Pseudo Genes (frameshifted)       :: 105 of 288
            Pseudo Genes (incomplete)         :: 204 of 288
            Pseudo Genes (internal stop)      :: 43 of 288
            Pseudo Genes (multiple problems)  :: 57 of 288
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5664924
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="ST38"
                     /isolation_source="Carcasses"
                     /host="Gallus gallus domesticus"
                     /db_xref="taxon:562"
                     /geo_loc_name="Brazil: Minas Gerais"
                     /collection_date="2024"
                     /collected_by="LAEV - UFMG"
WGS         JBRKUC010000001-JBRKUC010000231
WGS_SCAFLD  NZ_JBRKUC010000001-NZ_JBRKUC010000231
//
LOCUS       NZ_JAPZGV010000000   4857550 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain EC38, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAPZGV000000000
VERSION     NZ_JAPZGV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32065189
            Assembly: GCF_029088185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4857550)
  AUTHORS   Wen,R. and Wei,H.
  TITLE     The prevalence of carbapenem-resistant bacteria in aquaculture in
            China and the genetic diversity of carbapenem-resistant genes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4857550)
  AUTHORS   Wen,R. and Wei,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-DEC-2022) College of Life Science, Sichuan
            University, Wangjiang Road 29, Chengdu 610064, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAPZGV000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JAPZGV000000000.  This version of the project
            (01) has the accession number NZ_JAPZGV010000000, and consists of
            sequences JAPZGV010000001-JAPZGV010000234.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029088185.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:57:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,902
            CDSs (total)                      :: 4,817
            Genes (coding)                    :: 4,551
            CDSs (with protein)               :: 4,551
            Genes (RNA)                       :: 85
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 2, 2 (5S, 16S)
            tRNAs                             :: 70
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 266
            CDSs (without protein)            :: 266
            Pseudo Genes (ambiguous residues) :: 0 of 266
            Pseudo Genes (frameshifted)       :: 57 of 266
            Pseudo Genes (incomplete)         :: 201 of 266
            Pseudo Genes (internal stop)      :: 42 of 266
            Pseudo Genes (multiple problems)  :: 30 of 266
            Pseudo Genes (short protein)      :: 1 of 266
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4857550
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="EC38"
                     /isolation_source="chicken farm"
                     /db_xref="taxon:562"
                     /geo_loc_name="China: Sichuan"
                     /collection_date="2021"
WGS         JAPZGV010000001-JAPZGV010000234
WGS_SCAFLD  NZ_JAPZGV010000001-NZ_JAPZGV010000234
//
LOCUS       NZ_JBIRAK010000000   5002920 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain BTF1T-1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIRAK000000000
VERSION     NZ_JBIRAK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44467142
            Assembly: GCF_056153865.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5002920)
  AUTHORS   Reasoner,S.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JAN-2025) Department of Pathology, Microbiology and
            Immunology, Vanderbilt University Medical Center, 1211 21st Avenue
            South, Nashville, TN 37212, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIRAK000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIRAK000000000.  This version of the project
            (01) has the accession number NZ_JBIRAK010000000, and consists of
            sequences JBIRAK010000001-JBIRAK010000059.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 147x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056153865.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:01:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,889
            CDSs (total)                      :: 4,806
            Genes (coding)                    :: 4,602
            CDSs (with protein)               :: 4,602
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 204
            CDSs (without protein)            :: 204
            Pseudo Genes (ambiguous residues) :: 0 of 204
            Pseudo Genes (frameshifted)       :: 83 of 204
            Pseudo Genes (incomplete)         :: 139 of 204
            Pseudo Genes (internal stop)      :: 38 of 204
            Pseudo Genes (multiple problems)  :: 49 of 204
            Pseudo Genes (short protein)      :: 1 of 204
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5002920
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="BTF1T-1"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA: Nashville, TN"
                     /lat_lon="36.1424 N 86.8014 W"
                     /collection_date="2022-02"
                     /collected_by="VUMC Urology"
WGS         JBIRAK010000001-JBIRAK010000059
WGS_SCAFLD  NZ_JBIRAK010000001-NZ_JBIRAK010000059
//
LOCUS       NZ_BAAFKQ010000000   5125723 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain KYE064, whole genome shotgun sequencing
            project.
ACCESSION   NZ_BAAFKQ000000000
VERSION     NZ_BAAFKQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMD00792101
            Assembly: GCF_042851355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1
  AUTHORS   Mayuko,T., Hanawa,T., Suda,T., Le,N.M., Kondo,K., Azam,A.H.,
            Kiga,K., Yonetani,S., Yashiro,R., Omori,T., Tanji,Y. and Matsuda,T.
  TITLE     Virulence-associated genes of ST131 and non-ST131 clones of
            ESBL-producing Escherichia coli isolated from the blood of urinary
            tract infections
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5125723)
  AUTHORS   Hanawa,T., Matsuda,T., Mayuko,T. and Suda,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-JUN-2024) Contact:Tomoko Hanawa Kyorin University
            Faculty of Medicine, General Medicine; 6-20-2, Shinkawa, Mitaka,
            Tokyo 1818611, Japan URL :https://www.kyorin-u.ac.jp/
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            BAAFKQ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_BAAFKQ000000000.  This version of the project
            (01) has the accession number NZ_BAAFKQ010000000, and consists of
            sequences BAAFKQ010000001-BAAFKQ010000139.
            Annotated by DFAST https://dfast.ddbj.nig.ac.jp/
            
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Shovill v. 1.1.0
            Genome Coverage       :: 119x
            Sequencing Technology :: DNBSEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_042851355.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:01:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,159
            CDSs (total)                      :: 5,045
            Genes (coding)                    :: 4,787
            CDSs (with protein)               :: 4,787
            Genes (RNA)                       :: 114
            rRNAs                             :: 7, 6, 11 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 5, 6, 11 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 258
            CDSs (without protein)            :: 258
            Pseudo Genes (ambiguous residues) :: 0 of 258
            Pseudo Genes (frameshifted)       :: 98 of 258
            Pseudo Genes (incomplete)         :: 176 of 258
            Pseudo Genes (internal stop)      :: 37 of 258
            Pseudo Genes (multiple problems)  :: 49 of 258
            Pseudo Genes (short protein)      :: 1 of 258
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5125723
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="KYE064"
                     /serovar="O75:H5"
                     /isolation_source="human blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Japan:Tokyo, Mitaka"
                     /lat_lon="35.67803927 N 139.56697004 E"
                     /collection_date="2022"
                     /collected_by="Kyorin University Hospital"
                     /genotype="phylogroup B2, ST1193"
WGS         BAAFKQ010000001-BAAFKQ010000139
WGS_SCAFLD  NZ_BAAFKQ010000001-NZ_BAAFKQ010000139
//
LOCUS       NZ_JAPZIF010000000   4971652 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain EC2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAPZIF000000000
VERSION     NZ_JAPZIF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32065153
            Assembly: GCF_029088925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4971652)
  AUTHORS   Wen,R. and Wei,H.
  TITLE     The prevalence of carbapenem-resistant bacteria in aquaculture in
            China and the genetic diversity of carbapenem-resistant genes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4971652)
  AUTHORS   Wen,R. and Wei,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-DEC-2022) College of Life Science, Sichuan
            University, Wangjiang Road 29, Chengdu 610064, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAPZIF000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JAPZIF000000000.  This version of the project
            (01) has the accession number NZ_JAPZIF010000000, and consists of
            sequences JAPZIF010000001-JAPZIF010000179.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029088925.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:55:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,003
            CDSs (total)                      :: 4,918
            Genes (coding)                    :: 4,687
            CDSs (with protein)               :: 4,687
            Genes (RNA)                       :: 85
            rRNAs                             :: 1, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 3 (16S)
            tRNAs                             :: 70
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 231
            CDSs (without protein)            :: 231
            Pseudo Genes (ambiguous residues) :: 0 of 231
            Pseudo Genes (frameshifted)       :: 61 of 231
            Pseudo Genes (incomplete)         :: 156 of 231
            Pseudo Genes (internal stop)      :: 35 of 231
            Pseudo Genes (multiple problems)  :: 19 of 231
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4971652
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="EC2"
                     /isolation_source="swine farm"
                     /db_xref="taxon:562"
                     /geo_loc_name="China: Yunnan"
                     /collection_date="2021"
WGS         JAPZIF010000001-JAPZIF010000179
WGS_SCAFLD  NZ_JAPZIF010000001-NZ_JAPZIF010000179
//
LOCUS       NZ_JBRWZZ010000000   4810288 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain MEI4BO-21, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBRWZZ000000000
VERSION     NZ_JBRWZZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50713134
            Assembly: GCF_056155365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4810288)
  AUTHORS   Spahr,Y., Collaud,A. and Perreten,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2025) Institute of Veterinary Bacteriology,
            University of Bern, Laenggassstrasse 122, Bern 3012, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWZZ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBRWZZ000000000.  This version of the project
            (01) has the accession number NZ_JBRWZZ010000000, and consists of
            sequences JBRWZZ010000001-JBRWZZ010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Autocycler v. 0.5.2; Polypolish v. 0.6.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 248.206007166307x
            Sequencing Technology  :: Oxford Nanopore MinION; Illumina NovaSeq
                                      6000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155365.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:25:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,691
            CDSs (total)                      :: 4,571
            Genes (coding)                    :: 4,371
            CDSs (with protein)               :: 4,371
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 200
            CDSs (without protein)            :: 200
            Pseudo Genes (ambiguous residues) :: 0 of 200
            Pseudo Genes (frameshifted)       :: 59 of 200
            Pseudo Genes (incomplete)         :: 149 of 200
            Pseudo Genes (internal stop)      :: 35 of 200
            Pseudo Genes (multiple problems)  :: 37 of 200
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4810288
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="MEI4BO-21"
                     /isolation_source="Soil surface"
                     /db_xref="taxon:562"
                     /geo_loc_name="Switzerland: Bern"
                     /collection_date="2021-05"
                     /collected_by="Veterinary staff"
WGS         JBRWZZ010000001-JBRWZZ010000002
WGS_SCAFLD  NZ_CM149565
WGS_SCAFLD  NZ_JBRWZZ010000002
//
LOCUS       NZ_JBRXAG010000000   5039341 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain MEI3A-1023, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBRXAG000000000
VERSION     NZ_JBRXAG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50713127
            Assembly: GCF_056155505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5039341)
  AUTHORS   Spahr,Y., Collaud,A. and Perreten,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2025) Institute of Veterinary Bacteriology,
            University of Bern, Laenggassstrasse 122, Bern 3012, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRXAG000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBRXAG000000000.  This version of the project
            (01) has the accession number NZ_JBRXAG010000000, and consists of
            sequences JBRXAG010000001-JBRXAG010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Autocycler v. 0.5.2; Polypolish v. 0.6.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 304.927643302496x
            Sequencing Technology  :: Oxford Nanopore MinION; Illumina NovaSeq
                                      6000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155505.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:24:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,976
            CDSs (total)                      :: 4,853
            Genes (coding)                    :: 4,677
            CDSs (with protein)               :: 4,677
            Genes (RNA)                       :: 123
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 176
            CDSs (without protein)            :: 176
            Pseudo Genes (ambiguous residues) :: 0 of 176
            Pseudo Genes (frameshifted)       :: 62 of 176
            Pseudo Genes (incomplete)         :: 110 of 176
            Pseudo Genes (internal stop)      :: 35 of 176
            Pseudo Genes (multiple problems)  :: 28 of 176
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5039341
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="MEI3A-1023"
                     /isolation_source="Soil surface"
                     /db_xref="taxon:562"
                     /geo_loc_name="Switzerland: Bern"
                     /collection_date="2023-10"
                     /collected_by="Veterinary staff"
WGS         JBRXAG010000001-JBRXAG010000004
WGS_SCAFLD  NZ_CM149572
WGS_SCAFLD  NZ_JBRXAG010000002-NZ_JBRXAG010000004
//
LOCUS       NZ_LRXQ01000000      4974164 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CD121, whole genome shotgun sequencing
            project.
ACCESSION   NZ_LRXQ00000000
VERSION     NZ_LRXQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04449836
            Assembly: GCF_001571595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4974164)
  AUTHORS   Desilets,M., Deng,X., Rao,C., Ensminger,A.W., Krause,D.O.,
            Sherman,P.M. and Gray-Owen,S.D.
  TITLE     Genome-based Definition of an Inflammatory Bowel Disease-associated
            Adherent-Invasive Escherichia coli Pathovar
  JOURNAL   Inflamm Bowel Dis 22 (1), 1-12 (2016)
   PUBMED   26444104
  REMARK    Erratum:[Inflamm Bowel Dis. 2016 Feb;22(2):E10. Deng, Xiangding
            [corrected to Deng, Xianding]]
REFERENCE   2  (bases 1 to 4974164)
  AUTHORS   Desilets,M.J., Deng,X. and Gray-Owen,S.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2016) Molecular Genetics, University of Toronto,
            1 King's College Cir, Toronto, Ontario M5S 1A8, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LRXQ00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_LRXQ00000000.  This version of the project
            (01) has the accession number NZ_LRXQ01000000, and consists of
            sequences LRXQ01000001-LRXQ01000108.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. MAY-2013
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 600.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001571595.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:03:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,895
            CDSs (total)                      :: 4,820
            Genes (coding)                    :: 4,602
            CDSs (with protein)               :: 4,602
            Genes (RNA)                       :: 75
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 66
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 218
            CDSs (without protein)            :: 218
            Pseudo Genes (ambiguous residues) :: 0 of 218
            Pseudo Genes (frameshifted)       :: 70 of 218
            Pseudo Genes (incomplete)         :: 143 of 218
            Pseudo Genes (internal stop)      :: 40 of 218
            Pseudo Genes (multiple problems)  :: 28 of 218
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4974164
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CD121"
                     /isolation_source="Crohn's disease patient gut tissue
                     biopsy"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Canada: Winnipeg"
                     /lat_lon="49.90 N 97.14 W"
                     /collection_date="2006"
                     /collected_by="University of Manitoba"
                     /genotype="F"
WGS         LRXQ01000001-LRXQ01000108
WGS_SCAFLD  NZ_LRXQ01000001-NZ_LRXQ01000108
//
LOCUS       NZ_JBRKUB010000000   5291310 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain ST1485, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBRKUB000000000
VERSION     NZ_JBRKUB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52211348
            Assembly: GCF_056156025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5291310)
  AUTHORS   Zanon,I.P. and Silva,R.O.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-OCT-2025) Department of Preventive Veterinary
            Medicine, Federal University of Minas Gerais, Avenida Antonio
            Carlos, Belo Horizonte, Minas Gerais 31270901, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRKUB000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBRKUB000000000.  This version of the project
            (01) has the accession number NZ_JBRKUB010000000, and consists of
            sequences JBRKUB010000001-JBRKUB010000086.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 102.99x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056156025.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:30:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,125
            CDSs (total)                      :: 5,034
            Genes (coding)                    :: 4,856
            CDSs (with protein)               :: 4,856
            Genes (RNA)                       :: 91
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 82
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 178
            CDSs (without protein)            :: 178
            Pseudo Genes (ambiguous residues) :: 0 of 178
            Pseudo Genes (frameshifted)       :: 64 of 178
            Pseudo Genes (incomplete)         :: 126 of 178
            Pseudo Genes (internal stop)      :: 24 of 178
            Pseudo Genes (multiple problems)  :: 31 of 178
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5291310
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="ST1485"
                     /isolation_source="Carcasses"
                     /host="Gallus gallus domesticus"
                     /db_xref="taxon:562"
                     /geo_loc_name="Brazil: Minas Gerais"
                     /collection_date="2024"
                     /collected_by="LAEV - UFMG"
WGS         JBRKUB010000001-JBRKUB010000086
WGS_SCAFLD  NZ_JBRKUB010000001-NZ_JBRKUB010000086
//
LOCUS       NZ_JBRWZY010000000   5103232 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain MEI4O1-23, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBRWZY000000000
VERSION     NZ_JBRWZY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50713135
            Assembly: GCF_056155345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5103232)
  AUTHORS   Spahr,Y., Collaud,A. and Perreten,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2025) Institute of Veterinary Bacteriology,
            University of Bern, Laenggassstrasse 122, Bern 3012, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWZY000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBRWZY000000000.  This version of the project
            (01) has the accession number NZ_JBRWZY010000000, and consists of
            sequences JBRWZY010000001-JBRWZY010000003.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Autocycler v. 0.5.2; Polypolish v. 0.6.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 168.723094109772x
            Sequencing Technology  :: Oxford Nanopore MinION; Illumina NovaSeq
                                      6000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155345.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:30:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,016
            CDSs (total)                      :: 4,896
            Genes (coding)                    :: 4,732
            CDSs (with protein)               :: 4,732
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 164
            CDSs (without protein)            :: 164
            Pseudo Genes (ambiguous residues) :: 0 of 164
            Pseudo Genes (frameshifted)       :: 65 of 164
            Pseudo Genes (incomplete)         :: 96 of 164
            Pseudo Genes (internal stop)      :: 37 of 164
            Pseudo Genes (multiple problems)  :: 31 of 164
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5103232
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="MEI4O1-23"
                     /isolation_source="Soil surface"
                     /db_xref="taxon:562"
                     /geo_loc_name="Switzerland: Bern"
                     /collection_date="2023-01"
                     /collected_by="Veterinary staff"
WGS         JBRWZY010000001-JBRWZY010000003
WGS_SCAFLD  NZ_CM149564
WGS_SCAFLD  NZ_JBRWZY010000002-NZ_JBRWZY010000003
//
LOCUS       NZ_NLSA01000000      5830788 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain MOD1-EC5114, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NLSA00000000
VERSION     NZ_NLSA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04448469
            Assembly: GCF_002231365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5830788)
  AUTHORS   Gangiredla,J., Mammel,M.K., Barnaba,T.J., Tartera,C., Gebru,S.T.,
            Patel,I.R., Leonard,S.R., Kotewicz,M.L., Lampel,K.A., Elkins,C.A.
            and Lacher,D.W.
  TITLE     Species-Wide Collection of Escherichia coli Isolates for
            Examination of Genomic Diversity
  JOURNAL   Genome Announc 5 (50), e01321-17 (2017)
   PUBMED   29242221
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5830788)
  AUTHORS   Gangiredla,J., Barnaba,T., Gebru,S., Mammel,M.K., Lacher,D.,
            Tartera,C., Patel,I.R., Leonard,S., Lampel,K.A. and Elkins,C.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JUN-2017) CFSAN-ORS-DM-MMSB, US Food and Drug
            Administration, 5100 Paint Branch Parkway, College Park, MD 20740,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NLSA00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_NLSA00000000.  This version of the project
            (01) has the accession number NZ_NLSA01000000, and consists of
            sequences NLSA01000001-NLSA01000501.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 62.2x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002231365.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:24:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,116
            CDSs (total)                      :: 6,035
            Genes (coding)                    :: 5,638
            CDSs (with protein)               :: 5,638
            Genes (RNA)                       :: 81
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 68
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 397
            CDSs (without protein)            :: 397
            Pseudo Genes (ambiguous residues) :: 0 of 397
            Pseudo Genes (frameshifted)       :: 97 of 397
            Pseudo Genes (incomplete)         :: 305 of 397
            Pseudo Genes (internal stop)      :: 35 of 397
            Pseudo Genes (multiple problems)  :: 38 of 397
            Pseudo Genes (short protein)      :: 1 of 397
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5830788
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="MOD1-EC5114"
                     /isolation_source="intestine white-tailed deer"
                     /host="Odocoileus virginianus"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA"
                     /collection_date="2006-03-27"
                     /collected_by="Pennsylvania State University| Escherichia
                     coli Reference Center"
WGS         NLSA01000001-NLSA01000501
WGS_SCAFLD  NZ_NLSA01000001-NZ_NLSA01000501
//
LOCUS       NZ_JBJKEL010000000   5292849 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 32, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKEL000000000
VERSION     NZ_JBJKEL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44631458
            Assembly: GCF_045505265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5292849)
  AUTHORS   Dixon,B.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-NOV-2024) Division of Immunology, Immunity to
            Infection and Respiratory Medicine, University of Manchester,
            Princess Street, Manchester m17DN, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKEL000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJKEL000000000.  This version of the project
            (01) has the accession number NZ_JBJKEL010000000, and consists of
            sequences JBJKEL010000001-JBJKEL010000421.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 63x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045505265.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:33:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,408
            CDSs (total)                      :: 5,284
            Genes (coding)                    :: 5,000
            CDSs (with protein)               :: 5,000
            Genes (RNA)                       :: 124
            rRNAs                             :: 8, 8, 12 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1 (5S, 16S)
            partial rRNAs                     :: 2, 7, 12 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 284
            CDSs (without protein)            :: 284
            Pseudo Genes (ambiguous residues) :: 0 of 284
            Pseudo Genes (frameshifted)       :: 80 of 284
            Pseudo Genes (incomplete)         :: 204 of 284
            Pseudo Genes (internal stop)      :: 45 of 284
            Pseudo Genes (multiple problems)  :: 42 of 284
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5292849
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="32"
                     /isolation_source="Rectal Swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="United Kingdom: London"
                     /collection_date="2017-05"
                     /genotype="ST205"
WGS         JBJKEL010000001-JBJKEL010000421
WGS_SCAFLD  NZ_JBJKEL010000001-NZ_JBJKEL010000421
//
LOCUS       NZ_JBIRAF010000000   5220973 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain BTF10T1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIRAF000000000
VERSION     NZ_JBIRAF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44467137
            Assembly: GCF_056153965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5220973)
  AUTHORS   Reasoner,S.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JAN-2025) Department of Pathology, Microbiology and
            Immunology, Vanderbilt University Medical Center, 1211 21st Avenue
            South, Nashville, TN 37212, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIRAF000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIRAF000000000.  This version of the project
            (01) has the accession number NZ_JBIRAF010000000, and consists of
            sequences JBIRAF010000001-JBIRAF010000126.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 144x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056153965.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:01:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,175
            CDSs (total)                      :: 5,090
            Genes (coding)                    :: 4,810
            CDSs (with protein)               :: 4,810
            Genes (RNA)                       :: 85
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 75
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 280
            CDSs (without protein)            :: 280
            Pseudo Genes (ambiguous residues) :: 0 of 280
            Pseudo Genes (frameshifted)       :: 113 of 280
            Pseudo Genes (incomplete)         :: 209 of 280
            Pseudo Genes (internal stop)      :: 46 of 280
            Pseudo Genes (multiple problems)  :: 79 of 280
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5220973
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="BTF10T1"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA: Nashville, TN"
                     /lat_lon="36.1424 N 86.8014 W"
                     /collection_date="2023-10"
                     /collected_by="VUMC Urology"
WGS         JBIRAF010000001-JBIRAF010000126
WGS_SCAFLD  NZ_JBIRAF010000001-NZ_JBIRAF010000126
//
LOCUS       NZ_NKOT01000000      5556180 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain MOD1-EC1664, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NKOT00000000
VERSION     NZ_NKOT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05607379
            Assembly: GCF_002459935.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5556180)
  AUTHORS   Gangiredla,J., Mammel,M.K., Barnaba,T.J., Tartera,C., Gebru,S.T.,
            Patel,I.R., Leonard,S.R., Kotewicz,M.L., Lampel,K.A., Elkins,C.A.
            and Lacher,D.W.
  TITLE     Species-Wide Collection of Escherichia coli Isolates for
            Examination of Genomic Diversity
  JOURNAL   Genome Announc 5 (50), e01321-17 (2017)
   PUBMED   29242221
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5556180)
  AUTHORS   Gangiredla,J., Barnaba,T., Gebru,S., Mammel,M.K., Lacher,D.,
            Tartera,C., Patel,I.R., Leonard,S., Lampel,K.A. and Elkins,C.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JUN-2017) CFSAN-ORS-DM-MMSB, US Food and Drug
            Administration, 5100 Paint Branch Parkway, College Park, MD 20740,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NKOT00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_NKOT00000000.  This version of the project
            (01) has the accession number NZ_NKOT01000000, and consists of
            sequences NKOT01000001-NKOT01000485.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 40.7x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002459935.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:07:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,012
            CDSs (total)                      :: 5,915
            Genes (coding)                    :: 5,481
            CDSs (with protein)               :: 5,481
            Genes (RNA)                       :: 97
            rRNAs                             :: 4, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 1 (5S, 16S)
            tRNAs                             :: 79
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 434
            CDSs (without protein)            :: 434
            Pseudo Genes (ambiguous residues) :: 0 of 434
            Pseudo Genes (frameshifted)       :: 124 of 434
            Pseudo Genes (incomplete)         :: 317 of 434
            Pseudo Genes (internal stop)      :: 62 of 434
            Pseudo Genes (multiple problems)  :: 61 of 434
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5556180
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="MOD1-EC1664"
                     /serotype="O26:H11"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA"
                     /collection_date="2000"
                     /collected_by="Michigan State University"
WGS         NKOT01000001-NKOT01000485
WGS_SCAFLD  NZ_NKOT01000001-NZ_NKOT01000485
//
LOCUS       NZ_JBRKUA010000000   5596395 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain ST295, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBRKUA000000000
VERSION     NZ_JBRKUA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52211349
            Assembly: GCF_056156005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5596395)
  AUTHORS   Zanon,I.P. and Silva,R.O.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-OCT-2025) Department of Preventive Veterinary
            Medicine, Federal University of Minas Gerais, Avenida Antonio
            Carlos, Belo Horizonte, Minas Gerais 31270901, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRKUA000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBRKUA000000000.  This version of the project
            (01) has the accession number NZ_JBRKUA010000000, and consists of
            sequences JBRKUA010000001-JBRKUA010000263.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 99.95x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056156005.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:23:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,700
            CDSs (total)                      :: 5,606
            Genes (coding)                    :: 5,269
            CDSs (with protein)               :: 5,269
            Genes (RNA)                       :: 94
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 132 of 337
            Pseudo Genes (incomplete)         :: 211 of 337
            Pseudo Genes (internal stop)      :: 66 of 337
            Pseudo Genes (multiple problems)  :: 64 of 337
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5596395
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="ST295"
                     /isolation_source="Carcasses"
                     /host="Gallus gallus domesticus"
                     /db_xref="taxon:562"
                     /geo_loc_name="Brazil: Minas Gerais"
                     /collection_date="2024"
                     /collected_by="LAEV - UFMG"
WGS         JBRKUA010000001-JBRKUA010000263
WGS_SCAFLD  NZ_JBRKUA010000001-NZ_JBRKUA010000263
//
LOCUS       NZ_JBJLOM010000000   4930363 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 1024606, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLOM000000000
VERSION     NZ_JBJLOM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061610
            Assembly: GCF_045569375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4930363)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4930363)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLOM000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLOM000000000.  This version of the project
            (01) has the accession number NZ_JBJLOM010000000, and consists of
            sequences JBJLOM010000001-JBJLOM010000106.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.15
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045569375.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:42:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,902
            CDSs (total)                      :: 4,810
            Genes (coding)                    :: 4,675
            CDSs (with protein)               :: 4,675
            Genes (RNA)                       :: 92
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 3 (16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 135
            CDSs (without protein)            :: 135
            Pseudo Genes (ambiguous residues) :: 0 of 135
            Pseudo Genes (frameshifted)       :: 56 of 135
            Pseudo Genes (incomplete)         :: 79 of 135
            Pseudo Genes (internal stop)      :: 27 of 135
            Pseudo Genes (multiple problems)  :: 24 of 135
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4930363
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="1024606"
                     /isolation_source="RECTAL SWAB"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-09-27"
                     /collected_by="HUMS"
WGS         JBJLOM010000001-JBJLOM010000106
WGS_SCAFLD  NZ_JBJLOM010000001-NZ_JBJLOM010000106
//
LOCUS       NZ_JZQU01000000      5238046 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain HT2012095, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JZQU00000000
VERSION     NZ_JZQU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03387936
            Assembly: GCF_002972615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5238046)
  AUTHORS   Lu,S., Jin,D., Wu,S., Yang,J., Lan,R., Bai,X., Liu,S., Meng,Q.,
            Yuan,X., Zhou,J., Pu,J., Chen,Q., Dai,H., Hu,Y., Xiong,Y., Ye,C.
            and Xu,J.
  TITLE     Insights into the evolution of pathogenicity of Escherichia coli
            from genomic analysis of intestinal E. coli of Marmota himalayana
            in Qinghai-Tibet plateau of China
  JOURNAL   Emerg Microbes Infect 5 (12), e122 (2016)
   PUBMED   27924811
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5238046)
  AUTHORS   Xu,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-MAR-2015) New pathogen brach, National institute for
            communicable disease control and prevention, P.O. Box 5 Changping,
            Beijing, Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JZQU00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JZQU00000000.  This version of the project
            (01) has the accession number NZ_JZQU01000000, and consists of
            sequences JZQU01000001-JZQU01000160.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. April 2014
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 40.0x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002972615.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:08:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,430
            CDSs (total)                      :: 5,346
            Genes (coding)                    :: 5,024
            CDSs (with protein)               :: 5,024
            Genes (RNA)                       :: 84
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 322
            CDSs (without protein)            :: 322
            Pseudo Genes (ambiguous residues) :: 0 of 322
            Pseudo Genes (frameshifted)       :: 104 of 322
            Pseudo Genes (incomplete)         :: 250 of 322
            Pseudo Genes (internal stop)      :: 38 of 322
            Pseudo Genes (multiple problems)  :: 63 of 322
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5238046
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="HT2012095"
                     /isolation_source="animal"
                     /db_xref="taxon:562"
                     /geo_loc_name="China"
                     /collection_date="2012"
WGS         JZQU01000001-JZQU01000160
WGS_SCAFLD  NZ_JZQU01000001-NZ_JZQU01000160
//
LOCUS       NZ_JBIRAE010000000   4770009 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain BTF61T3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIRAE000000000
VERSION     NZ_JBIRAE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44467136
            Assembly: GCF_056154005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4770009)
  AUTHORS   Reasoner,S.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JAN-2025) Department of Pathology, Microbiology and
            Immunology, Vanderbilt University Medical Center, 1211 21st Avenue
            South, Nashville, TN 37212, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIRAE000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIRAE000000000.  This version of the project
            (01) has the accession number NZ_JBIRAE010000000, and consists of
            sequences JBIRAE010000001-JBIRAE010000075.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 145x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154005.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:56:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,587
            CDSs (total)                      :: 4,498
            Genes (coding)                    :: 4,389
            CDSs (with protein)               :: 4,389
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 39 of 109
            Pseudo Genes (incomplete)         :: 73 of 109
            Pseudo Genes (internal stop)      :: 13 of 109
            Pseudo Genes (multiple problems)  :: 14 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4770009
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="BTF61T3"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA: Nashville, TN"
                     /lat_lon="36.1424 N 86.8014 W"
                     /collection_date="2024-08"
                     /collected_by="VUMC Urology"
WGS         JBIRAE010000001-JBIRAE010000075
WGS_SCAFLD  NZ_JBIRAE010000001-NZ_JBIRAE010000075
//
LOCUS       NZ_JBJKEK010000000   5141105 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 33, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKEK000000000
VERSION     NZ_JBJKEK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44631459
            Assembly: GCF_045505235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5141105)
  AUTHORS   Dixon,B.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-NOV-2024) Division of Immunology, Immunity to
            Infection and Respiratory Medicine, University of Manchester,
            Princess Street, Manchester m17DN, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKEK000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJKEK000000000.  This version of the project
            (01) has the accession number NZ_JBJKEK010000000, and consists of
            sequences JBJKEK010000001-JBJKEK010000084.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 96x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045505235.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:25:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,148
            CDSs (total)                      :: 5,022
            Genes (coding)                    :: 4,770
            CDSs (with protein)               :: 4,770
            Genes (RNA)                       :: 126
            rRNAs                             :: 7, 10, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 7 (5S)
            partial rRNAs                     :: 10, 7 (16S, 23S)
            tRNAs                             :: 95
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 252
            CDSs (without protein)            :: 252
            Pseudo Genes (ambiguous residues) :: 0 of 252
            Pseudo Genes (frameshifted)       :: 78 of 252
            Pseudo Genes (incomplete)         :: 161 of 252
            Pseudo Genes (internal stop)      :: 48 of 252
            Pseudo Genes (multiple problems)  :: 31 of 252
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5141105
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="33"
                     /isolation_source="Wound Infection"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="United Kingdom: Bristol"
                     /collection_date="2016-06"
                     /genotype="ST361"
WGS         JBJKEK010000001-JBJKEK010000084
WGS_SCAFLD  NZ_JBJKEK010000001-NZ_JBJKEK010000084
//
LOCUS       NZ_JBIRAL010000000   5120887 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain BTF1T1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIRAL000000000
VERSION     NZ_JBIRAL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44467143
            Assembly: GCF_056153845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5120887)
  AUTHORS   Reasoner,S.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JAN-2025) Department of Pathology, Microbiology and
            Immunology, Vanderbilt University Medical Center, 1211 21st Avenue
            South, Nashville, TN 37212, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIRAL000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIRAL000000000.  This version of the project
            (01) has the accession number NZ_JBIRAL010000000, and consists of
            sequences JBIRAL010000001-JBIRAL010000107.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 147x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056153845.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:02:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,078
            CDSs (total)                      :: 4,987
            Genes (coding)                    :: 4,753
            CDSs (with protein)               :: 4,753
            Genes (RNA)                       :: 91
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 234
            CDSs (without protein)            :: 234
            Pseudo Genes (ambiguous residues) :: 0 of 234
            Pseudo Genes (frameshifted)       :: 85 of 234
            Pseudo Genes (incomplete)         :: 160 of 234
            Pseudo Genes (internal stop)      :: 43 of 234
            Pseudo Genes (multiple problems)  :: 48 of 234
            Pseudo Genes (short protein)      :: 1 of 234
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5120887
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="BTF1T1"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA: Nashville, TN"
                     /lat_lon="36.1424 N 86.8014 W"
                     /collection_date="2023-09"
                     /collected_by="VUMC Urology"
WGS         JBIRAL010000001-JBIRAL010000107
WGS_SCAFLD  NZ_JBIRAL010000001-NZ_JBIRAL010000107
//
LOCUS       NZ_JBRWZO010000000   5197313 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain MEI148-20EC, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWZO000000000
VERSION     NZ_JBRWZO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50713145
            Assembly: GCF_056155145.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5197313)
  AUTHORS   Spahr,Y., Collaud,A. and Perreten,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2025) Institute of Veterinary Bacteriology,
            University of Bern, Laenggassstrasse 122, Bern 3012, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWZO000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBRWZO000000000.  This version of the project
            (01) has the accession number NZ_JBRWZO010000000, and consists of
            sequences JBRWZO010000001-JBRWZO010000005.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Autocycler v. 0.5.2; Polypolish v. 0.6.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 209.319501038325x
            Sequencing Technology  :: Oxford Nanopore MinION; Illumina NovaSeq
                                      6000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155145.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:36:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,127
            CDSs (total)                      :: 5,008
            Genes (coding)                    :: 4,845
            CDSs (with protein)               :: 4,845
            Genes (RNA)                       :: 119
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 163
            CDSs (without protein)            :: 163
            Pseudo Genes (ambiguous residues) :: 0 of 163
            Pseudo Genes (frameshifted)       :: 69 of 163
            Pseudo Genes (incomplete)         :: 97 of 163
            Pseudo Genes (internal stop)      :: 34 of 163
            Pseudo Genes (multiple problems)  :: 32 of 163
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5197313
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="MEI148-20EC"
                     /isolation_source="Soil surface"
                     /db_xref="taxon:562"
                     /geo_loc_name="Switzerland: Bern"
                     /collection_date="2020-03"
                     /collected_by="Veterinary staff"
WGS         JBRWZO010000001-JBRWZO010000005
WGS_SCAFLD  NZ_CM149554
WGS_SCAFLD  NZ_JBRWZO010000002-NZ_JBRWZO010000005
//
LOCUS       NZ_JABBJI010000000   5229326 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain B175, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JABBJI000000000
VERSION     NZ_JABBJI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14604249
            Assembly: GCF_012978595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5229326)
  AUTHORS   Guerin,F. and Cattoir,V.
  TITLE     Fosfomycine resistance
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5229326)
  AUTHORS   Guerin,F. and Cattoir,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-APR-2020) Bacteriology Laboratory, Rennes Hospital, 2
            rue Henri Le Guilloux, Rennes 35033, France
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JABBJI000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JABBJI000000000.  This version of the project
            (01) has the accession number NZ_JABBJI010000000, and consists of
            sequences JABBJI010000001-JABBJI010000925.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_012978595.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:31:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,612
            CDSs (total)                      :: 5,545
            Genes (coding)                    :: 5,011
            CDSs (with protein)               :: 5,011
            Genes (RNA)                       :: 67
            rRNAs                             :: 1, 2 (16S, 23S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 534
            CDSs (without protein)            :: 534
            Pseudo Genes (ambiguous residues) :: 0 of 534
            Pseudo Genes (frameshifted)       :: 96 of 534
            Pseudo Genes (incomplete)         :: 450 of 534
            Pseudo Genes (internal stop)      :: 50 of 534
            Pseudo Genes (multiple problems)  :: 55 of 534
            Pseudo Genes (short protein)      :: 1 of 534
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5229326
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="B175"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="France"
                     /collection_date="2016"
                     /collected_by="Bichat"
WGS         JABBJI010000001-JABBJI010000925
WGS_SCAFLD  NZ_JABBJI010000001-NZ_JABBJI010000925
//
LOCUS       NZ_JBRXAP010000000   5009597 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain MEI1O2-23, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBRXAP000000000
VERSION     NZ_JBRXAP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50713118
            Assembly: GCF_056155595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5009597)
  AUTHORS   Spahr,Y., Collaud,A. and Perreten,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2025) Institute of Veterinary Bacteriology,
            University of Bern, Laenggassstrasse 122, Bern 3012, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRXAP000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBRXAP000000000.  This version of the project
            (01) has the accession number NZ_JBRXAP010000000, and consists of
            sequences JBRXAP010000001-JBRXAP010000005.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Autocycler v. 0.5.2; Polypolish v. 0.6.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 192.999117493882x
            Sequencing Technology  :: Oxford Nanopore MinION; Illumina NovaSeq
                                      6000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155595.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:28:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,916
            CDSs (total)                      :: 4,801
            Genes (coding)                    :: 4,681
            CDSs (with protein)               :: 4,681
            Genes (RNA)                       :: 115
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 120
            CDSs (without protein)            :: 120
            Pseudo Genes (ambiguous residues) :: 0 of 120
            Pseudo Genes (frameshifted)       :: 52 of 120
            Pseudo Genes (incomplete)         :: 73 of 120
            Pseudo Genes (internal stop)      :: 25 of 120
            Pseudo Genes (multiple problems)  :: 27 of 120
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5009597
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="MEI1O2-23"
                     /isolation_source="Soil surface"
                     /db_xref="taxon:562"
                     /geo_loc_name="Switzerland: Bern"
                     /collection_date="2023-01"
                     /collected_by="Veterinary staff"
WGS         JBRXAP010000001-JBRXAP010000005
WGS_SCAFLD  NZ_CM149577
WGS_SCAFLD  NZ_JBRXAP010000002-NZ_JBRXAP010000005
//
LOCUS       NZ_JBJLOL010000000   5361408 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 1076771, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLOL000000000
VERSION     NZ_JBJLOL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061611
            Assembly: GCF_045569355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5361408)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5361408)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLOL000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLOL000000000.  This version of the project
            (01) has the accession number NZ_JBJLOL010000000, and consists of
            sequences JBJLOL010000001-JBJLOL010000274.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.16
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045569355.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:44:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,451
            CDSs (total)                      :: 5,356
            Genes (coding)                    :: 5,108
            CDSs (with protein)               :: 5,108
            Genes (RNA)                       :: 95
            rRNAs                             :: 3, 2 (16S, 23S)
            partial rRNAs                     :: 3, 2 (16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 248
            CDSs (without protein)            :: 248
            Pseudo Genes (ambiguous residues) :: 0 of 248
            Pseudo Genes (frameshifted)       :: 61 of 248
            Pseudo Genes (incomplete)         :: 196 of 248
            Pseudo Genes (internal stop)      :: 33 of 248
            Pseudo Genes (multiple problems)  :: 39 of 248
            Pseudo Genes (short protein)      :: 1 of 248
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5361408
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="1076771"
                     /isolation_source="RECTAL SWAB"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-12-04"
                     /collected_by="HUMS"
WGS         JBJLOL010000001-JBJLOL010000274
WGS_SCAFLD  NZ_JBJLOL010000001-NZ_JBJLOL010000274
//
LOCUS       NZ_JBIGOL010000000   5008288 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E253, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGOL000000000
VERSION     NZ_JBIGOL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130587
            Assembly: GCF_045573105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5008288)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGOL000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGOL000000000.  This version of the project
            (01) has the accession number NZ_JBIGOL010000000, and consists of
            sequences JBIGOL010000001-JBIGOL010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 634x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045573105.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:47:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,850
            CDSs (total)                      :: 4,728
            Genes (coding)                    :: 4,557
            CDSs (with protein)               :: 4,557
            Genes (RNA)                       :: 122
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 87
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 171
            CDSs (without protein)            :: 171
            Pseudo Genes (ambiguous residues) :: 0 of 171
            Pseudo Genes (frameshifted)       :: 107 of 171
            Pseudo Genes (incomplete)         :: 78 of 171
            Pseudo Genes (internal stop)      :: 12 of 171
            Pseudo Genes (multiple problems)  :: 24 of 171
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5008288
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E253"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGOL010000001-JBIGOL010000006
WGS_SCAFLD  NZ_JBIGOL010000001-NZ_JBIGOL010000006
//
LOCUS       NZ_JUDM01000000      4902042 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CVM N33601PS, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JUDM00000000
VERSION     NZ_JUDM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03177621
            Assembly: GCF_000798595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4902042)
  AUTHORS   Tyson,G.H., McDermott,P.F., Li,C., Chen,Y., Tadesse,D.A.,
            Mukherjee,S., Bodeis-Jones,S., Kabera,C., Gaines,S.A.,
            Loneragan,G.H., Edrington,T.S., Torrence,M., Harhay,D.M. and
            Zhao,S.
  TITLE     WGS accurately predicts antimicrobial resistance in Escherichia
            coli
  JOURNAL   J Antimicrob Chemother 70 (10), 2763-2769 (2015)
   PUBMED   26142410
REFERENCE   2  (bases 1 to 4902042)
  AUTHORS   Tyson,G.H., McDermott,P.F., Li,C., Tadesse,D.A., Mukherjee,S.,
            Bodeis-Jones,S., Kabera,C., Gaines,S.A., Loneragan,G.H.,
            Edrington,T.S., Torrence,M., Harhay,D.M. and Zhao,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-NOV-2014) CVM, FDA, 8401 Muirkirk Rd, Laurel, MD
            20708, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JUDM00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JUDM00000000.  This version of the project
            (01) has the accession number NZ_JUDM01000000, and consists of
            sequences JUDM01000001-JUDM01000082.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: CLC Genomics Workbench v. 7.5
            Assembly Name         :: Escherichia coli CVM N33601PS v. 1.0
            Genome Coverage       :: 95.0x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000798595.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:38:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,845
            CDSs (total)                      :: 4,752
            Genes (coding)                    :: 4,599
            CDSs (with protein)               :: 4,599
            Genes (RNA)                       :: 93
            rRNAs                             :: 6, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 75
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 153
            CDSs (without protein)            :: 153
            Pseudo Genes (ambiguous residues) :: 0 of 153
            Pseudo Genes (frameshifted)       :: 66 of 153
            Pseudo Genes (incomplete)         :: 89 of 153
            Pseudo Genes (internal stop)      :: 36 of 153
            Pseudo Genes (multiple problems)  :: 34 of 153
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4902042
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CVM N33601PS"
                     /isolation_source="Farm"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA"
                     /collection_date="2011-12-16"
WGS         JUDM01000001-JUDM01000082
WGS_SCAFLD  NZ_JUDM01000001-NZ_JUDM01000082
//
LOCUS       NZ_JWZE01000000      5045187 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CVM N35912PS, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JWZE00000000
VERSION     NZ_JWZE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03177652
            Assembly: GCF_000819165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5045187)
  AUTHORS   Tyson,G.H., McDermott,P.F., Li,C., Chen,Y., Tadesse,D.A.,
            Mukherjee,S., Bodeis-Jones,S., Kabera,C., Gaines,S.A.,
            Loneragan,G.H., Edrington,T.S., Torrence,M., Harhay,D.M. and
            Zhao,S.
  TITLE     WGS accurately predicts antimicrobial resistance in Escherichia
            coli
  JOURNAL   J Antimicrob Chemother 70 (10), 2763-2769 (2015)
   PUBMED   26142410
REFERENCE   2  (bases 1 to 5045187)
  AUTHORS   Tyson,G.H., McDermott,P.F., Li,C., Tadesse,D.A., Mukherjee,S.,
            Bodeis-Jones,S., Kabera,C., Gaines,S.A., Loneragan,G.H.,
            Edrington,T.S., Torrence,M., Harhay,D.M. and Zhao,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-NOV-2014) CVM, FDA, 8401 Muirkirk Rd, Laurel, MD
            20708, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JWZE00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JWZE00000000.  This version of the project
            (01) has the accession number NZ_JWZE01000000, and consists of
            sequences JWZE01000001-JWZE01000120.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: CLC Genomics Workbench v. 7.5
            Assembly Name         :: Escherichia coli CVM N35912PS v1.0
            Genome Coverage       :: 87.6x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000819165.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:44:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,979
            CDSs (total)                      :: 4,884
            Genes (coding)                    :: 4,734
            CDSs (with protein)               :: 4,734
            Genes (RNA)                       :: 95
            rRNAs                             :: 4, 4, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 23S)
            partial rRNAs                     :: 4 (16S)
            tRNAs                             :: 76
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 150
            CDSs (without protein)            :: 150
            Pseudo Genes (ambiguous residues) :: 0 of 150
            Pseudo Genes (frameshifted)       :: 59 of 150
            Pseudo Genes (incomplete)         :: 93 of 150
            Pseudo Genes (internal stop)      :: 31 of 150
            Pseudo Genes (multiple problems)  :: 28 of 150
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5045187
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CVM N35912PS"
                     /isolation_source="Farm"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA"
                     /collection_date="2012-01-13"
WGS         JWZE01000001-JWZE01000120
WGS_SCAFLD  NZ_JWZE01000001-NZ_JWZE01000120
//
LOCUS       NZ_JBIGQD010000000   5471961 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E167, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGQD000000000
VERSION     NZ_JBIGQD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130516
            Assembly: GCF_045573945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5471961)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGQD000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGQD000000000.  This version of the project
            (01) has the accession number NZ_JBIGQD010000000, and consists of
            sequences JBIGQD010000001-JBIGQD010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 382x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045573945.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:50:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,502
            CDSs (total)                      :: 5,388
            Genes (coding)                    :: 5,088
            CDSs (with protein)               :: 5,088
            Genes (RNA)                       :: 114
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 300
            CDSs (without protein)            :: 300
            Pseudo Genes (ambiguous residues) :: 0 of 300
            Pseudo Genes (frameshifted)       :: 143 of 300
            Pseudo Genes (incomplete)         :: 185 of 300
            Pseudo Genes (internal stop)      :: 39 of 300
            Pseudo Genes (multiple problems)  :: 59 of 300
            Pseudo Genes (short protein)      :: 1 of 300
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5471961
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E167"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGQD010000001-JBIGQD010000009
WGS_SCAFLD  NZ_JBIGQD010000001-NZ_JBIGQD010000009
//
LOCUS       NZ_JWYZ01000000      4778879 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CVM N37069PS, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JWYZ00000000
VERSION     NZ_JWYZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03177677
            Assembly: GCF_000819245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4778879)
  AUTHORS   Tyson,G.H., McDermott,P.F., Li,C., Chen,Y., Tadesse,D.A.,
            Mukherjee,S., Bodeis-Jones,S., Kabera,C., Gaines,S.A.,
            Loneragan,G.H., Edrington,T.S., Torrence,M., Harhay,D.M. and
            Zhao,S.
  TITLE     WGS accurately predicts antimicrobial resistance in Escherichia
            coli
  JOURNAL   J Antimicrob Chemother 70 (10), 2763-2769 (2015)
   PUBMED   26142410
REFERENCE   2  (bases 1 to 4778879)
  AUTHORS   Tyson,G.H., McDermott,P.F., Li,C., Tadesse,D.A., Mukherjee,S.,
            Bodeis-Jones,S., Kabera,C., Gaines,S.A., Loneragan,G.H.,
            Edrington,T.S., Torrence,M., Harhay,D.M. and Zhao,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-NOV-2014) CVM, FDA, 8401 Muirkirk Rd, Laurel, MD
            20708, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JWYZ00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JWYZ00000000.  This version of the project
            (01) has the accession number NZ_JWYZ01000000, and consists of
            sequences JWYZ01000001-JWYZ01000187.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: CLC Genomics Workbench v. 7.5
            Assembly Name         :: Escherichia coli CVM N37069PS v1.0
            Genome Coverage       :: 48.5x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000819245.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:46:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,781
            CDSs (total)                      :: 4,683
            Genes (coding)                    :: 4,447
            CDSs (with protein)               :: 4,447
            Genes (RNA)                       :: 98
            rRNAs                             :: 3, 5, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 5, 3 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 236
            CDSs (without protein)            :: 236
            Pseudo Genes (ambiguous residues) :: 0 of 236
            Pseudo Genes (frameshifted)       :: 68 of 236
            Pseudo Genes (incomplete)         :: 165 of 236
            Pseudo Genes (internal stop)      :: 41 of 236
            Pseudo Genes (multiple problems)  :: 34 of 236
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4778879
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CVM N37069PS"
                     /isolation_source="Farm"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA"
                     /collection_date="2012-01-20"
WGS         JWYZ01000001-JWYZ01000187
WGS_SCAFLD  NZ_JWYZ01000001-NZ_JWYZ01000187
//
LOCUS       NZ_JBIGSY010000000   5487345 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E56, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGSY000000000
VERSION     NZ_JBIGSY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130415
            Assembly: GCF_045575475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5487345)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGSY000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGSY000000000.  This version of the project
            (01) has the accession number NZ_JBIGSY010000000, and consists of
            sequences JBIGSY010000001-JBIGSY010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 198x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575475.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:57:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,498
            CDSs (total)                      :: 5,382
            Genes (coding)                    :: 5,069
            CDSs (with protein)               :: 5,069
            Genes (RNA)                       :: 116
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 313
            CDSs (without protein)            :: 313
            Pseudo Genes (ambiguous residues) :: 0 of 313
            Pseudo Genes (frameshifted)       :: 154 of 313
            Pseudo Genes (incomplete)         :: 184 of 313
            Pseudo Genes (internal stop)      :: 38 of 313
            Pseudo Genes (multiple problems)  :: 58 of 313
            Pseudo Genes (short protein)      :: 1 of 313
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5487345
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E56"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGSY010000001-JBIGSY010000008
WGS_SCAFLD  NZ_JBIGSY010000001-NZ_JBIGSY010000008
//
LOCUS       NZ_JWYX01000000      4954991 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CVM N38428PS, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JWYX00000000
VERSION     NZ_JWYX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03177679
            Assembly: GCF_000819265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4954991)
  AUTHORS   Tyson,G.H., McDermott,P.F., Li,C., Chen,Y., Tadesse,D.A.,
            Mukherjee,S., Bodeis-Jones,S., Kabera,C., Gaines,S.A.,
            Loneragan,G.H., Edrington,T.S., Torrence,M., Harhay,D.M. and
            Zhao,S.
  TITLE     WGS accurately predicts antimicrobial resistance in Escherichia
            coli
  JOURNAL   J Antimicrob Chemother 70 (10), 2763-2769 (2015)
   PUBMED   26142410
REFERENCE   2  (bases 1 to 4954991)
  AUTHORS   Tyson,G.H., McDermott,P.F., Li,C., Tadesse,D.A., Mukherjee,S.,
            Bodeis-Jones,S., Kabera,C., Gaines,S.A., Loneragan,G.H.,
            Edrington,T.S., Torrence,M., Harhay,D.M. and Zhao,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-NOV-2014) CVM, FDA, 8401 Muirkirk Rd, Laurel, MD
            20708, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JWYX00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JWYX00000000.  This version of the project
            (01) has the accession number NZ_JWYX01000000, and consists of
            sequences JWYX01000001-JWYX01000146.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: CLC Genomics Workbench v. 7.5
            Assembly Name         :: Escherichia coli CVM N38428PS v1.0
            Genome Coverage       :: 46.2x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000819265.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:46:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,966
            CDSs (total)                      :: 4,873
            Genes (coding)                    :: 4,678
            CDSs (with protein)               :: 4,678
            Genes (RNA)                       :: 93
            rRNAs                             :: 3, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 76
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 195
            CDSs (without protein)            :: 195
            Pseudo Genes (ambiguous residues) :: 0 of 195
            Pseudo Genes (frameshifted)       :: 60 of 195
            Pseudo Genes (incomplete)         :: 133 of 195
            Pseudo Genes (internal stop)      :: 33 of 195
            Pseudo Genes (multiple problems)  :: 27 of 195
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4954991
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CVM N38428PS"
                     /isolation_source="Farm"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA"
                     /collection_date="2012-01-30"
WGS         JWYX01000001-JWYX01000146
WGS_SCAFLD  NZ_JWYX01000001-NZ_JWYX01000146
//
LOCUS       NZ_JBIGVX010000000   5109669 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E613, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGVX000000000
VERSION     NZ_JBIGVX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235593
            Assembly: GCF_045581875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5109669)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGVX000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGVX000000000.  This version of the project
            (01) has the accession number NZ_JBIGVX010000000, and consists of
            sequences JBIGVX010000001-JBIGVX010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 245x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045581875.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:09:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,053
            CDSs (total)                      :: 4,924
            Genes (coding)                    :: 4,613
            CDSs (with protein)               :: 4,613
            Genes (RNA)                       :: 129
            rRNAs                             :: 8, 8, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 88
            ncRNAs                            :: 18
            Pseudo Genes (total)              :: 311
            CDSs (without protein)            :: 311
            Pseudo Genes (ambiguous residues) :: 0 of 311
            Pseudo Genes (frameshifted)       :: 154 of 311
            Pseudo Genes (incomplete)         :: 170 of 311
            Pseudo Genes (internal stop)      :: 47 of 311
            Pseudo Genes (multiple problems)  :: 53 of 311
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5109669
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E613"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGVX010000001-JBIGVX010000005
WGS_SCAFLD  NZ_JBIGVX010000001-NZ_JBIGVX010000005
//
LOCUS       NZ_JBIGYJ010000000   5397306 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E514, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGYJ000000000
VERSION     NZ_JBIGYJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235508
            Assembly: GCF_045583175.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5397306)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGYJ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGYJ000000000.  This version of the project
            (01) has the accession number NZ_JBIGYJ010000000, and consists of
            sequences JBIGYJ010000001-JBIGYJ010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 206x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045583175.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:20:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,410
            CDSs (total)                      :: 5,297
            Genes (coding)                    :: 4,961
            CDSs (with protein)               :: 4,961
            Genes (RNA)                       :: 113
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 336
            CDSs (without protein)            :: 336
            Pseudo Genes (ambiguous residues) :: 0 of 336
            Pseudo Genes (frameshifted)       :: 180 of 336
            Pseudo Genes (incomplete)         :: 188 of 336
            Pseudo Genes (internal stop)      :: 43 of 336
            Pseudo Genes (multiple problems)  :: 66 of 336
            Pseudo Genes (short protein)      :: 1 of 336
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5397306
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E514"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGYJ010000001-JBIGYJ010000005
WGS_SCAFLD  NZ_JBIGYJ010000001-NZ_JBIGYJ010000005
//
LOCUS       NZ_JWZD01000000      5230726 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CVM N36099PS, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JWZD00000000
VERSION     NZ_JWZD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03177654
            Assembly: GCF_000819305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5230726)
  AUTHORS   Tyson,G.H., McDermott,P.F., Li,C., Chen,Y., Tadesse,D.A.,
            Mukherjee,S., Bodeis-Jones,S., Kabera,C., Gaines,S.A.,
            Loneragan,G.H., Edrington,T.S., Torrence,M., Harhay,D.M. and
            Zhao,S.
  TITLE     WGS accurately predicts antimicrobial resistance in Escherichia
            coli
  JOURNAL   J Antimicrob Chemother 70 (10), 2763-2769 (2015)
   PUBMED   26142410
REFERENCE   2  (bases 1 to 5230726)
  AUTHORS   Tyson,G.H., McDermott,P.F., Li,C., Tadesse,D.A., Mukherjee,S.,
            Bodeis-Jones,S., Kabera,C., Gaines,S.A., Loneragan,G.H.,
            Edrington,T.S., Torrence,M., Harhay,D.M. and Zhao,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-NOV-2014) CVM, FDA, 8401 Muirkirk Rd, Laurel, MD
            20708, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JWZD00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JWZD00000000.  This version of the project
            (01) has the accession number NZ_JWZD01000000, and consists of
            sequences JWZD01000001-JWZD01000267.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: CLC Genomics Workbench v. 7.5
            Assembly Name         :: Escherichia coli CVM N36099PS v1.0
            Genome Coverage       :: 71.2x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000819305.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:49:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,319
            CDSs (total)                      :: 5,224
            Genes (coding)                    :: 4,873
            CDSs (with protein)               :: 4,873
            Genes (RNA)                       :: 95
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 351
            CDSs (without protein)            :: 351
            Pseudo Genes (ambiguous residues) :: 0 of 351
            Pseudo Genes (frameshifted)       :: 100 of 351
            Pseudo Genes (incomplete)         :: 257 of 351
            Pseudo Genes (internal stop)      :: 59 of 351
            Pseudo Genes (multiple problems)  :: 56 of 351
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5230726
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CVM N36099PS"
                     /isolation_source="Farm"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA"
                     /collection_date="2012-01-20"
WGS         JWZD01000001-JWZD01000267
WGS_SCAFLD  NZ_JWZD01000001-NZ_JWZD01000267
//
LOCUS       NZ_JBIHAM010000000   5091646 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E425, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHAM000000000
VERSION     NZ_JBIHAM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235427
            Assembly: GCF_045584735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5091646)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHAM000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHAM000000000.  This version of the project
            (01) has the accession number NZ_JBIHAM010000000, and consists of
            sequences JBIHAM010000001-JBIHAM010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 729x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045584735.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:24:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,020
            CDSs (total)                      :: 4,904
            Genes (coding)                    :: 4,626
            CDSs (with protein)               :: 4,626
            Genes (RNA)                       :: 116
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 278
            CDSs (without protein)            :: 278
            Pseudo Genes (ambiguous residues) :: 0 of 278
            Pseudo Genes (frameshifted)       :: 146 of 278
            Pseudo Genes (incomplete)         :: 151 of 278
            Pseudo Genes (internal stop)      :: 36 of 278
            Pseudo Genes (multiple problems)  :: 51 of 278
            Pseudo Genes (short protein)      :: 1 of 278
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5091646
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E425"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHAM010000001-JBIHAM010000005
WGS_SCAFLD  NZ_JBIHAM010000001-NZ_JBIHAM010000005
//
LOCUS       NZ_JXVW01000000      5271938 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain OLC-684, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JXVW00000000
VERSION     NZ_JXVW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03292337
            Assembly: GCF_000948465.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5271938)
  AUTHORS   Lambert,D., Carrillo,C.D., Koziol,A.G., Manninger,P. and Blais,B.W.
  TITLE     GeneSippr: a rapid whole-genome approach for the identification and
            characterization of foodborne pathogens such as priority Shiga
            toxigenic Escherichia coli
  JOURNAL   PLoS One 10 (4), e0122928 (2015)
   PUBMED   25860693
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5271938)
  AUTHORS   Lambert,D., Carrillo,C.D., Koziol,A.G., Manninger,P. and Blais,B.W.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-JAN-2015) Research and Development, Science Branch,
            Canadian Food Inspection Agency, 960 Carling Ave, Ottawa, Ontario
            K1A 0C6, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JXVW00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JXVW00000000.  This version of the project
            (01) has the accession number NZ_JXVW01000000, and consists of
            sequences JXVW01000001-JXVW01000357.
            Source DNA available from Burton Blais, 960 Carling Ave., Bldg. 22,
            Ottawa, Ontario, Canada, K1A 0C6.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SPAdes v. 3.1.1
            Genome Coverage       :: 4.2x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000948465.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:53:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,434
            CDSs (total)                      :: 5,332
            Genes (coding)                    :: 4,945
            CDSs (with protein)               :: 4,945
            Genes (RNA)                       :: 102
            rRNAs                             :: 9, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 84
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 387
            CDSs (without protein)            :: 387
            Pseudo Genes (ambiguous residues) :: 0 of 387
            Pseudo Genes (frameshifted)       :: 97 of 387
            Pseudo Genes (incomplete)         :: 270 of 387
            Pseudo Genes (internal stop)      :: 69 of 387
            Pseudo Genes (multiple problems)  :: 43 of 387
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5271938
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="OLC-684"
                     /serovar="O145:NM"
                     /db_xref="taxon:562"
                     /geo_loc_name="Canada"
                     /collection_date="2003-11-22"
WGS         JXVW01000001-JXVW01000357
WGS_SCAFLD  NZ_JXVW01000001-NZ_JXVW01000357
//
LOCUS       NZ_JBIHCI010000000   5017920 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E358, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHCI000000000
VERSION     NZ_JBIHCI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235367
            Assembly: GCF_045585735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5017920)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHCI000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHCI000000000.  This version of the project
            (01) has the accession number NZ_JBIHCI010000000, and consists of
            sequences JBIHCI010000001-JBIHCI010000010.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 603x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045585735.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:25:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,901
            CDSs (total)                      :: 4,782
            Genes (coding)                    :: 4,549
            CDSs (with protein)               :: 4,549
            Genes (RNA)                       :: 119
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 233
            CDSs (without protein)            :: 233
            Pseudo Genes (ambiguous residues) :: 0 of 233
            Pseudo Genes (frameshifted)       :: 151 of 233
            Pseudo Genes (incomplete)         :: 104 of 233
            Pseudo Genes (internal stop)      :: 20 of 233
            Pseudo Genes (multiple problems)  :: 37 of 233
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5017920
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E358"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHCI010000001-JBIHCI010000010
WGS_SCAFLD  NZ_JBIHCI010000001-NZ_JBIHCI010000010
//
LOCUS       NZ_JRJF01000000      5258643 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 338, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JRJF00000000
VERSION     NZ_JRJF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03074547
            Assembly: GCF_000947945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5258643)
  AUTHORS   Ferdous,M., Friedrich,A.W., Grundmann,H., de Boer,R.F.,
            Croughs,P.D., Islam,M.A., Kluytmans-van den Bergh,M.F.,
            Kooistra-Smid,A.M. and Rossen,J.W.
  TITLE     Molecular characterization and phylogeny of Shiga toxin-producing
            Escherichia coli isolates obtained from two Dutch regions using
            whole genome sequencing
  JOURNAL   Clin Microbiol Infect 22 (7), 642 (2016)
   PUBMED   27058887
REFERENCE   2  (bases 1 to 5258643)
  AUTHORS   Zhou,K., Ferdous,M., de Boer,R.F., Kooistra-Smid,A.M.,
            Grundmann,H., Friedrich,A.W. and Rossen,J.W.
  TITLE     The mosaic genome structure and phylogeny of Shiga toxin-producing
            Escherichia coli O104:H4 is driven by short-term adaptation
  JOURNAL   Clin Microbiol Infect 21 (5), 468 (2015)
   PUBMED   25656624
REFERENCE   3  (bases 1 to 5258643)
  AUTHORS   Zhou,K. and Rossen,J.W.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-SEP-2014) Medical Microbiology, University Medical
            Center Groningen, Hanzaplein 1, Groningen 9700RB, Netherlands
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JRJF00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JRJF00000000.  This version of the project
            (01) has the accession number NZ_JRJF01000000, and consists of
            sequences JRJF01000001-JRJF01000231.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 7.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 230.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000947945.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:52:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,344
            CDSs (total)                      :: 5,231
            Genes (coding)                    :: 4,935
            CDSs (with protein)               :: 4,935
            Genes (RNA)                       :: 113
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 16S)
            partial rRNAs                     :: 3, 4 (16S, 23S)
            tRNAs                             :: 92
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 296
            CDSs (without protein)            :: 296
            Pseudo Genes (ambiguous residues) :: 0 of 296
            Pseudo Genes (frameshifted)       :: 110 of 296
            Pseudo Genes (incomplete)         :: 192 of 296
            Pseudo Genes (internal stop)      :: 55 of 296
            Pseudo Genes (multiple problems)  :: 53 of 296
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5258643
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="338"
                     /serovar="O104:H4"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Netherlands: Groningen"
                     /lat_lon="53.13 N 6.33 E"
                     /collection_date="2013-07"
                     /collected_by="John Rossen"
WGS         JRJF01000001-JRJF01000231
WGS_SCAFLD  NZ_JRJF01000001-NZ_JRJF01000231
//
LOCUS       NZ_JBIHDX010000000   5253747 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E982, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHDX000000000
VERSION     NZ_JBIHDX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235309
            Assembly: GCF_045607645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5253747)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHDX000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHDX000000000.  This version of the project
            (01) has the accession number NZ_JBIHDX010000000, and consists of
            sequences JBIHDX010000001-JBIHDX010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 274x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045607645.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:32:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,123
            CDSs (total)                      :: 5,005
            Genes (coding)                    :: 4,671
            CDSs (with protein)               :: 4,671
            Genes (RNA)                       :: 118
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 88
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 334
            CDSs (without protein)            :: 334
            Pseudo Genes (ambiguous residues) :: 0 of 334
            Pseudo Genes (frameshifted)       :: 181 of 334
            Pseudo Genes (incomplete)         :: 171 of 334
            Pseudo Genes (internal stop)      :: 60 of 334
            Pseudo Genes (multiple problems)  :: 69 of 334
            Pseudo Genes (short protein)      :: 1 of 334
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5253747
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E982"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHDX010000001-JBIHDX010000008
WGS_SCAFLD  NZ_JBIHDX010000001-NZ_JBIHDX010000008
//
LOCUS       NZ_JBIHGP010000000   5047231 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E870, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHGP000000000
VERSION     NZ_JBIHGP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235214
            Assembly: GCF_045609065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5047231)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHGP000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHGP000000000.  This version of the project
            (01) has the accession number NZ_JBIHGP010000000, and consists of
            sequences JBIHGP010000001-JBIHGP010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 58x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045609065.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:32:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,929
            CDSs (total)                      :: 4,827
            Genes (coding)                    :: 4,517
            CDSs (with protein)               :: 4,517
            Genes (RNA)                       :: 102
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 310
            CDSs (without protein)            :: 310
            Pseudo Genes (ambiguous residues) :: 0 of 310
            Pseudo Genes (frameshifted)       :: 182 of 310
            Pseudo Genes (incomplete)         :: 162 of 310
            Pseudo Genes (internal stop)      :: 39 of 310
            Pseudo Genes (multiple problems)  :: 66 of 310
            Pseudo Genes (short protein)      :: 1 of 310
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5047231
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E870"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHGP010000001-JBIHGP010000007
WGS_SCAFLD  NZ_JBIHGP010000001-NZ_JBIHGP010000007
//
LOCUS       NZ_JBIHIS010000000   5380280 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E787, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHIS000000000
VERSION     NZ_JBIHIS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235142
            Assembly: GCF_045610125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5380280)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHIS000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHIS000000000.  This version of the project
            (01) has the accession number NZ_JBIHIS010000000, and consists of
            sequences JBIHIS010000001-JBIHIS010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 276x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045610125.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:39:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,385
            CDSs (total)                      :: 5,272
            Genes (coding)                    :: 4,913
            CDSs (with protein)               :: 4,913
            Genes (RNA)                       :: 113
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 359
            CDSs (without protein)            :: 359
            Pseudo Genes (ambiguous residues) :: 0 of 359
            Pseudo Genes (frameshifted)       :: 197 of 359
            Pseudo Genes (incomplete)         :: 195 of 359
            Pseudo Genes (internal stop)      :: 48 of 359
            Pseudo Genes (multiple problems)  :: 71 of 359
            Pseudo Genes (short protein)      :: 1 of 359
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5380280
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E787"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHIS010000001-JBIHIS010000004
WGS_SCAFLD  NZ_JBIHIS010000001-NZ_JBIHIS010000004
//
LOCUS       NZ_JBIHKN010000000   5380697 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E706, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHKN000000000
VERSION     NZ_JBIHKN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235077
            Assembly: GCF_045611105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5380697)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHKN000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHKN000000000.  This version of the project
            (01) has the accession number NZ_JBIHKN010000000, and consists of
            sequences JBIHKN010000001-JBIHKN010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 510x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045611105.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:42:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,409
            CDSs (total)                      :: 5,296
            Genes (coding)                    :: 4,933
            CDSs (with protein)               :: 4,933
            Genes (RNA)                       :: 113
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 363
            CDSs (without protein)            :: 363
            Pseudo Genes (ambiguous residues) :: 0 of 363
            Pseudo Genes (frameshifted)       :: 203 of 363
            Pseudo Genes (incomplete)         :: 191 of 363
            Pseudo Genes (internal stop)      :: 41 of 363
            Pseudo Genes (multiple problems)  :: 62 of 363
            Pseudo Genes (short protein)      :: 1 of 363
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5380697
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E706"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHKN010000001-JBIHKN010000006
WGS_SCAFLD  NZ_JBIHKN010000001-NZ_JBIHKN010000006
//
LOCUS       NZ_JBJLOI010000000   5074722 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 558335, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLOI000000000
VERSION     NZ_JBJLOI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061614
            Assembly: GCF_045569295.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5074722)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5074722)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLOI000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLOI000000000.  This version of the project
            (01) has the accession number NZ_JBJLOI010000000, and consists of
            sequences JBJLOI010000001-JBJLOI010000132.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.19
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045569295.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:37:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,979
            CDSs (total)                      :: 4,894
            Genes (coding)                    :: 4,671
            CDSs (with protein)               :: 4,671
            Genes (RNA)                       :: 85
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 75
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 223
            CDSs (without protein)            :: 223
            Pseudo Genes (ambiguous residues) :: 0 of 223
            Pseudo Genes (frameshifted)       :: 89 of 223
            Pseudo Genes (incomplete)         :: 165 of 223
            Pseudo Genes (internal stop)      :: 37 of 223
            Pseudo Genes (multiple problems)  :: 58 of 223
            Pseudo Genes (short protein)      :: 1 of 223
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5074722
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="558335"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2022-01-18"
                     /collected_by="HUMS"
WGS         JBJLOI010000001-JBJLOI010000132
WGS_SCAFLD  NZ_JBJLOI010000001-NZ_JBJLOI010000132
//
LOCUS       NZ_JBIXAC010000000   5401853 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1201, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXAC000000000
VERSION     NZ_JBIXAC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247351
            Assembly: GCF_045619025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5401853)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXAC000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXAC000000000.  This version of the project
            (01) has the accession number NZ_JBIXAC010000000, and consists of
            sequences JBIXAC010000001-JBIXAC010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 318x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045619025.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:42:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,348
            CDSs (total)                      :: 5,225
            Genes (coding)                    :: 4,882
            CDSs (with protein)               :: 4,882
            Genes (RNA)                       :: 123
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 343
            CDSs (without protein)            :: 343
            Pseudo Genes (ambiguous residues) :: 0 of 343
            Pseudo Genes (frameshifted)       :: 179 of 343
            Pseudo Genes (incomplete)         :: 187 of 343
            Pseudo Genes (internal stop)      :: 37 of 343
            Pseudo Genes (multiple problems)  :: 54 of 343
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5401853
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1201"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXAC010000001-JBIXAC010000004
WGS_SCAFLD  NZ_JBIXAC010000001-NZ_JBIXAC010000004
//
LOCUS       NZ_JBIGLX010000000   5144118 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E343, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGLX000000000
VERSION     NZ_JBIGLX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130668
            Assembly: GCF_045571735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5144118)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGLX000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGLX000000000.  This version of the project
            (01) has the accession number NZ_JBIGLX010000000, and consists of
            sequences JBIGLX010000001-JBIGLX010000019.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 280x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045571735.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:34:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,144
            CDSs (total)                      :: 5,025
            Genes (coding)                    :: 4,652
            CDSs (with protein)               :: 4,652
            Genes (RNA)                       :: 119
            rRNAs                             :: 7, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 373
            CDSs (without protein)            :: 373
            Pseudo Genes (ambiguous residues) :: 0 of 373
            Pseudo Genes (frameshifted)       :: 171 of 373
            Pseudo Genes (incomplete)         :: 207 of 373
            Pseudo Genes (internal stop)      :: 45 of 373
            Pseudo Genes (multiple problems)  :: 46 of 373
            Pseudo Genes (short protein)      :: 1 of 373
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5144118
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E343"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGLX010000001-JBIGLX010000019
WGS_SCAFLD  NZ_JBIGLX010000001-NZ_JBIGLX010000019
//
LOCUS       NZ_JBIGNO010000000   5105713 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E287, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGNO000000000
VERSION     NZ_JBIGNO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130618
            Assembly: GCF_045572575.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5105713)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGNO000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGNO000000000.  This version of the project
            (01) has the accession number NZ_JBIGNO010000000, and consists of
            sequences JBIGNO010000001-JBIGNO010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 709x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045572575.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:38:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,055
            CDSs (total)                      :: 4,934
            Genes (coding)                    :: 4,575
            CDSs (with protein)               :: 4,575
            Genes (RNA)                       :: 121
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 359
            CDSs (without protein)            :: 359
            Pseudo Genes (ambiguous residues) :: 0 of 359
            Pseudo Genes (frameshifted)       :: 200 of 359
            Pseudo Genes (incomplete)         :: 169 of 359
            Pseudo Genes (internal stop)      :: 42 of 359
            Pseudo Genes (multiple problems)  :: 49 of 359
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5105713
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E287"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGNO010000001-JBIGNO010000009
WGS_SCAFLD  NZ_JBIGNO010000001-NZ_JBIGNO010000009
//
LOCUS       NZ_JBIGNG010000000   5028764 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E297, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGNG000000000
VERSION     NZ_JBIGNG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130627
            Assembly: GCF_045572435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5028764)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGNG000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGNG000000000.  This version of the project
            (01) has the accession number NZ_JBIGNG010000000, and consists of
            sequences JBIGNG010000001-JBIGNG010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 115x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045572435.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:22:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,946
            CDSs (total)                      :: 4,832
            Genes (coding)                    :: 4,569
            CDSs (with protein)               :: 4,569
            Genes (RNA)                       :: 114
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 263
            CDSs (without protein)            :: 263
            Pseudo Genes (ambiguous residues) :: 0 of 263
            Pseudo Genes (frameshifted)       :: 152 of 263
            Pseudo Genes (incomplete)         :: 110 of 263
            Pseudo Genes (internal stop)      :: 44 of 263
            Pseudo Genes (multiple problems)  :: 38 of 263
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5028764
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E297"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGNG010000001-JBIGNG010000006
WGS_SCAFLD  NZ_JBIGNG010000001-NZ_JBIGNG010000006
//
LOCUS       NZ_JBIGOM010000000   4968410 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E251, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGOM000000000
VERSION     NZ_JBIGOM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130586
            Assembly: GCF_045573125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4968410)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGOM000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGOM000000000.  This version of the project
            (01) has the accession number NZ_JBIGOM010000000, and consists of
            sequences JBIGOM010000001-JBIGOM010000012.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 146x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045573125.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:48:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,841
            CDSs (total)                      :: 4,727
            Genes (coding)                    :: 4,478
            CDSs (with protein)               :: 4,478
            Genes (RNA)                       :: 114
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 249
            CDSs (without protein)            :: 249
            Pseudo Genes (ambiguous residues) :: 0 of 249
            Pseudo Genes (frameshifted)       :: 188 of 249
            Pseudo Genes (incomplete)         :: 72 of 249
            Pseudo Genes (internal stop)      :: 13 of 249
            Pseudo Genes (multiple problems)  :: 24 of 249
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4968410
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E251"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGOM010000001-JBIGOM010000012
WGS_SCAFLD  NZ_JBIGOM010000001-NZ_JBIGOM010000012
//
LOCUS       NZ_JBIGQO010000000   4886751 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E150, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGQO000000000
VERSION     NZ_JBIGQO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130499
            Assembly: GCF_045574165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4886751)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGQO000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGQO000000000.  This version of the project
            (01) has the accession number NZ_JBIGQO010000000, and consists of
            sequences JBIGQO010000001-JBIGQO010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 217x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045574165.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:49:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,783
            CDSs (total)                      :: 4,661
            Genes (coding)                    :: 4,365
            CDSs (with protein)               :: 4,365
            Genes (RNA)                       :: 122
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 296
            CDSs (without protein)            :: 296
            Pseudo Genes (ambiguous residues) :: 0 of 296
            Pseudo Genes (frameshifted)       :: 149 of 296
            Pseudo Genes (incomplete)         :: 130 of 296
            Pseudo Genes (internal stop)      :: 46 of 296
            Pseudo Genes (multiple problems)  :: 26 of 296
            Pseudo Genes (short protein)      :: 1 of 296
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4886751
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E150"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGQO010000001-JBIGQO010000008
WGS_SCAFLD  NZ_JBIGQO010000001-NZ_JBIGQO010000008
//
LOCUS       NZ_JZBJ01000000      5361876 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain UMDUCS45, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JZBJ00000000
VERSION     NZ_JZBJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03372430
            Assembly: GCF_002175715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5361876)
  AUTHORS   Cao,G.
  TITLE     Evolution of E coli from USA
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5361876)
  AUTHORS   Cao,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-MAR-2015) Nutrition and Food Science, University of
            Maryland, 0112 Skinner Building UMD, College Park, MD 20742, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JZBJ00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JZBJ00000000.  This version of the project
            (01) has the accession number NZ_JZBJ01000000, and consists of
            sequences JZBJ01000001-JZBJ01000261.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC genomics workbench v. 7.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 86.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002175715.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:18:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,547
            CDSs (total)                      :: 5,444
            Genes (coding)                    :: 5,087
            CDSs (with protein)               :: 5,087
            Genes (RNA)                       :: 103
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 91
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 357
            CDSs (without protein)            :: 357
            Pseudo Genes (ambiguous residues) :: 0 of 357
            Pseudo Genes (frameshifted)       :: 116 of 357
            Pseudo Genes (incomplete)         :: 219 of 357
            Pseudo Genes (internal stop)      :: 75 of 357
            Pseudo Genes (multiple problems)  :: 44 of 357
            Pseudo Genes (short protein)      :: 1 of 357
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5361876
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="UMDUCS45"
                     /host="cow"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA: California"
                     /lat_lon="37.0000 N 120.0000 W"
                     /collection_date="2012-12-06"
                     /collected_by="Rob Atwill"
WGS         JZBJ01000001-JZBJ01000261
WGS_SCAFLD  NZ_JZBJ01000001-NZ_JZBJ01000261
//
LOCUS       NZ_JBIGVY010000000   5561721 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E611, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGVY000000000
VERSION     NZ_JBIGVY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235591
            Assembly: GCF_045581885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5561721)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGVY000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGVY000000000.  This version of the project
            (01) has the accession number NZ_JBIGVY010000000, and consists of
            sequences JBIGVY010000001-JBIGVY010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 310x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045581885.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:18:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,620
            CDSs (total)                      :: 5,500
            Genes (coding)                    :: 5,064
            CDSs (with protein)               :: 5,064
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 88
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 436
            CDSs (without protein)            :: 436
            Pseudo Genes (ambiguous residues) :: 0 of 436
            Pseudo Genes (frameshifted)       :: 194 of 436
            Pseudo Genes (incomplete)         :: 247 of 436
            Pseudo Genes (internal stop)      :: 51 of 436
            Pseudo Genes (multiple problems)  :: 52 of 436
            Pseudo Genes (short protein)      :: 1 of 436
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5561721
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E611"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGVY010000001-JBIGVY010000008
WGS_SCAFLD  NZ_JBIGVY010000001-NZ_JBIGVY010000008
//
LOCUS       NZ_JBIGYL010000000   5017637 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E512, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGYL000000000
VERSION     NZ_JBIGYL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235506
            Assembly: GCF_045583205.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5017637)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGYL000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGYL000000000.  This version of the project
            (01) has the accession number NZ_JBIGYL010000000, and consists of
            sequences JBIGYL010000001-JBIGYL010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 242x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045583205.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:21:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,869
            CDSs (total)                      :: 4,753
            Genes (coding)                    :: 4,531
            CDSs (with protein)               :: 4,531
            Genes (RNA)                       :: 116
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 222
            CDSs (without protein)            :: 222
            Pseudo Genes (ambiguous residues) :: 0 of 222
            Pseudo Genes (frameshifted)       :: 117 of 222
            Pseudo Genes (incomplete)         :: 115 of 222
            Pseudo Genes (internal stop)      :: 38 of 222
            Pseudo Genes (multiple problems)  :: 45 of 222
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5017637
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E512"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGYL010000001-JBIGYL010000005
WGS_SCAFLD  NZ_JBIGYL010000001-NZ_JBIGYL010000005
//
LOCUS       NZ_JBJKEZ010000000   5366934 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 2461, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKEZ000000000
VERSION     NZ_JBJKEZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44456538
            Assembly: GCF_045505395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5366934)
  AUTHORS   Jamal,H., Al-Fraihat,E., Eshaghi,A., Patel,S.N., Siddiqi,F.,
            Richard-Greenblatt,M., Campigotto,A. and Tadros,M.
  TITLE     Diagnostic Challenges in Detecting the OXA-244 Enzyme
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5366934)
  AUTHORS   Jamal,H., Al-Fraihat,E., Eshaghi,A., Patel,S.N., Siddiqi,F.,
            Richard-Greenblatt,M., Campigotto,A. and Tadros,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2024) Molecular research, Public Health Ontario
            lab, 661 University Avenue, Toronto, Ontario M5G 1M1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKEZ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJKEZ000000000.  This version of the project
            (01) has the accession number NZ_JBJKEZ010000000, and consists of
            sequences JBJKEZ010000001-JBJKEZ010000227.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 08-AUG-2024
            Assembly Method        :: CLC Genomic Worbench v. 8.5.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 400.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045505395.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:45:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,426
            CDSs (total)                      :: 5,339
            Genes (coding)                    :: 5,060
            CDSs (with protein)               :: 5,060
            Genes (RNA)                       :: 87
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 73
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 279
            CDSs (without protein)            :: 279
            Pseudo Genes (ambiguous residues) :: 0 of 279
            Pseudo Genes (frameshifted)       :: 75 of 279
            Pseudo Genes (incomplete)         :: 222 of 279
            Pseudo Genes (internal stop)      :: 41 of 279
            Pseudo Genes (multiple problems)  :: 49 of 279
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5366934
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="2461"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Canada: Ontario"
                     /lat_lon="51.2538 N 85.3232 W"
                     /collection_date="2023-12-22"
WGS         JBJKEZ010000001-JBJKEZ010000227
WGS_SCAFLD  NZ_JBJKEZ010000001-NZ_JBJKEZ010000227
//
LOCUS       NZ_JBIHBH010000000   5138059 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E395, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHBH000000000
VERSION     NZ_JBIHBH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235400
            Assembly: GCF_045585195.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5138059)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHBH000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHBH000000000.  This version of the project
            (01) has the accession number NZ_JBIHBH010000000, and consists of
            sequences JBIHBH010000001-JBIHBH010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 308x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045585195.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:21:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,055
            CDSs (total)                      :: 4,933
            Genes (coding)                    :: 4,714
            CDSs (with protein)               :: 4,714
            Genes (RNA)                       :: 122
            rRNAs                             :: 8, 8, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 219
            CDSs (without protein)            :: 219
            Pseudo Genes (ambiguous residues) :: 0 of 219
            Pseudo Genes (frameshifted)       :: 116 of 219
            Pseudo Genes (incomplete)         :: 111 of 219
            Pseudo Genes (internal stop)      :: 23 of 219
            Pseudo Genes (multiple problems)  :: 28 of 219
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5138059
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E395"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHBH010000001-JBIHBH010000009
WGS_SCAFLD  NZ_JBIHBH010000001-NZ_JBIHBH010000009
//
LOCUS       NZ_JBIGNZ010000000   5111884 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E269, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGNZ000000000
VERSION     NZ_JBIGNZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130602
            Assembly: GCF_045572815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5111884)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGNZ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGNZ000000000.  This version of the project
            (01) has the accession number NZ_JBIGNZ010000000, and consists of
            sequences JBIGNZ010000001-JBIGNZ010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 430x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045572815.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:38:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,995
            CDSs (total)                      :: 4,875
            Genes (coding)                    :: 4,558
            CDSs (with protein)               :: 4,558
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 317
            CDSs (without protein)            :: 317
            Pseudo Genes (ambiguous residues) :: 0 of 317
            Pseudo Genes (frameshifted)       :: 156 of 317
            Pseudo Genes (incomplete)         :: 161 of 317
            Pseudo Genes (internal stop)      :: 52 of 317
            Pseudo Genes (multiple problems)  :: 47 of 317
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5111884
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E269"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGNZ010000001-JBIGNZ010000006
WGS_SCAFLD  NZ_JBIGNZ010000001-NZ_JBIGNZ010000006
//
LOCUS       NZ_JBIGWW010000000   5109653 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E573, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGWW000000000
VERSION     NZ_JBIGWW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235557
            Assembly: GCF_045582365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5109653)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGWW000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGWW000000000.  This version of the project
            (01) has the accession number NZ_JBIGWW010000000, and consists of
            sequences JBIGWW010000001-JBIGWW010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 321x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045582365.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:13:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,028
            CDSs (total)                      :: 4,907
            Genes (coding)                    :: 4,655
            CDSs (with protein)               :: 4,655
            Genes (RNA)                       :: 121
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 252
            CDSs (without protein)            :: 252
            Pseudo Genes (ambiguous residues) :: 0 of 252
            Pseudo Genes (frameshifted)       :: 112 of 252
            Pseudo Genes (incomplete)         :: 132 of 252
            Pseudo Genes (internal stop)      :: 48 of 252
            Pseudo Genes (multiple problems)  :: 34 of 252
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5109653
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E573"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGWW010000001-JBIGWW010000005
WGS_SCAFLD  NZ_JBIGWW010000001-NZ_JBIGWW010000005
//
LOCUS       NZ_JBJLOD010000000   5202680 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 775254, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLOD000000000
VERSION     NZ_JBJLOD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061619
            Assembly: GCF_045569435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5202680)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5202680)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLOD000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLOD000000000.  This version of the project
            (01) has the accession number NZ_JBJLOD010000000, and consists of
            sequences JBJLOD010000001-JBJLOD010000166.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.24
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045569435.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:49:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,156
            CDSs (total)                      :: 5,071
            Genes (coding)                    :: 4,864
            CDSs (with protein)               :: 4,864
            Genes (RNA)                       :: 85
            rRNAs                             :: 1, 1, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 4 (16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 207
            CDSs (without protein)            :: 207
            Pseudo Genes (ambiguous residues) :: 0 of 207
            Pseudo Genes (frameshifted)       :: 74 of 207
            Pseudo Genes (incomplete)         :: 154 of 207
            Pseudo Genes (internal stop)      :: 37 of 207
            Pseudo Genes (multiple problems)  :: 47 of 207
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5202680
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="775254"
                     /isolation_source="RECTAL SWAB"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2022-09-27"
                     /collected_by="HUMS"
WGS         JBJLOD010000001-JBJLOD010000166
WGS_SCAFLD  NZ_JBJLOD010000001-NZ_JBJLOD010000166
//
LOCUS       NZ_JBJLOK010000000   4674608 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 1089386, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLOK000000000
VERSION     NZ_JBJLOK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061612
            Assembly: GCF_045569545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4674608)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4674608)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLOK000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLOK000000000.  This version of the project
            (01) has the accession number NZ_JBJLOK010000000, and consists of
            sequences JBJLOK010000001-JBJLOK010000234.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.17
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045569545.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:39:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,676
            CDSs (total)                      :: 4,624
            Genes (coding)                    :: 4,398
            CDSs (with protein)               :: 4,398
            Genes (RNA)                       :: 52
            rRNAs                             :: 2, 2 (16S, 23S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 226
            CDSs (without protein)            :: 226
            Pseudo Genes (ambiguous residues) :: 0 of 226
            Pseudo Genes (frameshifted)       :: 83 of 226
            Pseudo Genes (incomplete)         :: 134 of 226
            Pseudo Genes (internal stop)      :: 42 of 226
            Pseudo Genes (multiple problems)  :: 30 of 226
            Pseudo Genes (short protein)      :: 1 of 226
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4674608
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="1089386"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-12-21"
                     /collected_by="HUMS"
WGS         JBJLOK010000001-JBJLOK010000234
WGS_SCAFLD  NZ_JBJLOK010000001-NZ_JBJLOK010000234
//
LOCUS       NZ_JBIGLZ010000000   4999912 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E341, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGLZ000000000
VERSION     NZ_JBIGLZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130666
            Assembly: GCF_045571795.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4999912)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGLZ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGLZ000000000.  This version of the project
            (01) has the accession number NZ_JBIGLZ010000000, and consists of
            sequences JBIGLZ010000001-JBIGLZ010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 202x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045571795.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:24:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,897
            CDSs (total)                      :: 4,782
            Genes (coding)                    :: 4,549
            CDSs (with protein)               :: 4,549
            Genes (RNA)                       :: 115
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 233
            CDSs (without protein)            :: 233
            Pseudo Genes (ambiguous residues) :: 0 of 233
            Pseudo Genes (frameshifted)       :: 130 of 233
            Pseudo Genes (incomplete)         :: 103 of 233
            Pseudo Genes (internal stop)      :: 31 of 233
            Pseudo Genes (multiple problems)  :: 29 of 233
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4999912
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E341"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGLZ010000001-JBIGLZ010000008
WGS_SCAFLD  NZ_JBIGLZ010000001-NZ_JBIGLZ010000008
//
LOCUS       NZ_JASWJE010000000   4702903 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain MGH13A, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JASWJE000000000
VERSION     NZ_JASWJE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN35728629
            Assembly: GCF_030707785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4702903)
  AUTHORS   El Chaar,M., Khoury,Y., Douglas,G.M., Kazzi,S., Merhi,G., Jisr,T.,
            Soussi,S., Moghnieh,R.A. and Shapiro,B.J.
  TITLE     Longitudinal genomic surveillance of multidrug-resistant
            Escherichia coli carriage in critical care patients
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4702903)
  AUTHORS   El Chaar,M., Khoury,Y., Douglas,G.M., Kazzi,S., Merhi,G., Jisr,T.,
            Soussi,S., Moghnieh,R.A. and Shapiro,B.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-JUN-2023) Health Sciences, University of Balamand,
            Rond Point Saloumeh, Beirut 55251, Lebanon
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JASWJE000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JASWJE000000000.  This version of the project
            (01) has the accession number NZ_JASWJE010000000, and consists of
            sequences JASWJE010000001-JASWJE010000266.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 112.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_030707785.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:51:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,743
            CDSs (total)                      :: 4,655
            Genes (coding)                    :: 4,403
            CDSs (with protein)               :: 4,403
            Genes (RNA)                       :: 88
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 69
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 252
            CDSs (without protein)            :: 252
            Pseudo Genes (ambiguous residues) :: 0 of 252
            Pseudo Genes (frameshifted)       :: 66 of 252
            Pseudo Genes (incomplete)         :: 183 of 252
            Pseudo Genes (internal stop)      :: 33 of 252
            Pseudo Genes (multiple problems)  :: 27 of 252
            Pseudo Genes (short protein)      :: 1 of 252
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4702903
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="MGH13A"
                     /isolation_source="Perianal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Lebanon"
                     /lat_lon="33.875516 N 35.504428 E"
                     /collection_date="2021-09-11"
                     /collected_by="Makassed General Hospital"
WGS         JASWJE010000001-JASWJE010000266
WGS_SCAFLD  NZ_JASWJE010000001-NZ_JASWJE010000266
//
LOCUS       NZ_LYAX01000000      4559837 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain ECOR13, whole genome shotgun sequencing
            project.
ACCESSION   NZ_LYAX00000000
VERSION     NZ_LYAX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05003858
            Assembly: GCF_002190365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4559837)
  AUTHORS   Fischer,W., Schubert,S. and Messerer,M.
  TITLE     Investigation of Horizontal Gene Transfer of Pathogenicity Islands
            in Escherichia coli using Next-Generation Sequencing
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4559837)
  AUTHORS   Messerer,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Bacteriology, Max von
            Pettenkofer-Institute, Marchioninistrasse, Munich 81377, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LYAX00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_LYAX00000000.  This version of the project
            (01) has the accession number NZ_LYAX01000000, and consists of
            sequences LYAX01000001-LYAX01000389.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: CLC Genomics Workbench v. 6.5
            Genome Coverage       :: 151x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002190365.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:09:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,609
            CDSs (total)                      :: 4,537
            Genes (coding)                    :: 4,284
            CDSs (with protein)               :: 4,284
            Genes (RNA)                       :: 72
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 253
            CDSs (without protein)            :: 253
            Pseudo Genes (ambiguous residues) :: 0 of 253
            Pseudo Genes (frameshifted)       :: 48 of 253
            Pseudo Genes (incomplete)         :: 204 of 253
            Pseudo Genes (internal stop)      :: 24 of 253
            Pseudo Genes (multiple problems)  :: 22 of 253
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4559837
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="ECOR13"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Sweden"
WGS         LYAX01000001-LYAX01000389
WGS_SCAFLD  NZ_LYAX01000001-NZ_LYAX01000389
//
LOCUS       NZ_NLGW01000000      4947010 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain MOD1-EC5717, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NLGW00000000
VERSION     NZ_NLGW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05440442
            Assembly: GCF_002226195.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4947010)
  AUTHORS   Gangiredla,J., Mammel,M.K., Barnaba,T.J., Tartera,C., Gebru,S.T.,
            Patel,I.R., Leonard,S.R., Kotewicz,M.L., Lampel,K.A., Elkins,C.A.
            and Lacher,D.W.
  TITLE     Species-Wide Collection of Escherichia coli Isolates for
            Examination of Genomic Diversity
  JOURNAL   Genome Announc 5 (50), e01321-17 (2017)
   PUBMED   29242221
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4947010)
  AUTHORS   Gangiredla,J., Barnaba,T., Gebru,S., Mammel,M.K., Lacher,D.,
            Tartera,C., Patel,I.R., Leonard,S., Lampel,K.A. and Elkins,C.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-JUL-2017) CFSAN-ORS-DM-MMSB, US Food and Drug
            Administration, 5100 Paint Branch Parkway, College Park, MD 20740,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NLGW00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_NLGW00000000.  This version of the project
            (01) has the accession number NZ_NLGW01000000, and consists of
            sequences NLGW01000001-NLGW01000212.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 27.3x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002226195.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:58:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,973
            CDSs (total)                      :: 4,881
            Genes (coding)                    :: 4,662
            CDSs (with protein)               :: 4,662
            Genes (RNA)                       :: 92
            rRNAs                             :: 7, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 73
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 219
            CDSs (without protein)            :: 219
            Pseudo Genes (ambiguous residues) :: 0 of 219
            Pseudo Genes (frameshifted)       :: 66 of 219
            Pseudo Genes (incomplete)         :: 152 of 219
            Pseudo Genes (internal stop)      :: 35 of 219
            Pseudo Genes (multiple problems)  :: 31 of 219
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4947010
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="MOD1-EC5717"
                     /serotype="O84:H8"
                     /isolation_source="Feces"
                     /host="Bos taurus"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA"
                     /collection_date="1981-03-03"
                     /collected_by="Pennsylvania State University| Escherichia
                     coli Reference Center"
WGS         NLGW01000001-NLGW01000212
WGS_SCAFLD  NZ_NLGW01000001-NZ_NLGW01000212
//
LOCUS       NZ_JBIGMR010000000   5287696 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E318, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGMR000000000
VERSION     NZ_JBIGMR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130646
            Assembly: GCF_045572135.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5287696)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGMR000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGMR000000000.  This version of the project
            (01) has the accession number NZ_JBIGMR010000000, and consists of
            sequences JBIGMR010000001-JBIGMR010000012.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 235x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045572135.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:26:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,205
            CDSs (total)                      :: 5,092
            Genes (coding)                    :: 4,713
            CDSs (with protein)               :: 4,713
            Genes (RNA)                       :: 113
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 379
            CDSs (without protein)            :: 379
            Pseudo Genes (ambiguous residues) :: 0 of 379
            Pseudo Genes (frameshifted)       :: 252 of 379
            Pseudo Genes (incomplete)         :: 137 of 379
            Pseudo Genes (internal stop)      :: 47 of 379
            Pseudo Genes (multiple problems)  :: 52 of 379
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5287696
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E318"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGMR010000001-JBIGMR010000012
WGS_SCAFLD  NZ_JBIGMR010000001-NZ_JBIGMR010000012
//
LOCUS       NZ_JBIGTA010000000   5369518 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E53, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGTA000000000
VERSION     NZ_JBIGTA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130412
            Assembly: GCF_045575495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5369518)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGTA000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGTA000000000.  This version of the project
            (01) has the accession number NZ_JBIGTA010000000, and consists of
            sequences JBIGTA010000001-JBIGTA010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 150x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575495.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,256
            CDSs (total)                      :: 5,143
            Genes (coding)                    :: 4,865
            CDSs (with protein)               :: 4,865
            Genes (RNA)                       :: 113
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 278
            CDSs (without protein)            :: 278
            Pseudo Genes (ambiguous residues) :: 0 of 278
            Pseudo Genes (frameshifted)       :: 129 of 278
            Pseudo Genes (incomplete)         :: 166 of 278
            Pseudo Genes (internal stop)      :: 37 of 278
            Pseudo Genes (multiple problems)  :: 48 of 278
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5369518
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E53"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGTA010000001-JBIGTA010000006
WGS_SCAFLD  NZ_JBIGTA010000001-NZ_JBIGTA010000006
//
LOCUS       NZ_NJTD01000000      5496513 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain MOD1-EC1989, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NJTD00000000
VERSION     NZ_NJTD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05605350
            Assembly: GCF_002458875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5496513)
  AUTHORS   Gangiredla,J., Mammel,M.K., Barnaba,T.J., Tartera,C., Gebru,S.T.,
            Patel,I.R., Leonard,S.R., Kotewicz,M.L., Lampel,K.A., Elkins,C.A.
            and Lacher,D.W.
  TITLE     Species-Wide Collection of Escherichia coli Isolates for
            Examination of Genomic Diversity
  JOURNAL   Genome Announc 5 (50), e01321-17 (2017)
   PUBMED   29242221
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5496513)
  AUTHORS   Gangiredla,J., Barnaba,T., Gebru,S., Mammel,M.K., Lacher,D.,
            Tartera,C., Patel,I.R., Leonard,S., Lampel,K.A. and Elkins,C.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUN-2017) CFSAN-ORS-DM-MMSB, US Food and Drug
            Administration, 5100 Paint Branch Parkway, College Park, MD 20740,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NJTD00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_NJTD00000000.  This version of the project
            (01) has the accession number NZ_NJTD01000000, and consists of
            sequences NJTD01000001-NJTD01000308.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 39.1x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002458875.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:19:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,734
            CDSs (total)                      :: 5,633
            Genes (coding)                    :: 5,321
            CDSs (with protein)               :: 5,321
            Genes (RNA)                       :: 101
            rRNAs                             :: 7, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 7 (5S)
            partial rRNAs                     :: 3, 2 (16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 312
            CDSs (without protein)            :: 312
            Pseudo Genes (ambiguous residues) :: 0 of 312
            Pseudo Genes (frameshifted)       :: 88 of 312
            Pseudo Genes (incomplete)         :: 230 of 312
            Pseudo Genes (internal stop)      :: 36 of 312
            Pseudo Genes (multiple problems)  :: 37 of 312
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5496513
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="MOD1-EC1989"
                     /serotype="O146:H21"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA: CT"
                     /collection_date="2002"
                     /collected_by="Michigan State University"
WGS         NJTD01000001-NJTD01000308
WGS_SCAFLD  NZ_NJTD01000001-NZ_NJTD01000308
//
LOCUS       NZ_JBIGRH010000000   5284926 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E127, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGRH000000000
VERSION     NZ_JBIGRH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130479
            Assembly: GCF_045574545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5284926)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGRH000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGRH000000000.  This version of the project
            (01) has the accession number NZ_JBIGRH010000000, and consists of
            sequences JBIGRH010000001-JBIGRH010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 401x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045574545.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:53:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,185
            CDSs (total)                      :: 5,058
            Genes (coding)                    :: 4,856
            CDSs (with protein)               :: 4,856
            Genes (RNA)                       :: 127
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 95
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 202
            CDSs (without protein)            :: 202
            Pseudo Genes (ambiguous residues) :: 0 of 202
            Pseudo Genes (frameshifted)       :: 110 of 202
            Pseudo Genes (incomplete)         :: 99 of 202
            Pseudo Genes (internal stop)      :: 24 of 202
            Pseudo Genes (multiple problems)  :: 30 of 202
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5284926
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E127"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGRH010000001-JBIGRH010000006
WGS_SCAFLD  NZ_JBIGRH010000001-NZ_JBIGRH010000006
//
LOCUS       NZ_JBIGTP010000000   5183168 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E24, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGTP000000000
VERSION     NZ_JBIGTP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130391
            Assembly: GCF_045575795.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5183168)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGTP000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGTP000000000.  This version of the project
            (01) has the accession number NZ_JBIGTP010000000, and consists of
            sequences JBIGTP010000001-JBIGTP010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 151x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575795.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:54:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,128
            CDSs (total)                      :: 5,005
            Genes (coding)                    :: 4,652
            CDSs (with protein)               :: 4,652
            Genes (RNA)                       :: 123
            rRNAs                             :: 8, 8, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            tRNAs                             :: 90
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 353
            CDSs (without protein)            :: 353
            Pseudo Genes (ambiguous residues) :: 0 of 353
            Pseudo Genes (frameshifted)       :: 152 of 353
            Pseudo Genes (incomplete)         :: 208 of 353
            Pseudo Genes (internal stop)      :: 63 of 353
            Pseudo Genes (multiple problems)  :: 63 of 353
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5183168
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E24"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGTP010000001-JBIGTP010000008
WGS_SCAFLD  NZ_JBIGTP010000001-NZ_JBIGTP010000008
//
LOCUS       NZ_QFSK01000000      5592037 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 05-06154, whole genome shotgun sequencing
            project.
ACCESSION   NZ_QFSK00000000
VERSION     NZ_QFSK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09097265
            Assembly: GCF_003255245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5592037)
  AUTHORS   Karnisova,L., Marejkova,M., Hrbackova,H., Mellmann,A., Karch,H.,
            Fruth,A., Drevinek,P., Blahova,K., Bielaszewska,M. and Nunvar,J.
  TITLE     Attack of the clones: whole genome-based characterization of two
            closely related enterohemorrhagic Escherichia coli O26 epidemic
            lineages
  JOURNAL   BMC Genomics 19 (1), 647 (2018)
   PUBMED   30170539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5592037)
  AUTHORS   Karnisova,L., Nunvar,J., Marejkova,M., Mellmann,A., Drevinek,P.,
            Blahova,K. and Bielaszewska,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAY-2018) Department of Medical Microbiology, 2nd
            Faculty of Medicine, Charles University and Motol University
            Hospital, V Uvalu 54, Prague 150 06, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QFSK00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_QFSK00000000.  This version of the project
            (01) has the accession number NZ_QFSK01000000, and consists of
            sequences QFSK01000001-QFSK01000597.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003255245.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:18:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,133
            CDSs (total)                      :: 6,033
            Genes (coding)                    :: 5,571
            CDSs (with protein)               :: 5,571
            Genes (RNA)                       :: 100
            rRNAs                             :: 3, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2, 3 (5S, 16S)
            tRNAs                             :: 82
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 462
            CDSs (without protein)            :: 462
            Pseudo Genes (ambiguous residues) :: 0 of 462
            Pseudo Genes (frameshifted)       :: 136 of 462
            Pseudo Genes (incomplete)         :: 332 of 462
            Pseudo Genes (internal stop)      :: 65 of 462
            Pseudo Genes (multiple problems)  :: 64 of 462
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5592037
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="05-06154"
                     /serotype="O26"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Germany"
                     /collection_date="2005"
                     /collected_by="Institute for Hygiene, University of
                     Muenster, Muenster, Germany"
WGS         QFSK01000001-QFSK01000597
WGS_SCAFLD  NZ_QFSK01000001-NZ_QFSK01000597
//
LOCUS       NZ_JBIGTR010000000   5202020 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E21, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGTR000000000
VERSION     NZ_JBIGTR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130388
            Assembly: GCF_045575835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5202020)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGTR000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGTR000000000.  This version of the project
            (01) has the accession number NZ_JBIGTR010000000, and consists of
            sequences JBIGTR010000001-JBIGTR010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 657x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575835.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:44:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,188
            CDSs (total)                      :: 5,067
            Genes (coding)                    :: 4,833
            CDSs (with protein)               :: 4,833
            Genes (RNA)                       :: 121
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 90
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 234
            CDSs (without protein)            :: 234
            Pseudo Genes (ambiguous residues) :: 0 of 234
            Pseudo Genes (frameshifted)       :: 125 of 234
            Pseudo Genes (incomplete)         :: 113 of 234
            Pseudo Genes (internal stop)      :: 29 of 234
            Pseudo Genes (multiple problems)  :: 32 of 234
            Pseudo Genes (short protein)      :: 1 of 234
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5202020
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E21"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGTR010000001-JBIGTR010000008
WGS_SCAFLD  NZ_JBIGTR010000001-NZ_JBIGTR010000008
//
LOCUS       NZ_JBIHKJ010000000   5151149 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E717, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHKJ000000000
VERSION     NZ_JBIHKJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235083
            Assembly: GCF_045611025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5151149)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHKJ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHKJ000000000.  This version of the project
            (01) has the accession number NZ_JBIHKJ010000000, and consists of
            sequences JBIHKJ010000001-JBIHKJ010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 271x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045611025.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:39:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,989
            CDSs (total)                      :: 4,875
            Genes (coding)                    :: 4,690
            CDSs (with protein)               :: 4,690
            Genes (RNA)                       :: 114
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 185
            CDSs (without protein)            :: 185
            Pseudo Genes (ambiguous residues) :: 0 of 185
            Pseudo Genes (frameshifted)       :: 109 of 185
            Pseudo Genes (incomplete)         :: 78 of 185
            Pseudo Genes (internal stop)      :: 22 of 185
            Pseudo Genes (multiple problems)  :: 21 of 185
            Pseudo Genes (short protein)      :: 1 of 185
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5151149
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E717"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHKJ010000001-JBIHKJ010000006
WGS_SCAFLD  NZ_JBIHKJ010000001-NZ_JBIHKJ010000006
//
LOCUS       NZ_WJGT01000000      5130509 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain MF3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WJGT00000000
VERSION     NZ_WJGT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13064478
            Assembly: GCF_009648245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5130509)
  AUTHORS   Zhenling Zeng,X.Z.
  TITLE     Pet hospital bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5130509)
  AUTHORS   Zhenling Zeng,X.Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2019) College of Veterinary Medicine, South China
            Agricultural University, Wushan, Tianhe District, Guangzhou,
            Guangdong 510642, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WJGT00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_WJGT00000000.  This version of the project
            (01) has the accession number NZ_WJGT01000000, and consists of
            sequences WJGT01000001-WJGT01000142.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC Genomics Workbench v. 10.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 399x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009648245.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:51:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,106
            CDSs (total)                      :: 5,019
            Genes (coding)                    :: 4,834
            CDSs (with protein)               :: 4,834
            Genes (RNA)                       :: 87
            rRNAs                             :: 5, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 16S)
            partial rRNAs                     :: 1, 1, 2 (5S, 16S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 185
            CDSs (without protein)            :: 185
            Pseudo Genes (ambiguous residues) :: 0 of 185
            Pseudo Genes (frameshifted)       :: 53 of 185
            Pseudo Genes (incomplete)         :: 136 of 185
            Pseudo Genes (internal stop)      :: 29 of 185
            Pseudo Genes (multiple problems)  :: 29 of 185
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5130509
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="MF3"
                     /isolation_source="feces"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="China: Guangdong"
                     /lat_lon="23.16 N 113.23 E"
                     /collection_date="2018-11-20"
                     /collected_by="Yuexiu district pet hospital"
WGS         WJGT01000001-WJGT01000142
WGS_SCAFLD  NZ_WJGT01000001-NZ_WJGT01000142
//
LOCUS       NZ_JBIWZB010000000   5179235 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1232, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIWZB000000000
VERSION     NZ_JBIWZB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247378
            Assembly: GCF_045618405.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5179235)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIWZB000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIWZB000000000.  This version of the project
            (01) has the accession number NZ_JBIWZB010000000, and consists of
            sequences JBIWZB010000001-JBIWZB010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 328x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045618405.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:39:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,116
            CDSs (total)                      :: 4,996
            Genes (coding)                    :: 4,638
            CDSs (with protein)               :: 4,638
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 358
            CDSs (without protein)            :: 358
            Pseudo Genes (ambiguous residues) :: 0 of 358
            Pseudo Genes (frameshifted)       :: 199 of 358
            Pseudo Genes (incomplete)         :: 177 of 358
            Pseudo Genes (internal stop)      :: 51 of 358
            Pseudo Genes (multiple problems)  :: 65 of 358
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5179235
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1232"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIWZB010000001-JBIWZB010000007
WGS_SCAFLD  NZ_JBIWZB010000001-NZ_JBIWZB010000007
//
LOCUS       NZ_JBJLNV010000000   5013746 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 882396, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLNV000000000
VERSION     NZ_JBJLNV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061627
            Assembly: GCF_045570675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5013746)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5013746)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLNV000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLNV000000000.  This version of the project
            (01) has the accession number NZ_JBJLNV010000000, and consists of
            sequences JBJLNV010000001-JBJLNV010000116.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.32
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045570675.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:29:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,983
            CDSs (total)                      :: 4,896
            Genes (coding)                    :: 4,696
            CDSs (with protein)               :: 4,696
            Genes (RNA)                       :: 87
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 200
            CDSs (without protein)            :: 200
            Pseudo Genes (ambiguous residues) :: 0 of 200
            Pseudo Genes (frameshifted)       :: 73 of 200
            Pseudo Genes (incomplete)         :: 147 of 200
            Pseudo Genes (internal stop)      :: 36 of 200
            Pseudo Genes (multiple problems)  :: 48 of 200
            Pseudo Genes (short protein)      :: 1 of 200
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5013746
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="882396"
                     /isolation_source="RECTAL SWAB"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-02-23"
                     /collected_by="HUMS"
WGS         JBJLNV010000001-JBJLNV010000116
WGS_SCAFLD  NZ_JBJLNV010000001-NZ_JBJLNV010000116
//
LOCUS       NZ_JBIXAD010000000   5124771 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1200, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXAD000000000
VERSION     NZ_JBIXAD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247350
            Assembly: GCF_045618965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5124771)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXAD000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXAD000000000.  This version of the project
            (01) has the accession number NZ_JBIXAD010000000, and consists of
            sequences JBIXAD010000001-JBIXAD010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 436x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045618965.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:37:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,098
            CDSs (total)                      :: 4,980
            Genes (coding)                    :: 4,713
            CDSs (with protein)               :: 4,713
            Genes (RNA)                       :: 118
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 133 of 267
            Pseudo Genes (incomplete)         :: 132 of 267
            Pseudo Genes (internal stop)      :: 42 of 267
            Pseudo Genes (multiple problems)  :: 39 of 267
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5124771
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1200"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXAD010000001-JBIXAD010000008
WGS_SCAFLD  NZ_JBIXAD010000001-NZ_JBIXAD010000008
//
LOCUS       NZ_WNKL01000000      4762830 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain PNUSAS115272, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WNKL00000000
VERSION     NZ_WNKL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13244681
            Assembly: GCF_016878975.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4762830)
  AUTHORS   Tran,T.
  TITLE     Plasmids from dairy manure
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4762830)
  AUTHORS   Tran,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-NOV-2019) Biology, Western University, 1151 Richmond
            St, London, ON N6A 3K7, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WNKL00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_WNKL00000000.  This version of the project
            (01) has the accession number NZ_WNKL01000000, and consists of
            sequences WNKL01000001-WNKL01000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: GS De Novo Assembler v. 191108
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Hybrid
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_016878975.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:50:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,686
            CDSs (total)                      :: 4,564
            Genes (coding)                    :: 4,356
            CDSs (with protein)               :: 4,356
            Genes (RNA)                       :: 122
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 15
            Pseudo Genes (total)              :: 208
            CDSs (without protein)            :: 208
            Pseudo Genes (ambiguous residues) :: 0 of 208
            Pseudo Genes (frameshifted)       :: 53 of 208
            Pseudo Genes (incomplete)         :: 150 of 208
            Pseudo Genes (internal stop)      :: 39 of 208
            Pseudo Genes (multiple problems)  :: 31 of 208
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4762830
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="PNUSAS115272"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA"
                     /collection_date="2019-10"
                     /collected_by="CDC"
WGS         WNKL01000001-WNKL01000002
WGS_SCAFLD  NZ_WNKL01000001-NZ_WNKL01000002
//
LOCUS       NZ_JBIGNP010000000   5085398 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E286, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGNP000000000
VERSION     NZ_JBIGNP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130617
            Assembly: GCF_045572595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5085398)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGNP000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGNP000000000.  This version of the project
            (01) has the accession number NZ_JBIGNP010000000, and consists of
            sequences JBIGNP010000001-JBIGNP010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 292x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045572595.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:35:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,003
            CDSs (total)                      :: 4,880
            Genes (coding)                    :: 4,608
            CDSs (with protein)               :: 4,608
            Genes (RNA)                       :: 123
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 272
            CDSs (without protein)            :: 272
            Pseudo Genes (ambiguous residues) :: 0 of 272
            Pseudo Genes (frameshifted)       :: 116 of 272
            Pseudo Genes (incomplete)         :: 163 of 272
            Pseudo Genes (internal stop)      :: 39 of 272
            Pseudo Genes (multiple problems)  :: 43 of 272
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5085398
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E286"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGNP010000001-JBIGNP010000007
WGS_SCAFLD  NZ_JBIGNP010000001-NZ_JBIGNP010000007
//
LOCUS       NZ_JAULAA010000000   5573236 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 8, whole genome shotgun sequencing project.
ACCESSION   NZ_JAULAA000000000
VERSION     NZ_JAULAA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN36411893
            Assembly: GCF_030511815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5573236)
  AUTHORS   Literacka,E.
  TITLE     High risk of intestinal colonization with ESBL-producing
            Escherichia coli among soldiers of military contingents in specific
            geographic regions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5573236)
  AUTHORS   Literacka,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-JUL-2023) Department of Epidemiology and Clinical
            Microbiology, National Medicines Institute, Chelmska 30/34, Warsaw
            00-725, Poland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAULAA000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JAULAA000000000.  This version of the project
            (01) has the accession number NZ_JAULAA010000000, and consists of
            sequences JAULAA010000001-JAULAA010000251.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 42x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_030511815.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:56:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,703
            CDSs (total)                      :: 5,565
            Genes (coding)                    :: 5,282
            CDSs (with protein)               :: 5,282
            Genes (RNA)                       :: 138
            rRNAs                             :: 11, 8, 15 (5S, 16S, 23S)
            complete rRNAs                    :: 5 (5S)
            partial rRNAs                     :: 6, 8, 15 (5S, 16S, 23S)
            tRNAs                             :: 95
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 283
            CDSs (without protein)            :: 283
            Pseudo Genes (ambiguous residues) :: 0 of 283
            Pseudo Genes (frameshifted)       :: 86 of 283
            Pseudo Genes (incomplete)         :: 217 of 283
            Pseudo Genes (internal stop)      :: 40 of 283
            Pseudo Genes (multiple problems)  :: 53 of 283
            Pseudo Genes (short protein)      :: 1 of 283
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5573236
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="8"
                     /isolation_source="rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Afghanistan"
                     /collection_date="2019"
                     /collected_by="National Medicines Institute"
                     /genotype="ST 69"
WGS         JAULAA010000001-JAULAA010000251
WGS_SCAFLD  NZ_JAULAA010000001-NZ_JAULAA010000251
//
LOCUS       NZ_JBIXAS010000000   5236209 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1181, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXAS000000000
VERSION     NZ_JBIXAS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247335
            Assembly: GCF_045619265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5236209)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXAS000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXAS000000000.  This version of the project
            (01) has the accession number NZ_JBIXAS010000000, and consists of
            sequences JBIXAS010000001-JBIXAS010000010.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 622x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045619265.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:32:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,193
            CDSs (total)                      :: 5,082
            Genes (coding)                    :: 4,749
            CDSs (with protein)               :: 4,749
            Genes (RNA)                       :: 111
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 333
            CDSs (without protein)            :: 333
            Pseudo Genes (ambiguous residues) :: 0 of 333
            Pseudo Genes (frameshifted)       :: 180 of 333
            Pseudo Genes (incomplete)         :: 189 of 333
            Pseudo Genes (internal stop)      :: 32 of 333
            Pseudo Genes (multiple problems)  :: 61 of 333
            Pseudo Genes (short protein)      :: 1 of 333
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5236209
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1181"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXAS010000001-JBIXAS010000010
WGS_SCAFLD  NZ_JBIXAS010000001-NZ_JBIXAS010000010
//
LOCUS       NZ_JBIGPN010000000   5344614 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E192, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGPN000000000
VERSION     NZ_JBIGPN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130538
            Assembly: GCF_045573625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5344614)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGPN000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGPN000000000.  This version of the project
            (01) has the accession number NZ_JBIGPN010000000, and consists of
            sequences JBIGPN010000001-JBIGPN010000014.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 222x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045573625.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:28:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,278
            CDSs (total)                      :: 5,157
            Genes (coding)                    :: 4,910
            CDSs (with protein)               :: 4,910
            Genes (RNA)                       :: 121
            rRNAs                             :: 8, 8, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 247
            CDSs (without protein)            :: 247
            Pseudo Genes (ambiguous residues) :: 0 of 247
            Pseudo Genes (frameshifted)       :: 109 of 247
            Pseudo Genes (incomplete)         :: 147 of 247
            Pseudo Genes (internal stop)      :: 23 of 247
            Pseudo Genes (multiple problems)  :: 29 of 247
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5344614
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E192"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGPN010000001-JBIGPN010000014
WGS_SCAFLD  NZ_JBIGPN010000001-NZ_JBIGPN010000014
//
LOCUS       NZ_JAPZHC010000000   4730084 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain EC31, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAPZHC000000000
VERSION     NZ_JAPZHC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32065182
            Assembly: GCF_029088325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4730084)
  AUTHORS   Wen,R. and Wei,H.
  TITLE     The prevalence of carbapenem-resistant bacteria in aquaculture in
            China and the genetic diversity of carbapenem-resistant genes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4730084)
  AUTHORS   Wen,R. and Wei,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-DEC-2022) College of Life Science, Sichuan
            University, Wangjiang Road 29, Chengdu 610064, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAPZHC000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JAPZHC000000000.  This version of the project
            (01) has the accession number NZ_JAPZHC010000000, and consists of
            sequences JAPZHC010000001-JAPZHC010000197.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029088325.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:55:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,746
            CDSs (total)                      :: 4,653
            Genes (coding)                    :: 4,358
            CDSs (with protein)               :: 4,358
            Genes (RNA)                       :: 93
            rRNAs                             :: 2, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 1, 3 (5S, 16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 295
            CDSs (without protein)            :: 295
            Pseudo Genes (ambiguous residues) :: 0 of 295
            Pseudo Genes (frameshifted)       :: 78 of 295
            Pseudo Genes (incomplete)         :: 218 of 295
            Pseudo Genes (internal stop)      :: 43 of 295
            Pseudo Genes (multiple problems)  :: 39 of 295
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4730084
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="EC31"
                     /isolation_source="swine farm"
                     /db_xref="taxon:562"
                     /geo_loc_name="China: Sichuan"
                     /collection_date="2021"
WGS         JAPZHC010000001-JAPZHC010000197
WGS_SCAFLD  NZ_JAPZHC010000001-NZ_JAPZHC010000197
//
LOCUS       NZ_JBJLOP010000000   4989492 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 1006465, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLOP000000000
VERSION     NZ_JBJLOP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061607
            Assembly: GCF_045569495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4989492)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4989492)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLOP000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLOP000000000.  This version of the project
            (01) has the accession number NZ_JBJLOP010000000, and consists of
            sequences JBJLOP010000001-JBJLOP010000136.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.12
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045569495.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:49:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,989
            CDSs (total)                      :: 4,907
            Genes (coding)                    :: 4,698
            CDSs (with protein)               :: 4,698
            Genes (RNA)                       :: 82
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 75
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 209
            CDSs (without protein)            :: 209
            Pseudo Genes (ambiguous residues) :: 0 of 209
            Pseudo Genes (frameshifted)       :: 68 of 209
            Pseudo Genes (incomplete)         :: 160 of 209
            Pseudo Genes (internal stop)      :: 38 of 209
            Pseudo Genes (multiple problems)  :: 48 of 209
            Pseudo Genes (short protein)      :: 1 of 209
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4989492
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="1006465"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-09-03"
                     /collected_by="HUMS"
WGS         JBJLOP010000001-JBJLOP010000136
WGS_SCAFLD  NZ_JBJLOP010000001-NZ_JBJLOP010000136
//
LOCUS       NZ_JBIXCN010000000   5170126 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1127, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXCN000000000
VERSION     NZ_JBIXCN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247288
            Assembly: GCF_045620225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5170126)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXCN000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXCN000000000.  This version of the project
            (01) has the accession number NZ_JBIXCN010000000, and consists of
            sequences JBIXCN010000001-JBIXCN010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 234x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045620225.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:48:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,117
            CDSs (total)                      :: 4,999
            Genes (coding)                    :: 4,753
            CDSs (with protein)               :: 4,753
            Genes (RNA)                       :: 118
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 90
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 246
            CDSs (without protein)            :: 246
            Pseudo Genes (ambiguous residues) :: 0 of 246
            Pseudo Genes (frameshifted)       :: 113 of 246
            Pseudo Genes (incomplete)         :: 150 of 246
            Pseudo Genes (internal stop)      :: 34 of 246
            Pseudo Genes (multiple problems)  :: 47 of 246
            Pseudo Genes (short protein)      :: 1 of 246
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5170126
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1127"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXCN010000001-JBIXCN010000006
WGS_SCAFLD  NZ_JBIXCN010000001-NZ_JBIXCN010000006
//
LOCUS       NZ_JBHFVY010000000   4937569 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain LQC2012, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBHFVY000000000
VERSION     NZ_JBHFVY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43454176
            Assembly: GCF_041947605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4937569)
  AUTHORS   Vanderyacht,T., Salinas,L., Mitchell,T., Walas,N., Ho,T., Trueba,G.
            and Graham,J.
  TITLE     Assessing the Role of Domestic Wastewater Treatment in the Spread
            of ESBL-Producing Escherichia Coli through Irrigation Waters
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4937569)
  AUTHORS   Ho,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2024) Environmental Health Science, University of
            California Berkeley, 2121 Berkeley Way West, Berkeley, CA
            94720-7360, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBHFVY000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBHFVY000000000.  This version of the project
            (01) has the accession number NZ_JBHFVY010000000, and consists of
            sequences JBHFVY010000001-JBHFVY010000098.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2023
            Assembly Method        :: SPAdes v. 3.6.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_041947605.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:57:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,876
            CDSs (total)                      :: 4,790
            Genes (coding)                    :: 4,577
            CDSs (with protein)               :: 4,577
            Genes (RNA)                       :: 86
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 213
            CDSs (without protein)            :: 213
            Pseudo Genes (ambiguous residues) :: 0 of 213
            Pseudo Genes (frameshifted)       :: 74 of 213
            Pseudo Genes (incomplete)         :: 138 of 213
            Pseudo Genes (internal stop)      :: 36 of 213
            Pseudo Genes (multiple problems)  :: 34 of 213
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4937569
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="LQC2012"
                     /isolation_source="Downstream pintag irrigation water"
                     /db_xref="taxon:562"
                     /geo_loc_name="Ecuador: Pichincha"
                     /lat_lon="0.3669 S 78.40 W"
                     /collection_date="2023-06/2023-07"
                     /collected_by="University of California, Berkeley"
WGS         JBHFVY010000001-JBHFVY010000098
WGS_SCAFLD  NZ_JBHFVY010000001-NZ_JBHFVY010000098
//
LOCUS       NZ_JBJLNZ010000000   4701815 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 882410, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLNZ000000000
VERSION     NZ_JBJLNZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061623
            Assembly: GCF_045570695.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4701815)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4701815)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLNZ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLNZ000000000.  This version of the project
            (01) has the accession number NZ_JBJLNZ010000000, and consists of
            sequences JBJLNZ010000001-JBJLNZ010000193.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.28
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045570695.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:25:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,701
            CDSs (total)                      :: 4,620
            Genes (coding)                    :: 4,345
            CDSs (with protein)               :: 4,345
            Genes (RNA)                       :: 81
            rRNAs                             :: 1, 2 (16S, 23S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 275
            CDSs (without protein)            :: 275
            Pseudo Genes (ambiguous residues) :: 0 of 275
            Pseudo Genes (frameshifted)       :: 80 of 275
            Pseudo Genes (incomplete)         :: 193 of 275
            Pseudo Genes (internal stop)      :: 44 of 275
            Pseudo Genes (multiple problems)  :: 36 of 275
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4701815
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="882410"
                     /isolation_source="RECTAL SWAB"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-02-23"
                     /collected_by="HUMS"
WGS         JBJLNZ010000001-JBJLNZ010000193
WGS_SCAFLD  NZ_JBJLNZ010000001-NZ_JBJLNZ010000193
//
LOCUS       NZ_JBIGRY010000000   5419033 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E93, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGRY000000000
VERSION     NZ_JBIGRY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130448
            Assembly: GCF_045574885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5419033)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGRY000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGRY000000000.  This version of the project
            (01) has the accession number NZ_JBIGRY010000000, and consists of
            sequences JBIGRY010000001-JBIGRY010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 180x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045574885.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:45:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,363
            CDSs (total)                      :: 5,251
            Genes (coding)                    :: 4,933
            CDSs (with protein)               :: 4,933
            Genes (RNA)                       :: 112
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 318
            CDSs (without protein)            :: 318
            Pseudo Genes (ambiguous residues) :: 0 of 318
            Pseudo Genes (frameshifted)       :: 163 of 318
            Pseudo Genes (incomplete)         :: 182 of 318
            Pseudo Genes (internal stop)      :: 31 of 318
            Pseudo Genes (multiple problems)  :: 52 of 318
            Pseudo Genes (short protein)      :: 1 of 318
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5419033
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E93"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGRY010000001-JBIGRY010000005
WGS_SCAFLD  NZ_JBIGRY010000001-NZ_JBIGRY010000005
//
LOCUS       NZ_JBIGNX010000000   5470142 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E274, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGNX000000000
VERSION     NZ_JBIGNX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130607
            Assembly: GCF_045572775.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5470142)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGNX000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGNX000000000.  This version of the project
            (01) has the accession number NZ_JBIGNX010000000, and consists of
            sequences JBIGNX010000001-JBIGNX010000011.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 303x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045572775.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:39:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,454
            CDSs (total)                      :: 5,329
            Genes (coding)                    :: 4,991
            CDSs (with protein)               :: 4,991
            Genes (RNA)                       :: 125
            rRNAs                             :: 8, 8, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            tRNAs                             :: 92
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 185 of 338
            Pseudo Genes (incomplete)         :: 170 of 338
            Pseudo Genes (internal stop)      :: 45 of 338
            Pseudo Genes (multiple problems)  :: 54 of 338
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5470142
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E274"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGNX010000001-JBIGNX010000011
WGS_SCAFLD  NZ_JBIGNX010000001-NZ_JBIGNX010000011
//
LOCUS       NZ_NMDT01000000      4981449 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain MOD1-EC6054, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NMDT00000000
VERSION     NZ_NMDT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05439501
            Assembly: GCF_002537735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4981449)
  AUTHORS   Gangiredla,J., Mammel,M.K., Barnaba,T.J., Tartera,C., Gebru,S.T.,
            Patel,I.R., Leonard,S.R., Kotewicz,M.L., Lampel,K.A., Elkins,C.A.
            and Lacher,D.W.
  TITLE     Species-Wide Collection of Escherichia coli Isolates for
            Examination of Genomic Diversity
  JOURNAL   Genome Announc 5 (50), e01321-17 (2017)
   PUBMED   29242221
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4981449)
  AUTHORS   Gangiredla,J., Lacher,D.W., Mammel,M.K., Barnaba,T., Tartera,C.,
            Gebru,S., Patel,I.R., Leonard,S.R., Lampel,K.A. and Elkins,C.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2017) CFSAN-ORS-DM-MMSB, US Food and Drug
            Administration, 5100 Paint Branch Parkway, College Park, MD 20740,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NMDT00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_NMDT00000000.  This version of the project
            (01) has the accession number NZ_NMDT01000000, and consists of
            sequences NMDT01000001-NMDT01000070.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 53.6x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002537735.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:15:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,888
            CDSs (total)                      :: 4,795
            Genes (coding)                    :: 4,632
            CDSs (with protein)               :: 4,632
            Genes (RNA)                       :: 93
            rRNAs                             :: 6, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5 (5S)
            tRNAs                             :: 79
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 163
            CDSs (without protein)            :: 163
            Pseudo Genes (ambiguous residues) :: 0 of 163
            Pseudo Genes (frameshifted)       :: 57 of 163
            Pseudo Genes (incomplete)         :: 113 of 163
            Pseudo Genes (internal stop)      :: 29 of 163
            Pseudo Genes (multiple problems)  :: 32 of 163
            Pseudo Genes (short protein)      :: 1 of 163
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4981449
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="MOD1-EC6054"
                     /serotype="O117:H5"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA"
                     /collection_date="2010-06-30"
                     /collected_by="Pennsylvania State University| Escherichia
                     coli Reference Center"
WGS         NMDT01000001-NMDT01000070
WGS_SCAFLD  NZ_NMDT01000001-NZ_NMDT01000070
//
LOCUS       NZ_JBIGOQ010000000   5136653 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E245, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGOQ000000000
VERSION     NZ_JBIGOQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130580
            Assembly: GCF_045573225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5136653)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGOQ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGOQ000000000.  This version of the project
            (01) has the accession number NZ_JBIGOQ010000000, and consists of
            sequences JBIGOQ010000001-JBIGOQ010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 378x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045573225.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:37:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,039
            CDSs (total)                      :: 4,921
            Genes (coding)                    :: 4,683
            CDSs (with protein)               :: 4,683
            Genes (RNA)                       :: 118
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 88
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 238
            CDSs (without protein)            :: 238
            Pseudo Genes (ambiguous residues) :: 0 of 238
            Pseudo Genes (frameshifted)       :: 108 of 238
            Pseudo Genes (incomplete)         :: 149 of 238
            Pseudo Genes (internal stop)      :: 32 of 238
            Pseudo Genes (multiple problems)  :: 47 of 238
            Pseudo Genes (short protein)      :: 1 of 238
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5136653
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E245"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGOQ010000001-JBIGOQ010000007
WGS_SCAFLD  NZ_JBIGOQ010000001-NZ_JBIGOQ010000007
//
LOCUS       NZ_JBIGRF010000000   5480788 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E130, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGRF000000000
VERSION     NZ_JBIGRF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130481
            Assembly: GCF_045574525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5480788)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGRF000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGRF000000000.  This version of the project
            (01) has the accession number NZ_JBIGRF010000000, and consists of
            sequences JBIGRF010000001-JBIGRF010000010.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 337x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045574525.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:40:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,483
            CDSs (total)                      :: 5,370
            Genes (coding)                    :: 5,045
            CDSs (with protein)               :: 5,045
            Genes (RNA)                       :: 113
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 325
            CDSs (without protein)            :: 325
            Pseudo Genes (ambiguous residues) :: 0 of 325
            Pseudo Genes (frameshifted)       :: 152 of 325
            Pseudo Genes (incomplete)         :: 176 of 325
            Pseudo Genes (internal stop)      :: 42 of 325
            Pseudo Genes (multiple problems)  :: 42 of 325
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5480788
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E130"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGRF010000001-JBIGRF010000010
WGS_SCAFLD  NZ_JBIGRF010000001-NZ_JBIGRF010000010
//
LOCUS       NZ_JBIGPS010000000   5382924 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E185, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGPS000000000
VERSION     NZ_JBIGPS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130533
            Assembly: GCF_045573705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5382924)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGPS000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGPS000000000.  This version of the project
            (01) has the accession number NZ_JBIGPS010000000, and consists of
            sequences JBIGPS010000001-JBIGPS010000012.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 442x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045573705.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:48:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,314
            CDSs (total)                      :: 5,197
            Genes (coding)                    :: 4,957
            CDSs (with protein)               :: 4,957
            Genes (RNA)                       :: 117
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 240
            CDSs (without protein)            :: 240
            Pseudo Genes (ambiguous residues) :: 0 of 240
            Pseudo Genes (frameshifted)       :: 111 of 240
            Pseudo Genes (incomplete)         :: 133 of 240
            Pseudo Genes (internal stop)      :: 26 of 240
            Pseudo Genes (multiple problems)  :: 27 of 240
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5382924
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E185"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGPS010000001-JBIGPS010000012
WGS_SCAFLD  NZ_JBIGPS010000001-NZ_JBIGPS010000012
//
LOCUS       NZ_JBIXEC010000000   5461460 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1080, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXEC000000000
VERSION     NZ_JBIXEC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247247
            Assembly: GCF_045621045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5461460)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXEC000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXEC000000000.  This version of the project
            (01) has the accession number NZ_JBIXEC010000000, and consists of
            sequences JBIXEC010000001-JBIXEC010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 278x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045621045.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:51:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,479
            CDSs (total)                      :: 5,364
            Genes (coding)                    :: 4,977
            CDSs (with protein)               :: 4,977
            Genes (RNA)                       :: 115
            rRNAs                             :: 8, 8, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 387
            CDSs (without protein)            :: 387
            Pseudo Genes (ambiguous residues) :: 0 of 387
            Pseudo Genes (frameshifted)       :: 223 of 387
            Pseudo Genes (incomplete)         :: 203 of 387
            Pseudo Genes (internal stop)      :: 44 of 387
            Pseudo Genes (multiple problems)  :: 72 of 387
            Pseudo Genes (short protein)      :: 1 of 387
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5461460
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1080"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXEC010000001-JBIXEC010000004
WGS_SCAFLD  NZ_JBIXEC010000001-NZ_JBIXEC010000004
//
LOCUS       NZ_VKVF01000000      5558626 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain AS012390, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VKVF00000000
VERSION     NZ_VKVF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12250709
            Assembly: GCF_010592685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5558626)
  AUTHORS   Ferreira,I.
  TITLE     Clinical Utility of Antibiotic Susceptibility Testing by Whole
            Genome Sequencing: Case Study from the Multicenter Clinical Trial
            of the Unyvero Lower Respiratory Traction Infection Application
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5558626)
  AUTHORS   Ferreira,I.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-JAN-2020) Ares Genetics, Ares Genetics, Karl-Farkas
            gasse, 18 1030, Austria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VKVF00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_VKVF00000000.  This version of the project
            (01) has the accession number NZ_VKVF01000000, and consists of
            sequences VKVF01000001-VKVF01001373.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: JAN-2019
            Assembly Method        :: SPAdes v. 3.12
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 130.55x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_010592685.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:31:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,264
            CDSs (total)                      :: 6,197
            Genes (coding)                    :: 5,766
            CDSs (with protein)               :: 5,766
            Genes (RNA)                       :: 67
            rRNAs                             :: 1, 2, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2, 4 (16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 431
            CDSs (without protein)            :: 431
            Pseudo Genes (ambiguous residues) :: 0 of 431
            Pseudo Genes (frameshifted)       :: 68 of 431
            Pseudo Genes (incomplete)         :: 373 of 431
            Pseudo Genes (internal stop)      :: 30 of 431
            Pseudo Genes (multiple problems)  :: 35 of 431
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5558626
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="AS012390"
                     /isolation_source="lung"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA"
                     /collection_date="2015-11-01"
                     /collected_by="Curetis GmbH"
WGS         VKVF01000001-VKVF01001373
WGS_SCAFLD  NZ_VKVF01000001-NZ_VKVF01001373
//
LOCUS       NZ_JBIGVQ010000000   5460933 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E623, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGVQ000000000
VERSION     NZ_JBIGVQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235601
            Assembly: GCF_045581685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5460933)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGVQ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGVQ000000000.  This version of the project
            (01) has the accession number NZ_JBIGVQ010000000, and consists of
            sequences JBIGVQ010000001-JBIGVQ010000003.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 327x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045581685.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:08:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,483
            CDSs (total)                      :: 5,374
            Genes (coding)                    :: 4,990
            CDSs (with protein)               :: 4,990
            Genes (RNA)                       :: 109
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 384
            CDSs (without protein)            :: 384
            Pseudo Genes (ambiguous residues) :: 0 of 384
            Pseudo Genes (frameshifted)       :: 213 of 384
            Pseudo Genes (incomplete)         :: 207 of 384
            Pseudo Genes (internal stop)      :: 50 of 384
            Pseudo Genes (multiple problems)  :: 75 of 384
            Pseudo Genes (short protein)      :: 1 of 384
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5460933
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E623"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGVQ010000001-JBIGVQ010000003
WGS_SCAFLD  NZ_JBIGVQ010000001-NZ_JBIGVQ010000003
//
LOCUS       NZ_JAPTGK020000000   5302116 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain EN5349, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAPTGK000000000
VERSION     NZ_JAPTGK000000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32075802
            Assembly: GCF_030167605.2
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5302116)
  AUTHORS   Bhattacharjee,A., Basak,P., Mitra,S., Sarkar,J., Dutta,S. and
            Basu,S.
  TITLE     Co-existence of plasmid-mediatedblaNDM-1andblaNDM-5inEscherichia
            colisequence type 167 and ST101 and their discrimination through
            restriction digestion
  JOURNAL   bioRxiv (2024) In press
  REMARK    DOI: 10.1101/2024.04.15.589586
REFERENCE   2  (bases 1 to 5302116)
  AUTHORS   Bhattacharjee,A. and Basu,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2023) Division of Bacteriology, ICMR-National
            Institute of Cholera and Enteric Diseases, P-33, C.I.T. Road,
            Scheme-XM, Beliaghata, Kolkata, West Bengal 700010, India
REFERENCE   3  (bases 1 to 5302116)
  AUTHORS   Bhattacharjee,A. and Basu,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-DEC-2022) Division of Bacteriology, National
            Institute of Cholera and Enteric Diseases, P-33, C.I.T. Road,
            Scheme-XM, Beliaghata, Kolkata, West Bengal 700010, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAPTGK000000000.2.
            
            On Dec 6, 2024 this sequence version replaced NZ_JAPTGK000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JAPTGK000000000.  This version of the project
            (02) has the accession number NZ_JAPTGK020000000, and consists of
            sequences JAPTGK020000001-JAPTGK020000007.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.5.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1.05x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_030167605.2-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:53:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,199
            CDSs (total)                      :: 5,079
            Genes (coding)                    :: 4,810
            CDSs (with protein)               :: 4,810
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 269
            CDSs (without protein)            :: 269
            Pseudo Genes (ambiguous residues) :: 0 of 269
            Pseudo Genes (frameshifted)       :: 81 of 269
            Pseudo Genes (incomplete)         :: 183 of 269
            Pseudo Genes (internal stop)      :: 52 of 269
            Pseudo Genes (multiple problems)  :: 42 of 269
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5302116
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="EN5349"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="India: Kolkata"
                     /lat_lon="22.5726 N 88.3639 E"
                     /collection_date="2017-05"
                     /collected_by="IPGME&R and SSKM Hospital, Division of
                     Neonatology"
WGS         JAPTGK020000001-JAPTGK020000007
WGS_SCAFLD  NZ_JAPTGK020000001-NZ_JAPTGK020000007
//
LOCUS       NZ_JBIGNR010000000   5002913 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E282, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGNR000000000
VERSION     NZ_JBIGNR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130614
            Assembly: GCF_045572635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5002913)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGNR000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGNR000000000.  This version of the project
            (01) has the accession number NZ_JBIGNR010000000, and consists of
            sequences JBIGNR010000001-JBIGNR010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 245x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045572635.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:40:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,898
            CDSs (total)                      :: 4,775
            Genes (coding)                    :: 4,603
            CDSs (with protein)               :: 4,603
            Genes (RNA)                       :: 123
            rRNAs                             :: 8, 8, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 172
            CDSs (without protein)            :: 172
            Pseudo Genes (ambiguous residues) :: 0 of 172
            Pseudo Genes (frameshifted)       :: 90 of 172
            Pseudo Genes (incomplete)         :: 87 of 172
            Pseudo Genes (internal stop)      :: 22 of 172
            Pseudo Genes (multiple problems)  :: 25 of 172
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5002913
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E282"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGNR010000001-JBIGNR010000005
WGS_SCAFLD  NZ_JBIGNR010000001-NZ_JBIGNR010000005
//
LOCUS       NZ_JBIGRE010000000   4934930 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E132, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGRE000000000
VERSION     NZ_JBIGRE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130482
            Assembly: GCF_045574505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4934930)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGRE000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGRE000000000.  This version of the project
            (01) has the accession number NZ_JBIGRE010000000, and consists of
            sequences JBIGRE010000001-JBIGRE010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 139x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045574505.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:40:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,862
            CDSs (total)                      :: 4,739
            Genes (coding)                    :: 4,423
            CDSs (with protein)               :: 4,423
            Genes (RNA)                       :: 123
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 316
            CDSs (without protein)            :: 316
            Pseudo Genes (ambiguous residues) :: 0 of 316
            Pseudo Genes (frameshifted)       :: 160 of 316
            Pseudo Genes (incomplete)         :: 183 of 316
            Pseudo Genes (internal stop)      :: 39 of 316
            Pseudo Genes (multiple problems)  :: 62 of 316
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4934930
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E132"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGRE010000001-JBIGRE010000008
WGS_SCAFLD  NZ_JBIGRE010000001-NZ_JBIGRE010000008
//
LOCUS       NZ_JBIGOO010000000   5174823 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E247, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGOO000000000
VERSION     NZ_JBIGOO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130582
            Assembly: GCF_045573145.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5174823)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGOO000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGOO000000000.  This version of the project
            (01) has the accession number NZ_JBIGOO010000000, and consists of
            sequences JBIGOO010000001-JBIGOO010000010.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 411x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045573145.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:41:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,102
            CDSs (total)                      :: 4,988
            Genes (coding)                    :: 4,682
            CDSs (with protein)               :: 4,682
            Genes (RNA)                       :: 114
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 306
            CDSs (without protein)            :: 306
            Pseudo Genes (ambiguous residues) :: 0 of 306
            Pseudo Genes (frameshifted)       :: 175 of 306
            Pseudo Genes (incomplete)         :: 157 of 306
            Pseudo Genes (internal stop)      :: 34 of 306
            Pseudo Genes (multiple problems)  :: 56 of 306
            Pseudo Genes (short protein)      :: 1 of 306
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5174823
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E247"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGOO010000001-JBIGOO010000010
WGS_SCAFLD  NZ_JBIGOO010000001-NZ_JBIGOO010000010
//
LOCUS       NZ_JBIGVW010000000   4950354 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E614, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGVW000000000
VERSION     NZ_JBIGVW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235594
            Assembly: GCF_045581835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4950354)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGVW000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGVW000000000.  This version of the project
            (01) has the accession number NZ_JBIGVW010000000, and consists of
            sequences JBIGVW010000001-JBIGVW010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 347x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045581835.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:10:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,845
            CDSs (total)                      :: 4,723
            Genes (coding)                    :: 4,381
            CDSs (with protein)               :: 4,381
            Genes (RNA)                       :: 122
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 342
            CDSs (without protein)            :: 342
            Pseudo Genes (ambiguous residues) :: 0 of 342
            Pseudo Genes (frameshifted)       :: 177 of 342
            Pseudo Genes (incomplete)         :: 163 of 342
            Pseudo Genes (internal stop)      :: 46 of 342
            Pseudo Genes (multiple problems)  :: 42 of 342
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4950354
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E614"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGVW010000001-JBIGVW010000007
WGS_SCAFLD  NZ_JBIGVW010000001-NZ_JBIGVW010000007
//
LOCUS       NZ_JBIGSZ010000000   5329177 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E55, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGSZ000000000
VERSION     NZ_JBIGSZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130414
            Assembly: GCF_045575455.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5329177)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGSZ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGSZ000000000.  This version of the project
            (01) has the accession number NZ_JBIGSZ010000000, and consists of
            sequences JBIGSZ010000001-JBIGSZ010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 81x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575455.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:57:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,304
            CDSs (total)                      :: 5,188
            Genes (coding)                    :: 4,912
            CDSs (with protein)               :: 4,912
            Genes (RNA)                       :: 116
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 276
            CDSs (without protein)            :: 276
            Pseudo Genes (ambiguous residues) :: 0 of 276
            Pseudo Genes (frameshifted)       :: 148 of 276
            Pseudo Genes (incomplete)         :: 146 of 276
            Pseudo Genes (internal stop)      :: 37 of 276
            Pseudo Genes (multiple problems)  :: 50 of 276
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5329177
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E55"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGSZ010000001-JBIGSZ010000008
WGS_SCAFLD  NZ_JBIGSZ010000001-NZ_JBIGSZ010000008
//
LOCUS       NZ_JAVFJB010000000   5034079 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain V539e5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAVFJB000000000
VERSION     NZ_JAVFJB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37074022
            Assembly: GCF_030908185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5034079)
  AUTHORS   Masarikova,M., Sukkar,I., Jamborova,I., Medvecky,M., Papousek,I.,
            Literak,I., Cizek,A. and Dolejska,M.
  TITLE     Antibiotic-resistant Escherichia coli from municipal treated
            wastewaters and Black-headed Gull nestlings on the recipient river
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5034079)
  AUTHORS   Sukkar,I.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-AUG-2023) Antimicrobial Resistance, CEITEC VETUNI,
            Palackeho trida, Brno 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAVFJB000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JAVFJB000000000.  This version of the project
            (01) has the accession number NZ_JAVFJB010000000, and consists of
            sequences JAVFJB010000001-JAVFJB010000136.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_030908185.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:53:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,042
            CDSs (total)                      :: 4,936
            Genes (coding)                    :: 4,703
            CDSs (with protein)               :: 4,703
            Genes (RNA)                       :: 106
            rRNAs                             :: 7, 8, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1 (5S, 16S)
            partial rRNAs                     :: 1, 7, 6 (5S, 16S, 23S)
            tRNAs                             :: 80
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 233
            CDSs (without protein)            :: 233
            Pseudo Genes (ambiguous residues) :: 0 of 233
            Pseudo Genes (frameshifted)       :: 79 of 233
            Pseudo Genes (incomplete)         :: 181 of 233
            Pseudo Genes (internal stop)      :: 34 of 233
            Pseudo Genes (multiple problems)  :: 53 of 233
            Pseudo Genes (short protein)      :: 1 of 233
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5034079
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="V539e5"
                     /isolation_source="treated wastewater effluent"
                     /db_xref="taxon:562"
                     /geo_loc_name="Czech Republic: Brno"
                     /collection_date="2012-03-26"
WGS         JAVFJB010000001-JAVFJB010000136
WGS_SCAFLD  NZ_JAVFJB010000001-NZ_JAVFJB010000136
//
LOCUS       NZ_JBIGWT010000000   5346016 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E581, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGWT000000000
VERSION     NZ_JBIGWT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235565
            Assembly: GCF_045582265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5346016)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGWT000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGWT000000000.  This version of the project
            (01) has the accession number NZ_JBIGWT010000000, and consists of
            sequences JBIGWT010000001-JBIGWT010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 370x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045582265.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:08:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,343
            CDSs (total)                      :: 5,230
            Genes (coding)                    :: 4,878
            CDSs (with protein)               :: 4,878
            Genes (RNA)                       :: 113
            rRNAs                             :: 8, 8, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 352
            CDSs (without protein)            :: 352
            Pseudo Genes (ambiguous residues) :: 0 of 352
            Pseudo Genes (frameshifted)       :: 210 of 352
            Pseudo Genes (incomplete)         :: 171 of 352
            Pseudo Genes (internal stop)      :: 50 of 352
            Pseudo Genes (multiple problems)  :: 70 of 352
            Pseudo Genes (short protein)      :: 1 of 352
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5346016
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E581"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGWT010000001-JBIGWT010000006
WGS_SCAFLD  NZ_JBIGWT010000001-NZ_JBIGWT010000006
//
LOCUS       NZ_JBIWZU010000000   5413185 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1210, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIWZU000000000
VERSION     NZ_JBIWZU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247359
            Assembly: GCF_045618785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5413185)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIWZU000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIWZU000000000.  This version of the project
            (01) has the accession number NZ_JBIWZU010000000, and consists of
            sequences JBIWZU010000001-JBIWZU010000010.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 147x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045618785.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:44:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,233
            CDSs (total)                      :: 5,110
            Genes (coding)                    :: 4,860
            CDSs (with protein)               :: 4,860
            Genes (RNA)                       :: 123
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 90
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 250
            CDSs (without protein)            :: 250
            Pseudo Genes (ambiguous residues) :: 0 of 250
            Pseudo Genes (frameshifted)       :: 113 of 250
            Pseudo Genes (incomplete)         :: 151 of 250
            Pseudo Genes (internal stop)      :: 50 of 250
            Pseudo Genes (multiple problems)  :: 58 of 250
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5413185
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1210"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIWZU010000001-JBIWZU010000010
WGS_SCAFLD  NZ_JBIWZU010000001-NZ_JBIWZU010000010
//
LOCUS       NZ_JBIXBK010000000   4755293 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1159, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXBK000000000
VERSION     NZ_JBIXBK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247317
            Assembly: GCF_045619585.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4755293)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXBK000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXBK000000000.  This version of the project
            (01) has the accession number NZ_JBIXBK010000000, and consists of
            sequences JBIXBK010000001-JBIXBK010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 326x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045619585.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:46:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,491
            Genes (coding)                    :: 4,312
            CDSs (with protein)               :: 4,312
            Genes (RNA)                       :: 115
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 179
            CDSs (without protein)            :: 179
            Pseudo Genes (ambiguous residues) :: 0 of 179
            Pseudo Genes (frameshifted)       :: 111 of 179
            Pseudo Genes (incomplete)         :: 64 of 179
            Pseudo Genes (internal stop)      :: 24 of 179
            Pseudo Genes (multiple problems)  :: 19 of 179
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4755293
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1159"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXBK010000001-JBIXBK010000004
WGS_SCAFLD  NZ_JBIXBK010000001-NZ_JBIXBK010000004
//
LOCUS       NZ_JBBBRU010000000   5150106 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CL19, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBBBRU000000000
VERSION     NZ_JBBBRU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40301763
            Assembly: GCF_037153515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5150106)
  AUTHORS   Kassem,I., Osman,M., Bisha,B., Ghorbani Tajani,A. and Hassan,J.
  TITLE     Comprehensive Assessment of Antibiotic-Resistant Escherichia coli
            in Broiler Chickens in Lebanon
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5150106)
  AUTHORS   Kassem,I., Osman,M., Bisha,B., Ghorbani Tajani,A. and Hassan,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-MAR-2024) Animal Science, University of Wyoming, 101
            Animal Science/Molecular Biology Complex, laramie, WY 82071, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBBRU000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBBBRU000000000.  This version of the project
            (01) has the accession number NZ_JBBBRU010000000, and consists of
            sequences JBBBRU010000001-JBBBRU010000143.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037153515.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:53:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,198
            CDSs (total)                      :: 5,096
            Genes (coding)                    :: 4,867
            CDSs (with protein)               :: 4,867
            Genes (RNA)                       :: 102
            rRNAs                             :: 6, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 229
            CDSs (without protein)            :: 229
            Pseudo Genes (ambiguous residues) :: 0 of 229
            Pseudo Genes (frameshifted)       :: 74 of 229
            Pseudo Genes (incomplete)         :: 156 of 229
            Pseudo Genes (internal stop)      :: 34 of 229
            Pseudo Genes (multiple problems)  :: 31 of 229
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5150106
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CL19"
                     /host="Retail Chicken"
                     /db_xref="taxon:562"
                     /geo_loc_name="Lebanon"
                     /collection_date="2017-02-19"
WGS         JBBBRU010000001-JBBBRU010000143
WGS_SCAFLD  NZ_JBBBRU010000001-NZ_JBBBRU010000143
//
LOCUS       NZ_JBJLOE010000000   5277142 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 761716, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLOE000000000
VERSION     NZ_JBJLOE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061618
            Assembly: GCF_045570435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5277142)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5277142)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLOE000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLOE000000000.  This version of the project
            (01) has the accession number NZ_JBJLOE010000000, and consists of
            sequences JBJLOE010000001-JBJLOE010000204.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.23
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045570435.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:30:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,290
            CDSs (total)                      :: 5,194
            Genes (coding)                    :: 4,974
            CDSs (with protein)               :: 4,974
            Genes (RNA)                       :: 96
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 81
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 220
            CDSs (without protein)            :: 220
            Pseudo Genes (ambiguous residues) :: 0 of 220
            Pseudo Genes (frameshifted)       :: 63 of 220
            Pseudo Genes (incomplete)         :: 148 of 220
            Pseudo Genes (internal stop)      :: 45 of 220
            Pseudo Genes (multiple problems)  :: 35 of 220
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5277142
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="761716"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2022-09-08"
                     /collected_by="HUMS"
WGS         JBJLOE010000001-JBJLOE010000204
WGS_SCAFLD  NZ_JBJLOE010000001-NZ_JBJLOE010000204
//
LOCUS       NZ_NLHT01000000      5057359 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain MOD1-EC5692, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NLHT00000000
VERSION     NZ_NLHT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05452883
            Assembly: GCF_002226715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5057359)
  AUTHORS   Gangiredla,J., Mammel,M.K., Barnaba,T.J., Tartera,C., Gebru,S.T.,
            Patel,I.R., Leonard,S.R., Kotewicz,M.L., Lampel,K.A., Elkins,C.A.
            and Lacher,D.W.
  TITLE     Species-Wide Collection of Escherichia coli Isolates for
            Examination of Genomic Diversity
  JOURNAL   Genome Announc 5 (50), e01321-17 (2017)
   PUBMED   29242221
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5057359)
  AUTHORS   Gangiredla,J., Barnaba,T., Gebru,S., Mammel,M.K., Lacher,D.,
            Tartera,C., Patel,I.R., Leonard,S., Lampel,K.A. and Elkins,C.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JUN-2017) CFSAN-ORS-DM-MMSB, US Food and Drug
            Administration, 5100 Paint Branch Parkway, College Park, MD 20740,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NLHT00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_NLHT00000000.  This version of the project
            (01) has the accession number NZ_NLHT01000000, and consists of
            sequences NLHT01000001-NLHT01000206.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 8.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 143.2x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002226715.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:05:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,055
            CDSs (total)                      :: 4,958
            Genes (coding)                    :: 4,704
            CDSs (with protein)               :: 4,704
            Genes (RNA)                       :: 97
            rRNAs                             :: 5, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 5 (5S)
            partial rRNAs                     :: 3, 3 (16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 254
            CDSs (without protein)            :: 254
            Pseudo Genes (ambiguous residues) :: 0 of 254
            Pseudo Genes (frameshifted)       :: 89 of 254
            Pseudo Genes (incomplete)         :: 183 of 254
            Pseudo Genes (internal stop)      :: 54 of 254
            Pseudo Genes (multiple problems)  :: 61 of 254
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5057359
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="MOD1-EC5692"
                     /isolation_source="antelope gemsbok feces"
                     /host="Oryx gazella"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA"
                     /collection_date="1981-01-01"
                     /collected_by="Pennsylvania State University| Escherichia
                     coli Reference Center"
WGS         NLHT01000001-NLHT01000206
WGS_SCAFLD  NZ_NLHT01000001-NZ_NLHT01000206
//
LOCUS       NZ_JBIGSU010000000   5428400 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E62, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGSU000000000
VERSION     NZ_JBIGSU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130420
            Assembly: GCF_045575375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5428400)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGSU000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGSU000000000.  This version of the project
            (01) has the accession number NZ_JBIGSU010000000, and consists of
            sequences JBIGSU010000001-JBIGSU010000012.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 759x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575375.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:48:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,382
            CDSs (total)                      :: 5,258
            Genes (coding)                    :: 4,855
            CDSs (with protein)               :: 4,855
            Genes (RNA)                       :: 124
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 90
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 403
            CDSs (without protein)            :: 403
            Pseudo Genes (ambiguous residues) :: 0 of 403
            Pseudo Genes (frameshifted)       :: 204 of 403
            Pseudo Genes (incomplete)         :: 215 of 403
            Pseudo Genes (internal stop)      :: 58 of 403
            Pseudo Genes (multiple problems)  :: 65 of 403
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5428400
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E62"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGSU010000001-JBIGSU010000012
WGS_SCAFLD  NZ_JBIGSU010000001-NZ_JBIGSU010000012
//
LOCUS       NZ_FZHB01000000      4835493 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli isolate F2_21, whole genome shotgun sequencing
            project.
ACCESSION   NZ_FZHB00000000
VERSION     NZ_FZHB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA104140503
            Assembly: GCF_900195915.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1
  AUTHORS   Djordjevic P,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JUN-2017) Ausgem, ithree, The ithree institute,
            University of Technology Sydney, P.O. Box 123, Broadway, NSW 2007,
            Australia, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FZHB00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_FZHB00000000.  This version of the project
            (01) has the accession number NZ_FZHB01000000, and consists of
            sequences FZHB01000001-FZHB01000087.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900195915.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:03:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,844
            CDSs (total)                      :: 4,743
            Genes (coding)                    :: 4,478
            CDSs (with protein)               :: 4,478
            Genes (RNA)                       :: 101
            rRNAs                             :: 7, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 3, 1 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 265
            CDSs (without protein)            :: 265
            Pseudo Genes (ambiguous residues) :: 0 of 265
            Pseudo Genes (frameshifted)       :: 94 of 265
            Pseudo Genes (incomplete)         :: 169 of 265
            Pseudo Genes (internal stop)      :: 42 of 265
            Pseudo Genes (multiple problems)  :: 38 of 265
            Pseudo Genes (short protein)      :: 1 of 265
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4835493
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /isolate="F2_21"
                     /isolation_source="Pig rectal swab"
                     /db_xref="taxon:562"
                     /collection_date="2007"
WGS         FZHB01000001-FZHB01000087
WGS_SCAFLD  NZ_FZHB01000001-NZ_FZHB01000087
//
LOCUS       NZ_JBIGSB010000000   5108367 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E89, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGSB000000000
VERSION     NZ_JBIGSB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130445
            Assembly: GCF_045574965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5108367)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGSB000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGSB000000000.  This version of the project
            (01) has the accession number NZ_JBIGSB010000000, and consists of
            sequences JBIGSB010000001-JBIGSB010000011.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 84x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045574965.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:40:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,059
            CDSs (total)                      :: 4,943
            Genes (coding)                    :: 4,663
            CDSs (with protein)               :: 4,663
            Genes (RNA)                       :: 116
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 280
            CDSs (without protein)            :: 280
            Pseudo Genes (ambiguous residues) :: 0 of 280
            Pseudo Genes (frameshifted)       :: 119 of 280
            Pseudo Genes (incomplete)         :: 156 of 280
            Pseudo Genes (internal stop)      :: 35 of 280
            Pseudo Genes (multiple problems)  :: 28 of 280
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5108367
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E89"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGSB010000001-JBIGSB010000011
WGS_SCAFLD  NZ_JBIGSB010000001-NZ_JBIGSB010000011
//
LOCUS       NZ_NLHD01000000      5079918 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain MOD1-EC5709, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NLHD00000000
VERSION     NZ_NLHD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05452912
            Assembly: GCF_002225885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5079918)
  AUTHORS   Gangiredla,J., Mammel,M.K., Barnaba,T.J., Tartera,C., Gebru,S.T.,
            Patel,I.R., Leonard,S.R., Kotewicz,M.L., Lampel,K.A., Elkins,C.A.
            and Lacher,D.W.
  TITLE     Species-Wide Collection of Escherichia coli Isolates for
            Examination of Genomic Diversity
  JOURNAL   Genome Announc 5 (50), e01321-17 (2017)
   PUBMED   29242221
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5079918)
  AUTHORS   Gangiredla,J., Barnaba,T., Gebru,S., Mammel,M.K., Lacher,D.,
            Tartera,C., Patel,I.R., Leonard,S., Lampel,K.A. and Elkins,C.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JUN-2017) CFSAN-ORS-DM-MMSB, US Food and Drug
            Administration, 5100 Paint Branch Parkway, College Park, MD 20740,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NLHD00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_NLHD00000000.  This version of the project
            (01) has the accession number NZ_NLHD01000000, and consists of
            sequences NLHD01000001-NLHD01000183.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 47.3x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002225885.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:03:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,115
            CDSs (total)                      :: 5,006
            Genes (coding)                    :: 4,709
            CDSs (with protein)               :: 4,709
            Genes (RNA)                       :: 109
            rRNAs                             :: 7, 6, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 5, 2 (5S, 16S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 297
            CDSs (without protein)            :: 297
            Pseudo Genes (ambiguous residues) :: 0 of 297
            Pseudo Genes (frameshifted)       :: 82 of 297
            Pseudo Genes (incomplete)         :: 221 of 297
            Pseudo Genes (internal stop)      :: 39 of 297
            Pseudo Genes (multiple problems)  :: 39 of 297
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5079918
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="MOD1-EC5709"
                     /serotype="O15:H28"
                     /isolation_source="Feces"
                     /host="Bos taurus"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA"
                     /collection_date="1981-03-03"
                     /collected_by="Pennsylvania State University| Escherichia
                     coli Reference Center"
WGS         NLHD01000001-NLHD01000183
WGS_SCAFLD  NZ_NLHD01000001-NZ_NLHD01000183
//
LOCUS       NZ_JBJLOA010000000   5032484 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 863253, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLOA000000000
VERSION     NZ_JBJLOA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061622
            Assembly: GCF_045570615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5032484)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5032484)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLOA000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLOA000000000.  This version of the project
            (01) has the accession number NZ_JBJLOA010000000, and consists of
            sequences JBJLOA010000001-JBJLOA010000490.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.27
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045570615.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:31:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,317
            CDSs (total)                      :: 5,227
            Genes (coding)                    :: 4,883
            CDSs (with protein)               :: 4,883
            Genes (RNA)                       :: 90
            rRNAs                             :: 2, 3 (16S, 23S)
            partial rRNAs                     :: 2, 3 (16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 97 of 344
            Pseudo Genes (incomplete)         :: 250 of 344
            Pseudo Genes (internal stop)      :: 44 of 344
            Pseudo Genes (multiple problems)  :: 41 of 344
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5032484
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="863253"
                     /isolation_source="RECTAL SWAB"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-01-27"
                     /collected_by="HUMS"
WGS         JBJLOA010000001-JBJLOA010000490
WGS_SCAFLD  NZ_JBJLOA010000001-NZ_JBJLOA010000490
//
LOCUS       NZ_NKOV01000000      5189493 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain MOD1-EC1656, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NKOV00000000
VERSION     NZ_NKOV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05607385
            Assembly: GCF_002460625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5189493)
  AUTHORS   Gangiredla,J., Mammel,M.K., Barnaba,T.J., Tartera,C., Gebru,S.T.,
            Patel,I.R., Leonard,S.R., Kotewicz,M.L., Lampel,K.A., Elkins,C.A.
            and Lacher,D.W.
  TITLE     Species-Wide Collection of Escherichia coli Isolates for
            Examination of Genomic Diversity
  JOURNAL   Genome Announc 5 (50), e01321-17 (2017)
   PUBMED   29242221
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5189493)
  AUTHORS   Gangiredla,J., Barnaba,T., Gebru,S., Mammel,M.K., Lacher,D.,
            Tartera,C., Patel,I.R., Leonard,S., Lampel,K.A. and Elkins,C.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JUN-2017) CFSAN-ORS-DM-MMSB, US Food and Drug
            Administration, 5100 Paint Branch Parkway, College Park, MD 20740,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NKOV00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_NKOV00000000.  This version of the project
            (01) has the accession number NZ_NKOV01000000, and consists of
            sequences NKOV01000001-NKOV01000334.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 37.1x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002460625.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:19:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,379
            CDSs (total)                      :: 5,283
            Genes (coding)                    :: 4,930
            CDSs (with protein)               :: 4,930
            Genes (RNA)                       :: 96
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 84
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 353
            CDSs (without protein)            :: 353
            Pseudo Genes (ambiguous residues) :: 0 of 353
            Pseudo Genes (frameshifted)       :: 105 of 353
            Pseudo Genes (incomplete)         :: 242 of 353
            Pseudo Genes (internal stop)      :: 50 of 353
            Pseudo Genes (multiple problems)  :: 37 of 353
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5189493
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="MOD1-EC1656"
                     /serotype="O121:H19"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA"
                     /collection_date="1998"
                     /collected_by="Michigan State University"
WGS         NKOV01000001-NKOV01000334
WGS_SCAFLD  NZ_NKOV01000001-NZ_NKOV01000334
//
LOCUS       NZ_JBIGNY010000000   5404125 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E273, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGNY000000000
VERSION     NZ_JBIGNY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130606
            Assembly: GCF_045572795.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5404125)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGNY000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGNY000000000.  This version of the project
            (01) has the accession number NZ_JBIGNY010000000, and consists of
            sequences JBIGNY010000001-JBIGNY010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 613x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045572795.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:40:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,216
            CDSs (total)                      :: 5,096
            Genes (coding)                    :: 4,832
            CDSs (with protein)               :: 4,832
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 264
            CDSs (without protein)            :: 264
            Pseudo Genes (ambiguous residues) :: 0 of 264
            Pseudo Genes (frameshifted)       :: 121 of 264
            Pseudo Genes (incomplete)         :: 161 of 264
            Pseudo Genes (internal stop)      :: 49 of 264
            Pseudo Genes (multiple problems)  :: 59 of 264
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5404125
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E273"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGNY010000001-JBIGNY010000004
WGS_SCAFLD  NZ_JBIGNY010000001-NZ_JBIGNY010000004
//
LOCUS       NZ_FZGJ01000000      5347279 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli isolate F1_6F, whole genome shotgun sequencing
            project.
ACCESSION   NZ_FZGJ00000000
VERSION     NZ_FZGJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA104140453
            Assembly: GCF_900195395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1
  AUTHORS   Djordjevic P,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JUN-2017) Ausgem, ithree, The ithree institute,
            University of Technology Sydney, P.O. Box 123, Broadway, NSW 2007,
            Australia, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FZGJ00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_FZGJ00000000.  This version of the project
            (01) has the accession number NZ_FZGJ01000000, and consists of
            sequences FZGJ01000001-FZGJ01000119.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900195395.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:21:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,520
            CDSs (total)                      :: 5,420
            Genes (coding)                    :: 5,055
            CDSs (with protein)               :: 5,055
            Genes (RNA)                       :: 100
            rRNAs                             :: 6, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 2 (5S, 16S)
            tRNAs                             :: 83
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 365
            CDSs (without protein)            :: 365
            Pseudo Genes (ambiguous residues) :: 0 of 365
            Pseudo Genes (frameshifted)       :: 106 of 365
            Pseudo Genes (incomplete)         :: 268 of 365
            Pseudo Genes (internal stop)      :: 54 of 365
            Pseudo Genes (multiple problems)  :: 57 of 365
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5347279
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /isolate="F1_6F"
                     /isolation_source="Pig rectal swab"
                     /db_xref="taxon:562"
                     /collection_date="2007"
WGS         FZGJ01000001-FZGJ01000119
WGS_SCAFLD  NZ_FZGJ01000001-NZ_FZGJ01000119
//
LOCUS       NZ_JBIGPA010000000   5188008 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E226, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGPA000000000
VERSION     NZ_JBIGPA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130563
            Assembly: GCF_045573385.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5188008)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGPA000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGPA000000000.  This version of the project
            (01) has the accession number NZ_JBIGPA010000000, and consists of
            sequences JBIGPA010000001-JBIGPA010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 110x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045573385.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:42:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,069
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,733
            CDSs (with protein)               :: 4,733
            Genes (RNA)                       :: 115
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 221
            CDSs (without protein)            :: 221
            Pseudo Genes (ambiguous residues) :: 0 of 221
            Pseudo Genes (frameshifted)       :: 111 of 221
            Pseudo Genes (incomplete)         :: 132 of 221
            Pseudo Genes (internal stop)      :: 24 of 221
            Pseudo Genes (multiple problems)  :: 41 of 221
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5188008
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E226"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGPA010000001-JBIGPA010000006
WGS_SCAFLD  NZ_JBIGPA010000001-NZ_JBIGPA010000006
//
LOCUS       NZ_JBIXBR010000000   5023704 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1151, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXBR000000000
VERSION     NZ_JBIXBR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247310
            Assembly: GCF_045619845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5023704)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXBR000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXBR000000000.  This version of the project
            (01) has the accession number NZ_JBIXBR010000000, and consists of
            sequences JBIXBR010000001-JBIXBR010000013.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 727x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045619845.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:38:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,850
            Genes (coding)                    :: 4,552
            CDSs (with protein)               :: 4,552
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 298
            CDSs (without protein)            :: 298
            Pseudo Genes (ambiguous residues) :: 0 of 298
            Pseudo Genes (frameshifted)       :: 146 of 298
            Pseudo Genes (incomplete)         :: 157 of 298
            Pseudo Genes (internal stop)      :: 41 of 298
            Pseudo Genes (multiple problems)  :: 44 of 298
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5023704
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1151"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXBR010000001-JBIXBR010000013
WGS_SCAFLD  NZ_JBIXBR010000001-NZ_JBIXBR010000013
//
LOCUS       NZ_JBIGUW010000000   4996111 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E643, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGUW000000000
VERSION     NZ_JBIGUW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235621
            Assembly: GCF_045581315.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4996111)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGUW000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGUW000000000.  This version of the project
            (01) has the accession number NZ_JBIGUW010000000, and consists of
            sequences JBIGUW010000001-JBIGUW010000010.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 241x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045581315.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,946
            CDSs (total)                      :: 4,824
            Genes (coding)                    :: 4,538
            CDSs (with protein)               :: 4,538
            Genes (RNA)                       :: 122
            rRNAs                             :: 7, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 286
            CDSs (without protein)            :: 286
            Pseudo Genes (ambiguous residues) :: 0 of 286
            Pseudo Genes (frameshifted)       :: 144 of 286
            Pseudo Genes (incomplete)         :: 144 of 286
            Pseudo Genes (internal stop)      :: 36 of 286
            Pseudo Genes (multiple problems)  :: 33 of 286
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4996111
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E643"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGUW010000001-JBIGUW010000010
WGS_SCAFLD  NZ_JBIGUW010000001-NZ_JBIGUW010000010
//
LOCUS       NZ_JAFCYU010000000   5439532 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 1472e, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAFCYU000000000
VERSION     NZ_JAFCYU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17763011
            Assembly: GCF_016858985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5439532)
  AUTHORS   Nesporova,K., Valcek,A., Papagiannitsis,C., Kutilova,I.,
            Jamborova,I., Davidova Gerzova,L., Bitar,I., Hrabak,J., Literak,I.
            and Dolejska,M.
  TITLE     Multi-drug resistant plasmids carrying mcr-5 were found in
            Escherichia coli isolates from farms which purchased chickens from
            the same breeding company in Paraguay
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5439532)
  AUTHORS   Nesporova,K. and Valcek,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2021) Department of Biology and Wildlife
            Diseases, University of Veterinary and Pharmaceutical Sciences
            Brno, Palackeho 1, Brno, Czechia 61242, Czech Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAFCYU000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JAFCYU000000000.  This version of the project
            (01) has the accession number NZ_JAFCYU010000000, and consists of
            sequences JAFCYU010000001-JAFCYU010000339.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_016858985.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,612
            CDSs (total)                      :: 5,496
            Genes (coding)                    :: 5,171
            CDSs (with protein)               :: 5,171
            Genes (RNA)                       :: 116
            rRNAs                             :: 8, 3, 15 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1 (5S, 16S)
            partial rRNAs                     :: 2, 2, 15 (5S, 16S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 325
            CDSs (without protein)            :: 325
            Pseudo Genes (ambiguous residues) :: 0 of 325
            Pseudo Genes (frameshifted)       :: 77 of 325
            Pseudo Genes (incomplete)         :: 250 of 325
            Pseudo Genes (internal stop)      :: 30 of 325
            Pseudo Genes (multiple problems)  :: 28 of 325
            Pseudo Genes (short protein)      :: 1 of 325
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5439532
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="1472e"
                     /host="Gallus gallus"
                     /db_xref="taxon:562"
                     /geo_loc_name="Paraguay: Paraguari"
                     /collection_date="2012-09"
WGS         JAFCYU010000001-JAFCYU010000339
WGS_SCAFLD  NZ_JAFCYU010000001-NZ_JAFCYU010000339
//
LOCUS       NZ_PQPT01000000      4908570 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain EP103, whole genome shotgun sequencing
            project.
ACCESSION   NZ_PQPT00000000
VERSION     NZ_PQPT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08398260
            Assembly: GCF_017117565.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4908570)
  AUTHORS   Xu,Y., Sun,H., Bai,X., Fu,S., Fan,R. and Xiong,Y.
  TITLE     Occurrence of multidrug-resistant and ESBL-producing atypical
            enteropathogenic Escherichia coli in China
  JOURNAL   Gut Pathog 10, 8 (2018)
   PUBMED   30038667
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4908570)
  AUTHORS   Xu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2018) National Institute for Communicable Disease
            Control and Prevention, China CDC, 155 Changbai Road Changping
            District, Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PQPT00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_PQPT00000000.  This version of the project
            (01) has the accession number NZ_PQPT01000000, and consists of
            sequences PQPT01000001-PQPT01000146.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_017117565.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:32:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,036
            CDSs (total)                      :: 4,932
            Genes (coding)                    :: 4,629
            CDSs (with protein)               :: 4,629
            Genes (RNA)                       :: 104
            rRNAs                             :: 6, 4, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 3, 4, 3 (5S, 16S, 23S)
            tRNAs                             :: 80
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 303
            CDSs (without protein)            :: 303
            Pseudo Genes (ambiguous residues) :: 0 of 303
            Pseudo Genes (frameshifted)       :: 80 of 303
            Pseudo Genes (incomplete)         :: 231 of 303
            Pseudo Genes (internal stop)      :: 45 of 303
            Pseudo Genes (multiple problems)  :: 45 of 303
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4908570
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="EP103"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="China: Henan"
                     /collection_date="2011-11-17"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention"
WGS         PQPT01000001-PQPT01000146
WGS_SCAFLD  NZ_PQPT01000001-NZ_PQPT01000146
//
LOCUS       NZ_JBIGXI010000000   4936915 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E554, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGXI000000000
VERSION     NZ_JBIGXI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235541
            Assembly: GCF_045582605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4936915)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGXI000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGXI000000000.  This version of the project
            (01) has the accession number NZ_JBIGXI010000000, and consists of
            sequences JBIGXI010000001-JBIGXI010000003.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 99x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045582605.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:15:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,798
            CDSs (total)                      :: 4,678
            Genes (coding)                    :: 4,520
            CDSs (with protein)               :: 4,520
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 90
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 158
            CDSs (without protein)            :: 158
            Pseudo Genes (ambiguous residues) :: 0 of 158
            Pseudo Genes (frameshifted)       :: 68 of 158
            Pseudo Genes (incomplete)         :: 98 of 158
            Pseudo Genes (internal stop)      :: 21 of 158
            Pseudo Genes (multiple problems)  :: 27 of 158
            Pseudo Genes (short protein)      :: 1 of 158
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4936915
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E554"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGXI010000001-JBIGXI010000003
WGS_SCAFLD  NZ_JBIGXI010000001-NZ_JBIGXI010000003
//
LOCUS       NZ_JBIXEZ010000000   5478554 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1053, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXEZ000000000
VERSION     NZ_JBIXEZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247224
            Assembly: GCF_045621545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5478554)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXEZ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXEZ000000000.  This version of the project
            (01) has the accession number NZ_JBIXEZ010000000, and consists of
            sequences JBIXEZ010000001-JBIXEZ010000036.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 455x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045621545.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:41:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,552
            CDSs (total)                      :: 5,426
            Genes (coding)                    :: 5,098
            CDSs (with protein)               :: 5,098
            Genes (RNA)                       :: 126
            rRNAs                             :: 8, 8, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            tRNAs                             :: 93
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 328
            CDSs (without protein)            :: 328
            Pseudo Genes (ambiguous residues) :: 0 of 328
            Pseudo Genes (frameshifted)       :: 187 of 328
            Pseudo Genes (incomplete)         :: 158 of 328
            Pseudo Genes (internal stop)      :: 24 of 328
            Pseudo Genes (multiple problems)  :: 38 of 328
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5478554
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1053"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXEZ010000001-JBIXEZ010000036
WGS_SCAFLD  NZ_JBIXEZ010000001-NZ_JBIXEZ010000036
//
LOCUS       NZ_JBIGSQ010000000   5456268 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E66, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGSQ000000000
VERSION     NZ_JBIGSQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130424
            Assembly: GCF_045575285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5456268)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGSQ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGSQ000000000.  This version of the project
            (01) has the accession number NZ_JBIGSQ010000000, and consists of
            sequences JBIGSQ010000001-JBIGSQ010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 191x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575285.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:59:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,355
            CDSs (total)                      :: 5,233
            Genes (coding)                    :: 4,960
            CDSs (with protein)               :: 4,960
            Genes (RNA)                       :: 122
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 273
            CDSs (without protein)            :: 273
            Pseudo Genes (ambiguous residues) :: 0 of 273
            Pseudo Genes (frameshifted)       :: 123 of 273
            Pseudo Genes (incomplete)         :: 164 of 273
            Pseudo Genes (internal stop)      :: 39 of 273
            Pseudo Genes (multiple problems)  :: 49 of 273
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5456268
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E66"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGSQ010000001-JBIGSQ010000004
WGS_SCAFLD  NZ_JBIGSQ010000001-NZ_JBIGSQ010000004
//
LOCUS       NZ_JAYKKU010000000   5466252 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain IN-MR210EC, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAYKKU000000000
VERSION     NZ_JAYKKU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN33769292
            Assembly: GCF_045626985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5466252)
  AUTHORS   Bhattacharjee,A., Basak,P., Mitra,S., Sarkar,J., Dutta,S. and
            Basu,S.
  TITLE     Co-existence of plasmid-mediatedblaNDM-1andblaNDM-5inEscherichia
            colisequence type 167 and ST101 and their discrimination through
            restriction digestion
  JOURNAL   bioRxiv (2024) In press
  REMARK    DOI: 10.1101/2024.04.15.589586
REFERENCE   2  (bases 1 to 5466252)
  AUTHORS   Basak,P. and Basu,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-DEC-2023) Division of Bacteriology, ICMR-National
            Institute of Cholera and Enteric Diseases, P-33, C.I.T. Road,
            Scheme-XM, Beliaghata, Kolkata, West Bengal 700010, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAYKKU000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JAYKKU000000000.  This version of the project
            (01) has the accession number NZ_JAYKKU010000000, and consists of
            sequences JAYKKU010000001-JAYKKU010000006.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.5.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 0.96x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045626985.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:57:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,466
            CDSs (total)                      :: 5,337
            Genes (coding)                    :: 5,120
            CDSs (with protein)               :: 5,120
            Genes (RNA)                       :: 129
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 98
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 217
            CDSs (without protein)            :: 217
            Pseudo Genes (ambiguous residues) :: 0 of 217
            Pseudo Genes (frameshifted)       :: 72 of 217
            Pseudo Genes (incomplete)         :: 135 of 217
            Pseudo Genes (internal stop)      :: 42 of 217
            Pseudo Genes (multiple problems)  :: 30 of 217
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5466252
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="IN-MR210EC"
                     /isolation_source="Rectal"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="India: Kolkata"
                     /lat_lon="22.53 N 88.34 E"
                     /collection_date="2017"
WGS         JAYKKU010000001-JAYKKU010000006
WGS_SCAFLD  NZ_JAYKKU010000001-NZ_JAYKKU010000006
//
LOCUS       NZ_JBHZOC010000000   5231605 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain JNE018, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBHZOC000000000
VERSION     NZ_JBHZOC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44011814
            Assembly: GCF_044470665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5231605)
  AUTHORS   Wei,X. and Liu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-OCT-2024) Institute of Animal Science and Veterinary
            Medicine, Shandong Academy of Agricultural Sciences, Gongyebei
            street 23788, Jinan, Shandong 250000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBHZOC000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBHZOC000000000.  This version of the project
            (01) has the accession number NZ_JBHZOC010000000, and consists of
            sequences JBHZOC010000001-JBHZOC010000216.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 400x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_044470665.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:15:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,231
            CDSs (total)                      :: 5,135
            Genes (coding)                    :: 4,913
            CDSs (with protein)               :: 4,913
            Genes (RNA)                       :: 96
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 81
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 222
            CDSs (without protein)            :: 222
            Pseudo Genes (ambiguous residues) :: 0 of 222
            Pseudo Genes (frameshifted)       :: 68 of 222
            Pseudo Genes (incomplete)         :: 164 of 222
            Pseudo Genes (internal stop)      :: 23 of 222
            Pseudo Genes (multiple problems)  :: 30 of 222
            Pseudo Genes (short protein)      :: 1 of 222
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5231605
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="JNE018"
                     /serotype="O166"
                     /isolation_source="Diseased organs, secretions and
                     abnormal feces"
                     /host="poultry"
                     /db_xref="taxon:562"
                     /geo_loc_name="China: Nanjing, Jiangsu Province"
                     /collection_date="2022"
                     /collected_by="Shandong Academy of Agricultural Sciences"
WGS         JBHZOC010000001-JBHZOC010000216
WGS_SCAFLD  NZ_JBHZOC010000001-NZ_JBHZOC010000216
//
LOCUS       NZ_JBIXFF010000000   5280411 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1047, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXFF000000000
VERSION     NZ_JBIXFF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247218
            Assembly: GCF_045621565.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5280411)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXFF000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXFF000000000.  This version of the project
            (01) has the accession number NZ_JBIXFF010000000, and consists of
            sequences JBIXFF010000001-JBIXFF010000012.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 134x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045621565.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:48:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,142
            CDSs (total)                      :: 5,019
            Genes (coding)                    :: 4,789
            CDSs (with protein)               :: 4,789
            Genes (RNA)                       :: 123
            rRNAs                             :: 8, 8, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 230
            CDSs (without protein)            :: 230
            Pseudo Genes (ambiguous residues) :: 0 of 230
            Pseudo Genes (frameshifted)       :: 115 of 230
            Pseudo Genes (incomplete)         :: 123 of 230
            Pseudo Genes (internal stop)      :: 32 of 230
            Pseudo Genes (multiple problems)  :: 38 of 230
            Pseudo Genes (short protein)      :: 1 of 230
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5280411
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1047"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXFF010000001-JBIXFF010000012
WGS_SCAFLD  NZ_JBIXFF010000001-NZ_JBIXFF010000012
//
LOCUS       NZ_NLYW01000000      4794753 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain MOD1-EC6374, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NLYW00000000
VERSION     NZ_NLYW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04992991
            Assembly: GCF_002513875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4794753)
  AUTHORS   Gangiredla,J., Mammel,M.K., Barnaba,T.J., Tartera,C., Gebru,S.T.,
            Patel,I.R., Leonard,S.R., Kotewicz,M.L., Lampel,K.A., Elkins,C.A.
            and Lacher,D.W.
  TITLE     Species-Wide Collection of Escherichia coli Isolates for
            Examination of Genomic Diversity
  JOURNAL   Genome Announc 5 (50), e01321-17 (2017)
   PUBMED   29242221
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4794753)
  AUTHORS   Gangiredla,J., Lacher,D.W., Mammel,M.K., Barnaba,T., Tartera,C.,
            Gebru,S., Patel,I.R., Leonard,S.R., Lampel,K.A. and Elkins,C.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2017) CFSAN-ORS-DM-MMSB, US Food and Drug
            Administration, 5100 Paint Branch Parkway, College Park, MD 20740,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NLYW00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_NLYW00000000.  This version of the project
            (01) has the accession number NZ_NLYW01000000, and consists of
            sequences NLYW01000001-NLYW01000157.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 27.1x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002513875.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:15:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,757
            CDSs (total)                      :: 4,666
            Genes (coding)                    :: 4,480
            CDSs (with protein)               :: 4,480
            Genes (RNA)                       :: 91
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 81
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 53 of 186
            Pseudo Genes (incomplete)         :: 134 of 186
            Pseudo Genes (internal stop)      :: 28 of 186
            Pseudo Genes (multiple problems)  :: 26 of 186
            Pseudo Genes (short protein)      :: 1 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4794753
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="MOD1-EC6374"
                     /serotype="O37:H31"
                     /isolation_source="ovine bronchus"
                     /host="ovine"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA"
                     /collection_date="1988-02-18"
                     /collected_by="Pennsylvania State University| Escherichia
                     coli Reference Center"
WGS         NLYW01000001-NLYW01000157
WGS_SCAFLD  NZ_NLYW01000001-NZ_NLYW01000157
//
LOCUS       NZ_JBIGZE010000000   5184205 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E485, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGZE000000000
VERSION     NZ_JBIGZE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235481
            Assembly: GCF_045583585.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5184205)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGZE000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGZE000000000.  This version of the project
            (01) has the accession number NZ_JBIGZE010000000, and consists of
            sequences JBIGZE010000001-JBIGZE010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 263x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045583585.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:20:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,127
            CDSs (total)                      :: 5,007
            Genes (coding)                    :: 4,736
            CDSs (with protein)               :: 4,736
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 271
            CDSs (without protein)            :: 271
            Pseudo Genes (ambiguous residues) :: 0 of 271
            Pseudo Genes (frameshifted)       :: 153 of 271
            Pseudo Genes (incomplete)         :: 128 of 271
            Pseudo Genes (internal stop)      :: 25 of 271
            Pseudo Genes (multiple problems)  :: 32 of 271
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5184205
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E485"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGZE010000001-JBIGZE010000007
WGS_SCAFLD  NZ_JBIGZE010000001-NZ_JBIGZE010000007
//
LOCUS       NZ_AIBH01000000      4913517 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli C639_08, whole genome shotgun sequencing project.
ACCESSION   NZ_AIBH00000000
VERSION     NZ_AIBH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02435964
            Assembly: GCF_000410655.2
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli C639_08
  ORGANISM  Escherichia coli C639_08
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4913517)
  AUTHORS   Hazen,T.H., Sahl,J.W., Fraser,C.M., Donnenberg,M.S., Scheutz,F. and
            Rasko,D.A.
  TITLE     Draft Genome Sequences of Three O157 Enteropathogenic Escherichia
            coli Isolates
  JOURNAL   Genome Announc 1 (4), e00516-13 (2013)
   PUBMED   23868135
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4913517)
  AUTHORS   Hazen,T.H., Sahl,J.W. and Rasko,D.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JAN-2012) Institute for Genome Sciences, University
            of Maryland School of Medicine, 801 West Baltimore Street, Suite
            619, Baltimore, MD 21201, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AIBH00000000.1.
            
            On Nov 11, 2015 this sequence version replaced gi:511644032.
            The Escherichia coli C639_08 whole genome shotgun (WGS) project has
            the project accession NZ_AIBH00000000.  This version of the project
            (01) has the accession number NZ_AIBH01000000, and consists of
            sequences AIBH01000124-AIBH01000149.
            Source DNA available from Dr. David Rasko, University of Maryland
            School of Medicine, 801 West Baltimore Street, Baltimore, MD,
            21201.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.1.04
            Genome Coverage       :: 254x
            Sequencing Technology :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000410655.2-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:16:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,882
            Genes (coding)                    :: 4,662
            CDSs (with protein)               :: 4,662
            Genes (RNA)                       :: 86
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 75
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 220
            CDSs (without protein)            :: 220
            Pseudo Genes (ambiguous residues) :: 0 of 220
            Pseudo Genes (frameshifted)       :: 90 of 220
            Pseudo Genes (incomplete)         :: 156 of 220
            Pseudo Genes (internal stop)      :: 47 of 220
            Pseudo Genes (multiple problems)  :: 59 of 220
            Pseudo Genes (short protein)      :: 2 of 220
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4913517
                     /organism="Escherichia coli C639_08"
                     /mol_type="genomic DNA"
                     /strain="C639_08"
                     /isolation_source="stool sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1126911"
                     /geo_loc_name="Denmark"
WGS         AIBH01000001-AIBH01000122
WGS         AIBH01000124-AIBH01000149
WGS_SCAFLD  NZ_AIBH01000001-NZ_AIBH01000122
WGS_SCAFLD  NZ_AIBH01000124-NZ_AIBH01000149
//
LOCUS       NZ_JAAFBQ010000000   5347342 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain BS28R-A, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAAFBQ000000000
VERSION     NZ_JAAFBQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13944177
            Assembly: GCF_013395685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5347342)
  AUTHORS   Buedel,T., Endimiani,A. and Campos-Madueno,E.I.
  TITLE     Multidrug resistant Enterobacterales in travelers after visiting
            Tanzania
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5347342)
  AUTHORS   Buedel,T., Endimiani,A. and Campos-Madueno,E.I.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JAN-2020) Institute for Infectious Diseases,
            University of Bern, Friedbuehlstrasse 51, Bern 3010, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAAFBQ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JAAFBQ000000000.  This version of the project
            (01) has the accession number NZ_JAAFBQ010000000, and consists of
            sequences JAAFBQ010000001-JAAFBQ010000211.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 430x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013395685.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:32:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,330
            CDSs (total)                      :: 5,240
            Genes (coding)                    :: 4,941
            CDSs (with protein)               :: 4,941
            Genes (RNA)                       :: 90
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2 (5S, 16S)
            tRNAs                             :: 74
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 299
            CDSs (without protein)            :: 299
            Pseudo Genes (ambiguous residues) :: 0 of 299
            Pseudo Genes (frameshifted)       :: 90 of 299
            Pseudo Genes (incomplete)         :: 227 of 299
            Pseudo Genes (internal stop)      :: 52 of 299
            Pseudo Genes (multiple problems)  :: 60 of 299
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5347342
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="BS28R-A"
                     /isolation_source="rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Switzerland"
                     /lat_lon="47.33 N 7.34 E"
                     /collection_date="2019"
                     /collected_by="Swiss TPH"
WGS         JAAFBQ010000001-JAAFBQ010000211
WGS_SCAFLD  NZ_JAAFBQ010000001-NZ_JAAFBQ010000211
//
LOCUS       NZ_JBIXES010000000   5516055 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1062, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXES000000000
VERSION     NZ_JBIXES000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247231
            Assembly: GCF_045621375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5516055)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXES000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXES000000000.  This version of the project
            (01) has the accession number NZ_JBIXES010000000, and consists of
            sequences JBIXES010000001-JBIXES010000014.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 415x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045621375.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:53:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,503
            CDSs (total)                      :: 5,386
            Genes (coding)                    :: 4,997
            CDSs (with protein)               :: 4,997
            Genes (RNA)                       :: 117
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 389
            CDSs (without protein)            :: 389
            Pseudo Genes (ambiguous residues) :: 0 of 389
            Pseudo Genes (frameshifted)       :: 229 of 389
            Pseudo Genes (incomplete)         :: 184 of 389
            Pseudo Genes (internal stop)      :: 43 of 389
            Pseudo Genes (multiple problems)  :: 61 of 389
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5516055
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1062"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXES010000001-JBIXES010000014
WGS_SCAFLD  NZ_JBIXES010000001-NZ_JBIXES010000014
//
LOCUS       NZ_JBIHHX010000000   4984021 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E819, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHHX000000000
VERSION     NZ_JBIHHX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235170
            Assembly: GCF_045609765.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4984021)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHHX000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHHX000000000.  This version of the project
            (01) has the accession number NZ_JBIHHX010000000, and consists of
            sequences JBIHHX010000001-JBIHHX010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 322x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045609765.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:28:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,869
            CDSs (total)                      :: 4,751
            Genes (coding)                    :: 4,481
            CDSs (with protein)               :: 4,481
            Genes (RNA)                       :: 118
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 270
            CDSs (without protein)            :: 270
            Pseudo Genes (ambiguous residues) :: 0 of 270
            Pseudo Genes (frameshifted)       :: 135 of 270
            Pseudo Genes (incomplete)         :: 141 of 270
            Pseudo Genes (internal stop)      :: 28 of 270
            Pseudo Genes (multiple problems)  :: 32 of 270
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4984021
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E819"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHHX010000001-JBIHHX010000009
WGS_SCAFLD  NZ_JBIHHX010000001-NZ_JBIHHX010000009
//
LOCUS       NZ_JBIHBO010000000   4917772 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E384, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHBO000000000
VERSION     NZ_JBIHBO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235392
            Assembly: GCF_045585305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4917772)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHBO000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHBO000000000.  This version of the project
            (01) has the accession number NZ_JBIHBO010000000, and consists of
            sequences JBIHBO010000001-JBIHBO010000003.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 674x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045585305.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:28:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,781
            CDSs (total)                      :: 4,661
            Genes (coding)                    :: 4,425
            CDSs (with protein)               :: 4,425
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 236
            CDSs (without protein)            :: 236
            Pseudo Genes (ambiguous residues) :: 0 of 236
            Pseudo Genes (frameshifted)       :: 121 of 236
            Pseudo Genes (incomplete)         :: 112 of 236
            Pseudo Genes (internal stop)      :: 37 of 236
            Pseudo Genes (multiple problems)  :: 32 of 236
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4917772
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E384"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHBO010000001-JBIHBO010000003
WGS_SCAFLD  NZ_JBIHBO010000001-NZ_JBIHBO010000003
//
LOCUS       NZ_JBIXFO010000000   5463570 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1038, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXFO000000000
VERSION     NZ_JBIXFO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247209
            Assembly: GCF_045621785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5463570)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXFO000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXFO000000000.  This version of the project
            (01) has the accession number NZ_JBIXFO010000000, and consists of
            sequences JBIXFO010000001-JBIXFO010000011.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 243x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045621785.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:41:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,352
            CDSs (total)                      :: 5,232
            Genes (coding)                    :: 4,920
            CDSs (with protein)               :: 4,920
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 7, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 87
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 312
            CDSs (without protein)            :: 312
            Pseudo Genes (ambiguous residues) :: 0 of 312
            Pseudo Genes (frameshifted)       :: 172 of 312
            Pseudo Genes (incomplete)         :: 147 of 312
            Pseudo Genes (internal stop)      :: 53 of 312
            Pseudo Genes (multiple problems)  :: 54 of 312
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5463570
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1038"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXFO010000001-JBIXFO010000011
WGS_SCAFLD  NZ_JBIXFO010000001-NZ_JBIXFO010000011
//
LOCUS       NZ_JBJLNW010000000   5386860 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 944575, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLNW000000000
VERSION     NZ_JBJLNW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061626
            Assembly: GCF_045570635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5386860)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5386860)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLNW000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLNW000000000.  This version of the project
            (01) has the accession number NZ_JBJLNW010000000, and consists of
            sequences JBJLNW010000001-JBJLNW010000363.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.31
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045570635.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:17:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,513
            CDSs (total)                      :: 5,425
            Genes (coding)                    :: 5,119
            CDSs (with protein)               :: 5,119
            Genes (RNA)                       :: 88
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 74
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 306
            CDSs (without protein)            :: 306
            Pseudo Genes (ambiguous residues) :: 0 of 306
            Pseudo Genes (frameshifted)       :: 80 of 306
            Pseudo Genes (incomplete)         :: 238 of 306
            Pseudo Genes (internal stop)      :: 32 of 306
            Pseudo Genes (multiple problems)  :: 40 of 306
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5386860
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="944575"
                     /isolation_source="RECTAL SWAB"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-05-25"
                     /collected_by="HUMS"
WGS         JBJLNW010000001-JBJLNW010000363
WGS_SCAFLD  NZ_JBJLNW010000001-NZ_JBJLNW010000363
//
LOCUS       NZ_JBIHDI010000000   4929184 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1006, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHDI000000000
VERSION     NZ_JBIHDI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235329
            Assembly: GCF_045607345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4929184)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHDI000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHDI000000000.  This version of the project
            (01) has the accession number NZ_JBIHDI010000000, and consists of
            sequences JBIHDI010000001-JBIHDI010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 296x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045607345.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:20:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,829
            CDSs (total)                      :: 4,716
            Genes (coding)                    :: 4,353
            CDSs (with protein)               :: 4,353
            Genes (RNA)                       :: 113
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 363
            CDSs (without protein)            :: 363
            Pseudo Genes (ambiguous residues) :: 0 of 363
            Pseudo Genes (frameshifted)       :: 213 of 363
            Pseudo Genes (incomplete)         :: 164 of 363
            Pseudo Genes (internal stop)      :: 47 of 363
            Pseudo Genes (multiple problems)  :: 55 of 363
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4929184
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1006"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHDI010000001-JBIHDI010000005
WGS_SCAFLD  NZ_JBIHDI010000001-NZ_JBIHDI010000005
//
LOCUS       NZ_JBIHKH010000000   5125818 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E720, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHKH000000000
VERSION     NZ_JBIHKH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235086
            Assembly: GCF_045610945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5125818)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHKH000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHKH000000000.  This version of the project
            (01) has the accession number NZ_JBIHKH010000000, and consists of
            sequences JBIHKH010000001-JBIHKH010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 234x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045610945.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:42:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,960
            CDSs (total)                      :: 4,851
            Genes (coding)                    :: 4,621
            CDSs (with protein)               :: 4,621
            Genes (RNA)                       :: 109
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 230
            CDSs (without protein)            :: 230
            Pseudo Genes (ambiguous residues) :: 0 of 230
            Pseudo Genes (frameshifted)       :: 157 of 230
            Pseudo Genes (incomplete)         :: 82 of 230
            Pseudo Genes (internal stop)      :: 21 of 230
            Pseudo Genes (multiple problems)  :: 27 of 230
            Pseudo Genes (short protein)      :: 1 of 230
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5125818
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E720"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHKH010000001-JBIHKH010000006
WGS_SCAFLD  NZ_JBIHKH010000001-NZ_JBIHKH010000006
//
LOCUS       NZ_JBIHDS010000000   5339317 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E990, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHDS000000000
VERSION     NZ_JBIHDS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235317
            Assembly: GCF_045607545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5339317)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHDS000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHDS000000000.  This version of the project
            (01) has the accession number NZ_JBIHDS010000000, and consists of
            sequences JBIHDS010000001-JBIHDS010000012.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 336x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045607545.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:28:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,278
            CDSs (total)                      :: 5,164
            Genes (coding)                    :: 4,849
            CDSs (with protein)               :: 4,849
            Genes (RNA)                       :: 114
            rRNAs                             :: 7, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 7, 6 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 87
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 315
            CDSs (without protein)            :: 315
            Pseudo Genes (ambiguous residues) :: 0 of 315
            Pseudo Genes (frameshifted)       :: 160 of 315
            Pseudo Genes (incomplete)         :: 182 of 315
            Pseudo Genes (internal stop)      :: 41 of 315
            Pseudo Genes (multiple problems)  :: 62 of 315
            Pseudo Genes (short protein)      :: 1 of 315
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5339317
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E990"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHDS010000001-JBIHDS010000012
WGS_SCAFLD  NZ_JBIHDS010000001-NZ_JBIHDS010000012
//
LOCUS       NZ_JBIHEQ010000000   4769172 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E950, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHEQ000000000
VERSION     NZ_JBIHEQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235282
            Assembly: GCF_045608045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4769172)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHEQ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHEQ000000000.  This version of the project
            (01) has the accession number NZ_JBIHEQ010000000, and consists of
            sequences JBIHEQ010000001-JBIHEQ010000002.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 478x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045608045.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:25:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,637
            CDSs (total)                      :: 4,519
            Genes (coding)                    :: 4,375
            CDSs (with protein)               :: 4,375
            Genes (RNA)                       :: 118
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 144
            CDSs (without protein)            :: 144
            Pseudo Genes (ambiguous residues) :: 0 of 144
            Pseudo Genes (frameshifted)       :: 89 of 144
            Pseudo Genes (incomplete)         :: 50 of 144
            Pseudo Genes (internal stop)      :: 24 of 144
            Pseudo Genes (multiple problems)  :: 18 of 144
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4769172
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E950"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHEQ010000001-JBIHEQ010000002
WGS_SCAFLD  NZ_JBIHEQ010000001-NZ_JBIHEQ010000002
//
LOCUS       NZ_JBIWZC010000000   5098064 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1231, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIWZC000000000
VERSION     NZ_JBIWZC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247377
            Assembly: GCF_045618425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5098064)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIWZC000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIWZC000000000.  This version of the project
            (01) has the accession number NZ_JBIWZC010000000, and consists of
            sequences JBIWZC010000001-JBIWZC010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 269x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045618425.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:43:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,025
            CDSs (total)                      :: 4,908
            Genes (coding)                    :: 4,547
            CDSs (with protein)               :: 4,547
            Genes (RNA)                       :: 117
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 361
            CDSs (without protein)            :: 361
            Pseudo Genes (ambiguous residues) :: 0 of 361
            Pseudo Genes (frameshifted)       :: 194 of 361
            Pseudo Genes (incomplete)         :: 181 of 361
            Pseudo Genes (internal stop)      :: 53 of 361
            Pseudo Genes (multiple problems)  :: 59 of 361
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5098064
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1231"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIWZC010000001-JBIWZC010000007
WGS_SCAFLD  NZ_JBIWZC010000001-NZ_JBIWZC010000007
//
LOCUS       NZ_JBIHFQ010000000   5076273 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E906, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHFQ000000000
VERSION     NZ_JBIHFQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235245
            Assembly: GCF_045608545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5076273)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHFQ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHFQ000000000.  This version of the project
            (01) has the accession number NZ_JBIHFQ010000000, and consists of
            sequences JBIHFQ010000001-JBIHFQ010000019.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 101x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045608545.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:28:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,023
            CDSs (total)                      :: 4,903
            Genes (coding)                    :: 4,646
            CDSs (with protein)               :: 4,646
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 8, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 257
            CDSs (without protein)            :: 257
            Pseudo Genes (ambiguous residues) :: 0 of 257
            Pseudo Genes (frameshifted)       :: 159 of 257
            Pseudo Genes (incomplete)         :: 100 of 257
            Pseudo Genes (internal stop)      :: 31 of 257
            Pseudo Genes (multiple problems)  :: 33 of 257
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5076273
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E906"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHFQ010000001-JBIHFQ010000019
WGS_SCAFLD  NZ_JBIHFQ010000001-NZ_JBIHFQ010000019
//
LOCUS       NZ_JBIGMP010000000   5219032 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E321, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGMP000000000
VERSION     NZ_JBIGMP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130648
            Assembly: GCF_045572095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5219032)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGMP000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGMP000000000.  This version of the project
            (01) has the accession number NZ_JBIGMP010000000, and consists of
            sequences JBIGMP010000001-JBIGMP010000010.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 307x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045572095.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:28:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,228
            CDSs (total)                      :: 5,113
            Genes (coding)                    :: 4,778
            CDSs (with protein)               :: 4,778
            Genes (RNA)                       :: 115
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 335
            CDSs (without protein)            :: 335
            Pseudo Genes (ambiguous residues) :: 0 of 335
            Pseudo Genes (frameshifted)       :: 192 of 335
            Pseudo Genes (incomplete)         :: 152 of 335
            Pseudo Genes (internal stop)      :: 50 of 335
            Pseudo Genes (multiple problems)  :: 55 of 335
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5219032
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E321"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGMP010000001-JBIGMP010000010
WGS_SCAFLD  NZ_JBIGMP010000001-NZ_JBIGMP010000010
//
LOCUS       NZ_JBIHGW010000000   5297866 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E861, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHGW000000000
VERSION     NZ_JBIHGW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235205
            Assembly: GCF_045609205.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5297866)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHGW000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHGW000000000.  This version of the project
            (01) has the accession number NZ_JBIHGW010000000, and consists of
            sequences JBIHGW010000001-JBIHGW010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 533x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045609205.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:38:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,117
            CDSs (total)                      :: 4,997
            Genes (coding)                    :: 4,682
            CDSs (with protein)               :: 4,682
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 90
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 315
            CDSs (without protein)            :: 315
            Pseudo Genes (ambiguous residues) :: 0 of 315
            Pseudo Genes (frameshifted)       :: 173 of 315
            Pseudo Genes (incomplete)         :: 172 of 315
            Pseudo Genes (internal stop)      :: 50 of 315
            Pseudo Genes (multiple problems)  :: 70 of 315
            Pseudo Genes (short protein)      :: 1 of 315
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5297866
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E861"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHGW010000001-JBIHGW010000008
WGS_SCAFLD  NZ_JBIHGW010000001-NZ_JBIHGW010000008
//
LOCUS       NZ_JBIGSH010000000   5014362 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E81, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGSH000000000
VERSION     NZ_JBIGSH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130438
            Assembly: GCF_045575085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5014362)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGSH000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGSH000000000.  This version of the project
            (01) has the accession number NZ_JBIGSH010000000, and consists of
            sequences JBIGSH010000001-JBIGSH010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 326x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575085.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:56:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,922
            CDSs (total)                      :: 4,808
            Genes (coding)                    :: 4,613
            CDSs (with protein)               :: 4,613
            Genes (RNA)                       :: 114
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 84
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 195
            CDSs (without protein)            :: 195
            Pseudo Genes (ambiguous residues) :: 0 of 195
            Pseudo Genes (frameshifted)       :: 111 of 195
            Pseudo Genes (incomplete)         :: 108 of 195
            Pseudo Genes (internal stop)      :: 24 of 195
            Pseudo Genes (multiple problems)  :: 42 of 195
            Pseudo Genes (short protein)      :: 1 of 195
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5014362
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E81"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGSH010000001-JBIGSH010000009
WGS_SCAFLD  NZ_JBIGSH010000001-NZ_JBIGSH010000009
//
LOCUS       NZ_JBIGOC010000000   4836322 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E265, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGOC000000000
VERSION     NZ_JBIGOC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130598
            Assembly: GCF_045572895.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4836322)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGOC000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGOC000000000.  This version of the project
            (01) has the accession number NZ_JBIGOC010000000, and consists of
            sequences JBIGOC010000001-JBIGOC010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 173x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045572895.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:36:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,727
            CDSs (total)                      :: 4,605
            Genes (coding)                    :: 4,365
            CDSs (with protein)               :: 4,365
            Genes (RNA)                       :: 122
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 88
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 240
            CDSs (without protein)            :: 240
            Pseudo Genes (ambiguous residues) :: 0 of 240
            Pseudo Genes (frameshifted)       :: 130 of 240
            Pseudo Genes (incomplete)         :: 111 of 240
            Pseudo Genes (internal stop)      :: 43 of 240
            Pseudo Genes (multiple problems)  :: 41 of 240
            Pseudo Genes (short protein)      :: 1 of 240
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4836322
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E265"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGOC010000001-JBIGOC010000008
WGS_SCAFLD  NZ_JBIGOC010000001-NZ_JBIGOC010000008
//
LOCUS       NZ_JBIHIJ010000000   5001935 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E801, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHIJ000000000
VERSION     NZ_JBIHIJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235155
            Assembly: GCF_045609965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5001935)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHIJ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHIJ000000000.  This version of the project
            (01) has the accession number NZ_JBIHIJ010000000, and consists of
            sequences JBIHIJ010000001-JBIHIJ010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 226x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045609965.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:34:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,878
            CDSs (total)                      :: 4,757
            Genes (coding)                    :: 4,501
            CDSs (with protein)               :: 4,501
            Genes (RNA)                       :: 121
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 256
            CDSs (without protein)            :: 256
            Pseudo Genes (ambiguous residues) :: 0 of 256
            Pseudo Genes (frameshifted)       :: 124 of 256
            Pseudo Genes (incomplete)         :: 116 of 256
            Pseudo Genes (internal stop)      :: 47 of 256
            Pseudo Genes (multiple problems)  :: 26 of 256
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5001935
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E801"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHIJ010000001-JBIHIJ010000004
WGS_SCAFLD  NZ_JBIHIJ010000001-NZ_JBIHIJ010000004
//
LOCUS       NZ_JBIGTO010000000   5615412 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E26, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGTO000000000
VERSION     NZ_JBIGTO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130393
            Assembly: GCF_045575735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5615412)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGTO000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGTO000000000.  This version of the project
            (01) has the accession number NZ_JBIGTO010000000, and consists of
            sequences JBIGTO010000001-JBIGTO010000011.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 141x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575735.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:06:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,637
            CDSs (total)                      :: 5,507
            Genes (coding)                    :: 5,123
            CDSs (with protein)               :: 5,123
            Genes (RNA)                       :: 130
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 94
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 384
            CDSs (without protein)            :: 384
            Pseudo Genes (ambiguous residues) :: 0 of 384
            Pseudo Genes (frameshifted)       :: 223 of 384
            Pseudo Genes (incomplete)         :: 191 of 384
            Pseudo Genes (internal stop)      :: 56 of 384
            Pseudo Genes (multiple problems)  :: 76 of 384
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5615412
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E26"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGTO010000001-JBIGTO010000011
WGS_SCAFLD  NZ_JBIGTO010000001-NZ_JBIGTO010000011
//
LOCUS       NZ_JBIHKD010000000   4957402 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E726, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHKD000000000
VERSION     NZ_JBIHKD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235091
            Assembly: GCF_045610885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4957402)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHKD000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHKD000000000.  This version of the project
            (01) has the accession number NZ_JBIHKD010000000, and consists of
            sequences JBIHKD010000001-JBIHKD010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 85x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045610885.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:42:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,916
            CDSs (total)                      :: 4,794
            Genes (coding)                    :: 4,467
            CDSs (with protein)               :: 4,467
            Genes (RNA)                       :: 122
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 173 of 327
            Pseudo Genes (incomplete)         :: 168 of 327
            Pseudo Genes (internal stop)      :: 46 of 327
            Pseudo Genes (multiple problems)  :: 57 of 327
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4957402
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E726"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHKD010000001-JBIHKD010000009
WGS_SCAFLD  NZ_JBIHKD010000001-NZ_JBIHKD010000009
//
LOCUS       NZ_JBIGOR010000000   5164382 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E244, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGOR000000000
VERSION     NZ_JBIGOR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130579
            Assembly: GCF_045573185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5164382)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGOR000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGOR000000000.  This version of the project
            (01) has the accession number NZ_JBIGOR010000000, and consists of
            sequences JBIGOR010000001-JBIGOR010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 160x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045573185.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:42:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,043
            CDSs (total)                      :: 4,921
            Genes (coding)                    :: 4,751
            CDSs (with protein)               :: 4,751
            Genes (RNA)                       :: 122
            rRNAs                             :: 8, 8, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            tRNAs                             :: 90
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 170
            CDSs (without protein)            :: 170
            Pseudo Genes (ambiguous residues) :: 0 of 170
            Pseudo Genes (frameshifted)       :: 100 of 170
            Pseudo Genes (incomplete)         :: 79 of 170
            Pseudo Genes (internal stop)      :: 26 of 170
            Pseudo Genes (multiple problems)  :: 31 of 170
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5164382
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E244"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGOR010000001-JBIGOR010000006
WGS_SCAFLD  NZ_JBIGOR010000001-NZ_JBIGOR010000006
//
LOCUS       NZ_JBIHJJ010000000   4822387 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E757, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHJJ000000000
VERSION     NZ_JBIHJJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235119
            Assembly: GCF_045610485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4822387)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHJJ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHJJ000000000.  This version of the project
            (01) has the accession number NZ_JBIHJJ010000000, and consists of
            sequences JBIHJJ010000001-JBIHJJ010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 249x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045610485.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:33:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,722
            CDSs (total)                      :: 4,600
            Genes (coding)                    :: 4,363
            CDSs (with protein)               :: 4,363
            Genes (RNA)                       :: 122
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 237
            CDSs (without protein)            :: 237
            Pseudo Genes (ambiguous residues) :: 0 of 237
            Pseudo Genes (frameshifted)       :: 111 of 237
            Pseudo Genes (incomplete)         :: 116 of 237
            Pseudo Genes (internal stop)      :: 46 of 237
            Pseudo Genes (multiple problems)  :: 33 of 237
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4822387
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E757"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHJJ010000001-JBIHJJ010000006
WGS_SCAFLD  NZ_JBIHJJ010000001-NZ_JBIHJJ010000006
//
LOCUS       NZ_JBIGPO010000000   5430557 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E191, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGPO000000000
VERSION     NZ_JBIGPO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130537
            Assembly: GCF_045573685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5430557)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGPO000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGPO000000000.  This version of the project
            (01) has the accession number NZ_JBIGPO010000000, and consists of
            sequences JBIGPO010000001-JBIGPO010000017.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 228x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045573685.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:45:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,354
            CDSs (total)                      :: 5,242
            Genes (coding)                    :: 4,918
            CDSs (with protein)               :: 4,918
            Genes (RNA)                       :: 112
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 324
            CDSs (without protein)            :: 324
            Pseudo Genes (ambiguous residues) :: 0 of 324
            Pseudo Genes (frameshifted)       :: 185 of 324
            Pseudo Genes (incomplete)         :: 160 of 324
            Pseudo Genes (internal stop)      :: 31 of 324
            Pseudo Genes (multiple problems)  :: 47 of 324
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5430557
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E191"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGPO010000001-JBIGPO010000017
WGS_SCAFLD  NZ_JBIGPO010000001-NZ_JBIGPO010000017
//
LOCUS       NZ_JBIGWU010000000   5498202 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E580, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGWU000000000
VERSION     NZ_JBIGWU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235564
            Assembly: GCF_045582295.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5498202)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGWU000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGWU000000000.  This version of the project
            (01) has the accession number NZ_JBIGWU010000000, and consists of
            sequences JBIGWU010000001-JBIGWU010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 436x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045582295.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:15:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,541
            CDSs (total)                      :: 5,427
            Genes (coding)                    :: 5,033
            CDSs (with protein)               :: 5,033
            Genes (RNA)                       :: 114
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 394
            CDSs (without protein)            :: 394
            Pseudo Genes (ambiguous residues) :: 0 of 394
            Pseudo Genes (frameshifted)       :: 224 of 394
            Pseudo Genes (incomplete)         :: 209 of 394
            Pseudo Genes (internal stop)      :: 49 of 394
            Pseudo Genes (multiple problems)  :: 76 of 394
            Pseudo Genes (short protein)      :: 1 of 394
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5498202
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E580"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGWU010000001-JBIGWU010000006
WGS_SCAFLD  NZ_JBIGWU010000001-NZ_JBIGWU010000006
//
LOCUS       NZ_JBIHKT010000000   4790584 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E697, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHKT000000000
VERSION     NZ_JBIHKT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235070
            Assembly: GCF_045611205.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4790584)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHKT000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHKT000000000.  This version of the project
            (01) has the accession number NZ_JBIHKT010000000, and consists of
            sequences JBIHKT010000001-JBIHKT010000003.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 304x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045611205.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:40:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,623
            CDSs (total)                      :: 4,504
            Genes (coding)                    :: 4,340
            CDSs (with protein)               :: 4,340
            Genes (RNA)                       :: 119
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 164
            CDSs (without protein)            :: 164
            Pseudo Genes (ambiguous residues) :: 0 of 164
            Pseudo Genes (frameshifted)       :: 75 of 164
            Pseudo Genes (incomplete)         :: 79 of 164
            Pseudo Genes (internal stop)      :: 32 of 164
            Pseudo Genes (multiple problems)  :: 20 of 164
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4790584
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E697"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHKT010000001-JBIHKT010000003
WGS_SCAFLD  NZ_JBIHKT010000001-NZ_JBIHKT010000003
//
LOCUS       NZ_JBIGQT010000000   5090827 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E145, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGQT000000000
VERSION     NZ_JBIGQT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130494
            Assembly: GCF_045574285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5090827)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGQT000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGQT000000000.  This version of the project
            (01) has the accession number NZ_JBIGQT010000000, and consists of
            sequences JBIGQT010000001-JBIGQT010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 253x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045574285.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:44:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,961
            CDSs (total)                      :: 4,845
            Genes (coding)                    :: 4,610
            CDSs (with protein)               :: 4,610
            Genes (RNA)                       :: 116
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 235
            CDSs (without protein)            :: 235
            Pseudo Genes (ambiguous residues) :: 0 of 235
            Pseudo Genes (frameshifted)       :: 126 of 235
            Pseudo Genes (incomplete)         :: 120 of 235
            Pseudo Genes (internal stop)      :: 39 of 235
            Pseudo Genes (multiple problems)  :: 47 of 235
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5090827
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E145"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGQT010000001-JBIGQT010000004
WGS_SCAFLD  NZ_JBIGQT010000001-NZ_JBIGQT010000004
//
LOCUS       NZ_JBIGZK010000000   5119056 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E475, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGZK000000000
VERSION     NZ_JBIGZK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235471
            Assembly: GCF_045583705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5119056)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGZK000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGZK000000000.  This version of the project
            (01) has the accession number NZ_JBIGZK010000000, and consists of
            sequences JBIGZK010000001-JBIGZK010000003.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 254x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045583705.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:19:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,966
            CDSs (total)                      :: 4,852
            Genes (coding)                    :: 4,652
            CDSs (with protein)               :: 4,652
            Genes (RNA)                       :: 114
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 200
            CDSs (without protein)            :: 200
            Pseudo Genes (ambiguous residues) :: 0 of 200
            Pseudo Genes (frameshifted)       :: 103 of 200
            Pseudo Genes (incomplete)         :: 113 of 200
            Pseudo Genes (internal stop)      :: 22 of 200
            Pseudo Genes (multiple problems)  :: 33 of 200
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5119056
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E475"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGZK010000001-JBIGZK010000003
WGS_SCAFLD  NZ_JBIGZK010000001-NZ_JBIGZK010000003
//
LOCUS       NZ_JBIXAK010000000   5483241 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1191, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXAK000000000
VERSION     NZ_JBIXAK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247343
            Assembly: GCF_045619065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5483241)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXAK000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXAK000000000.  This version of the project
            (01) has the accession number NZ_JBIXAK010000000, and consists of
            sequences JBIXAK010000001-JBIXAK010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 366x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045619065.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:46:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,359
            CDSs (total)                      :: 5,237
            Genes (coding)                    :: 4,914
            CDSs (with protein)               :: 4,914
            Genes (RNA)                       :: 122
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 323
            CDSs (without protein)            :: 323
            Pseudo Genes (ambiguous residues) :: 0 of 323
            Pseudo Genes (frameshifted)       :: 172 of 323
            Pseudo Genes (incomplete)         :: 167 of 323
            Pseudo Genes (internal stop)      :: 39 of 323
            Pseudo Genes (multiple problems)  :: 50 of 323
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5483241
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1191"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXAK010000001-JBIXAK010000006
WGS_SCAFLD  NZ_JBIXAK010000001-NZ_JBIXAK010000006
//
LOCUS       NZ_JBIGRP010000000   4932088 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E108, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGRP000000000
VERSION     NZ_JBIGRP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130461
            Assembly: GCF_045574675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4932088)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGRP000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGRP000000000.  This version of the project
            (01) has the accession number NZ_JBIGRP010000000, and consists of
            sequences JBIGRP010000001-JBIGRP010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 345x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045574675.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:32:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,859
            CDSs (total)                      :: 4,739
            Genes (coding)                    :: 4,432
            CDSs (with protein)               :: 4,432
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 307
            CDSs (without protein)            :: 307
            Pseudo Genes (ambiguous residues) :: 0 of 307
            Pseudo Genes (frameshifted)       :: 143 of 307
            Pseudo Genes (incomplete)         :: 164 of 307
            Pseudo Genes (internal stop)      :: 50 of 307
            Pseudo Genes (multiple problems)  :: 42 of 307
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4932088
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E108"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGRP010000001-JBIGRP010000007
WGS_SCAFLD  NZ_JBIGRP010000001-NZ_JBIGRP010000007
//
LOCUS       NZ_JBIGWV010000000   5133760 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E575, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGWV000000000
VERSION     NZ_JBIGWV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235559
            Assembly: GCF_045582325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5133760)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGWV000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGWV000000000.  This version of the project
            (01) has the accession number NZ_JBIGWV010000000, and consists of
            sequences JBIGWV010000001-JBIGWV010000013.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 130x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045582325.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:11:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,093
            CDSs (total)                      :: 4,977
            Genes (coding)                    :: 4,719
            CDSs (with protein)               :: 4,719
            Genes (RNA)                       :: 116
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 258
            CDSs (without protein)            :: 258
            Pseudo Genes (ambiguous residues) :: 0 of 258
            Pseudo Genes (frameshifted)       :: 97 of 258
            Pseudo Genes (incomplete)         :: 149 of 258
            Pseudo Genes (internal stop)      :: 42 of 258
            Pseudo Genes (multiple problems)  :: 28 of 258
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5133760
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E575"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGWV010000001-JBIGWV010000013
WGS_SCAFLD  NZ_JBIGWV010000001-NZ_JBIGWV010000013
//
LOCUS       NZ_JBIXCR010000000   5055380 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1123, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXCR000000000
VERSION     NZ_JBIXCR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247284
            Assembly: GCF_045620325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5055380)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXCR000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXCR000000000.  This version of the project
            (01) has the accession number NZ_JBIXCR010000000, and consists of
            sequences JBIXCR010000001-JBIXCR010000011.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 412x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045620325.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:46:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,884
            CDSs (total)                      :: 4,760
            Genes (coding)                    :: 4,560
            CDSs (with protein)               :: 4,560
            Genes (RNA)                       :: 124
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 88
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 200
            CDSs (without protein)            :: 200
            Pseudo Genes (ambiguous residues) :: 0 of 200
            Pseudo Genes (frameshifted)       :: 109 of 200
            Pseudo Genes (incomplete)         :: 100 of 200
            Pseudo Genes (internal stop)      :: 29 of 200
            Pseudo Genes (multiple problems)  :: 37 of 200
            Pseudo Genes (short protein)      :: 1 of 200
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5055380
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1123"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXCR010000001-JBIXCR010000011
WGS_SCAFLD  NZ_JBIXCR010000001-NZ_JBIXCR010000011
//
LOCUS       NZ_JBIGXZ010000000   5010752 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E531, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGXZ000000000
VERSION     NZ_JBIGXZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235519
            Assembly: GCF_045582885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5010752)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGXZ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGXZ000000000.  This version of the project
            (01) has the accession number NZ_JBIGXZ010000000, and consists of
            sequences JBIGXZ010000001-JBIGXZ010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 147x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045582885.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:15:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,897
            CDSs (total)                      :: 4,779
            Genes (coding)                    :: 4,636
            CDSs (with protein)               :: 4,636
            Genes (RNA)                       :: 118
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 143
            CDSs (without protein)            :: 143
            Pseudo Genes (ambiguous residues) :: 0 of 143
            Pseudo Genes (frameshifted)       :: 69 of 143
            Pseudo Genes (incomplete)         :: 68 of 143
            Pseudo Genes (internal stop)      :: 28 of 143
            Pseudo Genes (multiple problems)  :: 22 of 143
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5010752
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E531"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGXZ010000001-JBIGXZ010000004
WGS_SCAFLD  NZ_JBIGXZ010000001-NZ_JBIGXZ010000004
//
LOCUS       NZ_JBIGZV010000000   5153062 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E455, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGZV000000000
VERSION     NZ_JBIGZV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235454
            Assembly: GCF_045583995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5153062)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGZV000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGZV000000000.  This version of the project
            (01) has the accession number NZ_JBIGZV010000000, and consists of
            sequences JBIGZV010000001-JBIGZV010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 93x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045583995.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:21:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,082
            CDSs (total)                      :: 4,959
            Genes (coding)                    :: 4,769
            CDSs (with protein)               :: 4,769
            Genes (RNA)                       :: 123
            rRNAs                             :: 8, 8, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            tRNAs                             :: 90
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 190
            CDSs (without protein)            :: 190
            Pseudo Genes (ambiguous residues) :: 0 of 190
            Pseudo Genes (frameshifted)       :: 94 of 190
            Pseudo Genes (incomplete)         :: 100 of 190
            Pseudo Genes (internal stop)      :: 22 of 190
            Pseudo Genes (multiple problems)  :: 23 of 190
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5153062
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E455"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGZV010000001-JBIGZV010000007
WGS_SCAFLD  NZ_JBIGZV010000001-NZ_JBIGZV010000007
//
LOCUS       NZ_JBIHBA010000000   5302194 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E406, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHBA000000000
VERSION     NZ_JBIHBA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235410
            Assembly: GCF_045585035.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5302194)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHBA000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHBA000000000.  This version of the project
            (01) has the accession number NZ_JBIHBA010000000, and consists of
            sequences JBIHBA010000001-JBIHBA010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 615x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045585035.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:20:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,276
            CDSs (total)                      :: 5,165
            Genes (coding)                    :: 4,863
            CDSs (with protein)               :: 4,863
            Genes (RNA)                       :: 111
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 302
            CDSs (without protein)            :: 302
            Pseudo Genes (ambiguous residues) :: 0 of 302
            Pseudo Genes (frameshifted)       :: 155 of 302
            Pseudo Genes (incomplete)         :: 167 of 302
            Pseudo Genes (internal stop)      :: 43 of 302
            Pseudo Genes (multiple problems)  :: 54 of 302
            Pseudo Genes (short protein)      :: 1 of 302
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5302194
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E406"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHBA010000001-JBIHBA010000004
WGS_SCAFLD  NZ_JBIHBA010000001-NZ_JBIHBA010000004
//
LOCUS       NZ_JBIGSI010000000   5288170 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E80, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGSI000000000
VERSION     NZ_JBIGSI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130437
            Assembly: GCF_045575105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5288170)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGSI000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGSI000000000.  This version of the project
            (01) has the accession number NZ_JBIGSI010000000, and consists of
            sequences JBIGSI010000001-JBIGSI010000010.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 225x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575105.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:57:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,307
            CDSs (total)                      :: 5,195
            Genes (coding)                    :: 4,908
            CDSs (with protein)               :: 4,908
            Genes (RNA)                       :: 112
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 287
            CDSs (without protein)            :: 287
            Pseudo Genes (ambiguous residues) :: 0 of 287
            Pseudo Genes (frameshifted)       :: 139 of 287
            Pseudo Genes (incomplete)         :: 174 of 287
            Pseudo Genes (internal stop)      :: 32 of 287
            Pseudo Genes (multiple problems)  :: 52 of 287
            Pseudo Genes (short protein)      :: 1 of 287
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5288170
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E80"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGSI010000001-JBIGSI010000010
WGS_SCAFLD  NZ_JBIGSI010000001-NZ_JBIGSI010000010
//
LOCUS       NZ_JBIGSR010000000   5205426 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E65, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGSR000000000
VERSION     NZ_JBIGSR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130423
            Assembly: GCF_045575265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5205426)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGSR000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGSR000000000.  This version of the project
            (01) has the accession number NZ_JBIGSR010000000, and consists of
            sequences JBIGSR010000001-JBIGSR010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 148x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575265.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:53:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,153
            CDSs (total)                      :: 5,039
            Genes (coding)                    :: 4,755
            CDSs (with protein)               :: 4,755
            Genes (RNA)                       :: 114
            rRNAs                             :: 8, 8, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 284
            CDSs (without protein)            :: 284
            Pseudo Genes (ambiguous residues) :: 0 of 284
            Pseudo Genes (frameshifted)       :: 135 of 284
            Pseudo Genes (incomplete)         :: 177 of 284
            Pseudo Genes (internal stop)      :: 34 of 284
            Pseudo Genes (multiple problems)  :: 55 of 284
            Pseudo Genes (short protein)      :: 1 of 284
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5205426
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E65"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGSR010000001-JBIGSR010000006
WGS_SCAFLD  NZ_JBIGSR010000001-NZ_JBIGSR010000006
//
LOCUS       NZ_JBIGTD010000000   5360664 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E47, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGTD000000000
VERSION     NZ_JBIGTD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130409
            Assembly: GCF_045575595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5360664)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGTD000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGTD000000000.  This version of the project
            (01) has the accession number NZ_JBIGTD010000000, and consists of
            sequences JBIGTD010000001-JBIGTD010000010.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 294x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575595.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:00:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,307
            CDSs (total)                      :: 5,189
            Genes (coding)                    :: 4,879
            CDSs (with protein)               :: 4,879
            Genes (RNA)                       :: 118
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 90
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 310
            CDSs (without protein)            :: 310
            Pseudo Genes (ambiguous residues) :: 0 of 310
            Pseudo Genes (frameshifted)       :: 171 of 310
            Pseudo Genes (incomplete)         :: 168 of 310
            Pseudo Genes (internal stop)      :: 39 of 310
            Pseudo Genes (multiple problems)  :: 62 of 310
            Pseudo Genes (short protein)      :: 1 of 310
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5360664
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E47"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGTD010000001-JBIGTD010000010
WGS_SCAFLD  NZ_JBIGTD010000001-NZ_JBIGTD010000010
//
LOCUS       NZ_JBIGUY010000000   5009117 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E641, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGUY000000000
VERSION     NZ_JBIGUY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235619
            Assembly: GCF_045581395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5009117)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGUY000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGUY000000000.  This version of the project
            (01) has the accession number NZ_JBIGUY010000000, and consists of
            sequences JBIGUY010000001-JBIGUY010000010.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 186x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045581395.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:06:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,959
            CDSs (total)                      :: 4,835
            Genes (coding)                    :: 4,587
            CDSs (with protein)               :: 4,587
            Genes (RNA)                       :: 124
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 91
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 248
            CDSs (without protein)            :: 248
            Pseudo Genes (ambiguous residues) :: 0 of 248
            Pseudo Genes (frameshifted)       :: 102 of 248
            Pseudo Genes (incomplete)         :: 143 of 248
            Pseudo Genes (internal stop)      :: 35 of 248
            Pseudo Genes (multiple problems)  :: 28 of 248
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5009117
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E641"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGUY010000001-JBIGUY010000010
WGS_SCAFLD  NZ_JBIGUY010000001-NZ_JBIGUY010000010
//
LOCUS       NZ_JBIHCQ010000000   5646583 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1031, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHCQ000000000
VERSION     NZ_JBIHCQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235351
            Assembly: GCF_045606985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5646583)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHCQ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHCQ000000000.  This version of the project
            (01) has the accession number NZ_JBIHCQ010000000, and consists of
            sequences JBIHCQ010000001-JBIHCQ010000015.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 108x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045606985.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:32:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,605
            CDSs (total)                      :: 5,482
            Genes (coding)                    :: 5,103
            CDSs (with protein)               :: 5,103
            Genes (RNA)                       :: 123
            rRNAs                             :: 7, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 7, 6 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 88
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 379
            CDSs (without protein)            :: 379
            Pseudo Genes (ambiguous residues) :: 0 of 379
            Pseudo Genes (frameshifted)       :: 211 of 379
            Pseudo Genes (incomplete)         :: 191 of 379
            Pseudo Genes (internal stop)      :: 45 of 379
            Pseudo Genes (multiple problems)  :: 61 of 379
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5646583
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1031"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHCQ010000001-JBIHCQ010000015
WGS_SCAFLD  NZ_JBIHCQ010000001-NZ_JBIHCQ010000015
//
LOCUS       NZ_JBIGVV010000000   5478264 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E616, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGVV000000000
VERSION     NZ_JBIGVV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235595
            Assembly: GCF_045581845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5478264)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGVV000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGVV000000000.  This version of the project
            (01) has the accession number NZ_JBIGVV010000000, and consists of
            sequences JBIGVV010000001-JBIGVV010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 161x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045581845.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:09:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,499
            CDSs (total)                      :: 5,388
            Genes (coding)                    :: 5,003
            CDSs (with protein)               :: 5,003
            Genes (RNA)                       :: 111
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 385
            CDSs (without protein)            :: 385
            Pseudo Genes (ambiguous residues) :: 0 of 385
            Pseudo Genes (frameshifted)       :: 218 of 385
            Pseudo Genes (incomplete)         :: 209 of 385
            Pseudo Genes (internal stop)      :: 49 of 385
            Pseudo Genes (multiple problems)  :: 78 of 385
            Pseudo Genes (short protein)      :: 1 of 385
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5478264
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E616"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGVV010000001-JBIGVV010000008
WGS_SCAFLD  NZ_JBIGVV010000001-NZ_JBIGVV010000008
//
LOCUS       NZ_JBIHFL010000000   5457603 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E912, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHFL000000000
VERSION     NZ_JBIHFL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235250
            Assembly: GCF_045608435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5457603)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHFL000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHFL000000000.  This version of the project
            (01) has the accession number NZ_JBIHFL010000000, and consists of
            sequences JBIHFL010000001-JBIHFL010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 138x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045608435.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:35:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,504
            CDSs (total)                      :: 5,399
            Genes (coding)                    :: 5,008
            CDSs (with protein)               :: 5,008
            Genes (RNA)                       :: 105
            rRNAs                             :: 6, 6, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 81
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 391
            CDSs (without protein)            :: 391
            Pseudo Genes (ambiguous residues) :: 0 of 391
            Pseudo Genes (frameshifted)       :: 220 of 391
            Pseudo Genes (incomplete)         :: 211 of 391
            Pseudo Genes (internal stop)      :: 54 of 391
            Pseudo Genes (multiple problems)  :: 82 of 391
            Pseudo Genes (short protein)      :: 1 of 391
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5457603
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E912"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHFL010000001-JBIHFL010000004
WGS_SCAFLD  NZ_JBIHFL010000001-NZ_JBIHFL010000004
//
LOCUS       NZ_JBIHJG010000000   5172790 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E763, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHJG000000000
VERSION     NZ_JBIHJG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235123
            Assembly: GCF_045610465.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5172790)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHJG000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHJG000000000.  This version of the project
            (01) has the accession number NZ_JBIHJG010000000, and consists of
            sequences JBIHJG010000001-JBIHJG010000010.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 265x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045610465.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:35:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,097
            CDSs (total)                      :: 4,979
            Genes (coding)                    :: 4,630
            CDSs (with protein)               :: 4,630
            Genes (RNA)                       :: 118
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 349
            CDSs (without protein)            :: 349
            Pseudo Genes (ambiguous residues) :: 0 of 349
            Pseudo Genes (frameshifted)       :: 187 of 349
            Pseudo Genes (incomplete)         :: 180 of 349
            Pseudo Genes (internal stop)      :: 49 of 349
            Pseudo Genes (multiple problems)  :: 63 of 349
            Pseudo Genes (short protein)      :: 1 of 349
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5172790
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E763"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHJG010000001-JBIHJG010000010
WGS_SCAFLD  NZ_JBIHJG010000001-NZ_JBIHJG010000010
//
LOCUS       NZ_JBIGWZ010000000   5476331 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E570, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGWZ000000000
VERSION     NZ_JBIGWZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235554
            Assembly: GCF_045582425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5476331)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGWZ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGWZ000000000.  This version of the project
            (01) has the accession number NZ_JBIGWZ010000000, and consists of
            sequences JBIGWZ010000001-JBIGWZ010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 404x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045582425.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:20:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,516
            CDSs (total)                      :: 5,408
            Genes (coding)                    :: 5,034
            CDSs (with protein)               :: 5,034
            Genes (RNA)                       :: 108
            rRNAs                             :: 7, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 374
            CDSs (without protein)            :: 374
            Pseudo Genes (ambiguous residues) :: 0 of 374
            Pseudo Genes (frameshifted)       :: 214 of 374
            Pseudo Genes (incomplete)         :: 199 of 374
            Pseudo Genes (internal stop)      :: 43 of 374
            Pseudo Genes (multiple problems)  :: 73 of 374
            Pseudo Genes (short protein)      :: 1 of 374
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5476331
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E570"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGWZ010000001-JBIGWZ010000007
WGS_SCAFLD  NZ_JBIGWZ010000001-NZ_JBIGWZ010000007
//
LOCUS       NZ_JBIHGV010000000   5219540 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E862, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHGV000000000
VERSION     NZ_JBIHGV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235206
            Assembly: GCF_045609145.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5219540)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHGV000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHGV000000000.  This version of the project
            (01) has the accession number NZ_JBIHGV010000000, and consists of
            sequences JBIHGV010000001-JBIHGV010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 337x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045609145.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:34:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,095
            CDSs (total)                      :: 4,975
            Genes (coding)                    :: 4,646
            CDSs (with protein)               :: 4,646
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 90
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 329
            CDSs (without protein)            :: 329
            Pseudo Genes (ambiguous residues) :: 0 of 329
            Pseudo Genes (frameshifted)       :: 182 of 329
            Pseudo Genes (incomplete)         :: 178 of 329
            Pseudo Genes (internal stop)      :: 52 of 329
            Pseudo Genes (multiple problems)  :: 73 of 329
            Pseudo Genes (short protein)      :: 1 of 329
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5219540
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E862"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHGV010000001-JBIHGV010000005
WGS_SCAFLD  NZ_JBIHGV010000001-NZ_JBIHGV010000005
//
LOCUS       NZ_JBIHJO010000000   5301144 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E747, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHJO000000000
VERSION     NZ_JBIHJO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235111
            Assembly: GCF_045610585.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5301144)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHJO000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHJO000000000.  This version of the project
            (01) has the accession number NZ_JBIHJO010000000, and consists of
            sequences JBIHJO010000001-JBIHJO010000002.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 365x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045610585.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:35:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,266
            CDSs (total)                      :: 5,148
            Genes (coding)                    :: 4,863
            CDSs (with protein)               :: 4,863
            Genes (RNA)                       :: 118
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 285
            CDSs (without protein)            :: 285
            Pseudo Genes (ambiguous residues) :: 0 of 285
            Pseudo Genes (frameshifted)       :: 187 of 285
            Pseudo Genes (incomplete)         :: 108 of 285
            Pseudo Genes (internal stop)      :: 33 of 285
            Pseudo Genes (multiple problems)  :: 42 of 285
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5301144
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E747"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHJO010000001-JBIHJO010000002
WGS_SCAFLD  NZ_JBIHJO010000001-NZ_JBIHJO010000002
//
LOCUS       NZ_JBIHJI010000000   4812615 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E758, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHJI000000000
VERSION     NZ_JBIHJI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235120
            Assembly: GCF_045610425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4812615)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHJI000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHJI000000000.  This version of the project
            (01) has the accession number NZ_JBIHJI010000000, and consists of
            sequences JBIHJI010000001-JBIHJI010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 756x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045610425.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:35:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,716
            CDSs (total)                      :: 4,598
            Genes (coding)                    :: 4,343
            CDSs (with protein)               :: 4,343
            Genes (RNA)                       :: 118
            rRNAs                             :: 7, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 7, 6 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 85
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 255
            CDSs (without protein)            :: 255
            Pseudo Genes (ambiguous residues) :: 0 of 255
            Pseudo Genes (frameshifted)       :: 125 of 255
            Pseudo Genes (incomplete)         :: 116 of 255
            Pseudo Genes (internal stop)      :: 48 of 255
            Pseudo Genes (multiple problems)  :: 32 of 255
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4812615
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E758"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHJI010000001-JBIHJI010000005
WGS_SCAFLD  NZ_JBIHJI010000001-NZ_JBIHJI010000005
//
LOCUS       NZ_JBIGXQ010000000   5272461 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E545, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGXQ000000000
VERSION     NZ_JBIGXQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235532
            Assembly: GCF_045582725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5272461)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGXQ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGXQ000000000.  This version of the project
            (01) has the accession number NZ_JBIGXQ010000000, and consists of
            sequences JBIGXQ010000001-JBIGXQ010000014.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 367x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045582725.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:16:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,239
            CDSs (total)                      :: 5,128
            Genes (coding)                    :: 4,829
            CDSs (with protein)               :: 4,829
            Genes (RNA)                       :: 111
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 5 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 87
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 299
            CDSs (without protein)            :: 299
            Pseudo Genes (ambiguous residues) :: 0 of 299
            Pseudo Genes (frameshifted)       :: 160 of 299
            Pseudo Genes (incomplete)         :: 159 of 299
            Pseudo Genes (internal stop)      :: 35 of 299
            Pseudo Genes (multiple problems)  :: 51 of 299
            Pseudo Genes (short protein)      :: 1 of 299
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5272461
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E545"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGXQ010000001-JBIGXQ010000014
WGS_SCAFLD  NZ_JBIGXQ010000001-NZ_JBIGXQ010000014
//
LOCUS       NZ_JBIHJR010000000   4734288 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E739, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHJR000000000
VERSION     NZ_JBIHJR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235104
            Assembly: GCF_045610645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4734288)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHJR000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHJR000000000.  This version of the project
            (01) has the accession number NZ_JBIHJR010000000, and consists of
            sequences JBIHJR010000001-JBIHJR010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 399x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045610645.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:38:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,716
            CDSs (total)                      :: 4,593
            Genes (coding)                    :: 4,250
            CDSs (with protein)               :: 4,250
            Genes (RNA)                       :: 123
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 90
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 343
            CDSs (without protein)            :: 343
            Pseudo Genes (ambiguous residues) :: 0 of 343
            Pseudo Genes (frameshifted)       :: 149 of 343
            Pseudo Genes (incomplete)         :: 185 of 343
            Pseudo Genes (internal stop)      :: 48 of 343
            Pseudo Genes (multiple problems)  :: 40 of 343
            Pseudo Genes (short protein)      :: 1 of 343
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4734288
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E739"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHJR010000001-JBIHJR010000005
WGS_SCAFLD  NZ_JBIHJR010000001-NZ_JBIHJR010000005
//
LOCUS       NZ_JBIGZI010000000   5085413 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E478, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGZI000000000
VERSION     NZ_JBIGZI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235474
            Assembly: GCF_045583645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5085413)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGZI000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGZI000000000.  This version of the project
            (01) has the accession number NZ_JBIGZI010000000, and consists of
            sequences JBIGZI010000001-JBIGZI010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 681x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045583645.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:20:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,957
            CDSs (total)                      :: 4,836
            Genes (coding)                    :: 4,594
            CDSs (with protein)               :: 4,594
            Genes (RNA)                       :: 121
            rRNAs                             :: 8, 8, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 242
            CDSs (without protein)            :: 242
            Pseudo Genes (ambiguous residues) :: 0 of 242
            Pseudo Genes (frameshifted)       :: 136 of 242
            Pseudo Genes (incomplete)         :: 116 of 242
            Pseudo Genes (internal stop)      :: 39 of 242
            Pseudo Genes (multiple problems)  :: 46 of 242
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5085413
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E478"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGZI010000001-JBIGZI010000006
WGS_SCAFLD  NZ_JBIGZI010000001-NZ_JBIGZI010000006
//
LOCUS       NZ_JBIHKM010000000   5429610 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E707, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHKM000000000
VERSION     NZ_JBIHKM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235078
            Assembly: GCF_045610985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5429610)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHKM000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHKM000000000.  This version of the project
            (01) has the accession number NZ_JBIHKM010000000, and consists of
            sequences JBIHKM010000001-JBIHKM010000013.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 489x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045610985.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:32:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,469
            CDSs (total)                      :: 5,347
            Genes (coding)                    :: 5,082
            CDSs (with protein)               :: 5,082
            Genes (RNA)                       :: 122
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 90
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 265
            CDSs (without protein)            :: 265
            Pseudo Genes (ambiguous residues) :: 0 of 265
            Pseudo Genes (frameshifted)       :: 137 of 265
            Pseudo Genes (incomplete)         :: 140 of 265
            Pseudo Genes (internal stop)      :: 25 of 265
            Pseudo Genes (multiple problems)  :: 34 of 265
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5429610
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E707"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHKM010000001-JBIHKM010000013
WGS_SCAFLD  NZ_JBIHKM010000001-NZ_JBIHKM010000013
//
LOCUS       NZ_JBIHAQ010000000   5184779 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E418, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHAQ000000000
VERSION     NZ_JBIHAQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235421
            Assembly: GCF_045584855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5184779)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHAQ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHAQ000000000.  This version of the project
            (01) has the accession number NZ_JBIHAQ010000000, and consists of
            sequences JBIHAQ010000001-JBIHAQ010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 259x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045584855.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:22:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,111
            CDSs (total)                      :: 4,988
            Genes (coding)                    :: 4,663
            CDSs (with protein)               :: 4,663
            Genes (RNA)                       :: 123
            rRNAs                             :: 8, 8, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 325
            CDSs (without protein)            :: 325
            Pseudo Genes (ambiguous residues) :: 0 of 325
            Pseudo Genes (frameshifted)       :: 145 of 325
            Pseudo Genes (incomplete)         :: 185 of 325
            Pseudo Genes (internal stop)      :: 54 of 325
            Pseudo Genes (multiple problems)  :: 51 of 325
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5184779
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E418"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHAQ010000001-JBIHAQ010000009
WGS_SCAFLD  NZ_JBIHAQ010000001-NZ_JBIHAQ010000009
//
LOCUS       NZ_JBIWZY010000000   5577659 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1205, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIWZY000000000
VERSION     NZ_JBIWZY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247355
            Assembly: GCF_045618865.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5577659)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIWZY000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIWZY000000000.  This version of the project
            (01) has the accession number NZ_JBIWZY010000000, and consists of
            sequences JBIWZY010000001-JBIWZY010000010.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 307x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045618865.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:54:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,559
            CDSs (total)                      :: 5,435
            Genes (coding)                    :: 5,076
            CDSs (with protein)               :: 5,076
            Genes (RNA)                       :: 124
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 359
            CDSs (without protein)            :: 359
            Pseudo Genes (ambiguous residues) :: 0 of 359
            Pseudo Genes (frameshifted)       :: 208 of 359
            Pseudo Genes (incomplete)         :: 166 of 359
            Pseudo Genes (internal stop)      :: 60 of 359
            Pseudo Genes (multiple problems)  :: 68 of 359
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5577659
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1205"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIWZY010000001-JBIWZY010000010
WGS_SCAFLD  NZ_JBIWZY010000001-NZ_JBIWZY010000010
//
LOCUS       NZ_JBIHKK010000000   5120894 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E716, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHKK000000000
VERSION     NZ_JBIHKK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235082
            Assembly: GCF_045611045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5120894)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHKK000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHKK000000000.  This version of the project
            (01) has the accession number NZ_JBIHKK010000000, and consists of
            sequences JBIHKK010000001-JBIHKK010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 302x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045611045.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:45:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,949
            CDSs (total)                      :: 4,834
            Genes (coding)                    :: 4,670
            CDSs (with protein)               :: 4,670
            Genes (RNA)                       :: 115
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 164
            CDSs (without protein)            :: 164
            Pseudo Genes (ambiguous residues) :: 0 of 164
            Pseudo Genes (frameshifted)       :: 90 of 164
            Pseudo Genes (incomplete)         :: 77 of 164
            Pseudo Genes (internal stop)      :: 20 of 164
            Pseudo Genes (multiple problems)  :: 20 of 164
            Pseudo Genes (short protein)      :: 1 of 164
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5120894
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E716"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHKK010000001-JBIHKK010000005
WGS_SCAFLD  NZ_JBIHKK010000001-NZ_JBIHKK010000005
//
LOCUS       NZ_JBIHBN010000000   5435844 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E385, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHBN000000000
VERSION     NZ_JBIHBN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235393
            Assembly: GCF_045585295.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5435844)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHBN000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHBN000000000.  This version of the project
            (01) has the accession number NZ_JBIHBN010000000, and consists of
            sequences JBIHBN010000001-JBIHBN010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 118x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045585295.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:26:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,467
            CDSs (total)                      :: 5,349
            Genes (coding)                    :: 4,917
            CDSs (with protein)               :: 4,917
            Genes (RNA)                       :: 118
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 432
            CDSs (without protein)            :: 432
            Pseudo Genes (ambiguous residues) :: 0 of 432
            Pseudo Genes (frameshifted)       :: 245 of 432
            Pseudo Genes (incomplete)         :: 206 of 432
            Pseudo Genes (internal stop)      :: 59 of 432
            Pseudo Genes (multiple problems)  :: 71 of 432
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5435844
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E385"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHBN010000001-JBIHBN010000009
WGS_SCAFLD  NZ_JBIHBN010000001-NZ_JBIHBN010000009
//
LOCUS       NZ_JBIWZO010000000   5121771 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1217, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIWZO000000000
VERSION     NZ_JBIWZO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247365
            Assembly: GCF_045618665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5121771)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIWZO000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIWZO000000000.  This version of the project
            (01) has the accession number NZ_JBIWZO010000000, and consists of
            sequences JBIWZO010000001-JBIWZO010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 331x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045618665.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:36:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,069
            CDSs (total)                      :: 4,945
            Genes (coding)                    :: 4,672
            CDSs (with protein)               :: 4,672
            Genes (RNA)                       :: 124
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 93
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 273
            CDSs (without protein)            :: 273
            Pseudo Genes (ambiguous residues) :: 0 of 273
            Pseudo Genes (frameshifted)       :: 148 of 273
            Pseudo Genes (incomplete)         :: 120 of 273
            Pseudo Genes (internal stop)      :: 46 of 273
            Pseudo Genes (multiple problems)  :: 38 of 273
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5121771
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1217"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIWZO010000001-JBIWZO010000009
WGS_SCAFLD  NZ_JBIWZO010000001-NZ_JBIWZO010000009
//
LOCUS       NZ_JBIHEI010000000   4878916 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E965, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHEI000000000
VERSION     NZ_JBIHEI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235295
            Assembly: GCF_045607865.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4878916)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHEI000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHEI000000000.  This version of the project
            (01) has the accession number NZ_JBIHEI010000000, and consists of
            sequences JBIHEI010000001-JBIHEI010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 246x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045607865.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:25:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,897
            CDSs (total)                      :: 4,773
            Genes (coding)                    :: 4,508
            CDSs (with protein)               :: 4,508
            Genes (RNA)                       :: 124
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 15
            Pseudo Genes (total)              :: 265
            CDSs (without protein)            :: 265
            Pseudo Genes (ambiguous residues) :: 0 of 265
            Pseudo Genes (frameshifted)       :: 114 of 265
            Pseudo Genes (incomplete)         :: 138 of 265
            Pseudo Genes (internal stop)      :: 36 of 265
            Pseudo Genes (multiple problems)  :: 20 of 265
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4878916
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E965"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHEI010000001-JBIHEI010000009
WGS_SCAFLD  NZ_JBIHEI010000001-NZ_JBIHEI010000009
//
LOCUS       NZ_JBIXAI010000000   5505295 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1193, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXAI000000000
VERSION     NZ_JBIXAI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247345
            Assembly: GCF_045619125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5505295)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXAI000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXAI000000000.  This version of the project
            (01) has the accession number NZ_JBIXAI010000000, and consists of
            sequences JBIXAI010000001-JBIXAI010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 316x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045619125.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:40:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,486
            CDSs (total)                      :: 5,371
            Genes (coding)                    :: 5,067
            CDSs (with protein)               :: 5,067
            Genes (RNA)                       :: 115
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 304
            CDSs (without protein)            :: 304
            Pseudo Genes (ambiguous residues) :: 0 of 304
            Pseudo Genes (frameshifted)       :: 147 of 304
            Pseudo Genes (incomplete)         :: 188 of 304
            Pseudo Genes (internal stop)      :: 42 of 304
            Pseudo Genes (multiple problems)  :: 65 of 304
            Pseudo Genes (short protein)      :: 1 of 304
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5505295
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1193"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXAI010000001-JBIXAI010000008
WGS_SCAFLD  NZ_JBIXAI010000001-NZ_JBIXAI010000008
//
LOCUS       NZ_JBIHGD010000000   5034028 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E885, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHGD000000000
VERSION     NZ_JBIHGD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235227
            Assembly: GCF_045608805.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5034028)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHGD000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHGD000000000.  This version of the project
            (01) has the accession number NZ_JBIHGD010000000, and consists of
            sequences JBIHGD010000001-JBIHGD010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 177x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045608805.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:33:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,949
            CDSs (total)                      :: 4,831
            Genes (coding)                    :: 4,644
            CDSs (with protein)               :: 4,644
            Genes (RNA)                       :: 118
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 187
            CDSs (without protein)            :: 187
            Pseudo Genes (ambiguous residues) :: 0 of 187
            Pseudo Genes (frameshifted)       :: 93 of 187
            Pseudo Genes (incomplete)         :: 100 of 187
            Pseudo Genes (internal stop)      :: 33 of 187
            Pseudo Genes (multiple problems)  :: 39 of 187
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5034028
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E885"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHGD010000001-JBIHGD010000006
WGS_SCAFLD  NZ_JBIHGD010000001-NZ_JBIHGD010000006
//
LOCUS       NZ_JBIXAT010000000   5279043 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1180, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXAT000000000
VERSION     NZ_JBIXAT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247334
            Assembly: GCF_045619325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5279043)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXAT000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXAT000000000.  This version of the project
            (01) has the accession number NZ_JBIXAT010000000, and consists of
            sequences JBIXAT010000001-JBIXAT010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 578x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045619325.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:50:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,257
            CDSs (total)                      :: 5,145
            Genes (coding)                    :: 4,832
            CDSs (with protein)               :: 4,832
            Genes (RNA)                       :: 112
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 313
            CDSs (without protein)            :: 313
            Pseudo Genes (ambiguous residues) :: 0 of 313
            Pseudo Genes (frameshifted)       :: 164 of 313
            Pseudo Genes (incomplete)         :: 182 of 313
            Pseudo Genes (internal stop)      :: 33 of 313
            Pseudo Genes (multiple problems)  :: 59 of 313
            Pseudo Genes (short protein)      :: 1 of 313
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5279043
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1180"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXAT010000001-JBIXAT010000006
WGS_SCAFLD  NZ_JBIXAT010000001-NZ_JBIXAT010000006
//
LOCUS       NZ_JBIHJM010000000   5003187 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E754, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHJM000000000
VERSION     NZ_JBIHJM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235116
            Assembly: GCF_045610545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5003187)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHJM000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHJM000000000.  This version of the project
            (01) has the accession number NZ_JBIHJM010000000, and consists of
            sequences JBIHJM010000001-JBIHJM010000024.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 311x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045610545.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:37:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,781
            CDSs (total)                      :: 4,658
            Genes (coding)                    :: 4,452
            CDSs (with protein)               :: 4,452
            Genes (RNA)                       :: 123
            rRNAs                             :: 8, 8, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 206
            CDSs (without protein)            :: 206
            Pseudo Genes (ambiguous residues) :: 0 of 206
            Pseudo Genes (frameshifted)       :: 128 of 206
            Pseudo Genes (incomplete)         :: 83 of 206
            Pseudo Genes (internal stop)      :: 17 of 206
            Pseudo Genes (multiple problems)  :: 22 of 206
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5003187
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E754"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHJM010000001-JBIHJM010000024
WGS_SCAFLD  NZ_JBIHJM010000001-NZ_JBIHJM010000024
//
LOCUS       NZ_JBIWZE010000000   5321126 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1229, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIWZE000000000
VERSION     NZ_JBIWZE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247375
            Assembly: GCF_045618505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5321126)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIWZE000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIWZE000000000.  This version of the project
            (01) has the accession number NZ_JBIWZE010000000, and consists of
            sequences JBIWZE010000001-JBIWZE010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 469x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045618505.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:44:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,282
            CDSs (total)                      :: 5,163
            Genes (coding)                    :: 4,849
            CDSs (with protein)               :: 4,849
            Genes (RNA)                       :: 119
            rRNAs                             :: 8, 8, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            tRNAs                             :: 91
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 314
            CDSs (without protein)            :: 314
            Pseudo Genes (ambiguous residues) :: 0 of 314
            Pseudo Genes (frameshifted)       :: 160 of 314
            Pseudo Genes (incomplete)         :: 184 of 314
            Pseudo Genes (internal stop)      :: 34 of 314
            Pseudo Genes (multiple problems)  :: 57 of 314
            Pseudo Genes (short protein)      :: 1 of 314
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5321126
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1229"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIWZE010000001-JBIWZE010000006
WGS_SCAFLD  NZ_JBIWZE010000001-NZ_JBIWZE010000006
//
LOCUS       NZ_JBIXAU010000000   5230897 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1179, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXAU000000000
VERSION     NZ_JBIXAU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247333
            Assembly: GCF_045619285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5230897)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXAU000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXAU000000000.  This version of the project
            (01) has the accession number NZ_JBIXAU010000000, and consists of
            sequences JBIXAU010000001-JBIXAU010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 773x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045619285.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:43:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,176
            CDSs (total)                      :: 5,060
            Genes (coding)                    :: 4,743
            CDSs (with protein)               :: 4,743
            Genes (RNA)                       :: 116
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 317
            CDSs (without protein)            :: 317
            Pseudo Genes (ambiguous residues) :: 0 of 317
            Pseudo Genes (frameshifted)       :: 166 of 317
            Pseudo Genes (incomplete)         :: 184 of 317
            Pseudo Genes (internal stop)      :: 33 of 317
            Pseudo Genes (multiple problems)  :: 59 of 317
            Pseudo Genes (short protein)      :: 1 of 317
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5230897
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1179"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXAU010000001-JBIXAU010000006
WGS_SCAFLD  NZ_JBIXAU010000001-NZ_JBIXAU010000006
//
LOCUS       NZ_JBVTTZ010000000   3888044 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Flavobacterium sp. TS_SC_5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBVTTZ000000000
VERSION     NZ_JBVTTZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52392036
            Assembly: GCF_056156265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Flavobacterium sp. TS_SC_5
  ORGANISM  Flavobacterium sp. TS_SC_5
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flavobacterium.
REFERENCE   1  (bases 1 to 3888044)
  AUTHORS   Chatterjee,S., Dutta,S. and Ghosh,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-JAN-2026) Department of Biological Sciences, Bose
            Institute, Salt Lake, EN Block, Sector V, Kolkata 700091, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBVTTZ000000000.1.
            The Flavobacterium sp. TS_SC_5 whole genome shotgun (WGS) project
            has the project accession NZ_JBVTTZ000000000.  This version of the
            project (01) has the accession number NZ_JBVTTZ010000000, and
            consists of sequence JBVTTZ010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.5.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 916.21x
            Sequencing Technology  :: Illumina; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056156265.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:23:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,354
            CDSs (total)                      :: 3,281
            Genes (coding)                    :: 3,215
            CDSs (with protein)               :: 3,215
            Genes (RNA)                       :: 73
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 66
            CDSs (without protein)            :: 66
            Pseudo Genes (ambiguous residues) :: 0 of 66
            Pseudo Genes (frameshifted)       :: 37 of 66
            Pseudo Genes (incomplete)         :: 25 of 66
            Pseudo Genes (internal stop)      :: 10 of 66
            Pseudo Genes (multiple problems)  :: 6 of 66
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3888044
                     /organism="Flavobacterium sp. TS_SC_5"
                     /mol_type="genomic DNA"
                     /strain="TS_SC_5"
                     /isolation_source="TsoMoriri Lake Sediment"
                     /db_xref="taxon:3469944"
                     /geo_loc_name="India: TsoMoriri Lake, Ladakh"
                     /collection_date="2021-10-28"
WGS         JBVTTZ010000001
WGS_SCAFLD  NZ_CM149588
//
LOCUS       NZ_JBSWWP010000000   3389329 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Flagellimonas sp. ABD4_174, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWWP000000000
VERSION     NZ_JBSWWP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861943
            Assembly: GCF_056160185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Flagellimonas sp. ABD4_174
  ORGANISM  Flagellimonas sp. ABD4_174
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flagellimonas.
REFERENCE   1  (bases 1 to 3389329)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWWP000000000.1.
            The Flagellimonas sp. ABD4_174 whole genome shotgun (WGS) project
            has the project accession NZ_JBSWWP000000000.  This version of the
            project (01) has the accession number NZ_JBSWWP010000000, and
            consists of sequences JBSWWP010000001-JBSWWP010000009.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1448x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056160185.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:25:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,039
            CDSs (total)                      :: 2,991
            Genes (coding)                    :: 2,984
            CDSs (with protein)               :: 2,984
            Genes (RNA)                       :: 48
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 38
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 1 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            Pseudo Genes (multiple problems)  :: 1 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3389329
                     /organism="Flagellimonas sp. ABD4_174"
                     /mol_type="genomic DNA"
                     /strain="ABD4_174"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477744"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWWP010000001-JBSWWP010000009
WGS_SCAFLD  NZ_JBSWWP010000001-NZ_JBSWWP010000009
//
LOCUS       NZ_JBSWSY010000000   3971050 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Halobacillus sp. AWM4_238, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWSY000000000
VERSION     NZ_JBSWSY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862052
            Assembly: GCF_056158265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Halobacillus sp. AWM4_238
  ORGANISM  Halobacillus sp. AWM4_238
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Halobacillus.
REFERENCE   1  (bases 1 to 3971050)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWSY000000000.1.
            The Halobacillus sp. AWM4_238 whole genome shotgun (WGS) project
            has the project accession NZ_JBSWSY000000000.  This version of the
            project (01) has the accession number NZ_JBSWSY010000000, and
            consists of sequences JBSWSY010000001-JBSWSY010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1043x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056158265.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:59:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,953
            CDSs (total)                      :: 3,848
            Genes (coding)                    :: 3,831
            CDSs (with protein)               :: 3,831
            Genes (RNA)                       :: 105
            rRNAs                             :: 9, 9, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 9 (5S, 16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 17
            CDSs (without protein)            :: 17
            Pseudo Genes (ambiguous residues) :: 0 of 17
            Pseudo Genes (frameshifted)       :: 7 of 17
            Pseudo Genes (incomplete)         :: 11 of 17
            Pseudo Genes (internal stop)      :: 3 of 17
            Pseudo Genes (multiple problems)  :: 4 of 17
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3971050
                     /organism="Halobacillus sp. AWM4_238"
                     /mol_type="genomic DNA"
                     /strain="AWM4_238"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477691"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-10-31"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWSY010000001-JBSWSY010000004
WGS_SCAFLD  NZ_JBSWSY010000001-NZ_JBSWSY010000004
//
LOCUS       NZ_JBSWYJ010000000   6524596 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Flammeovirga sp. AWQ4_249, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWYJ000000000
VERSION     NZ_JBSWYJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861896
            Assembly: GCF_056161045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Flammeovirga sp. AWQ4_249
  ORGANISM  Flammeovirga sp. AWQ4_249
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Flammeovirgaceae; Flammeovirga.
REFERENCE   1  (bases 1 to 6524596)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWYJ000000000.1.
            The Flammeovirga sp. AWQ4_249 whole genome shotgun (WGS) project
            has the project accession NZ_JBSWYJ000000000.  This version of the
            project (01) has the accession number NZ_JBSWYJ010000000, and
            consists of sequences JBSWYJ010000001-JBSWYJ010000183.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 149x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161045.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:51:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,313
            CDSs (total)                      :: 5,214
            Genes (coding)                    :: 5,173
            CDSs (with protein)               :: 5,173
            Genes (RNA)                       :: 99
            rRNAs                             :: 4, 3, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 3, 6 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 41
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 2 of 42
            Pseudo Genes (incomplete)         :: 35 of 42
            Pseudo Genes (internal stop)      :: 9 of 42
            Pseudo Genes (multiple problems)  :: 4 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6524596
                     /organism="Flammeovirga sp. AWQ4_249"
                     /mol_type="genomic DNA"
                     /strain="AWQ4_249"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477774"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-10-31"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWYJ010000001-JBSWYJ010000183
WGS_SCAFLD  NZ_JBSWYJ010000001-NZ_JBSWYJ010000183
//
LOCUS       NZ_JBWGIK010000000   1765724 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Francisella tularensis isolate 132008, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBWGIK000000000
VERSION     NZ_JBWGIK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56532518
            Assembly: GCF_056162745.1
KEYWORDS    WGS; RefSeq.
SOURCE      Francisella tularensis
  ORGANISM  Francisella tularensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Thiotrichales; Francisellaceae; Francisella.
REFERENCE   1  (bases 1 to 1765724)
  AUTHORS   Tolchkov,V., Nenova,R., Tomova,I. and Tsafarova,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAR-2026) Microbiology, National Center of Infectious
            and Parasitic Diseases, 26 Yanko Sakazov blvd., Sofia 1505,
            Bulgaria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWGIK000000000.1.
            The Francisella tularensis whole genome shotgun (WGS) project has
            the project accession NZ_JBWGIK000000000.  This version of the
            project (01) has the accession number NZ_JBWGIK010000000, and
            consists of sequences JBWGIK010000001-JBWGIK010000104.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. SPAdes Unicycler 0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 23.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162745.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:07:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,839
            CDSs (total)                      :: 1,797
            Genes (coding)                    :: 1,565
            CDSs (with protein)               :: 1,565
            Genes (RNA)                       :: 42
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 232
            CDSs (without protein)            :: 232
            Pseudo Genes (ambiguous residues) :: 0 of 232
            Pseudo Genes (frameshifted)       :: 139 of 232
            Pseudo Genes (incomplete)         :: 49 of 232
            Pseudo Genes (internal stop)      :: 93 of 232
            Pseudo Genes (multiple problems)  :: 46 of 232
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1765724
                     /organism="Francisella tularensis"
                     /mol_type="genomic DNA"
                     /isolate="132008"
                     /isolation_source="drink water"
                     /db_xref="taxon:263"
                     /geo_loc_name="Bulgaria: Meshtitsa"
                     /lat_lon="42.67 N 23.00 E"
                     /collection_date="2002-02-19"
                     /collected_by="National Center of Infectious and Parasitic
                     Diseases"
WGS         JBWGIK010000001-JBWGIK010000104
WGS_SCAFLD  NZ_JBWGIK010000001-NZ_JBWGIK010000104
//
LOCUS       NZ_JBSWUG010000000   3958681 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Halobacillus sp. ABH2_015, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWUG000000000
VERSION     NZ_JBSWUG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862014
            Assembly: GCF_056158945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Halobacillus sp. ABH2_015
  ORGANISM  Halobacillus sp. ABH2_015
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Halobacillus.
REFERENCE   1  (bases 1 to 3958681)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWUG000000000.1.
            The Halobacillus sp. ABH2_015 whole genome shotgun (WGS) project
            has the project accession NZ_JBSWUG000000000.  This version of the
            project (01) has the accession number NZ_JBSWUG010000000, and
            consists of sequences JBSWUG010000001-JBSWUG010000006.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 433x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056158945.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:07:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,101
            CDSs (total)                      :: 3,995
            Genes (coding)                    :: 3,966
            CDSs (with protein)               :: 3,966
            Genes (RNA)                       :: 106
            rRNAs                             :: 9, 9, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 9, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 75
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 6 of 29
            Pseudo Genes (incomplete)         :: 23 of 29
            Pseudo Genes (internal stop)      :: 4 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3958681
                     /organism="Halobacillus sp. ABH2_015"
                     /mol_type="genomic DNA"
                     /strain="ABH2_015"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477715"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWUG010000001-JBSWUG010000006
WGS_SCAFLD  NZ_JBSWUG010000001-NZ_JBSWUG010000006
//
LOCUS       NZ_JBWGII010000000   1765361 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Francisella tularensis isolate 122008, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBWGII000000000
VERSION     NZ_JBWGII000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56527542
            Assembly: GCF_056162765.1
KEYWORDS    WGS; RefSeq.
SOURCE      Francisella tularensis
  ORGANISM  Francisella tularensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Thiotrichales; Francisellaceae; Francisella.
REFERENCE   1  (bases 1 to 1765361)
  AUTHORS   Tolchkov,V., Nenova,R., Tomov,I. and Tsafarova,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2026) Microbiology, National Center of Infectious
            and Parasitic Diseases, 26 Yanko Sakazov blvd., Sofia 1505,
            Bulgaria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWGII000000000.1.
            The Francisella tularensis whole genome shotgun (WGS) project has
            the project accession NZ_JBWGII000000000.  This version of the
            project (01) has the accession number NZ_JBWGII010000000, and
            consists of sequences JBWGII010000001-JBWGII010000105.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. SPAdes Unicycler 0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 24.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162765.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:04:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,837
            CDSs (total)                      :: 1,795
            Genes (coding)                    :: 1,566
            CDSs (with protein)               :: 1,566
            Genes (RNA)                       :: 42
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 229
            CDSs (without protein)            :: 229
            Pseudo Genes (ambiguous residues) :: 0 of 229
            Pseudo Genes (frameshifted)       :: 139 of 229
            Pseudo Genes (incomplete)         :: 46 of 229
            Pseudo Genes (internal stop)      :: 93 of 229
            Pseudo Genes (multiple problems)  :: 46 of 229
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1765361
                     /organism="Francisella tularensis"
                     /mol_type="genomic DNA"
                     /isolate="122008"
                     /isolation_source="drink water"
                     /db_xref="taxon:263"
                     /geo_loc_name="Bulgaria: Meshtitsa"
                     /lat_lon="42.67 N 23.00 E"
                     /collection_date="2002-02-19"
                     /collected_by="National Center of Infectious and Parasitic
                     Diseases"
WGS         JBWGII010000001-JBWGII010000105
WGS_SCAFLD  NZ_JBWGII010000001-NZ_JBWGII010000105
//
LOCUS       NZ_JBRWOB010000000   5572038 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain PE301145, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWOB000000000
VERSION     NZ_JBRWOB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385092
            Assembly: GCF_056162185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5572038)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5572038)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWOB000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWOB000000000.  This version of the
            project (01) has the accession number NZ_JBRWOB010000000, and
            consists of sequences JBRWOB010000001-JBRWOB010000100.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162185.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:01:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,627
            CDSs (total)                      :: 5,548
            Genes (coding)                    :: 5,416
            CDSs (with protein)               :: 5,416
            Genes (RNA)                       :: 79
            rRNAs                             :: 2, 1, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 4 (16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 132
            CDSs (without protein)            :: 132
            Pseudo Genes (ambiguous residues) :: 0 of 132
            Pseudo Genes (frameshifted)       :: 41 of 132
            Pseudo Genes (incomplete)         :: 86 of 132
            Pseudo Genes (internal stop)      :: 19 of 132
            Pseudo Genes (multiple problems)  :: 11 of 132
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5572038
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="PE301145"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982746 N 116.360012 E"
                     /collection_date="2023-03-27"
                     /collected_by="Ping Yang"
                     /genotype="ST11"
WGS         JBRWOB010000001-JBRWOB010000100
WGS_SCAFLD  NZ_JBRWOB010000001-NZ_JBRWOB010000100
//
LOCUS       NZ_JBSWTE010000000   3836579 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Halobacillus sp. AWH4_228, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWTE000000000
VERSION     NZ_JBSWTE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862046
            Assembly: GCF_056158365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Halobacillus sp. AWH4_228
  ORGANISM  Halobacillus sp. AWH4_228
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Halobacillus.
REFERENCE   1  (bases 1 to 3836579)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWTE000000000.1.
            The Halobacillus sp. AWH4_228 whole genome shotgun (WGS) project
            has the project accession NZ_JBSWTE000000000.  This version of the
            project (01) has the accession number NZ_JBSWTE010000000, and
            consists of sequences JBSWTE010000001-JBSWTE010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1046x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056158365.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:09:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,957
            CDSs (total)                      :: 3,861
            Genes (coding)                    :: 3,835
            CDSs (with protein)               :: 3,835
            Genes (RNA)                       :: 96
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 8, 8 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 68
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 7 of 26
            Pseudo Genes (incomplete)         :: 21 of 26
            Pseudo Genes (internal stop)      :: 2 of 26
            Pseudo Genes (multiple problems)  :: 3 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3836579
                     /organism="Halobacillus sp. AWH4_228"
                     /mol_type="genomic DNA"
                     /strain="AWH4_228"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477696"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-10-31"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWTE010000001-JBSWTE010000002
WGS_SCAFLD  NZ_JBSWTE010000001-NZ_JBSWTE010000002
//
LOCUS       NZ_JBSWUF010000000   3859542 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Halobacillus litoralis strain ABH4_046, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSWUF000000000
VERSION     NZ_JBSWUF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862015
            Assembly: GCF_056158925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Halobacillus litoralis
  ORGANISM  Halobacillus litoralis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Halobacillus.
REFERENCE   1  (bases 1 to 3859542)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWUF000000000.1.
            The Halobacillus litoralis whole genome shotgun (WGS) project has
            the project accession NZ_JBSWUF000000000.  This version of the
            project (01) has the accession number NZ_JBSWUF010000000, and
            consists of sequences JBSWUF010000001-JBSWUF010000007.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 453x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056158925.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:07:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,972
            CDSs (total)                      :: 3,888
            Genes (coding)                    :: 3,808
            CDSs (with protein)               :: 3,808
            Genes (RNA)                       :: 84
            rRNAs                             :: 7, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 80
            CDSs (without protein)            :: 80
            Pseudo Genes (ambiguous residues) :: 0 of 80
            Pseudo Genes (frameshifted)       :: 60 of 80
            Pseudo Genes (incomplete)         :: 21 of 80
            Pseudo Genes (internal stop)      :: 0 of 80
            Pseudo Genes (multiple problems)  :: 1 of 80
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3859542
                     /organism="Halobacillus litoralis"
                     /mol_type="genomic DNA"
                     /strain="ABH4_046"
                     /isolation_source="Marine"
                     /db_xref="taxon:45668"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWUF010000001-JBSWUF010000007
WGS_SCAFLD  NZ_JBSWUF010000001-NZ_JBSWUF010000007
//
LOCUS       NZ_JBRWOA010000000   5578605 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain PE331272, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWOA000000000
VERSION     NZ_JBRWOA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385093
            Assembly: GCF_056162145.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5578605)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5578605)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWOA000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWOA000000000.  This version of the
            project (01) has the accession number NZ_JBRWOA010000000, and
            consists of sequences JBRWOA010000001-JBRWOA010000068.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162145.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:05:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,480
            CDSs (total)                      :: 5,404
            Genes (coding)                    :: 5,279
            CDSs (with protein)               :: 5,279
            Genes (RNA)                       :: 76
            rRNAs                             :: 1, 2 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 60
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 125
            CDSs (without protein)            :: 125
            Pseudo Genes (ambiguous residues) :: 0 of 125
            Pseudo Genes (frameshifted)       :: 55 of 125
            Pseudo Genes (incomplete)         :: 69 of 125
            Pseudo Genes (internal stop)      :: 17 of 125
            Pseudo Genes (multiple problems)  :: 14 of 125
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5578605
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="PE331272"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982747 N 116.360012 E"
                     /collection_date="2023-04-19"
                     /collected_by="Ping Yang"
                     /genotype="ST307"
WGS         JBRWOA010000001-JBRWOA010000068
WGS_SCAFLD  NZ_JBRWOA010000001-NZ_JBRWOA010000068
//
LOCUS       NZ_JBRWOC010000000   5651674 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain PE291106, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWOC000000000
VERSION     NZ_JBRWOC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385091
            Assembly: GCF_056162165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5651674)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5651674)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWOC000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWOC000000000.  This version of the
            project (01) has the accession number NZ_JBRWOC010000000, and
            consists of sequences JBRWOC010000001-JBRWOC010000119.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162165.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:08:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,679
            CDSs (total)                      :: 5,599
            Genes (coding)                    :: 5,463
            CDSs (with protein)               :: 5,463
            Genes (RNA)                       :: 80
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 136
            CDSs (without protein)            :: 136
            Pseudo Genes (ambiguous residues) :: 0 of 136
            Pseudo Genes (frameshifted)       :: 50 of 136
            Pseudo Genes (incomplete)         :: 91 of 136
            Pseudo Genes (internal stop)      :: 18 of 136
            Pseudo Genes (multiple problems)  :: 19 of 136
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5651674
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="PE291106"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982745 N 116.360012 E"
                     /collection_date="2023-03-20"
                     /collected_by="Ping Yang"
                     /genotype="ST11"
WGS         JBRWOC010000001-JBRWOC010000119
WGS_SCAFLD  NZ_JBRWOC010000001-NZ_JBRWOC010000119
//
LOCUS       NZ_JBSWSU010000000   5726877 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Fulvivirga sp. AWR4_260, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWSU000000000
VERSION     NZ_JBSWSU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862056
            Assembly: GCF_056158185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Fulvivirga sp. AWR4_260
  ORGANISM  Fulvivirga sp. AWR4_260
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Fulvivirgaceae; Fulvivirga.
REFERENCE   1  (bases 1 to 5726877)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWSU000000000.1.
            The Fulvivirga sp. AWR4_260 whole genome shotgun (WGS) project has
            the project accession NZ_JBSWSU000000000.  This version of the
            project (01) has the accession number NZ_JBSWSU010000000, and
            consists of sequences JBSWSU010000001-JBSWSU010000022.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 665x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056158185.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:03:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,751
            CDSs (total)                      :: 4,688
            Genes (coding)                    :: 4,664
            CDSs (with protein)               :: 4,664
            Genes (RNA)                       :: 63
            rRNAs                             :: 2, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 4, 2 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 50
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 6 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 4 of 24
            Pseudo Genes (multiple problems)  :: 3 of 24
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5726877
                     /organism="Fulvivirga sp. AWR4_260"
                     /mol_type="genomic DNA"
                     /strain="AWR4_260"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477688"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-10-31"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWSU010000001-JBSWSU010000022
WGS_SCAFLD  NZ_JBSWSU010000001-NZ_JBSWSU010000022
//
LOCUS       NZ_JBRWOD010000000   5459644 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain PE271027, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWOD000000000
VERSION     NZ_JBRWOD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385090
            Assembly: GCF_056162225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5459644)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5459644)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWOD000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWOD000000000.  This version of the
            project (01) has the accession number NZ_JBRWOD010000000, and
            consists of sequences JBRWOD010000001-JBRWOD010000093.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162225.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:09:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,475
            CDSs (total)                      :: 5,401
            Genes (coding)                    :: 5,279
            CDSs (with protein)               :: 5,279
            Genes (RNA)                       :: 74
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 122
            CDSs (without protein)            :: 122
            Pseudo Genes (ambiguous residues) :: 0 of 122
            Pseudo Genes (frameshifted)       :: 41 of 122
            Pseudo Genes (incomplete)         :: 78 of 122
            Pseudo Genes (internal stop)      :: 17 of 122
            Pseudo Genes (multiple problems)  :: 11 of 122
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5459644
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="PE271027"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982744 N 116.360012 E"
                     /collection_date="2023-03-05"
                     /collected_by="Ping Yang"
                     /genotype="ST11"
WGS         JBRWOD010000001-JBRWOD010000093
WGS_SCAFLD  NZ_JBRWOD010000001-NZ_JBRWOD010000093
//
LOCUS       NZ_JBRWNY010000000   5563854 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain PEKP5008, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWNY000000000
VERSION     NZ_JBRWNY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385095
            Assembly: GCF_056162105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5563854)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5563854)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWNY000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWNY000000000.  This version of the
            project (01) has the accession number NZ_JBRWNY010000000, and
            consists of sequences JBRWNY010000001-JBRWNY010000060.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162105.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:11:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,459
            CDSs (total)                      :: 5,383
            Genes (coding)                    :: 5,262
            CDSs (with protein)               :: 5,262
            Genes (RNA)                       :: 76
            rRNAs                             :: 1, 2 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 60
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 121
            CDSs (without protein)            :: 121
            Pseudo Genes (ambiguous residues) :: 0 of 121
            Pseudo Genes (frameshifted)       :: 54 of 121
            Pseudo Genes (incomplete)         :: 69 of 121
            Pseudo Genes (internal stop)      :: 17 of 121
            Pseudo Genes (multiple problems)  :: 16 of 121
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5563854
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="PEKP5008"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982749 N 116.360012 E"
                     /collection_date="2021-02-14"
                     /collected_by="Ping Yang"
                     /genotype="ST307"
WGS         JBRWNY010000001-JBRWNY010000060
WGS_SCAFLD  NZ_JBRWNY010000001-NZ_JBRWNY010000060
//
LOCUS       NZ_JBSWTM010000000   3989183 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Halobacillus sp. ABR2_026, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWTM000000000
VERSION     NZ_JBSWTM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862037
            Assembly: GCF_056158545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Halobacillus sp. ABR2_026
  ORGANISM  Halobacillus sp. ABR2_026
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Halobacillus.
REFERENCE   1  (bases 1 to 3989183)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWTM000000000.1.
            The Halobacillus sp. ABR2_026 whole genome shotgun (WGS) project
            has the project accession NZ_JBSWTM000000000.  This version of the
            project (01) has the accession number NZ_JBSWTM010000000, and
            consists of sequences JBSWTM010000001-JBSWTM010000007.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 985x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056158545.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:10:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,032
            CDSs (total)                      :: 3,936
            Genes (coding)                    :: 3,877
            CDSs (with protein)               :: 3,877
            Genes (RNA)                       :: 96
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 52 of 59
            Pseudo Genes (incomplete)         :: 6 of 59
            Pseudo Genes (internal stop)      :: 6 of 59
            Pseudo Genes (multiple problems)  :: 4 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3989183
                     /organism="Halobacillus sp. ABR2_026"
                     /mol_type="genomic DNA"
                     /strain="ABR2_026"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477704"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWTM010000001-JBSWTM010000007
WGS_SCAFLD  NZ_JBSWTM010000001-NZ_JBSWTM010000007
//
LOCUS       NZ_AOQU01000000      4657618 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli TOP2522-1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AOQU00000000
VERSION     NZ_AOQU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN01894027
            Assembly: GCF_000397605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli TOP2522-1
  ORGANISM  Escherichia coli TOP2522-1
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4657618)
  AUTHORS   Chen,S.L., Wu,M., Henderson,J.P., Hooton,T.M., Hibbing,M.E.,
            Hultgren,S.J. and Gordon,J.I.
  TITLE     Genomic diversity and fitness of E. coli strains recovered from the
            intestinal and urinary tracts of women with recurrent urinary tract
            infection
  JOURNAL   Sci Transl Med 5 (184), 184ra60 (2013)
   PUBMED   23658245
REFERENCE   2  (bases 1 to 4657618)
  AUTHORS   Chen,S.L., Wu,M., Henderson,J.P., Hooton,T.M., Hibbing,M.E.,
            Hultgren,S.J. and Gordon,J.I.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-JAN-2013) Medicine, Infectious Diseases, National
            University of Singapore, Genome Institute of Singapore, 60 Biopolis
            Street, Genome #02-01, Singapore 138672, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AOQU00000000.1.
            The Escherichia coli TOP2522-1 whole genome shotgun (WGS) project
            has the project accession NZ_AOQU00000000.  This version of the
            project (01) has the accession number NZ_AOQU01000000, and consists
            of sequences AOQU01000001-AOQU01000412.
            Bacteria and source DNA available from Scott Hultgren, Washington
            University in St. Louis, St. Louis, Missouri, USA.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 0.7
            Assembly Name         :: Ec72_E2F1_TOP2522-1_120714
            Long Assembly Name    :: Ec72_E2F1 (TOP2522-1) assembly, July 14
                                     2012
            Genome Coverage       :: 82.0x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000397605.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:09:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,513
            CDSs (total)                      :: 4,485
            Genes (coding)                    :: 4,302
            CDSs (with protein)               :: 4,302
            Genes (RNA)                       :: 28
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 19
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 183
            CDSs (without protein)            :: 183
            Pseudo Genes (ambiguous residues) :: 0 of 183
            Pseudo Genes (frameshifted)       :: 51 of 183
            Pseudo Genes (incomplete)         :: 118 of 183
            Pseudo Genes (internal stop)      :: 31 of 183
            Pseudo Genes (multiple problems)  :: 16 of 183
            Pseudo Genes (short protein)      :: 1 of 183
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4657618
                     /organism="Escherichia coli TOP2522-1"
                     /mol_type="genomic DNA"
                     /strain="TOP2522-1"
                     /isolation_source="feces from female"
                     /host="Homo sapiens"
                     /db_xref="taxon:1286348"
                     /geo_loc_name="USA: Seattle, WA"
                     /collection_date="2005-04-01"
                     /collected_by="Thomas Hooton and Ann Stapleton"
WGS         AOQU01000001-AOQU01000412
WGS_SCAFLD  NZ_AOQU01000001-NZ_AOQU01000412
//
LOCUS       NZ_JBRWNZ010000000   5614009 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain PEKP4193, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWNZ000000000
VERSION     NZ_JBRWNZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385094
            Assembly: GCF_056162125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5614009)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5614009)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWNZ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWNZ000000000.  This version of the
            project (01) has the accession number NZ_JBRWNZ010000000, and
            consists of sequences JBRWNZ010000001-JBRWNZ010000073.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162125.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:10:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,492
            CDSs (total)                      :: 5,413
            Genes (coding)                    :: 5,269
            CDSs (with protein)               :: 5,269
            Genes (RNA)                       :: 79
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 144
            CDSs (without protein)            :: 144
            Pseudo Genes (ambiguous residues) :: 0 of 144
            Pseudo Genes (frameshifted)       :: 58 of 144
            Pseudo Genes (incomplete)         :: 87 of 144
            Pseudo Genes (internal stop)      :: 22 of 144
            Pseudo Genes (multiple problems)  :: 19 of 144
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5614009
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="PEKP4193"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982748 N 116.360012 E"
                     /collection_date="2021-02-20"
                     /collected_by="Ping Yang"
                     /genotype="ST15"
WGS         JBRWNZ010000001-JBRWNZ010000073
WGS_SCAFLD  NZ_JBRWNZ010000001-NZ_JBRWNZ010000073
//
LOCUS       NZ_JBRWOF010000000   5529862 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain PE20774, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWOF000000000
VERSION     NZ_JBRWOF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385088
            Assembly: GCF_056162205.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5529862)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5529862)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWOF000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWOF000000000.  This version of the
            project (01) has the accession number NZ_JBRWOF010000000, and
            consists of sequences JBRWOF010000001-JBRWOF010000056.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162205.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:11:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,427
            CDSs (total)                      :: 5,340
            Genes (coding)                    :: 5,223
            CDSs (with protein)               :: 5,223
            Genes (RNA)                       :: 87
            rRNAs                             :: 2, 4 (5S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4 (23S)
            tRNAs                             :: 68
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 117
            CDSs (without protein)            :: 117
            Pseudo Genes (ambiguous residues) :: 0 of 117
            Pseudo Genes (frameshifted)       :: 55 of 117
            Pseudo Genes (incomplete)         :: 60 of 117
            Pseudo Genes (internal stop)      :: 19 of 117
            Pseudo Genes (multiple problems)  :: 15 of 117
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5529862
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="PE20774"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982742 N 116.360012 E"
                     /collection_date="2022-12-24"
                     /collected_by="Ping Yang"
                     /genotype="ST307"
WGS         JBRWOF010000001-JBRWOF010000056
WGS_SCAFLD  NZ_JBRWOF010000001-NZ_JBRWOF010000056
//
LOCUS       NZ_JBSWVS010000000   3738509 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Halobacillus salinus strain ABL4_135, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSWVS000000000
VERSION     NZ_JBSWVS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861969
            Assembly: GCF_056159685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Halobacillus salinus
  ORGANISM  Halobacillus salinus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Halobacillus.
REFERENCE   1  (bases 1 to 3738509)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWVS000000000.1.
            The Halobacillus salinus whole genome shotgun (WGS) project has the
            project accession NZ_JBSWVS000000000.  This version of the project
            (01) has the accession number NZ_JBSWVS010000000, and consists of
            sequences JBSWVS010000001-JBSWVS010000045.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1040x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056159685.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:13:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,968
            CDSs (total)                      :: 3,893
            Genes (coding)                    :: 3,878
            CDSs (with protein)               :: 3,878
            Genes (RNA)                       :: 75
            rRNAs                             :: 3, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 3 (16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 15
            CDSs (without protein)            :: 15
            Pseudo Genes (ambiguous residues) :: 0 of 15
            Pseudo Genes (frameshifted)       :: 5 of 15
            Pseudo Genes (incomplete)         :: 9 of 15
            Pseudo Genes (internal stop)      :: 1 of 15
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3738509
                     /organism="Halobacillus salinus"
                     /mol_type="genomic DNA"
                     /strain="ABL4_135"
                     /isolation_source="Marine"
                     /db_xref="taxon:192814"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-07-26"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWVS010000001-JBSWVS010000045
WGS_SCAFLD  NZ_JBSWVS010000001-NZ_JBSWVS010000045
//
LOCUS       NZ_JBSWVL010000000   4561786 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Halomonas litopenaei strain ABR4_011, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSWVL000000000
VERSION     NZ_JBSWVL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861977
            Assembly: GCF_056159565.1
KEYWORDS    WGS; RefSeq.
SOURCE      Halomonas litopenaei
  ORGANISM  Halomonas litopenaei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Halomonas.
REFERENCE   1  (bases 1 to 4561786)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWVL000000000.1.
            The Halomonas litopenaei whole genome shotgun (WGS) project has the
            project accession NZ_JBSWVL000000000.  This version of the project
            (01) has the accession number NZ_JBSWVL010000000, and consists of
            sequences JBSWVL010000001-JBSWVL010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 582x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056159565.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:18:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,916
            CDSs (total)                      :: 3,834
            Genes (coding)                    :: 3,819
            CDSs (with protein)               :: 3,819
            Genes (RNA)                       :: 82
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 15
            CDSs (without protein)            :: 15
            Pseudo Genes (ambiguous residues) :: 0 of 15
            Pseudo Genes (frameshifted)       :: 3 of 15
            Pseudo Genes (incomplete)         :: 14 of 15
            Pseudo Genes (internal stop)      :: 1 of 15
            Pseudo Genes (multiple problems)  :: 3 of 15
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4561786
                     /organism="Halomonas litopenaei"
                     /mol_type="genomic DNA"
                     /strain="ABR4_011"
                     /isolation_source="Marine"
                     /db_xref="taxon:2109328"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWVL010000001-JBSWVL010000002
WGS_SCAFLD  NZ_JBSWVL010000001-NZ_JBSWVL010000002
//
LOCUS       NZ_JHJF01000000      5469015 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli O157:H7 str. K1420, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JHJF00000000
VERSION     NZ_JHJF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02353086
            Assembly: GCF_000618025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli O157:H7 str. K1420
  ORGANISM  Escherichia coli O157:H7 str. K1420
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5469015)
  AUTHORS   Trees,E., Strockbine,N., Changayil,S., Ranganathan,S., Zhao,K.,
            Weil,R., MacCannell,D., Sabol,A., Schmidtke,A., Martin,H.,
            Stripling,D., Ribot,E.M. and Gerner-Smidt,P.
  TITLE     Genome Sequences of 228 Shiga Toxin-Producing Escherichia coli
            Isolates and 12 Isolates Representing Other Diarrheagenic E. coli
            Pathotypes
  JOURNAL   Genome Announc 2 (4), e00718-14 (2014)
   PUBMED   25103754
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5469015)
  AUTHORS   Lindsey,R., Trees,E., Sammons,S., Frace,M., Loparev,V., Sabol,A.,
            Strockbine,N. and Gerner-Smidt,P.
  TITLE     PulseNet STEC Genome Sequencing
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 5469015)
  AUTHORS   Lindsey,R., Trees,E., Sammons,S., Frace,M., Loparev,V., Sabol,A.,
            Strockbine,N. and Gerner-Smidt,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-FEB-2014) Enteric Diseases Laboratory Branch, DFWED,
            NCEZID, Centers For Disease Control, 1600 Clifton Road,NE, MS-CO3,
            Atlanta, GA 30329, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JHJF00000000.1.
            The Escherichia coli O157:H7 str. K1420 whole genome shotgun (WGS)
            project has the project accession NZ_JHJF00000000.  This version of
            the project (01) has the accession number NZ_JHJF01000000, and
            consists of sequences JHJF01000001-JHJF01000091.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: wgs assembler v. 7.0.Dec-2012
            Assembly Name         :: EcK1420
            Genome Coverage       :: 99.5.0x
            Sequencing Technology :: Illumina HiSeq 2000; PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000618025.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:36:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,547
            CDSs (total)                      :: 5,440
            Genes (coding)                    :: 5,085
            CDSs (with protein)               :: 5,085
            Genes (RNA)                       :: 107
            rRNAs                             :: 8, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 8 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 355
            CDSs (without protein)            :: 355
            Pseudo Genes (ambiguous residues) :: 0 of 355
            Pseudo Genes (frameshifted)       :: 124 of 355
            Pseudo Genes (incomplete)         :: 213 of 355
            Pseudo Genes (internal stop)      :: 61 of 355
            Pseudo Genes (multiple problems)  :: 37 of 355
            Pseudo Genes (short protein)      :: 1 of 355
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5469015
                     /organism="Escherichia coli O157:H7 str. K1420"
                     /mol_type="genomic DNA"
                     /strain="K1420"
                     /serovar="O157:H7"
                     /db_xref="taxon:1446663"
                     /geo_loc_name="USA"
                     /collected_by="CDC"
WGS         JHJF01000001-JHJF01000091
WGS_SCAFLD  NZ_JHJF01000001-NZ_JHJF01000091
//
LOCUS       NZ_JBSWWC010000000   3929993 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Halomonas sp. ABH4_019, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWWC000000000
VERSION     NZ_JBSWWC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861959
            Assembly: GCF_056159885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Halomonas sp. ABH4_019
  ORGANISM  Halomonas sp. ABH4_019
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Halomonas.
REFERENCE   1  (bases 1 to 3929993)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWWC000000000.1.
            The Halomonas sp. ABH4_019 whole genome shotgun (WGS) project has
            the project accession NZ_JBSWWC000000000.  This version of the
            project (01) has the accession number NZ_JBSWWC010000000, and
            consists of sequences JBSWWC010000001-JBSWWC010000010.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 617x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056159885.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:18:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,667
            CDSs (total)                      :: 3,584
            Genes (coding)                    :: 3,561
            CDSs (with protein)               :: 3,561
            Genes (RNA)                       :: 83
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 23
            CDSs (without protein)            :: 23
            Pseudo Genes (ambiguous residues) :: 0 of 23
            Pseudo Genes (frameshifted)       :: 2 of 23
            Pseudo Genes (incomplete)         :: 19 of 23
            Pseudo Genes (internal stop)      :: 4 of 23
            Pseudo Genes (multiple problems)  :: 2 of 23
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3929993
                     /organism="Halomonas sp. ABH4_019"
                     /mol_type="genomic DNA"
                     /strain="ABH4_019"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477736"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWWC010000001-JBSWWC010000010
WGS_SCAFLD  NZ_JBSWWC010000001-NZ_JBSWWC010000010
//
LOCUS       NZ_JBSWWS010000000   3858466 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Halobacillus sp. ABA4_118, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWWS000000000
VERSION     NZ_JBSWWS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861940
            Assembly: GCF_056160205.1
KEYWORDS    WGS; RefSeq.
SOURCE      Halobacillus sp. ABA4_118
  ORGANISM  Halobacillus sp. ABA4_118
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Halobacillus.
REFERENCE   1  (bases 1 to 3858466)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWWS000000000.1.
            The Halobacillus sp. ABA4_118 whole genome shotgun (WGS) project
            has the project accession NZ_JBSWWS000000000.  This version of the
            project (01) has the accession number NZ_JBSWWS010000000, and
            consists of sequences JBSWWS010000001-JBSWWS010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1583x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056160205.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:33:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,965
            CDSs (total)                      :: 3,869
            Genes (coding)                    :: 3,843
            CDSs (with protein)               :: 3,843
            Genes (RNA)                       :: 96
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 7 of 26
            Pseudo Genes (incomplete)         :: 22 of 26
            Pseudo Genes (internal stop)      :: 1 of 26
            Pseudo Genes (multiple problems)  :: 4 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3858466
                     /organism="Halobacillus sp. ABA4_118"
                     /mol_type="genomic DNA"
                     /strain="ABA4_118"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477746"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWWS010000001-JBSWWS010000002
WGS_SCAFLD  NZ_JBSWWS010000001-NZ_JBSWWS010000002
//
LOCUS       NZ_JBSWZB010000000   4660939 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Heyndrickxia camelliae strain ABD4_194, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSWZB000000000
VERSION     NZ_JBSWZB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861878
            Assembly: GCF_056161425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Heyndrickxia camelliae
  ORGANISM  Heyndrickxia camelliae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Heyndrickxia.
REFERENCE   1  (bases 1 to 4660939)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWZB000000000.1.
            The Heyndrickxia camelliae whole genome shotgun (WGS) project has
            the project accession NZ_JBSWZB000000000.  This version of the
            project (01) has the accession number NZ_JBSWZB010000000, and
            consists of sequences JBSWZB010000001-JBSWZB010000061.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 224x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161425.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:11:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,722
            CDSs (total)                      :: 4,572
            Genes (coding)                    :: 4,477
            CDSs (with protein)               :: 4,477
            Genes (RNA)                       :: 150
            rRNAs                             :: 13, 11, 16 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 9, 11, 16 (5S, 16S, 23S)
            tRNAs                             :: 105
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 95
            CDSs (without protein)            :: 95
            Pseudo Genes (ambiguous residues) :: 0 of 95
            Pseudo Genes (frameshifted)       :: 47 of 95
            Pseudo Genes (incomplete)         :: 53 of 95
            Pseudo Genes (internal stop)      :: 29 of 95
            Pseudo Genes (multiple problems)  :: 28 of 95
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4660939
                     /organism="Heyndrickxia camelliae"
                     /mol_type="genomic DNA"
                     /strain="ABD4_194"
                     /isolation_source="Marine"
                     /db_xref="taxon:1707093"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-07-26"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWZB010000001-JBSWZB010000061
WGS_SCAFLD  NZ_JBSWZB010000001-NZ_JBSWZB010000061
//
LOCUS       NZ_JBSWZA010000000   3923843 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Halobacillus sp. ABD4_316, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWZA000000000
VERSION     NZ_JBSWZA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861879
            Assembly: GCF_056161385.1
KEYWORDS    WGS; RefSeq.
SOURCE      Halobacillus sp. ABD4_316
  ORGANISM  Halobacillus sp. ABD4_316
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Halobacillus.
REFERENCE   1  (bases 1 to 3923843)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWZA000000000.1.
            The Halobacillus sp. ABD4_316 whole genome shotgun (WGS) project
            has the project accession NZ_JBSWZA000000000.  This version of the
            project (01) has the accession number NZ_JBSWZA010000000, and
            consists of sequences JBSWZA010000001-JBSWZA010000030.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 320x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161385.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:58:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,105
            CDSs (total)                      :: 4,003
            Genes (coding)                    :: 3,975
            CDSs (with protein)               :: 3,975
            Genes (RNA)                       :: 102
            rRNAs                             :: 10, 9, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 5 (5S)
            partial rRNAs                     :: 5, 9, 9 (5S, 16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 5 of 28
            Pseudo Genes (incomplete)         :: 24 of 28
            Pseudo Genes (internal stop)      :: 2 of 28
            Pseudo Genes (multiple problems)  :: 3 of 28
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3923843
                     /organism="Halobacillus sp. ABD4_316"
                     /mol_type="genomic DNA"
                     /strain="ABD4_316"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477784"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-07-26"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWZA010000001-JBSWZA010000030
WGS_SCAFLD  NZ_JBSWZA010000001-NZ_JBSWZA010000030
//
LOCUS       NZ_JBWGIM010000000   1766329 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Francisella tularensis isolate 10908, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBWGIM000000000
VERSION     NZ_JBWGIM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56532690
            Assembly: GCF_056162825.1
KEYWORDS    WGS; RefSeq.
SOURCE      Francisella tularensis
  ORGANISM  Francisella tularensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Thiotrichales; Francisellaceae; Francisella.
REFERENCE   1  (bases 1 to 1766329)
  AUTHORS   Tolchkov,V., Nenova,R., Tomova,I. and Tsafarova,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2026) Microbiology, National Center of Infectious
            and Parasitic Diseases, 26 Yanko Sakazov blvd., Sofia 1505,
            Bulgaria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWGIM000000000.1.
            The Francisella tularensis whole genome shotgun (WGS) project has
            the project accession NZ_JBWGIM000000000.  This version of the
            project (01) has the accession number NZ_JBWGIM010000000, and
            consists of sequences JBWGIM010000001-JBWGIM010000103.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. SPAdes Unicycler 0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 33.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162825.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:03:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,836
            CDSs (total)                      :: 1,794
            Genes (coding)                    :: 1,557
            CDSs (with protein)               :: 1,557
            Genes (RNA)                       :: 42
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 237
            CDSs (without protein)            :: 237
            Pseudo Genes (ambiguous residues) :: 0 of 237
            Pseudo Genes (frameshifted)       :: 146 of 237
            Pseudo Genes (incomplete)         :: 45 of 237
            Pseudo Genes (internal stop)      :: 97 of 237
            Pseudo Genes (multiple problems)  :: 49 of 237
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1766329
                     /organism="Francisella tularensis"
                     /mol_type="genomic DNA"
                     /isolate="10908"
                     /isolation_source="drink water"
                     /db_xref="taxon:263"
                     /geo_loc_name="Bulgaria: Meshtitsa"
                     /lat_lon="42.67 N 23.00 E"
                     /collection_date="2003-02-19"
                     /collected_by="National Center of Infectious and Parasitic
                     Diseases"
WGS         JBWGIM010000001-JBWGIM010000103
WGS_SCAFLD  NZ_JBWGIM010000001-NZ_JBWGIM010000103
//
LOCUS       NZ_JBWGIL010000000   1765656 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Francisella tularensis subsp. holarctica isolate 151708, whole
            genome shotgun sequencing project.
ACCESSION   NZ_JBWGIL000000000
VERSION     NZ_JBWGIL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56532523
            Assembly: GCF_056162805.1
KEYWORDS    WGS; RefSeq.
SOURCE      Francisella tularensis subsp. holarctica
  ORGANISM  Francisella tularensis subsp. holarctica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Thiotrichales; Francisellaceae; Francisella.
REFERENCE   1  (bases 1 to 1765656)
  AUTHORS   Tolchkov,V., Nenova,R., Tomova,I. and Tsafarova,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2026) Microbiology, National Center of Infectious
            and Parasitic Diseases, 26 Yanko Sakazov blvd., Sofia 1505,
            Bulgaria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWGIL000000000.1.
            The Francisella tularensis subsp. holarctica whole genome shotgun
            (WGS) project has the project accession NZ_JBWGIL000000000.  This
            version of the project (01) has the accession number
            NZ_JBWGIL010000000, and consists of sequences
            JBWGIL010000001-JBWGIL010000105.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. SPAdes Unicycler 0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 31.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162805.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:03:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,837
            CDSs (total)                      :: 1,795
            Genes (coding)                    :: 1,565
            CDSs (with protein)               :: 1,565
            Genes (RNA)                       :: 42
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 230
            CDSs (without protein)            :: 230
            Pseudo Genes (ambiguous residues) :: 0 of 230
            Pseudo Genes (frameshifted)       :: 140 of 230
            Pseudo Genes (incomplete)         :: 47 of 230
            Pseudo Genes (internal stop)      :: 93 of 230
            Pseudo Genes (multiple problems)  :: 47 of 230
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1765656
                     /organism="Francisella tularensis subsp. holarctica"
                     /mol_type="genomic DNA"
                     /isolate="151708"
                     /isolation_source="Lympatic node"
                     /host="Homo sapiens"
                     /sub_species="holarctica"
                     /db_xref="taxon:119857"
                     /geo_loc_name="Bulgaria: Aldomirovtsi"
                     /lat_lon="42.85 N 22.98 E"
                     /collection_date="2003-01-28"
                     /collected_by="National Center of Infectious and Parasitic
                     Diseases"
WGS         JBWGIL010000001-JBWGIL010000105
WGS_SCAFLD  NZ_JBWGIL010000001-NZ_JBWGIL010000105
//
LOCUS       NZ_JBWGIJ010000000   1765746 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Francisella tularensis isolate 111780, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBWGIJ000000000
VERSION     NZ_JBWGIJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56531685
            Assembly: GCF_056162785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Francisella tularensis
  ORGANISM  Francisella tularensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Thiotrichales; Francisellaceae; Francisella.
REFERENCE   1  (bases 1 to 1765746)
  AUTHORS   Tolchkov,V., Nenova,R., Tomova,I. and Tsafarova,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2026) Microbiology, National Center of Infectious
            and Parasitic Diseases, 26 Yanko Sakazov blvd., Sofia 1505,
            Bulgaria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWGIJ000000000.1.
            The Francisella tularensis whole genome shotgun (WGS) project has
            the project accession NZ_JBWGIJ000000000.  This version of the
            project (01) has the accession number NZ_JBWGIJ010000000, and
            consists of sequences JBWGIJ010000001-JBWGIJ010000104.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. SPAdes Unicycler 0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 22.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162785.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:03:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,836
            CDSs (total)                      :: 1,794
            Genes (coding)                    :: 1,564
            CDSs (with protein)               :: 1,564
            Genes (RNA)                       :: 42
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 230
            CDSs (without protein)            :: 230
            Pseudo Genes (ambiguous residues) :: 0 of 230
            Pseudo Genes (frameshifted)       :: 140 of 230
            Pseudo Genes (incomplete)         :: 46 of 230
            Pseudo Genes (internal stop)      :: 94 of 230
            Pseudo Genes (multiple problems)  :: 46 of 230
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1765746
                     /organism="Francisella tularensis"
                     /mol_type="genomic DNA"
                     /isolate="111780"
                     /isolation_source="Lymphatic node"
                     /host="Homo sapiens"
                     /db_xref="taxon:263"
                     /geo_loc_name="Bulgaria: Dragoman"
                     /lat_lon="42.93 N 22.93 E"
                     /collection_date="2003-01-31"
                     /collected_by="National Center of Infectious and Parasitic
                     Diseases"
WGS         JBWGIJ010000001-JBWGIJ010000104
WGS_SCAFLD  NZ_JBWGIJ010000001-NZ_JBWGIJ010000104
//
LOCUS       NZ_JBRESF010000000   5108123 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella aerogenes strain NY1193, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBRESF000000000
VERSION     NZ_JBRESF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51751950
            Assembly: GCF_056163035.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella aerogenes
  ORGANISM  Klebsiella aerogenes
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 5108123)
  AUTHORS   Zhou,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2025) State Key Laboratory of Pathogen and
            Biosecurity, Academy of Military Medical Sciences, No. 20,
            Dongdajie, Fengtai, Beijing 100071, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRESF000000000.1.
            The Klebsiella aerogenes whole genome shotgun (WGS) project has the
            project accession NZ_JBRESF000000000.  This version of the project
            (01) has the accession number NZ_JBRESF010000000, and consists of
            sequence JBRESF010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: HGAP v. 3.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: PacBio RSII
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056163035.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:43:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,887
            CDSs (total)                      :: 4,766
            Genes (coding)                    :: 4,709
            CDSs (with protein)               :: 4,709
            Genes (RNA)                       :: 121
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 57
            CDSs (without protein)            :: 57
            Pseudo Genes (ambiguous residues) :: 0 of 57
            Pseudo Genes (frameshifted)       :: 24 of 57
            Pseudo Genes (incomplete)         :: 35 of 57
            Pseudo Genes (internal stop)      :: 4 of 57
            Pseudo Genes (multiple problems)  :: 6 of 57
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5108123
                     /organism="Klebsiella aerogenes"
                     /mol_type="genomic DNA"
                     /strain="NY1193"
                     /isolation_source="pus"
                     /host="Homo sapiens"
                     /db_xref="taxon:548"
                     /geo_loc_name="China: Chongqing"
                     /lat_lon="29.5 N 106.0 E"
                     /collection_date="2014"
WGS         JBRESF010000001
WGS_SCAFLD  NZ_CM149613
//
LOCUS       NZ_AJKS02000000      3561919 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Halomonas smyrnensis AAD6, whole genome shotgun sequencing project.
ACCESSION   NZ_AJKS00000000
VERSION     NZ_AJKS00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02470292
            Assembly: GCF_000265245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Halomonas smyrnensis AAD6
  ORGANISM  Halomonas smyrnensis AAD6
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Halomonas.
REFERENCE   1  (bases 1 to 3561919)
  AUTHORS   Sogutcu,E., Emrence,Z., Arikan,M., Cakiris,A., Abaci,N., Oner,E.T.,
            Ustek,D. and Arga,K.Y.
  TITLE     Draft genome sequence of Halomonas smyrnensis AAD6T
  JOURNAL   J Bacteriol 194 (20), 5690-5691 (2012)
   PUBMED   23012275
REFERENCE   2  (bases 1 to 3561919)
  AUTHORS   Arga,K.Y., Toksoy Oner,E., Ustek,D. and Sogutcu,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-JUN-2012) Department of Bioengineering, Marmara
            University, Goztepe, Kadikoy, Istanbul 34722, Turkey
REFERENCE   3  (bases 1 to 3561919)
  AUTHORS   Arga,K.Y., Toksoy Oner,E., Ustek,D. and Sogutcu,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-MAR-2012) Department of Bioengineering, Marmara
            University, Goztepe, Kadikoy, Istanbul 34722, Turkey
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AJKS00000000.2.
            The Halomonas smyrnensis AAD6 whole genome shotgun (WGS) project
            has the project accession NZ_AJKS00000000.  This version of the
            project (02) has the accession number NZ_AJKS02000000, and consists
            of sequences AJKS02000001-AJKS02000034.
            Bacteria and source DNA available from: Kazim Yalcin Arga,
            Department of Bioengineering, Marmara University, Goztepe, Kadikoy,
            Istanbul 34722, Turkey.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: CLC Genomic Workbench v. 20.05.2012
            Assembly Name         :: HalSmy2.0
            Long Assembly Name    :: Halomonas smyrnensis draft genome 2.0
            Genome Coverage       :: 140.0x
            Sequencing Technology :: 454; IonTorrent
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000265245.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:26:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,352
            CDSs (total)                      :: 3,283
            Genes (coding)                    :: 3,236
            CDSs (with protein)               :: 3,236
            Genes (RNA)                       :: 69
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 47
            CDSs (without protein)            :: 47
            Pseudo Genes (ambiguous residues) :: 0 of 47
            Pseudo Genes (frameshifted)       :: 17 of 47
            Pseudo Genes (incomplete)         :: 39 of 47
            Pseudo Genes (internal stop)      :: 4 of 47
            Pseudo Genes (multiple problems)  :: 10 of 47
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3561919
                     /organism="Halomonas smyrnensis AAD6"
                     /mol_type="genomic DNA"
                     /strain="AAD6"
                     /type_material="type strain of Halomonas smyrnensis"
                     /db_xref="taxon:339656"
                     /geo_loc_name="Turkey: Camalti saltern area"
WGS         AJKS02000001-AJKS02000034
WGS_SCAFLD  NZ_AJKS02000001-NZ_AJKS02000034
//
LOCUS       NZ_AVBC01000000      4758798 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Halomonas huangheensis strain BJGMM-B45, whole genome shotgun
            sequencing project.
ACCESSION   NZ_AVBC00000000
VERSION     NZ_AVBC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02469496
            Assembly: GCF_000470745.1
KEYWORDS    WGS; RefSeq.
SOURCE      Halomonas huangheensis
  ORGANISM  Halomonas huangheensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Halomonas.
REFERENCE   1  (bases 1 to 4758798)
  AUTHORS   Miao,C., Wan,Y. and Jin,W.
  TITLE     draft genome of Halomonas huanghegensis, strain BJGMM-B45T
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4758798)
  AUTHORS   Miao,C., Wan,Y. and Jin,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-AUG-2013) Biotechnology Research Institute, Chinese
            Academy of Agricultural Sciences, No. 12, Zhongguancun Nandajie,
            Haidian District, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AVBC00000000.1.
            The Halomonas huangheensis whole genome shotgun (WGS) project has
            the project accession NZ_AVBC00000000.  This version of the project
            (01) has the accession number NZ_AVBC01000000, and consists of
            sequences AVBC01000001-AVBC01000068.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Wujun Jin, Chinese Academy
            of Agricultural Sciences, No. 12, Zhongguancun Nandajie, Haidian
            District, Beijing, China.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SOAPdenovo v. 1.05
            Genome Coverage       :: 519.0x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000470745.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:11:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,219
            CDSs (total)                      :: 4,136
            Genes (coding)                    :: 4,103
            CDSs (with protein)               :: 4,103
            Genes (RNA)                       :: 83
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 4 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 33
            CDSs (without protein)            :: 33
            Pseudo Genes (ambiguous residues) :: 0 of 33
            Pseudo Genes (frameshifted)       :: 5 of 33
            Pseudo Genes (incomplete)         :: 30 of 33
            Pseudo Genes (internal stop)      :: 4 of 33
            Pseudo Genes (multiple problems)  :: 6 of 33
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4758798
                     /organism="Halomonas huangheensis"
                     /mol_type="genomic DNA"
                     /strain="BJGMM-B45"
                     /isolation_source="saline-alkali soil"
                     /type_material="type strain of Halomonas huangheensis"
                     /db_xref="taxon:1178482"
                     /geo_loc_name="China: Shandong Province"
                     /collection_date="2010-06"
                     /note="type strain of Halomonas sp.; deposited in KCTC"
WGS         AVBC01000001-AVBC01000068
WGS_SCAFLD  NZ_AVBC01000001-NZ_AVBC01000068
//
LOCUS       NZ_BEOD01000000      5569885 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli O26:H11 strain 10367, whole genome shotgun
            sequencing project.
ACCESSION   NZ_BEOD00000000
VERSION     NZ_BEOD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMD00075865
            Sequence Read Archive: DRR103522
            Assembly: GCF_002765935.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli O26:H11
  ORGANISM  Escherichia coli O26:H11
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1
  AUTHORS   Ogura,Y., Gotoh,Y. and Hayashi,T.
  TITLE     The population structure of enterohemorrhagic Escherichia coli
            O26:H11 with recent and repeated stx2 acquisition in multiple
            lineages
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5569885)
  AUTHORS   Ogura,Y. and Katsura,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-SEP-2017) Contact:Yoshitoshi Ogura Microbiology,
            Graduate School of Medical Sciences, Kyushu University; 3-1-1
            Maidashi Higashi-ku, Fukuoka, Fukuoka 812-0054, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            BEOD00000000.1.
            The Escherichia coli O26:H11 whole genome shotgun (WGS) project has
            the project accession NZ_BEOD00000000.  This version of the project
            (01) has the accession number NZ_BEOD01000000, and consists of
            sequences BEOD01000001-BEOD01000317.
            Please visit our website
            URL: https://www.bact.med.kyushu-u.ac.jp/
            
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Platanus v. 1.1.0
            Genome Coverage       :: 144.215x
            Sequencing Technology :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002765935.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:18:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,953
            CDSs (total)                      :: 5,846
            Genes (coding)                    :: 5,440
            CDSs (with protein)               :: 5,440
            Genes (RNA)                       :: 107
            rRNAs                             :: 2, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3, 2 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 406
            CDSs (without protein)            :: 406
            Pseudo Genes (ambiguous residues) :: 0 of 406
            Pseudo Genes (frameshifted)       :: 111 of 406
            Pseudo Genes (incomplete)         :: 299 of 406
            Pseudo Genes (internal stop)      :: 65 of 406
            Pseudo Genes (multiple problems)  :: 60 of 406
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5569885
                     /organism="Escherichia coli O26:H11"
                     /mol_type="genomic DNA"
                     /strain="10367"
                     /serovar="O26:H11"
                     /host="Homo sapiens"
                     /db_xref="taxon:244319"
                     /geo_loc_name="Japan:Miyazaki"
                     /collection_date="2004"
WGS         BEOD01000001-BEOD01000317
WGS_SCAFLD  NZ_BEOD01000001-NZ_BEOD01000317
//
LOCUS       NZ_ALKA01000000      1561171 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Helicobacter pylori HLJHP256, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ALKA00000000
VERSION     NZ_ALKA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02469501
            Assembly: GCF_000287735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Helicobacter pylori HLJHP256
  ORGANISM  Helicobacter pylori HLJHP256
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (bases 1 to 1561171)
  AUTHORS   You,Y., Liu,L., Zhang,M., Han,X., He,L., Zhu,Y., Ni,P. and Zhang,J.
  TITLE     Genome sequences of three Helicobacter pylori strains isolated from
            atrophic gastritis and gastric ulcer patients in China
  JOURNAL   J Bacteriol 194 (22), 6314-6315 (2012)
   PUBMED   23105058
REFERENCE   2  (bases 1 to 1561171)
  AUTHORS   Zhang,J. and Zhu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-JUL-2012) National Institute for Communicable Disease
            Control and Prevention, Chinese Center for Disease Control and
            Prevention, 155 Changbai Road, Changping, Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ALKA00000000.1.
            The Helicobacter pylori HLJHP256 whole genome shotgun (WGS) project
            has the project accession NZ_ALKA00000000.  This version of the
            project (01) has the accession number NZ_ALKA01000000, and consists
            of sequences ALKA01000001-ALKA01000040.
            Bacteria and source DNA available from: State Key Laboratory for
            Infectious Disease Prevention and Control, National Institute for
            Communicable Disease Control and Prevention, Chinese Center for
            Disease Control and Prevention, 155 Changbai Road, Changping,
            Beijing 102206, China.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SOAPdenovo v. 1.05
            Assembly Name         :: H_pylori_HLJHP256_v1.0
            Genome Coverage       :: 120.0x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000287735.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:40:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,532
            CDSs (total)                      :: 1,489
            Genes (coding)                    :: 1,405
            CDSs (with protein)               :: 1,405
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 36
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 84
            CDSs (without protein)            :: 84
            Pseudo Genes (ambiguous residues) :: 0 of 84
            Pseudo Genes (frameshifted)       :: 52 of 84
            Pseudo Genes (incomplete)         :: 33 of 84
            Pseudo Genes (internal stop)      :: 14 of 84
            Pseudo Genes (multiple problems)  :: 14 of 84
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1561171
                     /organism="Helicobacter pylori HLJHP256"
                     /mol_type="genomic DNA"
                     /strain="HLJHP256"
                     /isolation_source="gastric mucosa"
                     /host="Homo sapiens"
                     /db_xref="taxon:1214221"
                     /geo_loc_name="China"
                     /collection_date="2006-02"
WGS         ALKA01000001-ALKA01000040
WGS_SCAFLD  NZ_ALKA01000030-NZ_ALKA01000040
WGS_SCAFLD  NZ_JH791469-NZ_JH791471
//
LOCUS       NZ_JWIF01000000      3535512 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Halocynthiibacter namhaensis strain RA2-3, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JWIF00000000
VERSION     NZ_JWIF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03254441
            Assembly: GCF_000812685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Halocynthiibacter namhaensis
  ORGANISM  Halocynthiibacter namhaensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Halocynthiibacter.
REFERENCE   1  (bases 1 to 3535512)
  AUTHORS   Kim,Y.O., Park,S., Kim,H., Park,D.S., Nam,B.H., Kim,D.G. and
            Yoon,J.H.
  TITLE     Halocynthiibacter namhaensis gen. nov., sp. nov., a novel
            alphaproteobacterium isolated from sea squirt Halocynthia roretzi
  JOURNAL   Antonie Van Leeuwenhoek 105 (5), 881-889 (2014)
   PUBMED   24573327
REFERENCE   2  (bases 1 to 3535512)
  AUTHORS   Baek,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-DEC-2014) KOPRI, Korea Polar Research Institute, 26
            Songdomirae-ro, Yeonsu-gu, Incheon 406-840, South Korea
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JWIF00000000.1.
            The Halocynthiibacter namhaensis whole genome shotgun (WGS) project
            has the project accession NZ_JWIF00000000.  This version of the
            project (01) has the accession number NZ_JWIF01000000, and consists
            of sequences JWIF01000001-JWIF01000074.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. DEC-2014
            Assembly Name          :: S20958
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 12.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000812685.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:25:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,591
            CDSs (total)                      :: 3,544
            Genes (coding)                    :: 3,441
            CDSs (with protein)               :: 3,441
            Genes (RNA)                       :: 47
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 103
            CDSs (without protein)            :: 103
            Pseudo Genes (ambiguous residues) :: 0 of 103
            Pseudo Genes (frameshifted)       :: 52 of 103
            Pseudo Genes (incomplete)         :: 51 of 103
            Pseudo Genes (internal stop)      :: 10 of 103
            Pseudo Genes (multiple problems)  :: 10 of 103
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3535512
                     /organism="Halocynthiibacter namhaensis"
                     /mol_type="genomic DNA"
                     /strain="RA2-3"
                     /host="Halocynthia roretzi (sea squirt)"
                     /type_material="type strain of Halocynthiibacter
                     namhaensis"
                     /db_xref="taxon:1290553"
                     /geo_loc_name="South Korea: Namhae"
                     /collection_date="2014-12-01"
WGS         JWIF01000001-JWIF01000074
WGS_SCAFLD  NZ_JWIF01000001-NZ_JWIF01000074
//
LOCUS       NZ_ALKB01000000      1571832 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Helicobacter pylori HLJHP271, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ALKB00000000
VERSION     NZ_ALKB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02469502
            Assembly: GCF_000287755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Helicobacter pylori HLJHP271
  ORGANISM  Helicobacter pylori HLJHP271
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (bases 1 to 1571832)
  AUTHORS   You,Y., Liu,L., Zhang,M., Han,X., He,L., Zhu,Y., Ni,P. and Zhang,J.
  TITLE     Genome sequences of three Helicobacter pylori strains isolated from
            atrophic gastritis and gastric ulcer patients in China
  JOURNAL   J Bacteriol 194 (22), 6314-6315 (2012)
   PUBMED   23105058
REFERENCE   2  (bases 1 to 1571832)
  AUTHORS   Zhang,J. and Zhu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-JUL-2012) National Institute for Communicable Disease
            Control and Prevention, Chinese Center for Disease Control and
            Prevention, 155 Changbai Road, Changping, Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ALKB00000000.1.
            The Helicobacter pylori HLJHP271 whole genome shotgun (WGS) project
            has the project accession NZ_ALKB00000000.  This version of the
            project (01) has the accession number NZ_ALKB01000000, and consists
            of sequences ALKB01000001-ALKB01000043.
            Bacteria and source DNA available from: State Key Laboratory for
            Infectious Disease Prevention and Control, National Institute for
            Communicable Disease Control and Prevention, Chinese Center for
            Disease Control and Prevention, 155 Changbai Road, Changping,
            Beijing 102206, China.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SOAPdenovo v. 1.05
            Assembly Name         :: H_pylori_HLJHP271_v1.0
            Genome Coverage       :: 120.0x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000287755.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:42:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,575
            CDSs (total)                      :: 1,533
            Genes (coding)                    :: 1,433
            CDSs (with protein)               :: 1,433
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 36
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 67 of 100
            Pseudo Genes (incomplete)         :: 45 of 100
            Pseudo Genes (internal stop)      :: 15 of 100
            Pseudo Genes (multiple problems)  :: 23 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1571832
                     /organism="Helicobacter pylori HLJHP271"
                     /mol_type="genomic DNA"
                     /strain="HLJHP271"
                     /isolation_source="gastric mucosa"
                     /host="Homo sapiens"
                     /db_xref="taxon:1214222"
                     /geo_loc_name="China"
                     /collection_date="2006-02"
WGS         ALKB01000001-ALKB01000043
WGS_SCAFLD  NZ_ALKB01000035-NZ_ALKB01000043
WGS_SCAFLD  NZ_JH791472-NZ_JH791473
//
LOCUS       NZ_ALJI01000000      1552322 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Helicobacter pylori HLJHP193, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ALJI00000000
VERSION     NZ_ALJI00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02469498
            Assembly: GCF_000287835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Helicobacter pylori HLJHP193
  ORGANISM  Helicobacter pylori HLJHP193
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (bases 1 to 1552322)
  AUTHORS   You,Y., Liu,L., Zhang,M., Han,X., He,L., Zhu,Y., Ni,P. and Zhang,J.
  TITLE     Genome sequences of three Helicobacter pylori strains isolated from
            atrophic gastritis and gastric ulcer patients in China
  JOURNAL   J Bacteriol 194 (22), 6314-6315 (2012)
   PUBMED   23105058
REFERENCE   2  (bases 1 to 1552322)
  AUTHORS   Zhang,J. and Zhu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUL-2012) National Institute for Communicable Disease
            Control and Prevention, Chinese Center for Disease Control and
            Prevention, 155 Changbai Road, Changping, Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ALJI00000000.1.
            The Helicobacter pylori HLJHP193 whole genome shotgun (WGS) project
            has the project accession NZ_ALJI00000000.  This version of the
            project (01) has the accession number NZ_ALJI01000000, and consists
            of sequences ALJI01000001-ALJI01000055.
            Bacteria and source DNA available from: State Key Laboratory for
            Infectious Disease Prevention and Control, National Institute for
            Communicable Disease Control and Prevention, Chinese Center for
            Disease Control and Prevention, 155 Changbai Road, Changping,
            Beijing 102206, China.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SOAPdenovo v. 1.05
            Genome Coverage       :: 120.0x
            Sequencing Technology :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000287835.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:44:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,543
            CDSs (total)                      :: 1,502
            Genes (coding)                    :: 1,408
            CDSs (with protein)               :: 1,408
            Genes (RNA)                       :: 41
            rRNAs                             :: 1, 1 (5S, 16S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 36
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 94
            CDSs (without protein)            :: 94
            Pseudo Genes (ambiguous residues) :: 0 of 94
            Pseudo Genes (frameshifted)       :: 52 of 94
            Pseudo Genes (incomplete)         :: 46 of 94
            Pseudo Genes (internal stop)      :: 14 of 94
            Pseudo Genes (multiple problems)  :: 17 of 94
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1552322
                     /organism="Helicobacter pylori HLJHP193"
                     /mol_type="genomic DNA"
                     /strain="HLJHP193"
                     /isolation_source="gastric mucosa"
                     /host="Homo sapiens"
                     /db_xref="taxon:1213457"
                     /geo_loc_name="China"
                     /collection_date="2006-02"
WGS         ALJI01000001-ALJI01000055
WGS_SCAFLD  NZ_ALJI01000050-NZ_ALJI01000055
WGS_SCAFLD  NZ_JH791774-NZ_JH791777
//
LOCUS       NZ_CBSM010000000     1917256 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Kingella kingae KK274, whole genome shotgun sequencing project.
ACCESSION   NZ_CBSM000000000
VERSION     NZ_CBSM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA2272032
            Assembly: GCF_000470595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kingella kingae KK274
  ORGANISM  Kingella kingae KK274
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Kingella.
REFERENCE   1
  AUTHORS   Rouli,L., Yagupsky,P., Robert,C. and Raoult,D.
  TITLE     Pan-genome of Kingella kingae shows a lack of correlation between
            strains and pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1917256)
  AUTHORS   GENOMES,U.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUN-2013) Fac de medecine, URMITE, 27 Bd J Moulin,
            13385 Marseille Cedex 05, FRANCE
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBSM000000000.1.
            The Kingella kingae KK274 whole genome shotgun (WGS) project has
            the project accession NZ_CBSM000000000.  This version of the
            project (01) has the accession number NZ_CBSM010000000, and
            consists of sequences CBSM010000001-CBSM010000339.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000470595.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:59:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,087
            CDSs (total)                      :: 2,033
            Genes (coding)                    :: 1,857
            CDSs (with protein)               :: 1,857
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 176
            CDSs (without protein)            :: 176
            Pseudo Genes (ambiguous residues) :: 0 of 176
            Pseudo Genes (frameshifted)       :: 82 of 176
            Pseudo Genes (incomplete)         :: 91 of 176
            Pseudo Genes (internal stop)      :: 21 of 176
            Pseudo Genes (multiple problems)  :: 17 of 176
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1917256
                     /organism="Kingella kingae KK274"
                     /mol_type="genomic DNA"
                     /strain="KK274"
                     /db_xref="taxon:1305595"
WGS         CBSM010000001-CBSM010000339
WGS_SCAFLD  NZ_HG427448
//
LOCUS       NZ_CBRN010000000     1918285 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Kingella kingae KK101, whole genome shotgun sequencing project.
ACCESSION   NZ_CBRN000000000
VERSION     NZ_CBRN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA2272086
            Assembly: GCF_000477375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kingella kingae KK101
  ORGANISM  Kingella kingae KK101
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Kingella.
REFERENCE   1
  AUTHORS   Rouli,L., Yagupsky,P., Robert,C. and Raoult,D.
  TITLE     Pan-genome of Kingella kingae shows a lack of correlation between
            strains and pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1918285)
  AUTHORS   GENOMES,U.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUN-2013) Fac de medecine, URMITE, 27 Bd J Moulin,
            13385 Marseille Cedex 05, FRANCE
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBRN000000000.1.
            The Kingella kingae KK101 whole genome shotgun (WGS) project has
            the project accession NZ_CBRN000000000.  This version of the
            project (01) has the accession number NZ_CBRN010000000, and
            consists of sequences CBRN010000001-CBRN010000320.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000477375.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:00:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,118
            CDSs (total)                      :: 2,064
            Genes (coding)                    :: 1,876
            CDSs (with protein)               :: 1,876
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 188
            CDSs (without protein)            :: 188
            Pseudo Genes (ambiguous residues) :: 0 of 188
            Pseudo Genes (frameshifted)       :: 73 of 188
            Pseudo Genes (incomplete)         :: 113 of 188
            Pseudo Genes (internal stop)      :: 20 of 188
            Pseudo Genes (multiple problems)  :: 18 of 188
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1918285
                     /organism="Kingella kingae KK101"
                     /mol_type="genomic DNA"
                     /strain="KK101"
                     /db_xref="taxon:1305590"
WGS         CBRN010000001-CBRN010000320
WGS_SCAFLD  NZ_HG424696
//
LOCUS       NZ_CBQR020000000     5546433 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Gorillibacterium massiliense strain G5, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CBQR000000000
VERSION     NZ_CBQR000000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA2272737
            Assembly: GCF_000455485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Gorillibacterium massiliense
  ORGANISM  Gorillibacterium massiliense
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Gorillibacterium.
REFERENCE   1
  AUTHORS   Keita,M.B., Caputo,A., Robert,C., Raoult,D., Fournier,P.E. and
            Bittar,F.
  TITLE     Non contiguous-finished genome sequence and description of Gorillea
            massiliensis gen. nov., sp. nov., a new member of the family
            Paenibacillaceae
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5546433)
  AUTHORS   GENOMES,U.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-SEP-2013) Fac de medecine, URMITE, 27 Bd J Moulin,
            13385 Marseille Cedex 05, FRANCE
REFERENCE   3  (bases 1 to 5546433)
  AUTHORS   GENOMES,U.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JUN-2013) Fac de medecine, URMITE, 27 Bd J Moulin,
            13385 Marseille Cedex 05, FRANCE
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBQR000000000.2.
            The Gorillibacterium massiliense whole genome shotgun (WGS) project
            has the project accession NZ_CBQR000000000.  This version of the
            project (02) has the accession number NZ_CBQR020000000, and
            consists of sequences CBQR020000001-CBQR020000189.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000455485.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:34:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,206
            CDSs (total)                      :: 5,127
            Genes (coding)                    :: 5,027
            CDSs (with protein)               :: 5,027
            Genes (RNA)                       :: 79
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 68
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 37 of 100
            Pseudo Genes (incomplete)         :: 63 of 100
            Pseudo Genes (internal stop)      :: 9 of 100
            Pseudo Genes (multiple problems)  :: 7 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5546433
                     /organism="Gorillibacterium massiliense"
                     /mol_type="genomic DNA"
                     /strain="G5"
                     /type_material="type strain of Gorillibacterium
                     massiliense"
                     /db_xref="taxon:1280390"
WGS         CBQR020000001-CBQR020000189
WGS_SCAFLD  NZ_CBQR020000001-NZ_CBQR020000189
//
LOCUS       NZ_ATUV01000000      1749386 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Hippea alviniae EP5-r, whole genome shotgun sequencing project.
ACCESSION   NZ_ATUV00000000
VERSION     NZ_ATUV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02440906
            Assembly: GCF_000420385.1
KEYWORDS    WGS; IMPROVED_HIGH_QUALITY_DRAFT; RefSeq.
SOURCE      Hippea alviniae EP5-r
  ORGANISM  Hippea alviniae EP5-r
            Bacteria; Pseudomonadati; Campylobacterota; Desulfurellia;
            Desulfurellales; Hippeaceae; Hippea.
REFERENCE   1  (bases 1 to 1749386)
  AUTHORS   Reysenbach,A.-L., Huntemann,M., Han,J., Chen,A., Kyrpides,N.,
            Mavromatis,K., Markowitz,V., Palaniappan,K., Ivanova,N.,
            Schaumberg,A., Pati,A., Liolios,K., Nordberg,H.P., Cantor,M.N.,
            Hua,S.X. and Woyke,T.
  CONSRTM   DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JUL-2013) DOE Joint Genome Institute, 2800 Mitchell
            Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ATUV00000000.1.
            The Hippea alviniae EP5-r whole genome shotgun (WGS) project has
            the project accession NZ_ATUV00000000.  This version of the project
            (01) has the accession number NZ_ATUV01000000, and consists of
            sequences ATUV01000001-ATUV01000004.
            URL -- http://www.jgi.doe.gov
            JGI Project ID: 1007521
            Source DNA and Organism available from Anna-Louise   Reysenbach
            (reysenbacha@pdx.edu)
            Source DNA available from Anna-Louise   Reysenbach
            (reysenbacha@pdx.edu)
            Organism available from Anna-Louise   Reysenbach
            (reysenbacha@pdx.edu)
            Contacts: Anna-Louise   Reysenbach (reysenbacha@pdx.edu)
                      Tanja Woyke (microbe@cuba.jgi-psf.org)
            Whole genome sequencing and draft assembly at JGI-PGF
            Annotation by JGI-ORNL
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376)
            Full annotations are available from IMG.
            
            ##MIGS-Data-START##
            environment        :: Aquatic; Hot spring; Hydrothermal vent
            investigation_type :: bacteria_archaea
            project_name       :: Hippea alviniae EP5-r, DSM 24586
            sequencing_meth    :: WGS
            ref_biomaterial    :: DSM 24586
            GOLD Stamp ID      :: Gi14057
            Type Strain        :: Yes
            Funding Program    :: DOE-CSP 2011
            Isolation Site     :: hydrothermal vent deposit
            Gram Staining      :: Gram-
            ##MIGS-Data-END##
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: Improved High-Quality Draft
            Current Finishing Status :: Improved High-Quality Draft
            Assembly Method          :: Unknown program v. before 2013-02-25
            Genome Coverage          :: Unknown
            Sequencing Technology    :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000420385.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:03:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,824
            CDSs (total)                      :: 1,766
            Genes (coding)                    :: 1,753
            CDSs (with protein)               :: 1,753
            Genes (RNA)                       :: 58
            rRNAs                             :: 3, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 23S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 6 of 13
            Pseudo Genes (incomplete)         :: 6 of 13
            Pseudo Genes (internal stop)      :: 5 of 13
            Pseudo Genes (multiple problems)  :: 4 of 13
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1749386
                     /organism="Hippea alviniae EP5-r"
                     /mol_type="genomic DNA"
                     /strain="EP5-r"
                     /type_material="type strain of Hippea alviniae"
                     /db_xref="taxon:944480"
WGS         ATUV01000001-ATUV01000004
WGS_SCAFLD  NZ_ATUV01000001-NZ_ATUV01000004
//
LOCUS       NZ_CBSP010000000     1896321 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Kingella kingae PV1748, whole genome shotgun sequencing project.
ACCESSION   NZ_CBSP000000000
VERSION     NZ_CBSP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA2272527
            Assembly: GCF_000470175.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kingella kingae PV1748
  ORGANISM  Kingella kingae PV1748
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Kingella.
REFERENCE   1
  AUTHORS   Rouli,L., Yagupsky,P., Robert,C. and Raoult,D.
  TITLE     Pan-genome of Kingella kingae shows a lack of correlation between
            strains and pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1896321)
  AUTHORS   GENOMES,U.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUN-2013) Fac de medecine, URMITE, 27 Bd J Moulin,
            13385 Marseille Cedex 05, FRANCE
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBSP000000000.1.
            The Kingella kingae PV1748 whole genome shotgun (WGS) project has
            the project accession NZ_CBSP000000000.  This version of the
            project (01) has the accession number NZ_CBSP010000000, and
            consists of sequences CBSP010000001-CBSP010000723.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000470175.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:02:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,025
            CDSs (total)                      :: 1,973
            Genes (coding)                    :: 1,831
            CDSs (with protein)               :: 1,831
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 142
            CDSs (without protein)            :: 142
            Pseudo Genes (ambiguous residues) :: 0 of 142
            Pseudo Genes (frameshifted)       :: 57 of 142
            Pseudo Genes (incomplete)         :: 94 of 142
            Pseudo Genes (internal stop)      :: 17 of 142
            Pseudo Genes (multiple problems)  :: 26 of 142
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1896321
                     /organism="Kingella kingae PV1748"
                     /mol_type="genomic DNA"
                     /strain="PV1748"
                     /db_xref="taxon:1305795"
WGS         CBSP010000001-CBSP010000723
WGS_SCAFLD  NZ_HG427487
//
LOCUS       NZ_LFDL01000000      1847224 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Haemophilus influenzae strain HI1426, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LFDL00000000
VERSION     NZ_LFDL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03702704
            Assembly: GCF_001184595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Haemophilus influenzae
  ORGANISM  Haemophilus influenzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Haemophilus.
REFERENCE   1  (bases 1 to 1847224)
  AUTHORS   Whitby,P.W., Seale,T.W., Morton,D.J. and Stull,T.L.
  TITLE     Antisera Against Certain Conserved Surface-Exposed Peptides of
            Nontypeable Haemophilus influenzae Are Protective
  JOURNAL   PLoS One 10 (9), e0136867 (2015)
   PUBMED   26390432
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1847224)
  AUTHORS   VanWagoner,T.M., Musa,H., Whitby,P.W., Morton,D.J., Seale,T.W. and
            Stull,T.L.
  TITLE     Genome sequences of invasive non-typeable Haemophilus influenzae
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 1847224)
  AUTHORS   VanWagoner,T.M., Musa,H., Whitby,P.W., Morton,D.J., Seale,T.W. and
            Stull,T.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JUN-2015) Pediatrics/OCTSI, University of Oklahoma
            Health Sciences Center, 1000 N. Lincoln Blvd, Oklahoma City, OK
            73107, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LFDL00000000.1.
            The Haemophilus influenzae whole genome shotgun (WGS) project has
            the project accession NZ_LFDL00000000.  This version of the project
            (01) has the accession number NZ_LFDL01000000, and consists of
            sequences LFDL01000001-LFDL01000018.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 4.2.1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 575.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001184595.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:44:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,860
            CDSs (total)                      :: 1,802
            Genes (coding)                    :: 1,752
            CDSs (with protein)               :: 1,752
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 42 of 50
            Pseudo Genes (internal stop)      :: 8 of 50
            Pseudo Genes (multiple problems)  :: 10 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1847224
                     /organism="Haemophilus influenzae"
                     /mol_type="genomic DNA"
                     /strain="HI1426"
                     /isolation_source="CSF"
                     /host="Homo sapiens"
                     /db_xref="taxon:727"
                     /geo_loc_name="USA: Minnesota"
WGS         LFDL01000001-LFDL01000018
WGS_SCAFLD  NZ_LFDL01000001-NZ_LFDL01000018
//
LOCUS       NZ_AIBZ01000000      4664108 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli C844_97, whole genome shotgun sequencing project.
ACCESSION   NZ_AIBZ00000000
VERSION     NZ_AIBZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02435913
            Assembly: GCF_000410675.2
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli C844_97
  ORGANISM  Escherichia coli C844_97
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4664108)
  AUTHORS   Hazen,T.H., Sahl,J.W., Fraser,C.M., Donnenberg,M.S., Scheutz,F. and
            Rasko,D.A.
  TITLE     Draft Genome Sequences of Three O157 Enteropathogenic Escherichia
            coli Isolates
  JOURNAL   Genome Announc 1 (4), e00516-13 (2013)
   PUBMED   23868135
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4664108)
  AUTHORS   Hazen,T.H., Sahl,J.W. and Rasko,D.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-JAN-2012) Institute for Genome Sciences, University
            of Maryland School of Medicine, 801 West Baltimore Street, Suite
            619, Baltimore, MD 21201, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AIBZ00000000.1.
            
            On Nov 9, 2015 this sequence version replaced gi:511644150.
            The Escherichia coli C844_97 whole genome shotgun (WGS) project has
            the project accession NZ_AIBZ00000000.  This version of the project
            (01) has the accession number NZ_AIBZ01000000, and consists of
            sequences AIBZ01000100-AIBZ01000117.
            Source DNA available from Dr. David Rasko, University of Maryland
            School of Medicine, 801 West Baltimore Street, Baltimore, MD,
            21201.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.1.04
            Genome Coverage       :: 351x
            Sequencing Technology :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000410675.2-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:15:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,641
            CDSs (total)                      :: 4,567
            Genes (coding)                    :: 4,395
            CDSs (with protein)               :: 4,395
            Genes (RNA)                       :: 74
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 63
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 172
            CDSs (without protein)            :: 172
            Pseudo Genes (ambiguous residues) :: 0 of 172
            Pseudo Genes (frameshifted)       :: 65 of 172
            Pseudo Genes (incomplete)         :: 118 of 172
            Pseudo Genes (internal stop)      :: 37 of 172
            Pseudo Genes (multiple problems)  :: 40 of 172
            Pseudo Genes (short protein)      :: 2 of 172
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4664108
                     /organism="Escherichia coli C844_97"
                     /mol_type="genomic DNA"
                     /strain="C844_97"
                     /isolation_source="stool sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1126932"
                     /geo_loc_name="Japan"
WGS         AIBZ01000001-AIBZ01000098
WGS         AIBZ01000100-AIBZ01000117
WGS_SCAFLD  NZ_AIBZ01000001-NZ_AIBZ01000098
WGS_SCAFLD  NZ_AIBZ01000100-NZ_AIBZ01000117
//
LOCUS       NZ_ALWV01000000      1644275 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Helicobacter pylori Sahul64, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ALWV00000000
VERSION     NZ_ALWV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02597453
            Assembly: GCF_000513515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Helicobacter pylori Sahul64
  ORGANISM  Helicobacter pylori Sahul64
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (bases 1 to 1644275)
  AUTHORS   Lu,W., Wise,M.J., Tay,C.Y., Windsor,H.M., Marshall,B.J., Peacock,C.
            and Perkins,T.
  TITLE     Comparative analysis of the full genome of Helicobacter pylori
            isolate Sahul64 identifies genes of high divergence
  JOURNAL   J Bacteriol 196 (5), 1073-1083 (2014)
   PUBMED   24375107
REFERENCE   2  (bases 1 to 1644275)
  AUTHORS   Lu,W., Peacock,C., Perkins,T., Tay,C.Y. and Marshall,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-AUG-2012) School of Pathology and Laboratory
            Medicine, The University of Western Australia, 35 Stirling Hwy,
            Crawley, Western Australia 6009, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ALWV00000000.1.
            The Helicobacter pylori Sahul64 whole genome shotgun (WGS) project
            has the project accession NZ_ALWV00000000.  This version of the
            project (01) has the accession number NZ_ALWV01000000, and consists
            of sequences ALWV01000001-ALWV01000054.
            Bacteria and source DNA available from Helicobacter Research Lab,
            The University of Western Australia, 35 Stirling Hwy, Crawley,
            Western Australia 6009, Australia.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.05
            Genome Coverage       :: 100.0x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000513515.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:58:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,606
            CDSs (total)                      :: 1,564
            Genes (coding)                    :: 1,454
            CDSs (with protein)               :: 1,454
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 36
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 110
            CDSs (without protein)            :: 110
            Pseudo Genes (ambiguous residues) :: 0 of 110
            Pseudo Genes (frameshifted)       :: 59 of 110
            Pseudo Genes (incomplete)         :: 45 of 110
            Pseudo Genes (internal stop)      :: 17 of 110
            Pseudo Genes (multiple problems)  :: 11 of 110
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1644275
                     /organism="Helicobacter pylori Sahul64"
                     /mol_type="genomic DNA"
                     /strain="Sahul64"
                     /isolation_source="biopsy from indigenous Australian"
                     /host="Homo sapiens"
                     /db_xref="taxon:1222003"
                     /geo_loc_name="Australia: Western Australia"
                     /collection_date="1999"
WGS         ALWV01000001-ALWV01000054
WGS_SCAFLD  NZ_ALWV01000001-NZ_ALWV01000054
//
LOCUS       NZ_CBSR010000000     1879993 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Kingella kingae KK60, whole genome shotgun sequencing project.
ACCESSION   NZ_CBSR000000000
VERSION     NZ_CBSR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA2271998
            Assembly: GCF_000470575.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kingella kingae KK60
  ORGANISM  Kingella kingae KK60
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Kingella.
REFERENCE   1
  AUTHORS   Rouli,L., Yagupsky,P., Robert,C. and Raoult,D.
  TITLE     Pan-genome of Kingella kingae shows a lack of correlation between
            strains and pathogenicity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1879993)
  AUTHORS   GENOMES,U.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUN-2013) Fac de medecine, URMITE, 27 Bd J Moulin,
            13385 Marseille Cedex 05, FRANCE
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBSR000000000.1.
            The Kingella kingae KK60 whole genome shotgun (WGS) project has the
            project accession NZ_CBSR000000000.  This version of the project
            (01) has the accession number NZ_CBSR010000000, and consists of
            sequences CBSR010000001-CBSR010001037.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000470575.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:08:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,937
            CDSs (total)                      :: 1,886
            Genes (coding)                    :: 1,749
            CDSs (with protein)               :: 1,749
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 137
            CDSs (without protein)            :: 137
            Pseudo Genes (ambiguous residues) :: 0 of 137
            Pseudo Genes (frameshifted)       :: 65 of 137
            Pseudo Genes (incomplete)         :: 75 of 137
            Pseudo Genes (internal stop)      :: 15 of 137
            Pseudo Genes (multiple problems)  :: 17 of 137
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1879993
                     /organism="Kingella kingae KK60"
                     /mol_type="genomic DNA"
                     /strain="KK60"
                     /db_xref="taxon:1305775"
WGS         CBSR010000001-CBSR010001037
WGS_SCAFLD  NZ_HG427763
//
LOCUS       NZ_JYCF01000000      3513570 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Geobacillus kaustophilus strain Et2/3, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JYCF00000000
VERSION     NZ_JYCF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03025779
            Assembly: GCF_000948165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Geobacillus kaustophilus
  ORGANISM  Geobacillus kaustophilus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Anoxybacillaceae; Geobacillus; Geobacillus thermoleovorans group.
REFERENCE   1  (bases 1 to 3513570)
  AUTHORS   Filippidou,S., Jeanneret,N., Russel-Delif,L., Junier,T.,
            Wunderlin,T., Molina,V., Johnson,S.L., Davenport,K.W., Chain,P.S.,
            Dorador,C. and Junier,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-DEC-2014) BioScience B11, Los Alamos National
            Laboratory, PO Box 1663 M888, Los Alamos, NM 87544, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JYCF00000000.1.
            The Geobacillus kaustophilus whole genome shotgun (WGS) project has
            the project accession NZ_JYCF00000000.  This version of the project
            (01) has the accession number NZ_JYCF01000000, and consists of
            sequences JYCF01000001-JYCF01000142.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 14-MAR-2013
            Assembly Method        :: Velvet v. 1.2.08
            Assembly Name          :: BFA_3_A
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 480.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000948165.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:44:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,743
            CDSs (total)                      :: 3,668
            Genes (coding)                    :: 3,522
            CDSs (with protein)               :: 3,522
            Genes (RNA)                       :: 75
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 65
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 146
            CDSs (without protein)            :: 146
            Pseudo Genes (ambiguous residues) :: 0 of 146
            Pseudo Genes (frameshifted)       :: 46 of 146
            Pseudo Genes (incomplete)         :: 113 of 146
            Pseudo Genes (internal stop)      :: 15 of 146
            Pseudo Genes (multiple problems)  :: 27 of 146
            CRISPR Arrays                     :: 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3513570
                     /organism="Geobacillus kaustophilus"
                     /mol_type="genomic DNA"
                     /strain="Et2/3"
                     /isolation_source="Water"
                     /db_xref="taxon:1462"
                     /geo_loc_name="Chile: El Tatio"
                     /collection_date="2011-05-09"
WGS         JYCF01000001-JYCF01000142
WGS_SCAFLD  NZ_JYCF01000001-NZ_JYCF01000142
//
LOCUS       NZ_JMIU01000000      2532747 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Hydrogenovibrio marinus strain MH-110, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JMIU00000000
VERSION     NZ_JMIU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02738237
            Assembly: GCF_000696325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Hydrogenovibrio marinus
  ORGANISM  Hydrogenovibrio marinus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.
REFERENCE   1  (bases 1 to 2532747)
  AUTHORS   Cha,H.J., Jo,B.H. and Hwang,B.H.
  TITLE     Draft genome sequence of Hydrogenovibrio marinus MH-110, a model
            organism for aerobic H2 metabolism
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2532747)
  AUTHORS   Cha,H.J., Jo,B.H. and Hwang,B.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-APR-2014) Chem. Eng., Pohang University of Science
            and Technology, 77 Cheongam-Ro, Nam-Gu, Pohang, Gyeongbuk 790-784,
            Republic of Korea
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JMIU00000000.1.
            The Hydrogenovibrio marinus whole genome shotgun (WGS) project has
            the project accession NZ_JMIU00000000.  This version of the project
            (01) has the accession number NZ_JMIU01000000, and consists of
            sequences JMIU01000001-JMIU01000005.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Newbler v. 2.5.3
            Assembly Name          :: HydMar1.0
            Expected Final Version :: Yes
            Genome Coverage        :: 170.0x
            Sequencing Technology  :: 454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000696325.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:10:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,510
            CDSs (total)                      :: 2,468
            Genes (coding)                    :: 2,455
            CDSs (with protein)               :: 2,455
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 36
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 0 of 13
            Pseudo Genes (incomplete)         :: 13 of 13
            Pseudo Genes (internal stop)      :: 0 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2532747
                     /organism="Hydrogenovibrio marinus"
                     /mol_type="genomic DNA"
                     /strain="MH-110"
                     /isolation_source="Coastal sea water"
                     /type_material="type strain of Hydrogenovibrio marinus"
                     /db_xref="taxon:28885"
                     /geo_loc_name="Japan"
                     /collection_date="1989"
WGS         JMIU01000001-JMIU01000005
WGS_SCAFLD  NZ_JMIU01000001-NZ_JMIU01000005
//
LOCUS       NZ_JXYJ01000000      1809871 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Haemophilus influenzae strain Fi176, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JXYJ00000000
VERSION     NZ_JXYJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03325922
            Assembly: GCF_004327565.1
KEYWORDS    WGS; RefSeq.
SOURCE      Haemophilus influenzae
  ORGANISM  Haemophilus influenzae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Haemophilus.
REFERENCE   1  (bases 1 to 1809871)
  AUTHORS   De Chiara,M., Hood,D., Muzzi,A., Pickard,D.J., Perkins,T.,
            Pizza,M., Dougan,G., Rappuoli,R., Moxon,E.R., Soriani,M. and
            Donati,C.
  TITLE     Genome sequencing of disease and carriage isolates of nontypeable
            Haemophilus influenzae identifies discrete population structure
  JOURNAL   Proc Natl Acad Sci U S A 111 (14), 5439-5444 (2014)
   PUBMED   24706866
REFERENCE   2  (bases 1 to 1809871)
  AUTHORS   De Chiara,M., Hood,D., Muzzi,A., Pickard,D.J., Perkins,T.,
            Pizza,M., Dougan,G., Rappuoli,R., Moxon,R.E., Soriani,M. and
            Donati,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-FEB-2015) Research, Novartis Vaccines, Via Fiorentina
            1, Siena, SI 53100, Italy
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JXYJ00000000.1.
            The Haemophilus influenzae whole genome shotgun (WGS) project has
            the project accession NZ_JXYJ00000000.  This version of the project
            (01) has the accession number NZ_JXYJ01000000, and consists of
            sequences JXYJ01000001-JXYJ01000032.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2012
            Assembly Method        :: Celera Assembler v. 7.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 60.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004327565.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:45:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,798
            CDSs (total)                      :: 1,734
            Genes (coding)                    :: 1,658
            CDSs (with protein)               :: 1,658
            Genes (RNA)                       :: 64
            rRNAs                             :: 7, 5, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 7 (5S)
            partial rRNAs                     :: 5, 4 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 31 of 76
            Pseudo Genes (incomplete)         :: 53 of 76
            Pseudo Genes (internal stop)      :: 13 of 76
            Pseudo Genes (multiple problems)  :: 14 of 76
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1809871
                     /organism="Haemophilus influenzae"
                     /mol_type="genomic DNA"
                     /strain="Fi176"
                     /serotype="NT"
                     /isolation_source="liquor"
                     /host="Homo sapiens"
                     /db_xref="taxon:727"
                     /geo_loc_name="Finland"
                     /lat_lon="60.2 N 24.9 E"
                     /collection_date="1995"
                     /collected_by="John Radcliffe Hospital, Headington,
                     Oxford, OX3 9DU, UK"
WGS         JXYJ01000001-JXYJ01000032
WGS_SCAFLD  NZ_JXYJ01000001-NZ_JXYJ01000032
//
LOCUS       NZ_CCAE010000000     5288135 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Hydrogenophaga intermedia strain S1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CCAE000000000
VERSION     NZ_CCAE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA3139028
            Assembly: GCF_000723405.1
KEYWORDS    WGS; RefSeq.
SOURCE      Hydrogenophaga intermedia
  ORGANISM  Hydrogenophaga intermedia
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Hydrogenophaga.
REFERENCE   1
  AUTHORS   Gan,H.M., Chew,T.H. and Stolz,A.
  TITLE     Draft genome sequence of Hydrogenophaga intermedia S1
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5288135)
  AUTHORS   Gan,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-FEB-2014) Genomics, MONASH UNIVERSITY, 46150,
            Selangor, MALAYSIA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CCAE000000000.1.
            The Hydrogenophaga intermedia whole genome shotgun (WGS) project
            has the project accession NZ_CCAE000000000.  This version of the
            project (01) has the accession number NZ_CCAE010000000, and
            consists of sequences CCAE010000001-CCAE010000124.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000723405.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:39:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,158
            CDSs (total)                      :: 5,107
            Genes (coding)                    :: 5,040
            CDSs (with protein)               :: 5,040
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 11 of 67
            Pseudo Genes (incomplete)         :: 57 of 67
            Pseudo Genes (internal stop)      :: 4 of 67
            Pseudo Genes (multiple problems)  :: 5 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5288135
                     /organism="Hydrogenophaga intermedia"
                     /mol_type="genomic DNA"
                     /strain="S1"
                     /type_material="type strain of Hydrogenophaga intermedia"
                     /db_xref="taxon:65786"
WGS         CCAE010000001-CCAE010000124
WGS_SCAFLD  NZ_CCAE010000001-NZ_CCAE010000124
//
LOCUS       NZ_CDVETQ010000000   3906394 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Flagellimonas alvinocaridis isolate MarMAG_115782, whole
            genome shotgun sequencing project.
ACCESSION   NZ_CDVETQ000000000
VERSION     NZ_CDVETQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120738435
            Assembly: GCF_977665545.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Flagellimonas alvinocaridis (marine metagenome)
  ORGANISM  Flagellimonas alvinocaridis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flagellimonas.
REFERENCE   1  (bases 1 to 3906394)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVETQ000000000.1.
            The Flagellimonas alvinocaridis whole genome shotgun (WGS) project
            has the project accession NZ_CDVETQ000000000.  This version of the
            project (01) has the accession number NZ_CDVETQ010000000, and
            consists of sequences CDVETQ010000001-CDVETQ010000021.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977665545.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:36:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,594
            CDSs (total)                      :: 3,556
            Genes (coding)                    :: 3,545
            CDSs (with protein)               :: 3,545
            Genes (RNA)                       :: 38
            tRNAs                             :: 34
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 3 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 4 of 11
            Pseudo Genes (multiple problems)  :: 2 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3906394
                     /organism="Flagellimonas alvinocaridis"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_115782"
                     /isolation_source="surface seawater"
                     /db_xref="taxon:2530200"
                     /environmental_sample
                     /geo_loc_name="Costa Rica"
                     /collection_date="2005-07-01"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVETQ010000001-CDVETQ010000021
WGS_SCAFLD  NZ_CDVETQ010000001-NZ_CDVETQ010000021
//
LOCUS       NZ_CDVDGC010000000   2595302 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Glycocaulis albus isolate MarMAG_029454, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CDVDGC000000000
VERSION     NZ_CDVDGC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737631
            Assembly: GCF_977655285.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Glycocaulis albus (marine metagenome)
  ORGANISM  Glycocaulis albus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Maricaulales; Maricaulaceae; Glycocaulis.
REFERENCE   1  (bases 1 to 2595302)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVDGC000000000.1.
            The Glycocaulis albus whole genome shotgun (WGS) project has the
            project accession NZ_CDVDGC000000000.  This version of the project
            (01) has the accession number NZ_CDVDGC010000000, and consists of
            sequences CDVDGC010000001-CDVDGC010000120.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977655285.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:29:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,607
            CDSs (total)                      :: 2,566
            Genes (coding)                    :: 2,540
            CDSs (with protein)               :: 2,540
            Genes (RNA)                       :: 41
            tRNAs                             :: 36
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 4 of 26
            Pseudo Genes (incomplete)         :: 22 of 26
            Pseudo Genes (internal stop)      :: 1 of 26
            Pseudo Genes (multiple problems)  :: 1 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2595302
                     /organism="Glycocaulis albus"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_029454"
                     /isolation_source="Mariana Trench, particle-associated
                     microorganism hadal water (10,500 m)"
                     /db_xref="taxon:1382801"
                     /environmental_sample
                     /geo_loc_name="Pacific Ocean"
                     /collection_date="2016-09-18"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVDGC010000001-CDVDGC010000120
WGS_SCAFLD  NZ_CDVDGC010000001-NZ_CDVDGC010000120
//
LOCUS       NZ_JNOA01000000      1814622 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Helicobacter pullorum strain 229254/12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JNOA00000000
VERSION     NZ_JNOA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02840986
            Assembly: GCF_001299515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Helicobacter pullorum
  ORGANISM  Helicobacter pullorum
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (bases 1 to 1814622)
  AUTHORS   Borges,V., Santos,A., Correia,C.B., Saraiva,M., Menard,A.,
            Vieira,L., Sampaio,D.A., Pinheiro,M., Gomes,J.P. and Oleastro,M.
  TITLE     Helicobacter pullorum isolated from fresh chicken meat: antibiotic
            resistance and genomic traits of an emerging foodborne pathogen
  JOURNAL   Appl Environ Microbiol 81 (23), 8155-8163 (2015)
   PUBMED   26386065
REFERENCE   2  (bases 1 to 1814622)
  AUTHORS   Borges,V., Santos,A., Correia,C.B., Saraiva,M., Menard,A.,
            Vieira,L., Sampaio,D.A., Gomes,J.P. and Oleastro,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-JUN-2014) Department of Infectious Diseases, National
            Institute of Health, Portugal, Av. Padre Cruz, Portugal 19646-016,
            Portugal
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JNOA00000000.1.
            The Helicobacter pullorum whole genome shotgun (WGS) project has
            the project accession NZ_JNOA00000000.  This version of the project
            (01) has the accession number NZ_JNOA01000000, and consists of
            sequences JNOA01000001-JNOA01000138.
            Annotation modified by submitter. Annotation was added by the NCBI
            Prokaryotic Genome Annotation Pipeline (released 2013). Information
            about the Pipeline can be found here:
            http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 2014
            Assembly Method       :: Velvet v. 1.2.10
            Genome Coverage       :: 99.0x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001299515.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:50:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,909
            CDSs (total)                      :: 1,866
            Genes (coding)                    :: 1,818
            CDSs (with protein)               :: 1,818
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 48
            CDSs (without protein)            :: 48
            Pseudo Genes (ambiguous residues) :: 0 of 48
            Pseudo Genes (frameshifted)       :: 3 of 48
            Pseudo Genes (incomplete)         :: 46 of 48
            Pseudo Genes (internal stop)      :: 1 of 48
            Pseudo Genes (multiple problems)  :: 2 of 48
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1814622
                     /organism="Helicobacter pullorum"
                     /mol_type="genomic DNA"
                     /strain="229254/12"
                     /isolation_source="fresh chicken meat"
                     /db_xref="taxon:35818"
                     /geo_loc_name="Portugal"
                     /lat_lon="38.7647 N 9.1648 W"
                     /collection_date="2012"
                     /collected_by="NIH, Portugal"
WGS         JNOA01000001-JNOA01000138
WGS_SCAFLD  NZ_CM003497
WGS_SCAFLD  NZ_JNOA01000001-NZ_JNOA01000054
WGS_SCAFLD  NZ_JNOA01000056-NZ_JNOA01000138
//
LOCUS       NZ_AIEM01000000      6171098 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella oxytoca 11492-1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AIEM00000000
VERSION     NZ_AIEM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02471877
            Assembly: GCF_000252915.2
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella oxytoca 11492-1
  ORGANISM  Klebsiella oxytoca 11492-1
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 6171098)
  AUTHORS   Hazen,T.H., Robinson,G.L., Harris,A.D., Rasko,D.A. and Johnson,J.K.
  TITLE     Genome sequence of Klebsiella oxytoca 11492-1, a nosocomial isolate
            possessing a FOX-5 AmpC beta-lactamase
  JOURNAL   J Bacteriol 194 (11), 3028-3029 (2012)
   PUBMED   22582383
REFERENCE   2  (bases 1 to 6171098)
  AUTHORS   Hazen,T.H. and Rasko,D.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-FEB-2012) Institute for Genome Sciences, University
            of Maryland, 801 West Baltimore Street, Baltimore, MD 21201, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AIEM00000000.1.
            
            On Nov 9, 2015 this sequence version replaced gi:483980001.
            The Klebsiella oxytoca 11492-1 whole genome shotgun (WGS) project
            has the project accession NZ_AIEM00000000.  This version of the
            project (01) has the accession number NZ_AIEM01000000, and consists
            of sequences AIEM01000192-AIEM01000213.
            Source DNA available from Dr. David Rasko, University of Maryland
            School of Medicine, 801 West Baltimore Street, Baltimore, MD,
            21201.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: JAN-2012
            Assembly Method       :: Velvet v. 1.1.04
            Assembly Name         :: Ko11492-1_1.0
            Genome Coverage       :: 75x
            Sequencing Technology :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000252915.2-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:10:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,974
            CDSs (total)                      :: 5,890
            Genes (coding)                    :: 5,757
            CDSs (with protein)               :: 5,757
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 2, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 5 (16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 44 of 133
            Pseudo Genes (incomplete)         :: 101 of 133
            Pseudo Genes (internal stop)      :: 15 of 133
            Pseudo Genes (multiple problems)  :: 23 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6171098
                     /organism="Klebsiella oxytoca 11492-1"
                     /mol_type="genomic DNA"
                     /strain="11492-1"
                     /isolation_source="peri-anal swab culture"
                     /host="Homo sapiens"
                     /db_xref="taxon:1134455"
                     /geo_loc_name="USA: Maryland"
                     /collection_date="2005"
WGS         AIEM01000001-AIEM01000190
WGS         AIEM01000192-AIEM01000213
WGS_SCAFLD  NZ_AIEM01000001-NZ_AIEM01000190
WGS_SCAFLD  NZ_AIEM01000192-NZ_AIEM01000213
//
LOCUS       NZ_JBJKEX010000000   3600504 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Hansschlegelia beijingensis strain Geo2-2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJKEX000000000
VERSION     NZ_JBJKEX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44533502
            Assembly: GCF_045505405.1
KEYWORDS    WGS; RefSeq.
SOURCE      Hansschlegelia beijingensis
  ORGANISM  Hansschlegelia beijingensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Methylopilaceae; Hansschlegelia.
REFERENCE   1  (bases 1 to 3600504)
  AUTHORS   Kaparullina,E.N., Agafonova,N.V., Delegan,Y.A. and Doronina,N.V.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-NOV-2024) Laboratory of Physiology of microrganisms,
            IBPM RAS, Prospekt Nauki 5, Puschino, Moscow region 142290, Russia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKEX000000000.1.
            The Hansschlegelia beijingensis whole genome shotgun (WGS) project
            has the project accession NZ_JBJKEX000000000.  This version of the
            project (01) has the accession number NZ_JBJKEX010000000, and
            consists of sequences JBJKEX010000001-JBJKEX010000751.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Laboratory of Methylotrophy,
            Institute of Biochemistry and Physiology of Microorganisms RAS
            (IBPM RAS), Prospekt Nauki 5, Pushchino, Moscow Region 142290,
            Russia.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: SEP-2024
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 293.0x
            Sequencing Technology  :: SURFSeq 5000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045505405.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:24:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,970
            CDSs (total)                      :: 3,913
            Genes (coding)                    :: 3,554
            CDSs (with protein)               :: 3,554
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 359
            CDSs (without protein)            :: 359
            Pseudo Genes (ambiguous residues) :: 0 of 359
            Pseudo Genes (frameshifted)       :: 19 of 359
            Pseudo Genes (incomplete)         :: 349 of 359
            Pseudo Genes (internal stop)      :: 2 of 359
            Pseudo Genes (multiple problems)  :: 11 of 359
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3600504
                     /organism="Hansschlegelia beijingensis"
                     /mol_type="genomic DNA"
                     /strain="Geo2-2"
                     /isolation_source="grass with roots by the mountain
                     stream"
                     /db_xref="taxon:1133344"
                     /geo_loc_name="Georgia"
                     /collection_date="2022-07"
                     /collected_by="Agafonova N.V."
                     /identified_by="Kaparullina E.N., Doronina N.V."
WGS         JBJKEX010000001-JBJKEX010000751
WGS_SCAFLD  NZ_JBJKEX010000001-NZ_JBJKEX010000751
//
LOCUS       NZ_CDUIPI010000000   2958304 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Ilyobacter polytropus isolate MarMAG_093000, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDUIPI000000000
VERSION     NZ_CDUIPI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120721623
            Assembly: GCF_977515735.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Ilyobacter polytropus (marine sediment metagenome)
  ORGANISM  Ilyobacter polytropus
            Bacteria; Fusobacteriati; Fusobacteriota; Fusobacteriia;
            Fusobacteriales; Fusobacteriaceae; Ilyobacter.
REFERENCE   1  (bases 1 to 2958304)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDUIPI000000000.1.
            The Ilyobacter polytropus whole genome shotgun (WGS) project has
            the project accession NZ_CDUIPI000000000.  This version of the
            project (01) has the accession number NZ_CDUIPI010000000, and
            consists of sequences CDUIPI010000001-CDUIPI010000106.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977515735.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:35:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,874
            CDSs (total)                      :: 2,823
            Genes (coding)                    :: 2,803
            CDSs (with protein)               :: 2,803
            Genes (RNA)                       :: 51
            tRNAs                             :: 48
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 3 of 20
            Pseudo Genes (incomplete)         :: 16 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 3 of 20
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2958304
                     /organism="Ilyobacter polytropus"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_093000"
                     /isolation_source="coastal sea water"
                     /db_xref="taxon:167642"
                     /environmental_sample
                     /geo_loc_name="China"
                     /collection_date="2015-10-10"
                     /metagenome_source="marine sediment metagenome"
                     /metagenomic
WGS         CDUIPI010000001-CDUIPI010000106
WGS_SCAFLD  NZ_CDUIPI010000001-NZ_CDUIPI010000106
//
LOCUS       NZ_PIPF01000000      3105898 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Janibacter hoylei PVAS-1, whole genome shotgun sequencing project.
ACCESSION   NZ_PIPF00000000
VERSION     NZ_PIPF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08111042
            Assembly: GCF_004025845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Janibacter hoylei PVAS-1
  ORGANISM  Janibacter hoylei PVAS-1
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Intrasporangiaceae; Janibacter.
REFERENCE   1  (bases 1 to 3105898)
  AUTHORS   Shivaji,S., Chaturvedi,P., Begum,Z., Pindi,P.K., Manorama,R.,
            Padmanaban,D.A., Shouche,Y.S., Pawar,S., Vaishampayan,P.,
            Dutt,C.B., Datta,G.N., Manchanda,R.K., Rao,U.R., Bhargava,P.M. and
            Narlikar,J.V.
  TITLE     Janibacter hoylei sp. nov., Bacillus isronensis sp. nov. and
            Bacillus aryabhattai sp. nov., isolated from cryotubes used for
            collecting air from the upper atmosphere
  JOURNAL   Int J Syst Evol Microbiol 59 (Pt 12), 2977-2986 (2009)
   PUBMED   19643890
REFERENCE   2  (bases 1 to 3105898)
  AUTHORS   Seuylemezian,A., Cooper,K. and Vaishampayan,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-NOV-2017) Biotechnology and Planetary Protection, Jet
            Propulsion Laboratory, 4800 Oak Grove Dr., M/S 89-102A, Pasadena,
            CA 91109, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PIPF00000000.1.
            The Janibacter hoylei PVAS-1 whole genome shotgun (WGS) project has
            the project accession NZ_PIPF00000000.  This version of the project
            (01) has the accession number NZ_PIPF01000000, and consists of
            sequences PIPF01000001-PIPF01000021.
            Bacteria and source DNA available from Parag Vaishampayan.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 01-NOV-2017
            Assembly Method        :: CLC NGS Cell v. November-2017
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004025845.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:08:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,088
            CDSs (total)                      :: 3,033
            Genes (coding)                    :: 3,000
            CDSs (with protein)               :: 3,000
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 33
            CDSs (without protein)            :: 33
            Pseudo Genes (ambiguous residues) :: 0 of 33
            Pseudo Genes (frameshifted)       :: 6 of 33
            Pseudo Genes (incomplete)         :: 30 of 33
            Pseudo Genes (internal stop)      :: 1 of 33
            Pseudo Genes (multiple problems)  :: 4 of 33
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3105898
                     /organism="Janibacter hoylei PVAS-1"
                     /mol_type="genomic DNA"
                     /strain="PVAS-1"
                     /isolation_source="cryosampler"
                     /type_material="type strain of Janibacter hoylei"
                     /db_xref="taxon:1210046"
                     /geo_loc_name="India"
                     /collection_date="2005-04-20"
WGS         PIPF01000001-PIPF01000021
WGS_SCAFLD  NZ_PIPF01000001-NZ_PIPF01000021
//
LOCUS       NZ_APNU01000000      5161340 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli HM27, whole genome shotgun sequencing project.
ACCESSION   NZ_APNU00000000
VERSION     NZ_APNU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02436019
            Assembly: GCF_000387825.2
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli HM27
  ORGANISM  Escherichia coli HM27
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5161340)
  AUTHORS   Subashchandrabose,S., Hazen,T.H., Rasko,D.A. and Mobley,H.L.
  TITLE     Draft genome sequences of five recent human uropathogenic
            Escherichia coli isolates
  JOURNAL   Pathog Dis 69 (1), 66-70 (2013)
   PUBMED   23821517
REFERENCE   2  (bases 1 to 5161340)
  AUTHORS   Subashchandrabose,S., Hazen,T.H., Rasko,D.A. and Mobley,H.L.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-MAR-2013) Institute for Genome Sciences, University
            of Maryland, Baltimore, 801 West Baltimore Street, Baltimore, MD
            21212, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            APNU00000000.1.
            
            On Nov 11, 2015 this sequence version replaced gi:489583389.
            The Escherichia coli HM27 whole genome shotgun (WGS) project has
            the project accession NZ_APNU00000000.  This version of the project
            (01) has the accession number NZ_APNU01000000, and consists of
            sequences APNU01000266-APNU01000285.
            Source DNA available from Dr. Harry Mobley, University of Michigan
            Department of Microbiology and Immunology, 5641 Medical Science
            Bldg. II, 1150 West Medical Center Dr., Ann Arbor, MI, 48109-5620,
            USA.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.1.04
            Genome Coverage       :: 250x
            Sequencing Technology :: Illumina HiSeq 2500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000387825.2-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:14:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,118
            CDSs (total)                      :: 5,026
            Genes (coding)                    :: 4,742
            CDSs (with protein)               :: 4,742
            Genes (RNA)                       :: 92
            rRNAs                             :: 6, 4, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 3, 2 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 284
            CDSs (without protein)            :: 284
            Pseudo Genes (ambiguous residues) :: 0 of 284
            Pseudo Genes (frameshifted)       :: 104 of 284
            Pseudo Genes (incomplete)         :: 216 of 284
            Pseudo Genes (internal stop)      :: 47 of 284
            Pseudo Genes (multiple problems)  :: 74 of 284
            Pseudo Genes (short protein)      :: 1 of 284
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5161340
                     /organism="Escherichia coli HM27"
                     /mol_type="genomic DNA"
                     /strain="HM27"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:1308981"
                     /geo_loc_name="USA: MI"
                     /collection_date="2012"
WGS         APNU01000001-APNU01000264
WGS         APNU01000266-APNU01000285
WGS_SCAFLD  NZ_APNU01000001-NZ_APNU01000264
WGS_SCAFLD  NZ_APNU01000266-NZ_APNU01000285
//
LOCUS       NZ_JBBEWJ010000000   3657957 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Heyndrickxia faecalis strain TCI711, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBBEWJ000000000
VERSION     NZ_JBBEWJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39973066
            Assembly: GCF_037416475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Heyndrickxia faecalis
  ORGANISM  Heyndrickxia faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Heyndrickxia.
REFERENCE   1  (bases 1 to 3657957)
  AUTHORS   Huang,C.H. and Ting,Y.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-FEB-2024) H&M, TCI Co., Ltd., 8F, No. 187, Kang Chien
            Rd., Taipei 114722, Taiwan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBEWJ000000000.1.
            The Heyndrickxia faecalis whole genome shotgun (WGS) project has
            the project accession NZ_JBBEWJ000000000.  This version of the
            project (01) has the accession number NZ_JBBEWJ010000000, and
            consists of sequences JBBEWJ010000001-JBBEWJ010000003.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from TCI Co.,LTD.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.1; Canu v. 2.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 282.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037416475.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:54:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,485
            CDSs (total)                      :: 3,366
            Genes (coding)                    :: 3,284
            CDSs (with protein)               :: 3,284
            Genes (RNA)                       :: 119
            rRNAs                             :: 10, 10, 10 (5S, 16S, 23S)
            complete rRNAs                    :: 10, 10, 10 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 38 of 82
            Pseudo Genes (incomplete)         :: 43 of 82
            Pseudo Genes (internal stop)      :: 12 of 82
            Pseudo Genes (multiple problems)  :: 11 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3657957
                     /organism="Heyndrickxia faecalis"
                     /mol_type="genomic DNA"
                     /strain="TCI711"
                     /isolation_source="apple"
                     /db_xref="taxon:2824910"
                     /geo_loc_name="Taiwan"
                     /collection_date="2016-08-12"
                     /collected_by="TCI Co., LTD"
WGS         JBBEWJ010000001-JBBEWJ010000003
WGS_SCAFLD  NZ_JBBEWJ010000001-NZ_JBBEWJ010000003
//
LOCUS       NZ_JBJLNM010000000   5853321 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 1044471, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLNM000000000
VERSION     NZ_JBJLNM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061637
            Assembly: GCF_045570495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5853321)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5853321)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLNM000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLNM000000000.  This version of the
            project (01) has the accession number NZ_JBJLNM010000000, and
            consists of sequences JBJLNM010000001-JBJLNM010000109.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.42
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045570495.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:28:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,844
            CDSs (total)                      :: 5,750
            Genes (coding)                    :: 5,581
            CDSs (with protein)               :: 5,581
            Genes (RNA)                       :: 94
            rRNAs                             :: 1, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 3 (16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 169
            CDSs (without protein)            :: 169
            Pseudo Genes (ambiguous residues) :: 0 of 169
            Pseudo Genes (frameshifted)       :: 76 of 169
            Pseudo Genes (incomplete)         :: 96 of 169
            Pseudo Genes (internal stop)      :: 30 of 169
            Pseudo Genes (multiple problems)  :: 26 of 169
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5853321
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="1044471"
                     /isolation_source="RECTAL SWAB"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-10-24"
                     /collected_by="HUMS"
WGS         JBJLNM010000001-JBJLNM010000109
WGS_SCAFLD  NZ_JBJLNM010000001-NZ_JBJLNM010000109
//
LOCUS       NZ_JHLJ01000000      5281639 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli O104:H4 str. 2011EL-1675A, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JHLJ00000000
VERSION     NZ_JHLJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02353037
            Assembly: GCF_000616385.2
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli O104:H4 str. 2011EL-1675A
  ORGANISM  Escherichia coli O104:H4 str. 2011EL-1675A
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5281639)
  AUTHORS   Trees,E., Strockbine,N., Changayil,S., Ranganathan,S., Zhao,K.,
            Weil,R., MacCannell,D., Sabol,A., Schmidtke,A., Martin,H.,
            Stripling,D., Ribot,E.M. and Gerner-Smidt,P.
  TITLE     Genome Sequences of 228 Shiga Toxin-Producing Escherichia coli
            Isolates and 12 Isolates Representing Other Diarrheagenic E. coli
            Pathotypes
  JOURNAL   Genome Announc 2 (4), e00718-14 (2014)
   PUBMED   25103754
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5281639)
  AUTHORS   Lindsey,R., Trees,E., Sammons,S., Frace,M., Loparev,V., Sabol,A.,
            Strockbine,N. and Gerner-Smidt,P.
  TITLE     PulseNet STEC Genome Sequencing
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 5281639)
  AUTHORS   Lindsey,R., Trees,E., Sammons,S., Frace,M., Loparev,V., Sabol,A.,
            Strockbine,N. and Gerner-Smidt,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-FEB-2014) Enteric Diseases Laboratory Branch, DFWED,
            NCEZID, Centers For Disease Control, 1600 Clifton Road,NE, MS-CO3,
            Atlanta, GA 30329, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JHLJ00000000.1.
            
            On Nov 11, 2015 this sequence version replaced gi:693016775.
            The Escherichia coli O104:H4 str. 2011EL-1675A whole genome shotgun
            (WGS) project has the project accession NZ_JHLJ00000000.  This
            version of the project (01) has the accession number
            NZ_JHLJ01000000, and consists of sequences
            JHLJ01000107-JHLJ01000186.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: CLC Genomics Workbench v. 6.5.Jan-2013
            Assembly Name         :: Ec2011EL-1675A
            Genome Coverage       :: 100.0x
            Sequencing Technology :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000616385.2-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:18:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,351
            CDSs (total)                      :: 5,262
            Genes (coding)                    :: 4,956
            CDSs (with protein)               :: 4,956
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 306
            CDSs (without protein)            :: 306
            Pseudo Genes (ambiguous residues) :: 0 of 306
            Pseudo Genes (frameshifted)       :: 108 of 306
            Pseudo Genes (incomplete)         :: 207 of 306
            Pseudo Genes (internal stop)      :: 53 of 306
            Pseudo Genes (multiple problems)  :: 53 of 306
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5281639
                     /organism="Escherichia coli O104:H4 str. 2011EL-1675A"
                     /mol_type="genomic DNA"
                     /strain="2011EL-1675A"
                     /serovar="O104:H4"
                     /db_xref="taxon:1446507"
                     /geo_loc_name="USA"
                     /collected_by="CDC"
WGS         JHLJ01000001-JHLJ01000105
WGS         JHLJ01000107-JHLJ01000186
WGS_SCAFLD  NZ_JHLJ01000001-NZ_JHLJ01000105
WGS_SCAFLD  NZ_JHLJ01000107-NZ_JHLJ01000186
//
LOCUS       NZ_JBJLND010000000   5560351 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 236593, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLND000000000
VERSION     NZ_JBJLND000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061647
            Assembly: GCF_045570195.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5560351)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5560351)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLND000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLND000000000.  This version of the
            project (01) has the accession number NZ_JBJLND010000000, and
            consists of sequences JBJLND010000001-JBJLND010000126.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.52
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045570195.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:18:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,509
            CDSs (total)                      :: 5,418
            Genes (coding)                    :: 5,306
            CDSs (with protein)               :: 5,306
            Genes (RNA)                       :: 91
            rRNAs                             :: 1, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 4, 4 (16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 112
            CDSs (without protein)            :: 112
            Pseudo Genes (ambiguous residues) :: 0 of 112
            Pseudo Genes (frameshifted)       :: 52 of 112
            Pseudo Genes (incomplete)         :: 60 of 112
            Pseudo Genes (internal stop)      :: 19 of 112
            Pseudo Genes (multiple problems)  :: 15 of 112
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5560351
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="236593"
                     /isolation_source="RECTAL SWAB"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2021-06-29"
                     /collected_by="HUMS"
WGS         JBJLND010000001-JBJLND010000126
WGS_SCAFLD  NZ_JBJLND010000001-NZ_JBJLND010000126
//
LOCUS       NZ_CDVDMY010000000   4136909 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Flagellimonas olearia isolate MarMAG_115748, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVDMY000000000
VERSION     NZ_CDVDMY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120738464
            Assembly: GCF_977657055.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Flagellimonas olearia (marine metagenome)
  ORGANISM  Flagellimonas olearia
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flagellimonas.
REFERENCE   1  (bases 1 to 4136909)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVDMY000000000.1.
            The Flagellimonas olearia whole genome shotgun (WGS) project has
            the project accession NZ_CDVDMY000000000.  This version of the
            project (01) has the accession number NZ_CDVDMY010000000, and
            consists of sequences CDVDMY010000001-CDVDMY010000021.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977657055.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:38:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,801
            CDSs (total)                      :: 3,761
            Genes (coding)                    :: 3,752
            CDSs (with protein)               :: 3,752
            Genes (RNA)                       :: 40
            rRNAs                             :: 2 (5S)
            complete rRNAs                    :: 2 (5S)
            tRNAs                             :: 34
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 7 of 9
            Pseudo Genes (internal stop)      :: 2 of 9
            Pseudo Genes (multiple problems)  :: 1 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4136909
                     /organism="Flagellimonas olearia"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_115748"
                     /isolation_source="surface seawater"
                     /db_xref="taxon:552546"
                     /environmental_sample
                     /geo_loc_name="Costa Rica"
                     /collection_date="2005-07-01"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVDMY010000001-CDVDMY010000021
WGS_SCAFLD  NZ_CDVDMY010000001-NZ_CDVDMY010000021
//
LOCUS       NZ_CDVFPO010000000   3679068 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Flagellimonas alvinocaridis isolate MarMAG_115783, whole
            genome shotgun sequencing project.
ACCESSION   NZ_CDVFPO000000000
VERSION     NZ_CDVFPO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120738448
            Assembly: GCF_977671245.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Flagellimonas alvinocaridis (marine metagenome)
  ORGANISM  Flagellimonas alvinocaridis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Flagellimonas.
REFERENCE   1  (bases 1 to 3679068)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVFPO000000000.1.
            The Flagellimonas alvinocaridis whole genome shotgun (WGS) project
            has the project accession NZ_CDVFPO000000000.  This version of the
            project (01) has the accession number NZ_CDVFPO010000000, and
            consists of sequences CDVFPO010000001-CDVFPO010000037.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977671245.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:38:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,355
            CDSs (total)                      :: 3,327
            Genes (coding)                    :: 3,310
            CDSs (with protein)               :: 3,310
            Genes (RNA)                       :: 28
            tRNAs                             :: 24
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 17
            CDSs (without protein)            :: 17
            Pseudo Genes (ambiguous residues) :: 0 of 17
            Pseudo Genes (frameshifted)       :: 3 of 17
            Pseudo Genes (incomplete)         :: 12 of 17
            Pseudo Genes (internal stop)      :: 4 of 17
            Pseudo Genes (multiple problems)  :: 2 of 17
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3679068
                     /organism="Flagellimonas alvinocaridis"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_115783"
                     /isolation_source="surface seawater"
                     /db_xref="taxon:2530200"
                     /environmental_sample
                     /geo_loc_name="Costa Rica"
                     /collection_date="2005-07-01"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVFPO010000001-CDVFPO010000037
WGS_SCAFLD  NZ_CDVFPO010000001-NZ_CDVFPO010000037
//
LOCUS       NZ_JBJLNJ010000000   5798473 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 1080525, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLNJ000000000
VERSION     NZ_JBJLNJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061641
            Assembly: GCF_045570335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5798473)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5798473)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLNJ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLNJ000000000.  This version of the
            project (01) has the accession number NZ_JBJLNJ010000000, and
            consists of sequences JBJLNJ010000001-JBJLNJ010000189.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.46
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045570335.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:20:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,848
            CDSs (total)                      :: 5,773
            Genes (coding)                    :: 5,622
            CDSs (with protein)               :: 5,622
            Genes (RNA)                       :: 75
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 63
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 151
            CDSs (without protein)            :: 151
            Pseudo Genes (ambiguous residues) :: 0 of 151
            Pseudo Genes (frameshifted)       :: 54 of 151
            Pseudo Genes (incomplete)         :: 96 of 151
            Pseudo Genes (internal stop)      :: 26 of 151
            Pseudo Genes (multiple problems)  :: 19 of 151
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5798473
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="1080525"
                     /isolation_source="trachea"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-12-07"
                     /collected_by="HUMS"
WGS         JBJLNJ010000001-JBJLNJ010000189
WGS_SCAFLD  NZ_JBJLNJ010000001-NZ_JBJLNJ010000189
//
LOCUS       NZ_JAKZMN010000000   1997770 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Fervidobacterium pennivorans subsp. shakshaketiis strain GSH, whole
            genome shotgun sequencing project.
ACCESSION   NZ_JAKZMN000000000
VERSION     NZ_JAKZMN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN26535700
            Assembly: GCF_056172635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Fervidobacterium pennivorans subsp. shakshaketiis
  ORGANISM  Fervidobacterium pennivorans subsp. shakshaketiis
            Bacteria; Thermotogati; Thermotogota; Thermotogae; Thermotogales;
            Fervidobacteriaceae; Fervidobacterium.
REFERENCE   1  (bases 1 to 1997770)
  AUTHORS   Javier-Lopez,R., Geliashvili,N. and Birkeland,N.-K.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-MAR-2022) Extremophiles and Biotechnology, UiB,
            Thormohlens Gate, Bergen, Hordaland 5006, Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAKZMN000000000.1.
            The Fervidobacterium pennivorans subsp. shakshaketiis whole genome
            shotgun (WGS) project has the project accession NZ_JAKZMN000000000.
            This version of the project (01) has the accession number
            NZ_JAKZMN010000000, and consists of sequences
            JAKZMN010000001-JAKZMN010000034.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 20
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 150.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172635.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:53:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,940
            CDSs (total)                      :: 1,888
            Genes (coding)                    :: 1,867
            CDSs (with protein)               :: 1,867
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 16 of 21
            Pseudo Genes (internal stop)      :: 2 of 21
            Pseudo Genes (multiple problems)  :: 2 of 21
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1997770
                     /organism="Fervidobacterium pennivorans subsp.
                     shakshaketiis"
                     /mol_type="genomic DNA"
                     /strain="GSH"
                     /isolation_source="hot spring"
                     /sub_species="shakshaketiis"
                     /type_material="type strain of Fervidobacterium
                     pennivorans subsp. shakshaketiis"
                     /db_xref="taxon:3389975"
                     /geo_loc_name="Georgia"
                     /collection_date="2019"
WGS         JAKZMN010000001-JAKZMN010000034
WGS_SCAFLD  NZ_JAKZMN010000001-NZ_JAKZMN010000034
//
LOCUS       NZ_JBIGML010000000   5547007 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E325, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGML000000000
VERSION     NZ_JBIGML000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130652
            Assembly: GCF_045572055.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5547007)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGML000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGML000000000.  This version of the
            project (01) has the accession number NZ_JBIGML010000000, and
            consists of sequences JBIGML010000001-JBIGML010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 105x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045572055.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:19:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,442
            CDSs (total)                      :: 5,322
            Genes (coding)                    :: 5,177
            CDSs (with protein)               :: 5,177
            Genes (RNA)                       :: 120
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 86 of 145
            Pseudo Genes (incomplete)         :: 62 of 145
            Pseudo Genes (internal stop)      :: 22 of 145
            Pseudo Genes (multiple problems)  :: 23 of 145
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5547007
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E325"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGML010000001-JBIGML010000007
WGS_SCAFLD  NZ_JBIGML010000001-NZ_JBIGML010000007
//
LOCUS       NZ_JBRWNO010000000   5662928 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 21P1326, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWNO000000000
VERSION     NZ_JBRWNO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385105
            Assembly: GCF_056161925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5662928)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5662928)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWNO000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWNO000000000.  This version of the
            project (01) has the accession number NZ_JBRWNO010000000, and
            consists of sequences JBRWNO010000001-JBRWNO010000099.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161925.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:56:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,680
            CDSs (total)                      :: 5,601
            Genes (coding)                    :: 5,474
            CDSs (with protein)               :: 5,474
            Genes (RNA)                       :: 79
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 127
            CDSs (without protein)            :: 127
            Pseudo Genes (ambiguous residues) :: 0 of 127
            Pseudo Genes (frameshifted)       :: 47 of 127
            Pseudo Genes (incomplete)         :: 81 of 127
            Pseudo Genes (internal stop)      :: 21 of 127
            Pseudo Genes (multiple problems)  :: 19 of 127
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5662928
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="21P1326"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982759 N 116.360012 E"
                     /collection_date="2021-12-11"
                     /collected_by="Ping Yang"
                     /genotype="ST11"
WGS         JBRWNO010000001-JBRWNO010000099
WGS_SCAFLD  NZ_JBRWNO010000001-NZ_JBRWNO010000099
//
LOCUS       NZ_PJPB01000000      5584431 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain AH-29, whole genome shotgun sequencing
            project.
ACCESSION   NZ_PJPB00000000
VERSION     NZ_PJPB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08176467
            Assembly: GCF_002844965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5584431)
  AUTHORS   Dong,N., Zhang,R., Liu,L., Li,R., Lin,D., Chan,E.W.-C. and Chen,S.
  TITLE     Genome analysis of Clinical Multilocus Sequence Type 11 Klebsiella
            pneumoniae from China
  JOURNAL   Microb Genom (2017) In press
REFERENCE   2  (bases 1 to 5584431)
  AUTHORS   Dong,N., Zhang,R., Liu,L., Li,R., Lin,D., Chan,E.W.-C. and Chen,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-DEC-2017) Department of Applied Biology and Chemical
            Technology, The Hong Kong Polytechnic University, Hung Hom,
            Kowloon, Hong Kong
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PJPB00000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_PJPB00000000.  This version of the project
            (01) has the accession number NZ_PJPB01000000, and consists of
            sequences PJPB01000001-PJPB01000109.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 01-MAR-2015
            Assembly Method        :: SPAdes v. 3.9.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 55x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002844965.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:11:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,622
            CDSs (total)                      :: 5,528
            Genes (coding)                    :: 5,409
            CDSs (with protein)               :: 5,409
            Genes (RNA)                       :: 94
            rRNAs                             :: 7, 3, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 7 (5S)
            partial rRNAs                     :: 3, 6 (16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 119
            CDSs (without protein)            :: 119
            Pseudo Genes (ambiguous residues) :: 0 of 119
            Pseudo Genes (frameshifted)       :: 45 of 119
            Pseudo Genes (incomplete)         :: 74 of 119
            Pseudo Genes (internal stop)      :: 16 of 119
            Pseudo Genes (multiple problems)  :: 13 of 119
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5584431
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="AH-29"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /collection_date="2015"
WGS         PJPB01000001-PJPB01000109
WGS_SCAFLD  NZ_PJPB01000001-NZ_PJPB01000109
//
LOCUS       NZ_JBIGPL010000000   5655216 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E199, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGPL000000000
VERSION     NZ_JBIGPL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130544
            Assembly: GCF_045573605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5655216)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGPL000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGPL000000000.  This version of the
            project (01) has the accession number NZ_JBIGPL010000000, and
            consists of sequences JBIGPL010000001-JBIGPL010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 389x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045573605.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:39:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,618
            CDSs (total)                      :: 5,488
            Genes (coding)                    :: 5,316
            CDSs (with protein)               :: 5,316
            Genes (RNA)                       :: 130
            rRNAs                             :: 9, 9, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 9 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 15
            Pseudo Genes (total)              :: 172
            CDSs (without protein)            :: 172
            Pseudo Genes (ambiguous residues) :: 0 of 172
            Pseudo Genes (frameshifted)       :: 96 of 172
            Pseudo Genes (incomplete)         :: 82 of 172
            Pseudo Genes (internal stop)      :: 24 of 172
            Pseudo Genes (multiple problems)  :: 27 of 172
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5655216
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E199"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGPL010000001-JBIGPL010000008
WGS_SCAFLD  NZ_JBIGPL010000001-NZ_JBIGPL010000008
//
LOCUS       NZ_JBFUOY010000000   5640219 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 39R-01, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBFUOY000000000
VERSION     NZ_JBFUOY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN42912228
            Assembly: GCF_041061555.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5640219)
  AUTHORS   Gaibani,P. and Secci,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-JUL-2024) Diagnostics and Public Health, Section of
            Microbiology, University of Verona, Italy, Strada le grazie, 8,
            Verona 37134, Italy
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBFUOY000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBFUOY000000000.  This version of the
            project (01) has the accession number NZ_JBFUOY010000000, and
            consists of sequences JBFUOY010000001-JBFUOY010000101.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v. 3.16.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 99x
            Sequencing Technology  :: Illumina iSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_041061555.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:02:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,723
            CDSs (total)                      :: 5,623
            Genes (coding)                    :: 5,481
            CDSs (with protein)               :: 5,481
            Genes (RNA)                       :: 100
            rRNAs                             :: 7, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 16S)
            partial rRNAs                     :: 3, 3 (5S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 142
            CDSs (without protein)            :: 142
            Pseudo Genes (ambiguous residues) :: 0 of 142
            Pseudo Genes (frameshifted)       :: 46 of 142
            Pseudo Genes (incomplete)         :: 101 of 142
            Pseudo Genes (internal stop)      :: 13 of 142
            Pseudo Genes (multiple problems)  :: 15 of 142
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5640219
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="39R-01"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Italy: Torino"
                     /lat_lon="45.04595651 N 7.67493876 E"
                     /collection_date="2022"
                     /collected_by="Azienda ospedaliero universitaria Torino"
WGS         JBFUOY010000001-JBFUOY010000101
WGS_SCAFLD  NZ_JBFUOY010000001-NZ_JBFUOY010000101
//
LOCUS       NZ_JBRWNN010000000   5701579 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain PE264, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBRWNN000000000
VERSION     NZ_JBRWNN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385106
            Assembly: GCF_056161885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5701579)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5701579)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWNN000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWNN000000000.  This version of the
            project (01) has the accession number NZ_JBRWNN010000000, and
            consists of sequences JBRWNN010000001-JBRWNN010000113.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161885.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:55:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,748
            CDSs (total)                      :: 5,668
            Genes (coding)                    :: 5,535
            CDSs (with protein)               :: 5,535
            Genes (RNA)                       :: 80
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 40 of 133
            Pseudo Genes (incomplete)         :: 95 of 133
            Pseudo Genes (internal stop)      :: 18 of 133
            Pseudo Genes (multiple problems)  :: 18 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5701579
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="PE264"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982760 N 116.360012 E"
                     /collection_date="2022-07-08"
                     /collected_by="Ping Yang"
                     /genotype="ST11"
WGS         JBRWNN010000001-JBRWNN010000113
WGS_SCAFLD  NZ_JBRWNN010000001-NZ_JBRWNN010000113
//
LOCUS       NZ_JBIGRJ010000000   5848384 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E124, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGRJ000000000
VERSION     NZ_JBIGRJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130476
            Assembly: GCF_045574605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5848384)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGRJ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGRJ000000000.  This version of the
            project (01) has the accession number NZ_JBIGRJ010000000, and
            consists of sequences JBIGRJ010000001-JBIGRJ010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 123x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045574605.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:45:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,865
            CDSs (total)                      :: 5,741
            Genes (coding)                    :: 5,530
            CDSs (with protein)               :: 5,530
            Genes (RNA)                       :: 124
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 211
            CDSs (without protein)            :: 211
            Pseudo Genes (ambiguous residues) :: 0 of 211
            Pseudo Genes (frameshifted)       :: 119 of 211
            Pseudo Genes (incomplete)         :: 107 of 211
            Pseudo Genes (internal stop)      :: 21 of 211
            Pseudo Genes (multiple problems)  :: 29 of 211
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5848384
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E124"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGRJ010000001-JBIGRJ010000008
WGS_SCAFLD  NZ_JBIGRJ010000001-NZ_JBIGRJ010000008
//
LOCUS       NZ_JBRWNR010000000   5631561 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 21P1208, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWNR000000000
VERSION     NZ_JBRWNR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385102
            Assembly: GCF_056161985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5631561)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5631561)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWNR000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWNR000000000.  This version of the
            project (01) has the accession number NZ_JBRWNR010000000, and
            consists of sequences JBRWNR010000001-JBRWNR010000103.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161985.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:59:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,644
            CDSs (total)                      :: 5,561
            Genes (coding)                    :: 5,433
            CDSs (with protein)               :: 5,433
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 49 of 128
            Pseudo Genes (incomplete)         :: 85 of 128
            Pseudo Genes (internal stop)      :: 16 of 128
            Pseudo Genes (multiple problems)  :: 18 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5631561
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="21P1208"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982756 N 116.360012 E"
                     /collection_date="2021-10-29"
                     /collected_by="Ping Yang"
                     /genotype="ST11"
WGS         JBRWNR010000001-JBRWNR010000103
WGS_SCAFLD  NZ_JBRWNR010000001-NZ_JBRWNR010000103
//
LOCUS       NZ_JBRWNQ010000000   5682361 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 21P1244, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWNQ000000000
VERSION     NZ_JBRWNQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385103
            Assembly: GCF_056161945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5682361)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5682361)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWNQ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWNQ000000000.  This version of the
            project (01) has the accession number NZ_JBRWNQ010000000, and
            consists of sequences JBRWNQ010000001-JBRWNQ010000105.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161945.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:00:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,759
            CDSs (total)                      :: 5,681
            Genes (coding)                    :: 5,543
            CDSs (with protein)               :: 5,543
            Genes (RNA)                       :: 78
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 138
            CDSs (without protein)            :: 138
            Pseudo Genes (ambiguous residues) :: 0 of 138
            Pseudo Genes (frameshifted)       :: 50 of 138
            Pseudo Genes (incomplete)         :: 91 of 138
            Pseudo Genes (internal stop)      :: 20 of 138
            Pseudo Genes (multiple problems)  :: 18 of 138
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5682361
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="21P1244"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982757 N 116.360012 E"
                     /collection_date="2021-11-15"
                     /collected_by="Ping Yang"
                     /genotype="ST11"
WGS         JBRWNQ010000001-JBRWNQ010000105
WGS_SCAFLD  NZ_JBRWNQ010000001-NZ_JBRWNQ010000105
//
LOCUS       NZ_JBIGSF010000000   5840630 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E83, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGSF000000000
VERSION     NZ_JBIGSF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130440
            Assembly: GCF_045575005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5840630)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGSF000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGSF000000000.  This version of the
            project (01) has the accession number NZ_JBIGSF010000000, and
            consists of sequences JBIGSF010000001-JBIGSF010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 383x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575005.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:46:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,843
            CDSs (total)                      :: 5,722
            Genes (coding)                    :: 5,562
            CDSs (with protein)               :: 5,562
            Genes (RNA)                       :: 121
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 160
            CDSs (without protein)            :: 160
            Pseudo Genes (ambiguous residues) :: 0 of 160
            Pseudo Genes (frameshifted)       :: 72 of 160
            Pseudo Genes (incomplete)         :: 93 of 160
            Pseudo Genes (internal stop)      :: 20 of 160
            Pseudo Genes (multiple problems)  :: 21 of 160
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5840630
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E83"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGSF010000001-JBIGSF010000004
WGS_SCAFLD  NZ_JBIGSF010000001-NZ_JBIGSF010000004
//
LOCUS       NZ_JBRWNT010000000   5756502 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 21P909, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWNT000000000
VERSION     NZ_JBRWNT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385100
            Assembly: GCF_056162005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5756502)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5756502)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWNT000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWNT000000000.  This version of the
            project (01) has the accession number NZ_JBRWNT010000000, and
            consists of sequences JBRWNT010000001-JBRWNT010000107.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162005.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:02:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,819
            CDSs (total)                      :: 5,742
            Genes (coding)                    :: 5,593
            CDSs (with protein)               :: 5,593
            Genes (RNA)                       :: 77
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 149
            CDSs (without protein)            :: 149
            Pseudo Genes (ambiguous residues) :: 0 of 149
            Pseudo Genes (frameshifted)       :: 59 of 149
            Pseudo Genes (incomplete)         :: 97 of 149
            Pseudo Genes (internal stop)      :: 24 of 149
            Pseudo Genes (multiple problems)  :: 28 of 149
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5756502
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="21P909"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982754 N 116.360012 E"
                     /collection_date="2021-07-23"
                     /collected_by="Ping Yang"
                     /genotype="ST11"
WGS         JBRWNT010000001-JBRWNT010000107
WGS_SCAFLD  NZ_JBRWNT010000001-NZ_JBRWNT010000107
//
LOCUS       NZ_JBIGST010000000   5873439 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E63, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGST000000000
VERSION     NZ_JBIGST000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130421
            Assembly: GCF_045575355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5873439)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGST000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGST000000000.  This version of the
            project (01) has the accession number NZ_JBIGST010000000, and
            consists of sequences JBIGST010000001-JBIGST010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 596x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575355.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:47:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,777
            CDSs (total)                      :: 5,655
            Genes (coding)                    :: 5,463
            CDSs (with protein)               :: 5,463
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 192
            CDSs (without protein)            :: 192
            Pseudo Genes (ambiguous residues) :: 0 of 192
            Pseudo Genes (frameshifted)       :: 100 of 192
            Pseudo Genes (incomplete)         :: 90 of 192
            Pseudo Genes (internal stop)      :: 22 of 192
            Pseudo Genes (multiple problems)  :: 17 of 192
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5873439
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E63"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGST010000001-JBIGST010000005
WGS_SCAFLD  NZ_JBIGST010000001-NZ_JBIGST010000005
//
LOCUS       NZ_JBIGTK010000000   6008960 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E32, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGTK000000000
VERSION     NZ_JBIGTK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130398
            Assembly: GCF_045575695.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 6008960)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGTK000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGTK000000000.  This version of the
            project (01) has the accession number NZ_JBIGTK010000000, and
            consists of sequences JBIGTK010000001-JBIGTK010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 126x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575695.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:00:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,027
            CDSs (total)                      :: 5,905
            Genes (coding)                    :: 5,716
            CDSs (with protein)               :: 5,716
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 189
            CDSs (without protein)            :: 189
            Pseudo Genes (ambiguous residues) :: 0 of 189
            Pseudo Genes (frameshifted)       :: 98 of 189
            Pseudo Genes (incomplete)         :: 102 of 189
            Pseudo Genes (internal stop)      :: 21 of 189
            Pseudo Genes (multiple problems)  :: 28 of 189
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6008960
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E32"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGTK010000001-JBIGTK010000008
WGS_SCAFLD  NZ_JBIGTK010000001-NZ_JBIGTK010000008
//
LOCUS       NZ_JBJJSU010000000   5812945 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain Sy161667, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJJSU000000000
VERSION     NZ_JBJJSU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44729014
            Assembly: GCF_045504205.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5812945)
  AUTHORS   Wang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) Laboratory medicine department, The Third
            People's Hospital of Shenzhen, 29 Bulan Road, Shenzhen, Guangdong
            518000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJJSU000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJJSU000000000.  This version of the
            project (01) has the accession number NZ_JBJJSU010000000, and
            consists of sequences JBJJSU010000001-JBJJSU010000301.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045504205.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:09:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,026
            CDSs (total)                      :: 5,910
            Genes (coding)                    :: 5,654
            CDSs (with protein)               :: 5,654
            Genes (RNA)                       :: 116
            rRNAs                             :: 9, 8, 10 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 7, 8, 10 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 256
            CDSs (without protein)            :: 256
            Pseudo Genes (ambiguous residues) :: 0 of 256
            Pseudo Genes (frameshifted)       :: 67 of 256
            Pseudo Genes (incomplete)         :: 195 of 256
            Pseudo Genes (internal stop)      :: 24 of 256
            Pseudo Genes (multiple problems)  :: 27 of 256
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5812945
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="Sy161667"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China: Shenzhen"
                     /collection_date="2023-10-03"
WGS         JBJJSU010000001-JBJJSU010000301
WGS_SCAFLD  NZ_JBJJSU010000001-NZ_JBJJSU010000301
//
LOCUS       NZ_JBIXBE010000000   5619049 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1166, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXBE000000000
VERSION     NZ_JBIXBE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247323
            Assembly: GCF_045619465.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5619049)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXBE000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXBE000000000.  This version of the
            project (01) has the accession number NZ_JBIXBE010000000, and
            consists of sequences JBIXBE010000001-JBIXBE010000011.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 294x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045619465.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:44:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,534
            CDSs (total)                      :: 5,409
            Genes (coding)                    :: 5,174
            CDSs (with protein)               :: 5,174
            Genes (RNA)                       :: 125
            rRNAs                             :: 9, 9, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 8 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 85
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 235
            CDSs (without protein)            :: 235
            Pseudo Genes (ambiguous residues) :: 0 of 235
            Pseudo Genes (frameshifted)       :: 149 of 235
            Pseudo Genes (incomplete)         :: 90 of 235
            Pseudo Genes (internal stop)      :: 25 of 235
            Pseudo Genes (multiple problems)  :: 26 of 235
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5619049
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1166"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXBE010000001-JBIXBE010000011
WGS_SCAFLD  NZ_JBIXBE010000001-NZ_JBIXBE010000011
//
LOCUS       NZ_JBJJSV010000000   5759250 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain Sy161707, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJJSV000000000
VERSION     NZ_JBJJSV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44729015
            Assembly: GCF_045504315.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5759250)
  AUTHORS   Wang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) Laboratory medicine department, The Third
            People's Hospital of Shenzhen, 29 Bulan Road, Shenzhen, Guangdong
            518000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJJSV000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJJSV000000000.  This version of the
            project (01) has the accession number NZ_JBJJSV010000000, and
            consists of sequences JBJJSV010000001-JBJJSV010000177.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045504315.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:04:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,883
            CDSs (total)                      :: 5,762
            Genes (coding)                    :: 5,561
            CDSs (with protein)               :: 5,561
            Genes (RNA)                       :: 121
            rRNAs                             :: 11, 9, 11 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 9, 9, 11 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 201
            CDSs (without protein)            :: 201
            Pseudo Genes (ambiguous residues) :: 0 of 201
            Pseudo Genes (frameshifted)       :: 64 of 201
            Pseudo Genes (incomplete)         :: 141 of 201
            Pseudo Genes (internal stop)      :: 24 of 201
            Pseudo Genes (multiple problems)  :: 25 of 201
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5759250
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="Sy161707"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China: Shenzhen"
                     /collection_date="2023-10-03"
WGS         JBJJSV010000001-JBJJSV010000177
WGS_SCAFLD  NZ_JBJJSV010000001-NZ_JBJJSV010000177
//
LOCUS       NZ_JBJLLY010000000   5856857 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 941870, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLLY000000000
VERSION     NZ_JBJLLY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061678
            Assembly: GCF_045566735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5856857)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5856857)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLLY000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLLY000000000.  This version of the
            project (01) has the accession number NZ_JBJLLY010000000, and
            consists of sequences JBJLLY010000001-JBJLLY010000097.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.83
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045566735.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:32:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,853
            CDSs (total)                      :: 5,756
            Genes (coding)                    :: 5,620
            CDSs (with protein)               :: 5,620
            Genes (RNA)                       :: 97
            rRNAs                             :: 1, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 136
            CDSs (without protein)            :: 136
            Pseudo Genes (ambiguous residues) :: 0 of 136
            Pseudo Genes (frameshifted)       :: 59 of 136
            Pseudo Genes (incomplete)         :: 77 of 136
            Pseudo Genes (internal stop)      :: 26 of 136
            Pseudo Genes (multiple problems)  :: 20 of 136
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5856857
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="941870"
                     /isolation_source="RECTAL SWAB"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-05-22"
                     /collected_by="HUMS"
WGS         JBJLLY010000001-JBJLLY010000097
WGS_SCAFLD  NZ_JBJLLY010000001-NZ_JBJLLY010000097
//
LOCUS       NZ_JBJLNN010000000   5481541 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 1021096, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLNN000000000
VERSION     NZ_JBJLNN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061636
            Assembly: GCF_045570515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5481541)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5481541)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLNN000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLNN000000000.  This version of the
            project (01) has the accession number NZ_JBJLNN010000000, and
            consists of sequences JBJLNN010000001-JBJLNN010000108.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.41
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045570515.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:26:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,437
            CDSs (total)                      :: 5,343
            Genes (coding)                    :: 5,232
            CDSs (with protein)               :: 5,232
            Genes (RNA)                       :: 94
            rRNAs                             :: 1, 4, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 4, 7 (16S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 50 of 111
            Pseudo Genes (incomplete)         :: 66 of 111
            Pseudo Genes (internal stop)      :: 14 of 111
            Pseudo Genes (multiple problems)  :: 15 of 111
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5481541
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="1021096"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-09-22"
                     /collected_by="HUMS"
WGS         JBJLNN010000001-JBJLNN010000108
WGS_SCAFLD  NZ_JBJLNN010000001-NZ_JBJLNN010000108
//
LOCUS       NZ_JBIGMM010000000   5550621 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E324, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGMM000000000
VERSION     NZ_JBIGMM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130651
            Assembly: GCF_045572015.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5550621)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGMM000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGMM000000000.  This version of the
            project (01) has the accession number NZ_JBIGMM010000000, and
            consists of sequences JBIGMM010000001-JBIGMM010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 270x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045572015.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:20:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,445
            CDSs (total)                      :: 5,323
            Genes (coding)                    :: 5,193
            CDSs (with protein)               :: 5,193
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 130
            CDSs (without protein)            :: 130
            Pseudo Genes (ambiguous residues) :: 0 of 130
            Pseudo Genes (frameshifted)       :: 65 of 130
            Pseudo Genes (incomplete)         :: 64 of 130
            Pseudo Genes (internal stop)      :: 22 of 130
            Pseudo Genes (multiple problems)  :: 19 of 130
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5550621
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E324"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGMM010000001-JBIGMM010000007
WGS_SCAFLD  NZ_JBIGMM010000001-NZ_JBIGMM010000007
//
LOCUS       NZ_JBIGNM010000000   5772431 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E289, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGNM000000000
VERSION     NZ_JBIGNM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130620
            Assembly: GCF_045572545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5772431)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGNM000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGNM000000000.  This version of the
            project (01) has the accession number NZ_JBIGNM010000000, and
            consists of sequences JBIGNM010000001-JBIGNM010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 252x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045572545.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:35:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,748
            CDSs (total)                      :: 5,627
            Genes (coding)                    :: 5,430
            CDSs (with protein)               :: 5,430
            Genes (RNA)                       :: 121
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 197
            CDSs (without protein)            :: 197
            Pseudo Genes (ambiguous residues) :: 0 of 197
            Pseudo Genes (frameshifted)       :: 104 of 197
            Pseudo Genes (incomplete)         :: 109 of 197
            Pseudo Genes (internal stop)      :: 23 of 197
            Pseudo Genes (multiple problems)  :: 35 of 197
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5772431
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E289"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGNM010000001-JBIGNM010000008
WGS_SCAFLD  NZ_JBIGNM010000001-NZ_JBIGNM010000008
//
LOCUS       NZ_JBJLMA010000000   5778417 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 932969, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLMA000000000
VERSION     NZ_JBJLMA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061676
            Assembly: GCF_045566855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5778417)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5778417)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLMA000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLMA000000000.  This version of the
            project (01) has the accession number NZ_JBJLMA010000000, and
            consists of sequences JBJLMA010000001-JBJLMA010000281.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.81
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045566855.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:42:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,865
            CDSs (total)                      :: 5,773
            Genes (coding)                    :: 5,546
            CDSs (with protein)               :: 5,546
            Genes (RNA)                       :: 92
            rRNAs                             :: 1, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 3 (16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 227
            CDSs (without protein)            :: 227
            Pseudo Genes (ambiguous residues) :: 0 of 227
            Pseudo Genes (frameshifted)       :: 73 of 227
            Pseudo Genes (incomplete)         :: 153 of 227
            Pseudo Genes (internal stop)      :: 30 of 227
            Pseudo Genes (multiple problems)  :: 25 of 227
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5778417
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="932969"
                     /isolation_source="RECTAL SWAB"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-05-09"
                     /collected_by="HUMS"
WGS         JBJLMA010000001-JBJLMA010000281
WGS_SCAFLD  NZ_JBJLMA010000001-NZ_JBJLMA010000281
//
LOCUS       NZ_JBRWNU010000000   5462341 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain M3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBRWNU000000000
VERSION     NZ_JBRWNU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385099
            Assembly: GCF_056162025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5462341)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5462341)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWNU000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWNU000000000.  This version of the
            project (01) has the accession number NZ_JBRWNU010000000, and
            consists of sequences JBRWNU010000001-JBRWNU010000047.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162025.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:02:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,297
            CDSs (total)                      :: 5,222
            Genes (coding)                    :: 5,102
            CDSs (with protein)               :: 5,102
            Genes (RNA)                       :: 75
            rRNAs                             :: 2, 2 (5S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 61
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 120
            CDSs (without protein)            :: 120
            Pseudo Genes (ambiguous residues) :: 0 of 120
            Pseudo Genes (frameshifted)       :: 51 of 120
            Pseudo Genes (incomplete)         :: 67 of 120
            Pseudo Genes (internal stop)      :: 21 of 120
            Pseudo Genes (multiple problems)  :: 17 of 120
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5462341
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="M3"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982753 N 116.360012 E"
                     /collection_date="2021-02-24"
                     /collected_by="Ping Yang"
                     /genotype="ST268"
WGS         JBRWNU010000001-JBRWNU010000047
WGS_SCAFLD  NZ_JBRWNU010000001-NZ_JBRWNU010000047
//
LOCUS       NZ_JBIGPQ010000000   5570406 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E188, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGPQ000000000
VERSION     NZ_JBIGPQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130535
            Assembly: GCF_045573715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5570406)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGPQ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGPQ000000000.  This version of the
            project (01) has the accession number NZ_JBIGPQ010000000, and
            consists of sequences JBIGPQ010000001-JBIGPQ010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 231x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045573715.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:37:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,471
            CDSs (total)                      :: 5,350
            Genes (coding)                    :: 5,216
            CDSs (with protein)               :: 5,216
            Genes (RNA)                       :: 121
            rRNAs                             :: 9, 8, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 9 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 134
            CDSs (without protein)            :: 134
            Pseudo Genes (ambiguous residues) :: 0 of 134
            Pseudo Genes (frameshifted)       :: 69 of 134
            Pseudo Genes (incomplete)         :: 67 of 134
            Pseudo Genes (internal stop)      :: 18 of 134
            Pseudo Genes (multiple problems)  :: 18 of 134
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5570406
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E188"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGPQ010000001-JBIGPQ010000005
WGS_SCAFLD  NZ_JBIGPQ010000001-NZ_JBIGPQ010000005
//
LOCUS       NZ_JBRWNP010000000   5664001 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 21P1300, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWNP000000000
VERSION     NZ_JBRWNP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385104
            Assembly: GCF_056161905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5664001)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5664001)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWNP000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWNP000000000.  This version of the
            project (01) has the accession number NZ_JBRWNP010000000, and
            consists of sequences JBRWNP010000001-JBRWNP010000147.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161905.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:01:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,746
            CDSs (total)                      :: 5,670
            Genes (coding)                    :: 5,487
            CDSs (with protein)               :: 5,487
            Genes (RNA)                       :: 76
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 183
            CDSs (without protein)            :: 183
            Pseudo Genes (ambiguous residues) :: 0 of 183
            Pseudo Genes (frameshifted)       :: 57 of 183
            Pseudo Genes (incomplete)         :: 129 of 183
            Pseudo Genes (internal stop)      :: 26 of 183
            Pseudo Genes (multiple problems)  :: 23 of 183
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5664001
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="21P1300"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982758 N 116.360012 E"
                     /collection_date="2021-12-04"
                     /collected_by="Ping Yang"
                     /genotype="ST11"
WGS         JBRWNP010000001-JBRWNP010000147
WGS_SCAFLD  NZ_JBRWNP010000001-NZ_JBRWNP010000147
//
LOCUS       NZ_JBIGQJ010000000   5740249 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E156, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGQJ000000000
VERSION     NZ_JBIGQJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130505
            Assembly: GCF_045574065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5740249)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGQJ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGQJ000000000.  This version of the
            project (01) has the accession number NZ_JBIGQJ010000000, and
            consists of sequences JBIGQJ010000001-JBIGQJ010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 737x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045574065.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:37:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,635
            CDSs (total)                      :: 5,511
            Genes (coding)                    :: 5,326
            CDSs (with protein)               :: 5,326
            Genes (RNA)                       :: 124
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 185
            CDSs (without protein)            :: 185
            Pseudo Genes (ambiguous residues) :: 0 of 185
            Pseudo Genes (frameshifted)       :: 104 of 185
            Pseudo Genes (incomplete)         :: 90 of 185
            Pseudo Genes (internal stop)      :: 18 of 185
            Pseudo Genes (multiple problems)  :: 24 of 185
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5740249
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E156"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGQJ010000001-JBIGQJ010000008
WGS_SCAFLD  NZ_JBIGQJ010000001-NZ_JBIGQJ010000008
//
LOCUS       NZ_JBJLMN010000000   5813839 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 882410, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLMN000000000
VERSION     NZ_JBJLMN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061663
            Assembly: GCF_045566515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5813839)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5813839)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLMN000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLMN000000000.  This version of the
            project (01) has the accession number NZ_JBJLMN010000000, and
            consists of sequences JBJLMN010000001-JBJLMN010000159.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.68
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045566515.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:33:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,764
            CDSs (total)                      :: 5,681
            Genes (coding)                    :: 5,537
            CDSs (with protein)               :: 5,537
            Genes (RNA)                       :: 83
            rRNAs                             :: 1, 4, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 4, 3 (16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 144
            CDSs (without protein)            :: 144
            Pseudo Genes (ambiguous residues) :: 0 of 144
            Pseudo Genes (frameshifted)       :: 60 of 144
            Pseudo Genes (incomplete)         :: 89 of 144
            Pseudo Genes (internal stop)      :: 22 of 144
            Pseudo Genes (multiple problems)  :: 23 of 144
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5813839
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="882410"
                     /isolation_source="RECTAL SWAB"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-02-23"
                     /collected_by="HUMS"
WGS         JBJLMN010000001-JBJLMN010000159
WGS_SCAFLD  NZ_JBJLMN010000001-NZ_JBJLMN010000159
//
LOCUS       NZ_JBRWNI010000000   5641614 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain PE331274, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWNI000000000
VERSION     NZ_JBRWNI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385111
            Assembly: GCF_056161785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5641614)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5641614)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWNI000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWNI000000000.  This version of the
            project (01) has the accession number NZ_JBRWNI010000000, and
            consists of sequences JBRWNI010000001-JBRWNI010000109.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161785.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:03:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,728
            CDSs (total)                      :: 5,649
            Genes (coding)                    :: 5,516
            CDSs (with protein)               :: 5,516
            Genes (RNA)                       :: 79
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 47 of 133
            Pseudo Genes (incomplete)         :: 88 of 133
            Pseudo Genes (internal stop)      :: 19 of 133
            Pseudo Genes (multiple problems)  :: 17 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5641614
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="PE331274"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982765 N 116.360012 E"
                     /collection_date="2023-04-17"
                     /collected_by="Ping Yang"
                     /genotype="ST11"
WGS         JBRWNI010000001-JBRWNI010000109
WGS_SCAFLD  NZ_JBRWNI010000001-NZ_JBRWNI010000109
//
LOCUS       NZ_JBIGRM010000000   5838453 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E114, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGRM000000000
VERSION     NZ_JBIGRM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130467
            Assembly: GCF_045574725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5838453)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGRM000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGRM000000000.  This version of the
            project (01) has the accession number NZ_JBIGRM010000000, and
            consists of sequences JBIGRM010000001-JBIGRM010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 109x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045574725.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:40:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,845
            CDSs (total)                      :: 5,723
            Genes (coding)                    :: 5,476
            CDSs (with protein)               :: 5,476
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 247
            CDSs (without protein)            :: 247
            Pseudo Genes (ambiguous residues) :: 0 of 247
            Pseudo Genes (frameshifted)       :: 140 of 247
            Pseudo Genes (incomplete)         :: 111 of 247
            Pseudo Genes (internal stop)      :: 43 of 247
            Pseudo Genes (multiple problems)  :: 39 of 247
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5838453
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E114"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGRM010000001-JBIGRM010000008
WGS_SCAFLD  NZ_JBIGRM010000001-NZ_JBIGRM010000008
//
LOCUS       NZ_JBIGTG010000000   5705996 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E43, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGTG000000000
VERSION     NZ_JBIGTG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130406
            Assembly: GCF_045575615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5705996)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGTG000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGTG000000000.  This version of the
            project (01) has the accession number NZ_JBIGTG010000000, and
            consists of sequences JBIGTG010000001-JBIGTG010000010.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 131x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575615.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:03:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,614
            CDSs (total)                      :: 5,489
            Genes (coding)                    :: 5,294
            CDSs (with protein)               :: 5,294
            Genes (RNA)                       :: 125
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 195
            CDSs (without protein)            :: 195
            Pseudo Genes (ambiguous residues) :: 0 of 195
            Pseudo Genes (frameshifted)       :: 119 of 195
            Pseudo Genes (incomplete)         :: 78 of 195
            Pseudo Genes (internal stop)      :: 23 of 195
            Pseudo Genes (multiple problems)  :: 20 of 195
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5705996
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E43"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGTG010000001-JBIGTG010000010
WGS_SCAFLD  NZ_JBIGTG010000001-NZ_JBIGTG010000010
//
LOCUS       NZ_JBJLML010000000   5526505 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 885949, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLML000000000
VERSION     NZ_JBJLML000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061665
            Assembly: GCF_045566595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5526505)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5526505)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLML000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLML000000000.  This version of the
            project (01) has the accession number NZ_JBJLML010000000, and
            consists of sequences JBJLML010000001-JBJLML010000137.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.70
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045566595.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:23:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,536
            CDSs (total)                      :: 5,480
            Genes (coding)                    :: 5,365
            CDSs (with protein)               :: 5,365
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 4, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 4, 3 (16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 115
            CDSs (without protein)            :: 115
            Pseudo Genes (ambiguous residues) :: 0 of 115
            Pseudo Genes (frameshifted)       :: 50 of 115
            Pseudo Genes (incomplete)         :: 70 of 115
            Pseudo Genes (internal stop)      :: 14 of 115
            Pseudo Genes (multiple problems)  :: 16 of 115
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5526505
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="885949"
                     /isolation_source="RECTAL SWAB"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-02-28"
                     /collected_by="HUMS"
WGS         JBJLML010000001-JBJLML010000137
WGS_SCAFLD  NZ_JBJLML010000001-NZ_JBJLML010000137
//
LOCUS       NZ_JBRWNV010000000   5469291 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain PEKP4201, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWNV000000000
VERSION     NZ_JBRWNV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385098
            Assembly: GCF_056162045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5469291)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5469291)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWNV000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWNV000000000.  This version of the
            project (01) has the accession number NZ_JBRWNV010000000, and
            consists of sequences JBRWNV010000001-JBRWNV010000118.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162045.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:08:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,482
            CDSs (total)                      :: 5,406
            Genes (coding)                    :: 5,277
            CDSs (with protein)               :: 5,277
            Genes (RNA)                       :: 76
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 129
            CDSs (without protein)            :: 129
            Pseudo Genes (ambiguous residues) :: 0 of 129
            Pseudo Genes (frameshifted)       :: 37 of 129
            Pseudo Genes (incomplete)         :: 93 of 129
            Pseudo Genes (internal stop)      :: 16 of 129
            Pseudo Genes (multiple problems)  :: 14 of 129
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5469291
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="PEKP4201"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982752 N 116.360012 E"
                     /collection_date="2021-02-24"
                     /collected_by="Ping Yang"
                     /genotype="ST11"
WGS         JBRWNV010000001-JBRWNV010000118
WGS_SCAFLD  NZ_JBRWNV010000001-NZ_JBRWNV010000118
//
LOCUS       NZ_JBIGTZ010000000   5760740 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGTZ000000000
VERSION     NZ_JBIGTZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130371
            Assembly: GCF_045576015.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5760740)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGTZ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGTZ000000000.  This version of the
            project (01) has the accession number NZ_JBIGTZ010000000, and
            consists of sequences JBIGTZ010000001-JBIGTZ010000011.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 319x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045576015.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:04:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,764
            CDSs (total)                      :: 5,640
            Genes (coding)                    :: 5,427
            CDSs (with protein)               :: 5,427
            Genes (RNA)                       :: 124
            rRNAs                             :: 9, 9, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 213
            CDSs (without protein)            :: 213
            Pseudo Genes (ambiguous residues) :: 0 of 213
            Pseudo Genes (frameshifted)       :: 121 of 213
            Pseudo Genes (incomplete)         :: 113 of 213
            Pseudo Genes (internal stop)      :: 22 of 213
            Pseudo Genes (multiple problems)  :: 38 of 213
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5760740
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E2"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGTZ010000001-JBIGTZ010000011
WGS_SCAFLD  NZ_JBIGTZ010000001-NZ_JBIGTZ010000011
//
LOCUS       NZ_JBJLMB010000000   5840473 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 931183, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLMB000000000
VERSION     NZ_JBJLMB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061675
            Assembly: GCF_045566835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5840473)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5840473)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLMB000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLMB000000000.  This version of the
            project (01) has the accession number NZ_JBJLMB010000000, and
            consists of sequences JBJLMB010000001-JBJLMB010000105.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.80
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045566835.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:36:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,827
            CDSs (total)                      :: 5,745
            Genes (coding)                    :: 5,604
            CDSs (with protein)               :: 5,604
            Genes (RNA)                       :: 82
            rRNAs                             :: 1, 4, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 4, 1 (16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 141
            CDSs (without protein)            :: 141
            Pseudo Genes (ambiguous residues) :: 0 of 141
            Pseudo Genes (frameshifted)       :: 58 of 141
            Pseudo Genes (incomplete)         :: 82 of 141
            Pseudo Genes (internal stop)      :: 26 of 141
            Pseudo Genes (multiple problems)  :: 19 of 141
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5840473
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="931183"
                     /isolation_source="RECTAL SWAB"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-05-05"
                     /collected_by="HUMS"
WGS         JBJLMB010000001-JBJLMB010000105
WGS_SCAFLD  NZ_JBJLMB010000001-NZ_JBJLMB010000105
//
LOCUS       NZ_JBRWNM010000000   5692915 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain PE23846, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWNM000000000
VERSION     NZ_JBRWNM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385107
            Assembly: GCF_056161865.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5692915)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5692915)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWNM000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWNM000000000.  This version of the
            project (01) has the accession number NZ_JBRWNM010000000, and
            consists of sequences JBRWNM010000001-JBRWNM010000109.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161865.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:07:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,732
            CDSs (total)                      :: 5,653
            Genes (coding)                    :: 5,523
            CDSs (with protein)               :: 5,523
            Genes (RNA)                       :: 79
            rRNAs                             :: 2, 3 (5S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 65
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 130
            CDSs (without protein)            :: 130
            Pseudo Genes (ambiguous residues) :: 0 of 130
            Pseudo Genes (frameshifted)       :: 46 of 130
            Pseudo Genes (incomplete)         :: 86 of 130
            Pseudo Genes (internal stop)      :: 20 of 130
            Pseudo Genes (multiple problems)  :: 19 of 130
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5692915
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="PE23846"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982761 N 116.360012 E"
                     /collection_date="2023-03-03"
                     /collected_by="Ping Yang"
                     /genotype="ST11"
WGS         JBRWNM010000001-JBRWNM010000109
WGS_SCAFLD  NZ_JBRWNM010000001-NZ_JBRWNM010000109
//
LOCUS       NZ_JBIXAA010000000   5812362 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1203, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXAA000000000
VERSION     NZ_JBIXAA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247353
            Assembly: GCF_045618905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5812362)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXAA000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXAA000000000.  This version of the
            project (01) has the accession number NZ_JBIXAA010000000, and
            consists of sequences JBIXAA010000001-JBIXAA010000055.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 326x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045618905.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:38:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,725
            CDSs (total)                      :: 5,630
            Genes (coding)                    :: 5,382
            CDSs (with protein)               :: 5,382
            Genes (RNA)                       :: 95
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 248
            CDSs (without protein)            :: 248
            Pseudo Genes (ambiguous residues) :: 0 of 248
            Pseudo Genes (frameshifted)       :: 142 of 248
            Pseudo Genes (incomplete)         :: 115 of 248
            Pseudo Genes (internal stop)      :: 33 of 248
            Pseudo Genes (multiple problems)  :: 37 of 248
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5812362
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1203"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXAA010000001-JBIXAA010000055
WGS_SCAFLD  NZ_JBIXAA010000001-NZ_JBIXAA010000055
//
LOCUS       NZ_JBIXCM010000000   5660247 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1128, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXCM000000000
VERSION     NZ_JBIXCM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247289
            Assembly: GCF_045620205.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5660247)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXCM000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXCM000000000.  This version of the
            project (01) has the accession number NZ_JBIXCM010000000, and
            consists of sequences JBIXCM010000001-JBIXCM010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 261x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045620205.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:50:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,642
            CDSs (total)                      :: 5,520
            Genes (coding)                    :: 5,336
            CDSs (with protein)               :: 5,336
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 9, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 8 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 184
            CDSs (without protein)            :: 184
            Pseudo Genes (ambiguous residues) :: 0 of 184
            Pseudo Genes (frameshifted)       :: 109 of 184
            Pseudo Genes (incomplete)         :: 77 of 184
            Pseudo Genes (internal stop)      :: 25 of 184
            Pseudo Genes (multiple problems)  :: 23 of 184
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5660247
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1128"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXCM010000001-JBIXCM010000007
WGS_SCAFLD  NZ_JBIXCM010000001-NZ_JBIXCM010000007
//
LOCUS       NZ_QGHI01000000      5320309 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain HPCN5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_QGHI00000000
VERSION     NZ_QGHI00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09223500
            Assembly: GCF_003171755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5320309)
  AUTHORS   Dafale,N., Hathi,Z.J., Srivastava,S. and Purohit,H.J.
  TITLE     Klebsiella pneumonia HPCN5 having efficient cellulolytic activity
            and oligotrophic potential used in efficient COD removal process
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5320309)
  AUTHORS   Dafale,N., Hathi,Z.J., Srivastava,S. and Purohit,H.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2018) Environmental Biotechnology and Genomics
            Division, CSIR- National Environmental Engineering Research
            Institute, CSIR-NEERI, Nehru marg, Nagpur 440020, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QGHI00000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_QGHI00000000.  This version of the project
            (01) has the accession number NZ_QGHI01000000, and consists of
            sequences QGHI01000001-QGHI01000477.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2016
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 20.0x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003171755.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:21:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,324
            CDSs (total)                      :: 5,224
            Genes (coding)                    :: 5,090
            CDSs (with protein)               :: 5,090
            Genes (RNA)                       :: 100
            rRNAs                             :: 9, 4, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 3, 2 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 134
            CDSs (without protein)            :: 134
            Pseudo Genes (ambiguous residues) :: 0 of 134
            Pseudo Genes (frameshifted)       :: 47 of 134
            Pseudo Genes (incomplete)         :: 90 of 134
            Pseudo Genes (internal stop)      :: 14 of 134
            Pseudo Genes (multiple problems)  :: 15 of 134
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5320309
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="HPCN5"
                     /isolation_source="Domestic sewage"
                     /db_xref="taxon:573"
                     /geo_loc_name="India: Nagpur"
                     /collection_date="2016"
WGS         QGHI01000001-QGHI01000477
WGS_SCAFLD  NZ_QGHI01000001-NZ_QGHI01000477
//
LOCUS       NZ_JAAFDC010000000   5680526 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 6-57, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAAFDC000000000
VERSION     NZ_JAAFDC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13915714
            Assembly: GCF_016643205.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5680526)
  AUTHORS   Hernandez-Garcia,M., Garcia-Fernandez,S., Garcia-Castillo,M.,
            Melo-Cristino,J., Pinto,M.F., Goncalves,E., Alves,V., Costa,E.,
            Ramalheira,E., Sancho,L., Diogo,J., Ferreira,R., Silva,T.,
            Chaves,C., Passaro,L., Paixao,L., Romano,J. and Canton,R.
  CONSRTM   STEP study group
  TITLE     Confronting Ceftolozane-Tazobactam Susceptibility in
            Multidrug-Resistant Enterobacterales Isolates and Whole-Genome
            Sequencing Results (STEP Study)
  JOURNAL   Int J Antimicrob Agents 57 (2), 106259 (2021)
   PUBMED   33310115
REFERENCE   2  (bases 1 to 5680526)
  AUTHORS   Hernandez-Garcia,M., Canton,R., Passaro,L., Moura,C. and Romano,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-JAN-2020) Microbiology, Hospital Universitario Ramon
            y Cajal (IRYCIS), Carretera de Colmenar Viejo Km 9.1, Madrid,
            Madrid 28034, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAAFDC000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JAAFDC000000000.  This version of the
            project (01) has the accession number NZ_JAAFDC010000000, and
            consists of sequences JAAFDC010000001-JAAFDC010000121.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date             :: SEP-2019
            Assembly Method           :: SPAdes v. 3.11.1
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: GCF_000220485.1
            Genome Coverage           :: 159x
            Sequencing Technology     :: Illumina HiSeq4000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_016643205.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:35:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,692
            CDSs (total)                      :: 5,595
            Genes (coding)                    :: 5,466
            CDSs (with protein)               :: 5,466
            Genes (RNA)                       :: 97
            rRNAs                             :: 2, 4, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 5 (16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 129
            CDSs (without protein)            :: 129
            Pseudo Genes (ambiguous residues) :: 0 of 129
            Pseudo Genes (frameshifted)       :: 49 of 129
            Pseudo Genes (incomplete)         :: 81 of 129
            Pseudo Genes (internal stop)      :: 15 of 129
            Pseudo Genes (multiple problems)  :: 13 of 129
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5680526
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="6-57"
                     /isolation_source="Urinary Tract Infection"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Portugal: Porto"
                     /collected_by="CH Porto"
                     /genotype="ST307"
WGS         JAAFDC010000001-JAAFDC010000121
WGS_SCAFLD  NZ_JAAFDC010000001-NZ_JAAFDC010000121
//
LOCUS       NZ_JBRWNJ010000000   5751950 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain PE291099, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWNJ000000000
VERSION     NZ_JBRWNJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385110
            Assembly: GCF_056161805.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5751950)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5751950)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWNJ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWNJ000000000.  This version of the
            project (01) has the accession number NZ_JBRWNJ010000000, and
            consists of sequences JBRWNJ010000001-JBRWNJ010000038.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161805.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:12:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,700
            CDSs (total)                      :: 5,625
            Genes (coding)                    :: 5,506
            CDSs (with protein)               :: 5,506
            Genes (RNA)                       :: 75
            rRNAs                             :: 2, 2 (5S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 60
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 119
            CDSs (without protein)            :: 119
            Pseudo Genes (ambiguous residues) :: 0 of 119
            Pseudo Genes (frameshifted)       :: 48 of 119
            Pseudo Genes (incomplete)         :: 74 of 119
            Pseudo Genes (internal stop)      :: 19 of 119
            Pseudo Genes (multiple problems)  :: 17 of 119
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5751950
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="PE291099"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982764 N 116.360012 E"
                     /collection_date="2023-03-21"
                     /collected_by="Ping Yang"
                     /genotype="ST873"
WGS         JBRWNJ010000001-JBRWNJ010000038
WGS_SCAFLD  NZ_JBRWNJ010000001-NZ_JBRWNJ010000038
//
LOCUS       NZ_JARCXR010000000   5488332 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain MGL_81_B5, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JARCXR000000000
VERSION     NZ_JARCXR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32745644
            Assembly: GCF_036530515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5488332)
  AUTHORS   Das,B.
  TITLE     Heterogeneity in antimicrobial resistance traits among multidrug
            resitant Gram-negative bacterial pathogens isolated from India:
            phenotypic, genotypic and proteomic analyses
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5488332)
  AUTHORS   Das,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JAN-2023) Infection and Immunology, Translational
            Health Science and Technology Institute, Gurgaon-Faridabad
            expressway, Faridabad, Haryana 121001, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARCXR000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JARCXR000000000.  This version of the
            project (01) has the accession number NZ_JARCXR010000000, and
            consists of sequences JARCXR010000001-JARCXR010000126.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 18x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_036530515.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:50:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,388
            CDSs (total)                      :: 5,297
            Genes (coding)                    :: 5,148
            CDSs (with protein)               :: 5,148
            Genes (RNA)                       :: 91
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 80
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 149
            CDSs (without protein)            :: 149
            Pseudo Genes (ambiguous residues) :: 0 of 149
            Pseudo Genes (frameshifted)       :: 71 of 149
            Pseudo Genes (incomplete)         :: 86 of 149
            Pseudo Genes (internal stop)      :: 24 of 149
            Pseudo Genes (multiple problems)  :: 27 of 149
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5488332
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="MGL_81_B5"
                     /isolation_source="E.T Tube aspirate"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="India: Chattisgarh, Jan Swasthya Sahyog"
                     /lat_lon="21.27 N 81.86 E"
                     /collection_date="2020-06-15"
                     /collected_by="THSTI-Molecular Genetics Laboratory"
WGS         JARCXR010000001-JARCXR010000126
WGS_SCAFLD  NZ_JARCXR010000001-NZ_JARCXR010000126
//
LOCUS       NZ_JBRWNW010000000   5806293 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 223, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBRWNW000000000
VERSION     NZ_JBRWNW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385097
            Assembly: GCF_056162065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5806293)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5806293)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWNW000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWNW000000000.  This version of the
            project (01) has the accession number NZ_JBRWNW010000000, and
            consists of sequences JBRWNW010000001-JBRWNW010000103.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162065.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:12:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,884
            CDSs (total)                      :: 5,805
            Genes (coding)                    :: 5,641
            CDSs (with protein)               :: 5,641
            Genes (RNA)                       :: 79
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 164
            CDSs (without protein)            :: 164
            Pseudo Genes (ambiguous residues) :: 0 of 164
            Pseudo Genes (frameshifted)       :: 61 of 164
            Pseudo Genes (incomplete)         :: 113 of 164
            Pseudo Genes (internal stop)      :: 24 of 164
            Pseudo Genes (multiple problems)  :: 30 of 164
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5806293
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="223"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982751 N 116.360012 E"
                     /collection_date="2020-12-07"
                     /collected_by="Ping Yang"
                     /genotype="ST11"
WGS         JBRWNW010000001-JBRWNW010000103
WGS_SCAFLD  NZ_JBRWNW010000001-NZ_JBRWNW010000103
//
LOCUS       NZ_CAXOCJ010000000   5408740 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain FFDD-591864-L641 isolate
            FFDD_591864-L641, whole genome shotgun sequencing project.
ACCESSION   NZ_CAXOCJ000000000
VERSION     NZ_CAXOCJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA115874763
            Sequence Read Archive: ERR13420965
            Assembly: GCF_964207675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5408740)
  AUTHORS   Kumburu,H.H., Sonda,T.B. and van Zwetselaar,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-JUL-2024) Kilimanjaro Clinical Research Institute,
            Moshi, Kilimanjaro, Tanzania
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAXOCJ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_CAXOCJ000000000.  This version of the
            project (01) has the accession number NZ_CAXOCJ010000000, and
            consists of sequences CAXOCJ010000001-CAXOCJ010000101.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964207675.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:15:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,318
            CDSs (total)                      :: 5,237
            Genes (coding)                    :: 5,139
            CDSs (with protein)               :: 5,139
            Genes (RNA)                       :: 81
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 98
            CDSs (without protein)            :: 98
            Pseudo Genes (ambiguous residues) :: 0 of 98
            Pseudo Genes (frameshifted)       :: 43 of 98
            Pseudo Genes (incomplete)         :: 59 of 98
            Pseudo Genes (internal stop)      :: 13 of 98
            Pseudo Genes (multiple problems)  :: 14 of 98
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5408740
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="FFDD-591864-L641"
                     /isolate="FFDD_591864-L641"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Tanzania"
                     /collection_date="2021"
                     /collected_by="Dodoma Regional Referral Hospital"
WGS         CAXOCJ010000001-CAXOCJ010000101
WGS_SCAFLD  NZ_CAXOCJ010000001-NZ_CAXOCJ010000101
//
LOCUS       NZ_JBRWNS010000000   5902816 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 21P947, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWNS000000000
VERSION     NZ_JBRWNS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385101
            Assembly: GCF_056161965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5902816)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5902816)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWNS000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWNS000000000.  This version of the
            project (01) has the accession number NZ_JBRWNS010000000, and
            consists of sequences JBRWNS010000001-JBRWNS010000128.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161965.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:14:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,059
            CDSs (total)                      :: 5,971
            Genes (coding)                    :: 5,800
            CDSs (with protein)               :: 5,800
            Genes (RNA)                       :: 88
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 171
            CDSs (without protein)            :: 171
            Pseudo Genes (ambiguous residues) :: 0 of 171
            Pseudo Genes (frameshifted)       :: 62 of 171
            Pseudo Genes (incomplete)         :: 117 of 171
            Pseudo Genes (internal stop)      :: 25 of 171
            Pseudo Genes (multiple problems)  :: 29 of 171
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5902816
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="21P947"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982755 N 116.360012 E"
                     /collection_date="2021-08-04"
                     /collected_by="Ping Yang"
                     /genotype="ST11"
WGS         JBRWNS010000001-JBRWNS010000128
WGS_SCAFLD  NZ_JBRWNS010000001-NZ_JBRWNS010000128
//
LOCUS       NZ_JBFUPC010000000   5660981 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 31FC, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBFUPC000000000
VERSION     NZ_JBFUPC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN42912224
            Assembly: GCF_041061565.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5660981)
  AUTHORS   Gaibani,P. and Secci,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-JUL-2024) Diagnostics and Public Health, Section of
            Microbiology, University of Verona, Italy, Strada le grazie, 8,
            Verona 37134, Italy
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBFUPC000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBFUPC000000000.  This version of the
            project (01) has the accession number NZ_JBFUPC010000000, and
            consists of sequences JBFUPC010000001-JBFUPC010000134.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v. 3.16.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 99x
            Sequencing Technology  :: Illumina iSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_041061565.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:08:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,786
            CDSs (total)                      :: 5,668
            Genes (coding)                    :: 5,526
            CDSs (with protein)               :: 5,526
            Genes (RNA)                       :: 118
            rRNAs                             :: 11, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 5 (5S)
            partial rRNAs                     :: 6, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 142
            CDSs (without protein)            :: 142
            Pseudo Genes (ambiguous residues) :: 0 of 142
            Pseudo Genes (frameshifted)       :: 47 of 142
            Pseudo Genes (incomplete)         :: 102 of 142
            Pseudo Genes (internal stop)      :: 15 of 142
            Pseudo Genes (multiple problems)  :: 19 of 142
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5660981
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="31FC"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Italy: Torino"
                     /lat_lon="45.04595651 N 7.67493876 E"
                     /collection_date="2022"
                     /collected_by="Azienda ospedaliero universitaria Torino"
WGS         JBFUPC010000001-JBFUPC010000134
WGS_SCAFLD  NZ_JBFUPC010000001-NZ_JBFUPC010000134
//
LOCUS       NZ_JBRWNX010000000   5662617 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 114, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBRWNX000000000
VERSION     NZ_JBRWNX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385096
            Assembly: GCF_056162085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5662617)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5662617)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWNX000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWNX000000000.  This version of the
            project (01) has the accession number NZ_JBRWNX010000000, and
            consists of sequences JBRWNX010000001-JBRWNX010000099.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162085.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:12:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,712
            CDSs (total)                      :: 5,636
            Genes (coding)                    :: 5,490
            CDSs (with protein)               :: 5,490
            Genes (RNA)                       :: 76
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 146
            CDSs (without protein)            :: 146
            Pseudo Genes (ambiguous residues) :: 0 of 146
            Pseudo Genes (frameshifted)       :: 58 of 146
            Pseudo Genes (incomplete)         :: 97 of 146
            Pseudo Genes (internal stop)      :: 24 of 146
            Pseudo Genes (multiple problems)  :: 30 of 146
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5662617
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="114"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982750 N 116.360012 E"
                     /collection_date="2020-10-30"
                     /collected_by="Ping Yang"
                     /genotype="ST11"
WGS         JBRWNX010000001-JBRWNX010000099
WGS_SCAFLD  NZ_JBRWNX010000001-NZ_JBRWNX010000099
//
LOCUS       NZ_JBIXDT010000000   5720937 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1093, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXDT000000000
VERSION     NZ_JBIXDT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247256
            Assembly: GCF_045620845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5720937)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXDT000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXDT000000000.  This version of the
            project (01) has the accession number NZ_JBIXDT010000000, and
            consists of sequences JBIXDT010000001-JBIXDT010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 143x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045620845.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:51:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,597
            CDSs (total)                      :: 5,473
            Genes (coding)                    :: 5,306
            CDSs (with protein)               :: 5,306
            Genes (RNA)                       :: 124
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 167
            CDSs (without protein)            :: 167
            Pseudo Genes (ambiguous residues) :: 0 of 167
            Pseudo Genes (frameshifted)       :: 85 of 167
            Pseudo Genes (incomplete)         :: 88 of 167
            Pseudo Genes (internal stop)      :: 30 of 167
            Pseudo Genes (multiple problems)  :: 33 of 167
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5720937
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1093"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXDT010000001-JBIXDT010000004
WGS_SCAFLD  NZ_JBIXDT010000001-NZ_JBIXDT010000004
//
LOCUS       NZ_JBJJTA010000000   5586683 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain Sy164613A, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJJTA000000000
VERSION     NZ_JBJJTA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44729020
            Assembly: GCF_045504295.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5586683)
  AUTHORS   Wang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) Laboratory medicine department, The Third
            People's Hospital of Shenzhen, 29 Bulan Road, Shenzhen, Guangdong
            518000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJJTA000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJJTA000000000.  This version of the
            project (01) has the accession number NZ_JBJJTA010000000, and
            consists of sequences JBJJTA010000001-JBJJTA010000077.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045504295.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:09:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,567
            CDSs (total)                      :: 5,443
            Genes (coding)                    :: 5,322
            CDSs (with protein)               :: 5,322
            Genes (RNA)                       :: 124
            rRNAs                             :: 9, 13, 10 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 7, 13, 10 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 121
            CDSs (without protein)            :: 121
            Pseudo Genes (ambiguous residues) :: 0 of 121
            Pseudo Genes (frameshifted)       :: 55 of 121
            Pseudo Genes (incomplete)         :: 73 of 121
            Pseudo Genes (internal stop)      :: 20 of 121
            Pseudo Genes (multiple problems)  :: 23 of 121
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5586683
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="Sy164613A"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China: Shenzhen"
                     /collection_date="2023-11-26"
WGS         JBJJTA010000001-JBJJTA010000077
WGS_SCAFLD  NZ_JBJJTA010000001-NZ_JBJJTA010000077
//
LOCUS       NZ_JBJLMP010000000   5911448 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 844839, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLMP000000000
VERSION     NZ_JBJLMP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061661
            Assembly: GCF_045569975.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5911448)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5911448)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLMP000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLMP000000000.  This version of the
            project (01) has the accession number NZ_JBJLMP010000000, and
            consists of sequences JBJLMP010000001-JBJLMP010000167.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.66
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045569975.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:32:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,032
            CDSs (total)                      :: 5,940
            Genes (coding)                    :: 5,791
            CDSs (with protein)               :: 5,791
            Genes (RNA)                       :: 92
            rRNAs                             :: 1, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 3 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 149
            CDSs (without protein)            :: 149
            Pseudo Genes (ambiguous residues) :: 0 of 149
            Pseudo Genes (frameshifted)       :: 60 of 149
            Pseudo Genes (incomplete)         :: 91 of 149
            Pseudo Genes (internal stop)      :: 29 of 149
            Pseudo Genes (multiple problems)  :: 27 of 149
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5911448
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="844839"
                     /isolation_source="SURGICAL WOUND"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-01-03"
                     /collected_by="HUMS"
WGS         JBJLMP010000001-JBJLMP010000167
WGS_SCAFLD  NZ_JBJLMP010000001-NZ_JBJLMP010000167
//
LOCUS       NZ_JBIXFK010000000   5796914 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1042, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXFK000000000
VERSION     NZ_JBIXFK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247213
            Assembly: GCF_045621705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5796914)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXFK000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXFK000000000.  This version of the
            project (01) has the accession number NZ_JBIXFK010000000, and
            consists of sequences JBIXFK010000001-JBIXFK010000016.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 294x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045621705.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:36:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,864
            CDSs (total)                      :: 5,739
            Genes (coding)                    :: 5,406
            CDSs (with protein)               :: 5,406
            Genes (RNA)                       :: 125
            rRNAs                             :: 9, 9, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 333
            CDSs (without protein)            :: 333
            Pseudo Genes (ambiguous residues) :: 0 of 333
            Pseudo Genes (frameshifted)       :: 188 of 333
            Pseudo Genes (incomplete)         :: 166 of 333
            Pseudo Genes (internal stop)      :: 29 of 333
            Pseudo Genes (multiple problems)  :: 46 of 333
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5796914
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1042"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXFK010000001-JBIXFK010000016
WGS_SCAFLD  NZ_JBIXFK010000001-NZ_JBIXFK010000016
//
LOCUS       NZ_JBIXDV010000000   5671522 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1091, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXDV000000000
VERSION     NZ_JBIXDV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247254
            Assembly: GCF_045620925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5671522)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXDV000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXDV000000000.  This version of the
            project (01) has the accession number NZ_JBIXDV010000000, and
            consists of sequences JBIXDV010000001-JBIXDV010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 189x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045620925.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:50:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,691
            CDSs (total)                      :: 5,569
            Genes (coding)                    :: 5,402
            CDSs (with protein)               :: 5,402
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 167
            CDSs (without protein)            :: 167
            Pseudo Genes (ambiguous residues) :: 0 of 167
            Pseudo Genes (frameshifted)       :: 85 of 167
            Pseudo Genes (incomplete)         :: 82 of 167
            Pseudo Genes (internal stop)      :: 20 of 167
            Pseudo Genes (multiple problems)  :: 18 of 167
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5671522
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1091"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXDV010000001-JBIXDV010000007
WGS_SCAFLD  NZ_JBIXDV010000001-NZ_JBIXDV010000007
//
LOCUS       NZ_JBIXEU010000000   5990224 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1059, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXEU000000000
VERSION     NZ_JBIXEU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247229
            Assembly: GCF_045621435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5990224)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXEU000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXEU000000000.  This version of the
            project (01) has the accession number NZ_JBIXEU010000000, and
            consists of sequences JBIXEU010000001-JBIXEU010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 282x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045621435.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:46:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,928
            CDSs (total)                      :: 5,805
            Genes (coding)                    :: 5,543
            CDSs (with protein)               :: 5,543
            Genes (RNA)                       :: 123
            rRNAs                             :: 9, 9, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 262
            CDSs (without protein)            :: 262
            Pseudo Genes (ambiguous residues) :: 0 of 262
            Pseudo Genes (frameshifted)       :: 167 of 262
            Pseudo Genes (incomplete)         :: 107 of 262
            Pseudo Genes (internal stop)      :: 22 of 262
            Pseudo Genes (multiple problems)  :: 31 of 262
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5990224
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1059"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXEU010000001-JBIXEU010000008
WGS_SCAFLD  NZ_JBIXEU010000001-NZ_JBIXEU010000008
//
LOCUS       NZ_JBJJSY010000000   5788609 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain Sy163503, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJJSY000000000
VERSION     NZ_JBJJSY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44729018
            Assembly: GCF_045504415.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5788609)
  AUTHORS   Wang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) Laboratory medicine department, The Third
            People's Hospital of Shenzhen, 29 Bulan Road, Shenzhen, Guangdong
            518000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJJSY000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJJSY000000000.  This version of the
            project (01) has the accession number NZ_JBJJSY010000000, and
            consists of sequences JBJJSY010000001-JBJJSY010000182.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045504415.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:20:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,917
            CDSs (total)                      :: 5,796
            Genes (coding)                    :: 5,590
            CDSs (with protein)               :: 5,590
            Genes (RNA)                       :: 121
            rRNAs                             :: 11, 10, 11 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 9, 10, 11 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 206
            CDSs (without protein)            :: 206
            Pseudo Genes (ambiguous residues) :: 0 of 206
            Pseudo Genes (frameshifted)       :: 65 of 206
            Pseudo Genes (incomplete)         :: 145 of 206
            Pseudo Genes (internal stop)      :: 24 of 206
            Pseudo Genes (multiple problems)  :: 25 of 206
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5788609
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="Sy163503"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China: Shenzhen"
                     /collection_date="2023-11-13"
WGS         JBJJSY010000001-JBJJSY010000182
WGS_SCAFLD  NZ_JBJJSY010000001-NZ_JBJJSY010000182
//
LOCUS       NZ_JBJJST010000000   5762877 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain Sy161483, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJJST000000000
VERSION     NZ_JBJJST000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44729013
            Assembly: GCF_045504385.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5762877)
  AUTHORS   Wang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) Laboratory medicine department, The Third
            People's Hospital of Shenzhen, 29 Bulan Road, Shenzhen, Guangdong
            518000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJJST000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJJST000000000.  This version of the
            project (01) has the accession number NZ_JBJJST010000000, and
            consists of sequences JBJJST010000001-JBJJST010000179.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045504385.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:13:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,888
            CDSs (total)                      :: 5,769
            Genes (coding)                    :: 5,563
            CDSs (with protein)               :: 5,563
            Genes (RNA)                       :: 119
            rRNAs                             :: 9, 9, 10 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 7, 9, 10 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 206
            CDSs (without protein)            :: 206
            Pseudo Genes (ambiguous residues) :: 0 of 206
            Pseudo Genes (frameshifted)       :: 65 of 206
            Pseudo Genes (incomplete)         :: 145 of 206
            Pseudo Genes (internal stop)      :: 24 of 206
            Pseudo Genes (multiple problems)  :: 25 of 206
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5762877
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="Sy161483"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China: Shenzhen"
                     /collection_date="2023-09-24"
WGS         JBJJST010000001-JBJJST010000179
WGS_SCAFLD  NZ_JBJJST010000001-NZ_JBJJST010000179
//
LOCUS       NZ_JBIXFM010000000   5654214 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1040, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXFM000000000
VERSION     NZ_JBIXFM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247211
            Assembly: GCF_045621745.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5654214)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXFM000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXFM000000000.  This version of the
            project (01) has the accession number NZ_JBIXFM010000000, and
            consists of sequences JBIXFM010000001-JBIXFM010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 300x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045621745.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:30:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,554
            CDSs (total)                      :: 5,432
            Genes (coding)                    :: 5,301
            CDSs (with protein)               :: 5,301
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 131
            CDSs (without protein)            :: 131
            Pseudo Genes (ambiguous residues) :: 0 of 131
            Pseudo Genes (frameshifted)       :: 76 of 131
            Pseudo Genes (incomplete)         :: 60 of 131
            Pseudo Genes (internal stop)      :: 17 of 131
            Pseudo Genes (multiple problems)  :: 18 of 131
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5654214
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1040"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXFM010000001-JBIXFM010000005
WGS_SCAFLD  NZ_JBIXFM010000001-NZ_JBIXFM010000005
//
LOCUS       NZ_JBIXFQ010000000   5379730 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1035, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXFQ000000000
VERSION     NZ_JBIXFQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247207
            Assembly: GCF_045621845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5379730)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXFQ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXFQ000000000.  This version of the
            project (01) has the accession number NZ_JBIXFQ010000000, and
            consists of sequences JBIXFQ010000001-JBIXFQ010000003.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 788x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045621845.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:53:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,271
            CDSs (total)                      :: 5,149
            Genes (coding)                    :: 5,031
            CDSs (with protein)               :: 5,031
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 69 of 118
            Pseudo Genes (incomplete)         :: 55 of 118
            Pseudo Genes (internal stop)      :: 15 of 118
            Pseudo Genes (multiple problems)  :: 18 of 118
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5379730
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1035"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXFQ010000001-JBIXFQ010000003
WGS_SCAFLD  NZ_JBIXFQ010000001-NZ_JBIXFQ010000003
//
LOCUS       NZ_JBJKEJ010000000   5633566 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 34, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKEJ000000000
VERSION     NZ_JBJKEJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44631460
            Assembly: GCF_045505205.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5633566)
  AUTHORS   Dixon,B.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-NOV-2024) Division of Immunology, Immunity to
            Infection and Respiratory Medicine, University of Manchester,
            Princess Street, Manchester m17DN, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKEJ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJKEJ000000000.  This version of the
            project (01) has the accession number NZ_JBJKEJ010000000, and
            consists of sequences JBJKEJ010000001-JBJKEJ010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 60x
            Sequencing Technology  :: Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045505205.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:32:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,590
            CDSs (total)                      :: 5,467
            Genes (coding)                    :: 5,364
            CDSs (with protein)               :: 5,364
            Genes (RNA)                       :: 123
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 103
            CDSs (without protein)            :: 103
            Pseudo Genes (ambiguous residues) :: 0 of 103
            Pseudo Genes (frameshifted)       :: 47 of 103
            Pseudo Genes (incomplete)         :: 57 of 103
            Pseudo Genes (internal stop)      :: 12 of 103
            Pseudo Genes (multiple problems)  :: 12 of 103
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5633566
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="34"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /genotype="ST353"
WGS         JBJKEJ010000001-JBJKEJ010000004
WGS_SCAFLD  NZ_JBJKEJ010000001-NZ_JBJKEJ010000004
//
LOCUS       NZ_JBRWOV010000000   5623498 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain PEKP2001, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWOV000000000
VERSION     NZ_JBRWOV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385072
            Assembly: GCF_056162585.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5623498)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5623498)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWOV000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWOV000000000.  This version of the
            project (01) has the accession number NZ_JBRWOV010000000, and
            consists of sequences JBRWOV010000001-JBRWOV010000075.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162585.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:08:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,508
            CDSs (total)                      :: 5,430
            Genes (coding)                    :: 5,276
            CDSs (with protein)               :: 5,276
            Genes (RNA)                       :: 78
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 1 (16S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 154
            CDSs (without protein)            :: 154
            Pseudo Genes (ambiguous residues) :: 0 of 154
            Pseudo Genes (frameshifted)       :: 58 of 154
            Pseudo Genes (incomplete)         :: 96 of 154
            Pseudo Genes (internal stop)      :: 22 of 154
            Pseudo Genes (multiple problems)  :: 18 of 154
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5623498
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="PEKP2001"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982726 N 116.360012 E"
                     /collection_date="2021-02-01"
                     /collected_by="Ping Yang"
                     /genotype="ST15"
WGS         JBRWOV010000001-JBRWOV010000075
WGS_SCAFLD  NZ_JBRWOV010000001-NZ_JBRWOV010000075
//
LOCUS       NZ_JBJKEM010000000   5961092 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 31, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKEM000000000
VERSION     NZ_JBJKEM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44631457
            Assembly: GCF_045505255.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5961092)
  AUTHORS   Dixon,B.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-NOV-2024) Division of Immunology, Immunity to
            Infection and Respiratory Medicine, University of Manchester,
            Princess Street, Manchester m17DN, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKEM000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJKEM000000000.  This version of the
            project (01) has the accession number NZ_JBJKEM010000000, and
            consists of sequences JBJKEM010000001-JBJKEM010000006.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 55x
            Sequencing Technology  :: Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045505255.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:28:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,882
            CDSs (total)                      :: 5,759
            Genes (coding)                    :: 5,580
            CDSs (with protein)               :: 5,580
            Genes (RNA)                       :: 123
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 179
            CDSs (without protein)            :: 179
            Pseudo Genes (ambiguous residues) :: 0 of 179
            Pseudo Genes (frameshifted)       :: 68 of 179
            Pseudo Genes (incomplete)         :: 115 of 179
            Pseudo Genes (internal stop)      :: 21 of 179
            Pseudo Genes (multiple problems)  :: 22 of 179
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5961092
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="31"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /genotype="ST14"
WGS         JBJKEM010000001-JBJKEM010000006
WGS_SCAFLD  NZ_JBJKEM010000001-NZ_JBJKEM010000006
//
LOCUS       NZ_JBIGMB010000000   5534588 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E339, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGMB000000000
VERSION     NZ_JBIGMB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130664
            Assembly: GCF_045571815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5534588)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGMB000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGMB000000000.  This version of the
            project (01) has the accession number NZ_JBIGMB010000000, and
            consists of sequences JBIGMB010000001-JBIGMB010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 148x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045571815.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:33:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,509
            CDSs (total)                      :: 5,381
            Genes (coding)                    :: 5,170
            CDSs (with protein)               :: 5,170
            Genes (RNA)                       :: 128
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 17
            Pseudo Genes (total)              :: 211
            CDSs (without protein)            :: 211
            Pseudo Genes (ambiguous residues) :: 0 of 211
            Pseudo Genes (frameshifted)       :: 116 of 211
            Pseudo Genes (incomplete)         :: 96 of 211
            Pseudo Genes (internal stop)      :: 27 of 211
            Pseudo Genes (multiple problems)  :: 25 of 211
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5534588
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E339"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGMB010000001-JBIGMB010000006
WGS_SCAFLD  NZ_JBIGMB010000001-NZ_JBIGMB010000006
//
LOCUS       NZ_JBJJSZ010000000   5701983 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain Sy164427, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJJSZ000000000
VERSION     NZ_JBJJSZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44729019
            Assembly: GCF_045504245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5701983)
  AUTHORS   Wang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) Laboratory medicine department, The Third
            People's Hospital of Shenzhen, 29 Bulan Road, Shenzhen, Guangdong
            518000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJJSZ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJJSZ000000000.  This version of the
            project (01) has the accession number NZ_JBJJSZ010000000, and
            consists of sequences JBJJSZ010000001-JBJJSZ010000174.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045504245.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:19:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,816
            CDSs (total)                      :: 5,695
            Genes (coding)                    :: 5,495
            CDSs (with protein)               :: 5,495
            Genes (RNA)                       :: 121
            rRNAs                             :: 9, 10, 11 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 7, 10, 11 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 200
            CDSs (without protein)            :: 200
            Pseudo Genes (ambiguous residues) :: 0 of 200
            Pseudo Genes (frameshifted)       :: 64 of 200
            Pseudo Genes (incomplete)         :: 141 of 200
            Pseudo Genes (internal stop)      :: 24 of 200
            Pseudo Genes (multiple problems)  :: 26 of 200
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5701983
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="Sy164427"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China: Shenzhen"
                     /collection_date="2023-11-20"
WGS         JBJJSZ010000001-JBJJSZ010000174
WGS_SCAFLD  NZ_JBJJSZ010000001-NZ_JBJJSZ010000174
//
LOCUS       NZ_JBRWOQ010000000   5594134 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain PEKP5033, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWOQ000000000
VERSION     NZ_JBRWOQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385077
            Assembly: GCF_056162505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5594134)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5594134)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWOQ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWOQ000000000.  This version of the
            project (01) has the accession number NZ_JBRWOQ010000000, and
            consists of sequences JBRWOQ010000001-JBRWOQ010000104.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162505.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:10:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,584
            CDSs (total)                      :: 5,510
            Genes (coding)                    :: 5,379
            CDSs (with protein)               :: 5,379
            Genes (RNA)                       :: 74
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 131
            CDSs (without protein)            :: 131
            Pseudo Genes (ambiguous residues) :: 0 of 131
            Pseudo Genes (frameshifted)       :: 49 of 131
            Pseudo Genes (incomplete)         :: 87 of 131
            Pseudo Genes (internal stop)      :: 16 of 131
            Pseudo Genes (multiple problems)  :: 17 of 131
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5594134
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="PEKP5033"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982731 N 116.360012 E"
                     /collection_date="2021-04-05"
                     /collected_by="Ping Yang"
                     /genotype="ST11"
WGS         JBRWOQ010000001-JBRWOQ010000104
WGS_SCAFLD  NZ_JBRWOQ010000001-NZ_JBRWOQ010000104
//
LOCUS       NZ_JBJKEQ010000000   5818486 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 9, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKEQ000000000
VERSION     NZ_JBJKEQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44631453
            Assembly: GCF_045505355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5818486)
  AUTHORS   Dixon,B.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-NOV-2024) Division of Immunology, Immunity to
            Infection and Respiratory Medicine, University of Manchester,
            Princess Street, Manchester m17DN, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKEQ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJKEQ000000000.  This version of the
            project (01) has the accession number NZ_JBJKEQ010000000, and
            consists of sequences JBJKEQ010000001-JBJKEQ010000005.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 209x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045505355.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:29:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,876
            CDSs (total)                      :: 5,753
            Genes (coding)                    :: 5,625
            CDSs (with protein)               :: 5,625
            Genes (RNA)                       :: 123
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 57 of 128
            Pseudo Genes (incomplete)         :: 81 of 128
            Pseudo Genes (internal stop)      :: 11 of 128
            Pseudo Genes (multiple problems)  :: 18 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5818486
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="9"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /collection_date="2008-02"
                     /genotype="ST258"
WGS         JBJKEQ010000001-JBJKEQ010000005
WGS_SCAFLD  NZ_JBJKEQ010000001-NZ_JBJKEQ010000005
//
LOCUS       NZ_JBRWOS010000000   5506875 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain G7, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBRWOS000000000
VERSION     NZ_JBRWOS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385075
            Assembly: GCF_056162525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5506875)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5506875)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWOS000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWOS000000000.  This version of the
            project (01) has the accession number NZ_JBRWOS010000000, and
            consists of sequences JBRWOS010000001-JBRWOS010000053.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162525.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:12:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,397
            CDSs (total)                      :: 5,316
            Genes (coding)                    :: 5,202
            CDSs (with protein)               :: 5,202
            Genes (RNA)                       :: 81
            rRNAs                             :: 2, 3 (5S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 65
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 114
            CDSs (without protein)            :: 114
            Pseudo Genes (ambiguous residues) :: 0 of 114
            Pseudo Genes (frameshifted)       :: 53 of 114
            Pseudo Genes (incomplete)         :: 61 of 114
            Pseudo Genes (internal stop)      :: 16 of 114
            Pseudo Genes (multiple problems)  :: 14 of 114
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5506875
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="G7"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982729 N 116.360012 E"
                     /collection_date="2021-02-10"
                     /collected_by="Ping Yang"
                     /genotype="ST307"
WGS         JBRWOS010000001-JBRWOS010000053
WGS_SCAFLD  NZ_JBRWOS010000001-NZ_JBRWOS010000053
//
LOCUS       NZ_JBRWOT010000000   5136629 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain PEKP3096, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWOT000000000
VERSION     NZ_JBRWOT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385074
            Assembly: GCF_056162545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5136629)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5136629)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWOT000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWOT000000000.  This version of the
            project (01) has the accession number NZ_JBRWOT010000000, and
            consists of sequences JBRWOT010000001-JBRWOT010000040.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162545.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:13:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,987
            CDSs (total)                      :: 4,919
            Genes (coding)                    :: 4,837
            CDSs (with protein)               :: 4,837
            Genes (RNA)                       :: 68
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 56
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 39 of 82
            Pseudo Genes (incomplete)         :: 34 of 82
            Pseudo Genes (internal stop)      :: 20 of 82
            Pseudo Genes (multiple problems)  :: 8 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5136629
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="PEKP3096"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982728 N 116.360012 E"
                     /collection_date="2021-01-02"
                     /collected_by="Ping Yang"
                     /genotype="ST86-1LV"
WGS         JBRWOT010000001-JBRWOT010000040
WGS_SCAFLD  NZ_JBRWOT010000001-NZ_JBRWOT010000040
//
LOCUS       NZ_JBRWOU010000000   5725967 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain PEKP2003, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWOU000000000
VERSION     NZ_JBRWOU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385073
            Assembly: GCF_056162565.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5725967)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5725967)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWOU000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWOU000000000.  This version of the
            project (01) has the accession number NZ_JBRWOU010000000, and
            consists of sequences JBRWOU010000001-JBRWOU010000136.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162565.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:17:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,819
            CDSs (total)                      :: 5,739
            Genes (coding)                    :: 5,564
            CDSs (with protein)               :: 5,564
            Genes (RNA)                       :: 80
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 175
            CDSs (without protein)            :: 175
            Pseudo Genes (ambiguous residues) :: 0 of 175
            Pseudo Genes (frameshifted)       :: 56 of 175
            Pseudo Genes (incomplete)         :: 123 of 175
            Pseudo Genes (internal stop)      :: 24 of 175
            Pseudo Genes (multiple problems)  :: 23 of 175
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5725967
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="PEKP2003"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982727 N 116.360012 E"
                     /collection_date="2021-02-23"
                     /collected_by="Ping Yang"
                     /genotype="ST11"
WGS         JBRWOU010000001-JBRWOU010000136
WGS_SCAFLD  NZ_JBRWOU010000001-NZ_JBRWOU010000136
//
LOCUS       NZ_JBRWOR010000000   5749307 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain D1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBRWOR000000000
VERSION     NZ_JBRWOR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385076
            Assembly: GCF_056162485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5749307)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5749307)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWOR000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWOR000000000.  This version of the
            project (01) has the accession number NZ_JBRWOR010000000, and
            consists of sequences JBRWOR010000001-JBRWOR010000099.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162485.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:21:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,818
            CDSs (total)                      :: 5,743
            Genes (coding)                    :: 5,597
            CDSs (with protein)               :: 5,597
            Genes (RNA)                       :: 75
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 146
            CDSs (without protein)            :: 146
            Pseudo Genes (ambiguous residues) :: 0 of 146
            Pseudo Genes (frameshifted)       :: 59 of 146
            Pseudo Genes (incomplete)         :: 96 of 146
            Pseudo Genes (internal stop)      :: 23 of 146
            Pseudo Genes (multiple problems)  :: 29 of 146
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5749307
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="D1"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982730 N 116.360012 E"
                     /collection_date="2021-01-26"
                     /collected_by="Ping Yang"
                     /genotype="ST11"
WGS         JBRWOR010000001-JBRWOR010000099
WGS_SCAFLD  NZ_JBRWOR010000001-NZ_JBRWOR010000099
//
LOCUS       NZ_JAECUT010000000   5607024 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain ONE248, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAECUT000000000
VERSION     NZ_JAECUT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17023247
            Assembly: GCF_056172155.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5607024)
  AUTHORS   Sincero,T., Cardoso,B., Esposito,F., Fontana,H., Cardenas,A.,
            Fuga,B. and Lincopan,N.
  TITLE     Draft genome of NDM-1-producing Klebsiella pneumoniae recovered
            from a human bloodstream infection sample in Brazil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5607024)
  AUTHORS   Sincero,T., Cardoso,B., Esposito,F., Fontana,H., Cardenas,A.,
            Fuga,B. and Lincopan,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-DEC-2020) Microbiology, University of Sao Paulo,
            Lineu Prestes Avenue, Sao Paulo, Sao Paulo 05508-900, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAECUT000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JAECUT000000000.  This version of the
            project (01) has the accession number NZ_JAECUT010000000, and
            consists of sequences JAECUT010000001-JAECUT010000086.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Uniciclyer v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 184.0x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172155.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:07:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,598
            CDSs (total)                      :: 5,543
            Genes (coding)                    :: 5,431
            CDSs (with protein)               :: 5,431
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 46
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 112
            CDSs (without protein)            :: 112
            Pseudo Genes (ambiguous residues) :: 0 of 112
            Pseudo Genes (frameshifted)       :: 39 of 112
            Pseudo Genes (incomplete)         :: 73 of 112
            Pseudo Genes (internal stop)      :: 15 of 112
            Pseudo Genes (multiple problems)  :: 12 of 112
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5607024
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="ONE248"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Brazil: Santa Catarina"
                     /lat_lon="27.5969 S 48.5495 W"
                     /collection_date="2019"
                     /collected_by="Thais Sincero"
WGS         JAECUT010000001-JAECUT010000086
WGS_SCAFLD  NZ_JAECUT010000001-NZ_JAECUT010000086
//
LOCUS       NZ_JAECVH010000000   5576662 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain ONE273, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAECVH000000000
VERSION     NZ_JAECVH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17023634
            Assembly: GCF_056172395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5576662)
  AUTHORS   Garcia,D., Moura,Q., Fernandes,M., Esposito,F. and Lincopan,N.
  TITLE     Draft genome of KPC-2-producing Klebsiella pneumoniae recovered
            from a human bloodstream infection sample in Brazil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5576662)
  AUTHORS   Garcia,D., Moura,Q., Fernandes,M., Esposito,F. and Lincopan,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-DEC-2020) Microbiology, University of Sao Paulo,
            Lineu Prestes Avenue, Sao Paulo, Sao Paulo 05508-900, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAECVH000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JAECVH000000000.  This version of the
            project (01) has the accession number NZ_JAECVH010000000, and
            consists of sequences JAECVH010000001-JAECVH010000629.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Uniciclyer v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 186.0x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172395.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:07:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,913
            CDSs (total)                      :: 5,830
            Genes (coding)                    :: 5,461
            CDSs (with protein)               :: 5,461
            Genes (RNA)                       :: 83
            rRNAs                             :: 6, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 16S)
            partial rRNAs                     :: 2, 1, 4 (5S, 16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 369
            CDSs (without protein)            :: 369
            Pseudo Genes (ambiguous residues) :: 0 of 369
            Pseudo Genes (frameshifted)       :: 48 of 369
            Pseudo Genes (incomplete)         :: 296 of 369
            Pseudo Genes (internal stop)      :: 60 of 369
            Pseudo Genes (multiple problems)  :: 34 of 369
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5576662
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="ONE273"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Brazil: Sao Paulo"
                     /lat_lon="23.6666 S 46.5322 W"
                     /collection_date="2011"
                     /collected_by="Doroti Garcia"
WGS         JAECVH010000001-JAECVH010000629
WGS_SCAFLD  NZ_JAECVH010000001-NZ_JAECVH010000629
//
LOCUS       NZ_JAECVN010000000   5465997 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain ONE277, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAECVN000000000
VERSION     NZ_JAECVN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17024073
            Assembly: GCF_056172515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5465997)
  AUTHORS   Garcia,D., Moura,Q., Fernandes,M., Esposito,F. and Lincopan,N.
  TITLE     Draft genome of KPC-2-producing Klebsiella pneumoniae recovered
            from a human urinary tract infection sample in Brazil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5465997)
  AUTHORS   Garcia,D., Moura,Q., Fernandes,M., Esposito,F. and Lincopan,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-DEC-2020) Microbiology, University of Sao Paulo,
            Lineu Prestes Avenue, Sao Paulo, Sao Paulo 05508-900, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAECVN000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JAECVN000000000.  This version of the
            project (01) has the accession number NZ_JAECVN010000000, and
            consists of sequences JAECVN010000001-JAECVN010000370.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Uniciclyer v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 175.0x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172515.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:09:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,623
            CDSs (total)                      :: 5,544
            Genes (coding)                    :: 5,273
            CDSs (with protein)               :: 5,273
            Genes (RNA)                       :: 79
            rRNAs                             :: 7, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1 (5S, 16S)
            partial rRNAs                     :: 2, 1 (5S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 271
            CDSs (without protein)            :: 271
            Pseudo Genes (ambiguous residues) :: 0 of 271
            Pseudo Genes (frameshifted)       :: 51 of 271
            Pseudo Genes (incomplete)         :: 204 of 271
            Pseudo Genes (internal stop)      :: 49 of 271
            Pseudo Genes (multiple problems)  :: 29 of 271
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5465997
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="ONE277"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Brazil: Sao Paulo"
                     /lat_lon="21.1767 S 47.8208 W"
                     /collection_date="2011"
                     /collected_by="Doroti Garcia"
WGS         JAECVN010000001-JAECVN010000370
WGS_SCAFLD  NZ_JAECVN010000001-NZ_JAECVN010000370
//
LOCUS       NZ_JAECVI010000000   5528242 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain ONE278, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAECVI000000000
VERSION     NZ_JAECVI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17023635
            Assembly: GCF_056172415.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5528242)
  AUTHORS   Garcia,D., Fernandes,M., Moura,Q., Esposito,F. and Lincopan,N.
  TITLE     Draft genome of KPC-2-producing Klebsiella pneumoniae recovered
            from a human bloodstream infection sample in Brazil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5528242)
  AUTHORS   Garcia,D., Fernandes,M., Moura,Q., Esposito,F. and Lincopan,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-DEC-2020) Microbiology, University of Sao Paulo,
            Lineu Prestes Avenue, Sao Paulo, Sao Paulo 05508-900, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAECVI000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JAECVI000000000.  This version of the
            project (01) has the accession number NZ_JAECVI010000000, and
            consists of sequences JAECVI010000001-JAECVI010000297.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Uniciclyer v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200.0x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172415.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:52:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,610
            CDSs (total)                      :: 5,541
            Genes (coding)                    :: 5,327
            CDSs (with protein)               :: 5,327
            Genes (RNA)                       :: 69
            rRNAs                             :: 5, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 16S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 214
            CDSs (without protein)            :: 214
            Pseudo Genes (ambiguous residues) :: 0 of 214
            Pseudo Genes (frameshifted)       :: 61 of 214
            Pseudo Genes (incomplete)         :: 153 of 214
            Pseudo Genes (internal stop)      :: 30 of 214
            Pseudo Genes (multiple problems)  :: 29 of 214
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5528242
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="ONE278"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Brazil: Sao Paulo"
                     /lat_lon="23.6666 S 46.5322 W"
                     /collection_date="2011"
                     /collected_by="Doroti Garcia"
WGS         JAECVI010000001-JAECVI010000297
WGS_SCAFLD  NZ_JAECVI010000001-NZ_JAECVI010000297
//
LOCUS       NZ_JBJLMJ010000000   5579189 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 896049, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLMJ000000000
VERSION     NZ_JBJLMJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061667
            Assembly: GCF_045566555.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5579189)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5579189)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLMJ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLMJ000000000.  This version of the
            project (01) has the accession number NZ_JBJLMJ010000000, and
            consists of sequences JBJLMJ010000001-JBJLMJ010000110.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.72
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045566555.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:18:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,478
            CDSs (total)                      :: 5,425
            Genes (coding)                    :: 5,288
            CDSs (with protein)               :: 5,288
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 38
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 137
            CDSs (without protein)            :: 137
            Pseudo Genes (ambiguous residues) :: 0 of 137
            Pseudo Genes (frameshifted)       :: 55 of 137
            Pseudo Genes (incomplete)         :: 79 of 137
            Pseudo Genes (internal stop)      :: 24 of 137
            Pseudo Genes (multiple problems)  :: 17 of 137
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5579189
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="896049"
                     /isolation_source="RECTAL SWAB"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-03-14"
                     /collected_by="HUMS"
WGS         JBJLMJ010000001-JBJLMJ010000110
WGS_SCAFLD  NZ_JBJLMJ010000001-NZ_JBJLMJ010000110
//
LOCUS       NZ_JAECVD010000000   5599679 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain ONE276, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAECVD000000000
VERSION     NZ_JAECVD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17023580
            Assembly: GCF_056172315.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5599679)
  AUTHORS   Garcia,D., Moura,Q., Fernandes,M., Fuga,B., Esposito,F., Cardoso,B.
            and Lincopan,N.
  TITLE     Draft genome of KPC-2-producing Klebsiella pneumoniae recovered
            from human infection in Brazil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5599679)
  AUTHORS   Garcia,D., Moura,Q., Fernandes,M., Fuga,B., Esposito,F., Cardoso,B.
            and Lincopan,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-DEC-2020) Microbiology, University of Sao Paulo,
            Lineu Prestes Avenue, Sao Paulo, Sao Paulo 05508-900, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAECVD000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JAECVD000000000.  This version of the
            project (01) has the accession number NZ_JAECVD010000000, and
            consists of sequences JAECVD010000001-JAECVD010000298.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Uniciclyer v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 211.0x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172315.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:59:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,754
            CDSs (total)                      :: 5,671
            Genes (coding)                    :: 5,473
            CDSs (with protein)               :: 5,473
            Genes (RNA)                       :: 83
            rRNAs                             :: 4, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 65
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 55 of 198
            Pseudo Genes (incomplete)         :: 135 of 198
            Pseudo Genes (internal stop)      :: 37 of 198
            Pseudo Genes (multiple problems)  :: 26 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5599679
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="ONE276"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Brazil: Sao Paulo"
                     /lat_lon="21.1767 S 47.8208 W"
                     /collection_date="2011"
                     /collected_by="Doroti Garcia"
WGS         JAECVD010000001-JAECVD010000298
WGS_SCAFLD  NZ_JAECVD010000001-NZ_JAECVD010000298
//
LOCUS       NZ_JAECUZ010000000   5785947 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain ONE283, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAECUZ000000000
VERSION     NZ_JAECUZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17023524
            Assembly: GCF_056172275.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5785947)
  AUTHORS   Garcia,D., Moura,Q., Fernandes,M., Fuga,B., Esposito,F. and
            Lincopan,N.
  TITLE     Draft genome of KPC-2-producing Klebsiella pneumoniae recovered
            from water sample in Brazil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5785947)
  AUTHORS   Garcia,D., Moura,Q., Fernandes,M., Fuga,B., Esposito,F. and
            Lincopan,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-DEC-2020) Microbiology, University of Sao Paulo,
            Lineu Prestes Avenue, Sao Paulo, Sao Paulo 05508-900, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAECUZ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JAECUZ000000000.  This version of the
            project (01) has the accession number NZ_JAECUZ010000000, and
            consists of sequences JAECUZ010000001-JAECUZ010000503.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Uniciclyer v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 239.0x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172275.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:10:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,080
            CDSs (total)                      :: 6,017
            Genes (coding)                    :: 5,766
            CDSs (with protein)               :: 5,766
            Genes (RNA)                       :: 63
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 48
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 251
            CDSs (without protein)            :: 251
            Pseudo Genes (ambiguous residues) :: 0 of 251
            Pseudo Genes (frameshifted)       :: 48 of 251
            Pseudo Genes (incomplete)         :: 197 of 251
            Pseudo Genes (internal stop)      :: 17 of 251
            Pseudo Genes (multiple problems)  :: 10 of 251
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5785947
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="ONE283"
                     /isolation_source="Water sample"
                     /db_xref="taxon:573"
                     /geo_loc_name="Brazil: Sao Paulo"
                     /lat_lon="23.5874 S 46.6590 W"
                     /collection_date="2013"
                     /collected_by="Doroti Garcia"
WGS         JAECUZ010000001-JAECUZ010000503
WGS_SCAFLD  NZ_JAECUZ010000001-NZ_JAECUZ010000503
//
LOCUS       NZ_CAXOAV010000000   5536076 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain FFZB-170 isolate FFZB_170, whole
            genome shotgun sequencing project.
ACCESSION   NZ_CAXOAV000000000
VERSION     NZ_CAXOAV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA115874814
            Sequence Read Archive: ERR13421016
            Assembly: GCF_964207145.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5536076)
  AUTHORS   Kumburu,H.H., Sonda,T.B. and van Zwetselaar,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-JUL-2024) Kilimanjaro Clinical Research Institute,
            Moshi, Kilimanjaro, Tanzania
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAXOAV000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_CAXOAV000000000.  This version of the
            project (01) has the accession number NZ_CAXOAV010000000, and
            consists of sequences CAXOAV010000001-CAXOAV010000131.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964207145.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:09:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,442
            CDSs (total)                      :: 5,361
            Genes (coding)                    :: 5,225
            CDSs (with protein)               :: 5,225
            Genes (RNA)                       :: 81
            rRNAs                             :: 1, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 4 (16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 136
            CDSs (without protein)            :: 136
            Pseudo Genes (ambiguous residues) :: 0 of 136
            Pseudo Genes (frameshifted)       :: 54 of 136
            Pseudo Genes (incomplete)         :: 91 of 136
            Pseudo Genes (internal stop)      :: 13 of 136
            Pseudo Genes (multiple problems)  :: 18 of 136
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5536076
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="FFZB-170"
                     /isolate="FFZB_170"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Tanzania"
                     /collection_date="2021"
                     /collected_by="Mnazi Mmoja Referral Hospital of Zanzibar"
WGS         CAXOAV010000001-CAXOAV010000131
WGS_SCAFLD  NZ_CAXOAV010000001-NZ_CAXOAV010000131
//
LOCUS       NZ_JBJLLT010000000   5664698 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 964556, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLLT000000000
VERSION     NZ_JBJLLT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061683
            Assembly: GCF_045566775.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5664698)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5664698)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLLT000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLLT000000000.  This version of the
            project (01) has the accession number NZ_JBJLLT010000000, and
            consists of sequences JBJLLT010000001-JBJLLT010000116.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.88
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045566775.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:36:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,649
            CDSs (total)                      :: 5,562
            Genes (coding)                    :: 5,417
            CDSs (with protein)               :: 5,417
            Genes (RNA)                       :: 87
            rRNAs                             :: 1, 4, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 4, 3 (16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 51 of 145
            Pseudo Genes (incomplete)         :: 94 of 145
            Pseudo Genes (internal stop)      :: 22 of 145
            Pseudo Genes (multiple problems)  :: 18 of 145
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5664698
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="964556"
                     /isolation_source="RECTAL SWAB"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-06-23"
                     /collected_by="HUMS"
WGS         JBJLLT010000001-JBJLLT010000116
WGS_SCAFLD  NZ_JBJLLT010000001-NZ_JBJLLT010000116
//
LOCUS       NZ_JBFYDH010000000   5426250 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain KPNCDS16, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBFYDH000000000
VERSION     NZ_JBFYDH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN42934511
            Assembly: GCF_041061325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5426250)
  AUTHORS   Ramani,V.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JUL-2024) Dairy Microbiology, College of Dairy
            Science, Kamdhenu University, Amreli, Amreli-Rajkot Highway, Near
            Shedubhar Village, Amreli, Gujarat 365601, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBFYDH000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBFYDH000000000.  This version of the
            project (01) has the accession number NZ_JBFYDH010000000, and
            consists of sequences JBFYDH010000001-JBFYDH010000028.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 186.0x
            Sequencing Technology  :: Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_041061325.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:56:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,343
            CDSs (total)                      :: 5,247
            Genes (coding)                    :: 5,143
            CDSs (with protein)               :: 5,143
            Genes (RNA)                       :: 96
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 3 (16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 104
            CDSs (without protein)            :: 104
            Pseudo Genes (ambiguous residues) :: 0 of 104
            Pseudo Genes (frameshifted)       :: 52 of 104
            Pseudo Genes (incomplete)         :: 50 of 104
            Pseudo Genes (internal stop)      :: 22 of 104
            Pseudo Genes (multiple problems)  :: 16 of 104
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5426250
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="KPNCDS16"
                     /isolation_source="Raw Milk"
                     /db_xref="taxon:573"
                     /geo_loc_name="India: Gujarat"
                     /collection_date="2024-01-03"
                     /collected_by="College of Dairy Science, Kamdhenu
                     University, Amreli"
WGS         JBFYDH010000001-JBFYDH010000028
WGS_SCAFLD  NZ_JBFYDH010000001-NZ_JBFYDH010000028
//
LOCUS       NZ_JBIXEI010000000   5530321 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1074, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXEI000000000
VERSION     NZ_JBIXEI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247241
            Assembly: GCF_045621185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5530321)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXEI000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXEI000000000.  This version of the
            project (01) has the accession number NZ_JBIXEI010000000, and
            consists of sequences JBIXEI010000001-JBIXEI010000003.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 186x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045621185.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:47:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,426
            CDSs (total)                      :: 5,298
            Genes (coding)                    :: 5,131
            CDSs (with protein)               :: 5,131
            Genes (RNA)                       :: 128
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 18
            Pseudo Genes (total)              :: 167
            CDSs (without protein)            :: 167
            Pseudo Genes (ambiguous residues) :: 0 of 167
            Pseudo Genes (frameshifted)       :: 99 of 167
            Pseudo Genes (incomplete)         :: 67 of 167
            Pseudo Genes (internal stop)      :: 21 of 167
            Pseudo Genes (multiple problems)  :: 17 of 167
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5530321
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1074"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXEI010000001-JBIXEI010000003
WGS_SCAFLD  NZ_JBIXEI010000001-NZ_JBIXEI010000003
//
LOCUS       NZ_JBJLNC010000000   5474445 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 249231, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLNC000000000
VERSION     NZ_JBJLNC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061648
            Assembly: GCF_045570255.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5474445)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5474445)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLNC000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLNC000000000.  This version of the
            project (01) has the accession number NZ_JBJLNC010000000, and
            consists of sequences JBJLNC010000001-JBJLNC010000068.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.53
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045570255.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:27:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,372
            CDSs (total)                      :: 5,281
            Genes (coding)                    :: 5,156
            CDSs (with protein)               :: 5,156
            Genes (RNA)                       :: 91
            rRNAs                             :: 1, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 125
            CDSs (without protein)            :: 125
            Pseudo Genes (ambiguous residues) :: 0 of 125
            Pseudo Genes (frameshifted)       :: 68 of 125
            Pseudo Genes (incomplete)         :: 68 of 125
            Pseudo Genes (internal stop)      :: 17 of 125
            Pseudo Genes (multiple problems)  :: 24 of 125
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5474445
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="249231"
                     /isolation_source="RECTAL SWAB"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2021-07-08"
                     /collected_by="HUMS"
WGS         JBJLNC010000001-JBJLNC010000068
WGS_SCAFLD  NZ_JBJLNC010000001-NZ_JBJLNC010000068
//
LOCUS       NZ_JBJLNF010000000   5834280 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 1096799, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLNF000000000
VERSION     NZ_JBJLNF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061645
            Assembly: GCF_045570075.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5834280)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5834280)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLNF000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLNF000000000.  This version of the
            project (01) has the accession number NZ_JBJLNF010000000, and
            consists of sequences JBJLNF010000001-JBJLNF010000112.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.50
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045570075.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:18:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,848
            CDSs (total)                      :: 5,751
            Genes (coding)                    :: 5,607
            CDSs (with protein)               :: 5,607
            Genes (RNA)                       :: 97
            rRNAs                             :: 1, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 144
            CDSs (without protein)            :: 144
            Pseudo Genes (ambiguous residues) :: 0 of 144
            Pseudo Genes (frameshifted)       :: 60 of 144
            Pseudo Genes (incomplete)         :: 87 of 144
            Pseudo Genes (internal stop)      :: 27 of 144
            Pseudo Genes (multiple problems)  :: 23 of 144
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5834280
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="1096799"
                     /isolation_source="RECTAL SWAB"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2024-01-02"
                     /collected_by="HUMS"
WGS         JBJLNF010000001-JBJLNF010000112
WGS_SCAFLD  NZ_JBJLNF010000001-NZ_JBJLNF010000112
//
LOCUS       NZ_JBIXEY010000000   5695103 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1055, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXEY000000000
VERSION     NZ_JBIXEY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247225
            Assembly: GCF_045621485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5695103)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXEY000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXEY000000000.  This version of the
            project (01) has the accession number NZ_JBIXEY010000000, and
            consists of sequences JBIXEY010000001-JBIXEY010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 238x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045621485.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:48:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,675
            CDSs (total)                      :: 5,553
            Genes (coding)                    :: 5,344
            CDSs (with protein)               :: 5,344
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 209
            CDSs (without protein)            :: 209
            Pseudo Genes (ambiguous residues) :: 0 of 209
            Pseudo Genes (frameshifted)       :: 141 of 209
            Pseudo Genes (incomplete)         :: 80 of 209
            Pseudo Genes (internal stop)      :: 15 of 209
            Pseudo Genes (multiple problems)  :: 25 of 209
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5695103
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1055"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXEY010000001-JBIXEY010000009
WGS_SCAFLD  NZ_JBIXEY010000001-NZ_JBIXEY010000009
//
LOCUS       NZ_NICC01000000      5621882 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain AUH-KIMP170, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NICC00000000
VERSION     NZ_NICC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07173929
            Assembly: GCF_002866585.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5621882)
  AUTHORS   Tokajian,S. and Araj,G.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-JUN-2017) Natural Sciences, LAU, Lebanese American
            University, Byblos 36, Lebanon
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NICC00000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_NICC00000000.  This version of the project
            (01) has the accession number NZ_NICC01000000, and consists of
            sequences NICC01000001-NICC01000100.
            Bacteria and source DNA available from Dr. George Araj.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002866585.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:11:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,608
            CDSs (total)                      :: 5,483
            Genes (coding)                    :: 5,369
            CDSs (with protein)               :: 5,369
            Genes (RNA)                       :: 125
            rRNAs                             :: 10, 5, 11 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 1 (5S, 16S)
            partial rRNAs                     :: 1, 4, 11 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 114
            CDSs (without protein)            :: 114
            Pseudo Genes (ambiguous residues) :: 0 of 114
            Pseudo Genes (frameshifted)       :: 49 of 114
            Pseudo Genes (incomplete)         :: 70 of 114
            Pseudo Genes (internal stop)      :: 10 of 114
            Pseudo Genes (multiple problems)  :: 12 of 114
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5621882
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="AUH-KIMP170"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Lebanon"
                     /collection_date="2013-02-12"
WGS         NICC01000001-NICC01000100
WGS_SCAFLD  NZ_NICC01000001-NZ_NICC01000100
//
LOCUS       NZ_JBJLMH010000000   5737971 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 898434, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLMH000000000
VERSION     NZ_JBJLMH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061669
            Assembly: GCF_045566475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5737971)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5737971)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLMH000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLMH000000000.  This version of the
            project (01) has the accession number NZ_JBJLMH010000000, and
            consists of sequences JBJLMH010000001-JBJLMH010000147.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.74
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045566475.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:37:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,774
            CDSs (total)                      :: 5,715
            Genes (coding)                    :: 5,589
            CDSs (with protein)               :: 5,589
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 4, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 4, 3 (16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 126
            CDSs (without protein)            :: 126
            Pseudo Genes (ambiguous residues) :: 0 of 126
            Pseudo Genes (frameshifted)       :: 50 of 126
            Pseudo Genes (incomplete)         :: 84 of 126
            Pseudo Genes (internal stop)      :: 15 of 126
            Pseudo Genes (multiple problems)  :: 19 of 126
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5737971
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="898434"
                     /isolation_source="SURGICAL WOUND"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-03-17"
                     /collected_by="HUMS"
WGS         JBJLMH010000001-JBJLMH010000147
WGS_SCAFLD  NZ_JBJLMH010000001-NZ_JBJLMH010000147
//
LOCUS       NZ_JBIXFG010000000   5593823 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1046, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXFG000000000
VERSION     NZ_JBIXFG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247217
            Assembly: GCF_045621645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5593823)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXFG000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXFG000000000.  This version of the
            project (01) has the accession number NZ_JBIXFG010000000, and
            consists of sequences JBIXFG010000001-JBIXFG010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 321x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045621645.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:53:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,608
            CDSs (total)                      :: 5,483
            Genes (coding)                    :: 5,323
            CDSs (with protein)               :: 5,323
            Genes (RNA)                       :: 125
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 160
            CDSs (without protein)            :: 160
            Pseudo Genes (ambiguous residues) :: 0 of 160
            Pseudo Genes (frameshifted)       :: 94 of 160
            Pseudo Genes (incomplete)         :: 70 of 160
            Pseudo Genes (internal stop)      :: 20 of 160
            Pseudo Genes (multiple problems)  :: 22 of 160
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5593823
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1046"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXFG010000001-JBIXFG010000007
WGS_SCAFLD  NZ_JBIXFG010000001-NZ_JBIXFG010000007
//
LOCUS       NZ_JAAFDA010000000   5656426 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 6-75, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAAFDA000000000
VERSION     NZ_JAAFDA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13915716
            Assembly: GCF_016643175.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5656426)
  AUTHORS   Hernandez-Garcia,M., Garcia-Fernandez,S., Garcia-Castillo,M.,
            Melo-Cristino,J., Pinto,M.F., Goncalves,E., Alves,V., Costa,E.,
            Ramalheira,E., Sancho,L., Diogo,J., Ferreira,R., Silva,T.,
            Chaves,C., Passaro,L., Paixao,L., Romano,J. and Canton,R.
  CONSRTM   STEP study group
  TITLE     Confronting Ceftolozane-Tazobactam Susceptibility in
            Multidrug-Resistant Enterobacterales Isolates and Whole-Genome
            Sequencing Results (STEP Study)
  JOURNAL   Int J Antimicrob Agents 57 (2), 106259 (2021)
   PUBMED   33310115
REFERENCE   2  (bases 1 to 5656426)
  AUTHORS   Hernandez-Garcia,M., Canton,R., Passaro,L., Moura,C. and Romano,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-JAN-2020) Microbiology, Hospital Universitario Ramon
            y Cajal (IRYCIS), Carretera de Colmenar Viejo Km 9.1, Madrid,
            Madrid 28034, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAAFDA000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JAAFDA000000000.  This version of the
            project (01) has the accession number NZ_JAAFDA010000000, and
            consists of sequences JAAFDA010000001-JAAFDA010000149.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date             :: SEP-2019
            Assembly Method           :: SPAdes v. 3.11.1
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: GCF_000220485.1
            Genome Coverage           :: 120x
            Sequencing Technology     :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_016643175.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:34:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,614
            CDSs (total)                      :: 5,518
            Genes (coding)                    :: 5,366
            CDSs (with protein)               :: 5,366
            Genes (RNA)                       :: 96
            rRNAs                             :: 3, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 15
            Pseudo Genes (total)              :: 152
            CDSs (without protein)            :: 152
            Pseudo Genes (ambiguous residues) :: 0 of 152
            Pseudo Genes (frameshifted)       :: 52 of 152
            Pseudo Genes (incomplete)         :: 105 of 152
            Pseudo Genes (internal stop)      :: 19 of 152
            Pseudo Genes (multiple problems)  :: 20 of 152
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5656426
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="6-75"
                     /isolation_source="Low Respiratory Tract Infection"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Portugal: Porto"
                     /collected_by="CH Porto"
                     /genotype="ST35"
WGS         JAAFDA010000001-JAAFDA010000149
WGS_SCAFLD  NZ_JAAFDA010000001-NZ_JAAFDA010000149
//
LOCUS       NZ_JAECVF010000000   5307467 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain ONE263, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAECVF000000000
VERSION     NZ_JAECVF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17023632
            Assembly: GCF_056172355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5307467)
  AUTHORS   Cassettari,V., Santos,S., Fernandes,M., Moura,Q., Esposito,F. and
            Lincopan,N.
  TITLE     Draft genome of ESBL-producing Klebsiella pneumoniae recovered from
            a human bloodstream infection sample in Brazil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5307467)
  AUTHORS   Cassettari,V., Santos,S., Fernandes,M., Moura,Q., Esposito,F. and
            Lincopan,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-DEC-2020) Microbiology, University of Sao Paulo,
            Lineu Prestes Avenue, Sao Paulo, Sao Paulo 05508-900, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAECVF000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JAECVF000000000.  This version of the
            project (01) has the accession number NZ_JAECVF010000000, and
            consists of sequences JAECVF010000001-JAECVF010000076.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Uniciclyer v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 221.0x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172355.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:59:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,157
            CDSs (total)                      :: 5,103
            Genes (coding)                    :: 5,000
            CDSs (with protein)               :: 5,000
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 103
            CDSs (without protein)            :: 103
            Pseudo Genes (ambiguous residues) :: 0 of 103
            Pseudo Genes (frameshifted)       :: 46 of 103
            Pseudo Genes (incomplete)         :: 58 of 103
            Pseudo Genes (internal stop)      :: 12 of 103
            Pseudo Genes (multiple problems)  :: 12 of 103
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5307467
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="ONE263"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Brazil: Sao Paulo"
                     /lat_lon="23.563763 S 46.741412 W"
                     /collection_date="2012"
                     /collected_by="Silvia Santos"
WGS         JAECVF010000001-JAECVF010000076
WGS_SCAFLD  NZ_JAECVF010000001-NZ_JAECVF010000076
//
LOCUS       NZ_JARCXL010000000   5442737 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain MGL_88_B5, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JARCXL000000000
VERSION     NZ_JARCXL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32745650
            Assembly: GCF_036530435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5442737)
  AUTHORS   Das,B.
  TITLE     Heterogeneity in antimicrobial resistance traits among multidrug
            resitant Gram-negative bacterial pathogens isolated from India:
            phenotypic, genotypic and proteomic analyses
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5442737)
  AUTHORS   Das,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JAN-2023) Infection and Immunology, Translational
            Health Science and Technology Institute, Gurgaon-Faridabad
            expressway, Faridabad, Haryana 121001, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARCXL000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JARCXL000000000.  This version of the
            project (01) has the accession number NZ_JARCXL010000000, and
            consists of sequences JARCXL010000001-JARCXL010000160.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 16x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_036530435.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:48:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,358
            CDSs (total)                      :: 5,267
            Genes (coding)                    :: 5,113
            CDSs (with protein)               :: 5,113
            Genes (RNA)                       :: 91
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 80
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 154
            CDSs (without protein)            :: 154
            Pseudo Genes (ambiguous residues) :: 0 of 154
            Pseudo Genes (frameshifted)       :: 64 of 154
            Pseudo Genes (incomplete)         :: 95 of 154
            Pseudo Genes (internal stop)      :: 22 of 154
            Pseudo Genes (multiple problems)  :: 23 of 154
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5442737
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="MGL_88_B5"
                     /isolation_source="E.T Tube aspirate"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="India: Chattisgarh, Jan Swasthya Sahyog"
                     /lat_lon="21.27 N 81.86 E"
                     /collection_date="2020-06-11"
                     /collected_by="THSTI-Molecular Genetics Laboratory"
WGS         JARCXL010000001-JARCXL010000160
WGS_SCAFLD  NZ_JARCXL010000001-NZ_JARCXL010000160
//
LOCUS       NZ_JAEDYK010000000   5809732 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain ONE215, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAEDYK000000000
VERSION     NZ_JAEDYK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17036407
            Assembly: GCF_056172615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5809732)
  AUTHORS   Oliveira,S., Fuga,B., Moura,Q., Esposito,F. and Lincopan,N.
  TITLE     Draft genome of KPC-2-producing Klebsiella pneumoniae recovered
            from a human bloodstream infection sample in Brazil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5809732)
  AUTHORS   Oliveira,S., Fuga,B., Moura,Q., Esposito,F. and Lincopan,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-DEC-2020) Microbiology, University of Sao Paulo,
            Lineu Prestes Avenue, Sao Paulo, Sao Paulo 05508-900, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAEDYK000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JAEDYK000000000.  This version of the
            project (01) has the accession number NZ_JAEDYK010000000, and
            consists of sequences JAEDYK010000001-JAEDYK010000170.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 208.0x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172615.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:08:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,819
            CDSs (total)                      :: 5,766
            Genes (coding)                    :: 5,631
            CDSs (with protein)               :: 5,631
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 1 (16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 135
            CDSs (without protein)            :: 135
            Pseudo Genes (ambiguous residues) :: 0 of 135
            Pseudo Genes (frameshifted)       :: 47 of 135
            Pseudo Genes (incomplete)         :: 85 of 135
            Pseudo Genes (internal stop)      :: 19 of 135
            Pseudo Genes (multiple problems)  :: 14 of 135
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5809732
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="ONE215"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Brazil: Rio Grande do Sul"
                     /lat_lon="30.032778 S 51.230000 W"
                     /collection_date="2017"
                     /collected_by="Silvia D. de Oliveira"
WGS         JAEDYK010000001-JAEDYK010000170
WGS_SCAFLD  NZ_JAEDYK010000001-NZ_JAEDYK010000170
//
LOCUS       NZ_JBJLMW010000000   5510681 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 732311, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLMW000000000
VERSION     NZ_JBJLMW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061654
            Assembly: GCF_045570135.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5510681)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5510681)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLMW000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLMW000000000.  This version of the
            project (01) has the accession number NZ_JBJLMW010000000, and
            consists of sequences JBJLMW010000001-JBJLMW010000103.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.59
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045570135.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:24:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,528
            CDSs (total)                      :: 5,427
            Genes (coding)                    :: 5,312
            CDSs (with protein)               :: 5,312
            Genes (RNA)                       :: 101
            rRNAs                             :: 1, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 4, 4 (16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 115
            CDSs (without protein)            :: 115
            Pseudo Genes (ambiguous residues) :: 0 of 115
            Pseudo Genes (frameshifted)       :: 44 of 115
            Pseudo Genes (incomplete)         :: 65 of 115
            Pseudo Genes (internal stop)      :: 18 of 115
            Pseudo Genes (multiple problems)  :: 10 of 115
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5510681
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="732311"
                     /isolation_source="RECTAL SWAB"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2022-07-23"
                     /collected_by="HUMS"
WGS         JBJLMW010000001-JBJLMW010000103
WGS_SCAFLD  NZ_JBJLMW010000001-NZ_JBJLMW010000103
//
LOCUS       NZ_JAECUV010000000   5698187 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain ONE266, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAECUV000000000
VERSION     NZ_JAECUV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17023528
            Assembly: GCF_056172195.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5698187)
  AUTHORS   Cardoso,B., Esposito,F., Sato,M.I.Z., Brandao,C.J., Fuga,B.,
            Moura,Q., Fontana,H., Cerdeira,L. and Lincopan,N.
  TITLE     Draft genome of KPC-2-producing Klebsiella pneumoniae recovered
            from water sample in Brazil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5698187)
  AUTHORS   Cardoso,B., Esposito,F., Sato,M.I.Z., Brandao,C.J., Fuga,B.,
            Moura,Q., Fontana,H., Cerdeira,L. and Lincopan,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-DEC-2020) Microbiology, University of Sao Paulo,
            Lineu Prestes Avenue, Sao Paulo, Sao Paulo 05508-900, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAECUV000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JAECUV000000000.  This version of the
            project (01) has the accession number NZ_JAECUV010000000, and
            consists of sequences JAECUV010000001-JAECUV010000174.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Uniciclyer v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 177.4x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172195.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:06:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,772
            CDSs (total)                      :: 5,724
            Genes (coding)                    :: 5,560
            CDSs (with protein)               :: 5,560
            Genes (RNA)                       :: 48
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 164
            CDSs (without protein)            :: 164
            Pseudo Genes (ambiguous residues) :: 0 of 164
            Pseudo Genes (frameshifted)       :: 73 of 164
            Pseudo Genes (incomplete)         :: 94 of 164
            Pseudo Genes (internal stop)      :: 13 of 164
            Pseudo Genes (multiple problems)  :: 13 of 164
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5698187
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="ONE266"
                     /isolation_source="Water sample"
                     /db_xref="taxon:573"
                     /geo_loc_name="Brazil: Sao Paulo"
                     /lat_lon="23.525278 S 46.559167 W"
                     /collection_date="2016"
                     /collected_by="Maria Ines Zanoli Sato, Carlos Jesus
                     Brandao"
WGS         JAECUV010000001-JAECUV010000174
WGS_SCAFLD  NZ_JAECUV010000001-NZ_JAECUV010000174
//
LOCUS       NZ_JAECVJ010000000   5797412 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain ONE296, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAECVJ000000000
VERSION     NZ_JAECVJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17023638
            Assembly: GCF_056172435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5797412)
  AUTHORS   Esposito,F., Cardoso,B., Oliveira,F.A., Cerdeira,L., Levy,C.E. and
            Lincopan,N.
  TITLE     Draft genome of KPC-2-producing Klebsiella pneumoniae recovered
            from a human bloodstream infection sample in Brazil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5797412)
  AUTHORS   Esposito,F., Cardoso,B., Oliveira,F.A., Cerdeira,L., Levy,C.E. and
            Lincopan,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-DEC-2020) Microbiology, University of Sao Paulo,
            Lineu Prestes Avenue, Sao Paulo, Sao Paulo 05508-900, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAECVJ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JAECVJ000000000.  This version of the
            project (01) has the accession number NZ_JAECVJ010000000, and
            consists of sequences JAECVJ010000001-JAECVJ010000166.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Uniciclyer v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 206.0x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172435.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:02:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,893
            CDSs (total)                      :: 5,845
            Genes (coding)                    :: 5,719
            CDSs (with protein)               :: 5,719
            Genes (RNA)                       :: 48
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 126
            CDSs (without protein)            :: 126
            Pseudo Genes (ambiguous residues) :: 0 of 126
            Pseudo Genes (frameshifted)       :: 50 of 126
            Pseudo Genes (incomplete)         :: 83 of 126
            Pseudo Genes (internal stop)      :: 13 of 126
            Pseudo Genes (multiple problems)  :: 16 of 126
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5797412
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="ONE296"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Brazil: Sao Paulo"
                     /lat_lon="22.826907 S 47.064108 W"
                     /collection_date="2016"
                     /collected_by="Flavio A. Oliveira"
WGS         JAECVJ010000001-JAECVJ010000166
WGS_SCAFLD  NZ_JAECVJ010000001-NZ_JAECVJ010000166
//
LOCUS       NZ_JAECVM010000000   5836578 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain ONE299, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAECVM000000000
VERSION     NZ_JAECVM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17023883
            Assembly: GCF_056172495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5836578)
  AUTHORS   Esposito,F., Cardoso,B., Oliveira,F., Cerdeira,L., Levy,C.E. and
            Lincopan,N.
  TITLE     Draft genome of KPC-2-producing Klebsiella pneumoniae recovered
            from a human bloodstream infection sample in Brazil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5836578)
  AUTHORS   Esposito,F., Cardoso,B., Oliveira,F., Cerdeira,L., Levy,C.E. and
            Lincopan,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-DEC-2020) Microbiology, University of Sao Paulo,
            Lineu Prestes Avenue, Sao Paulo, Sao Paulo 05508-900, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAECVM000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JAECVM000000000.  This version of the
            project (01) has the accession number NZ_JAECVM010000000, and
            consists of sequences JAECVM010000001-JAECVM010000185.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Uniciclyer v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 201.4x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172495.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:05:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,887
            CDSs (total)                      :: 5,833
            Genes (coding)                    :: 5,673
            CDSs (with protein)               :: 5,673
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 160
            CDSs (without protein)            :: 160
            Pseudo Genes (ambiguous residues) :: 0 of 160
            Pseudo Genes (frameshifted)       :: 59 of 160
            Pseudo Genes (incomplete)         :: 99 of 160
            Pseudo Genes (internal stop)      :: 16 of 160
            Pseudo Genes (multiple problems)  :: 12 of 160
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5836578
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="ONE299"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Brazil: Sao Paulo"
                     /lat_lon="22.826907 S 47.064108 W"
                     /collection_date="2015"
                     /collected_by="Flavio A. Oliveira"
WGS         JAECVM010000001-JAECVM010000185
WGS_SCAFLD  NZ_JAECVM010000001-NZ_JAECVM010000185
//
LOCUS       NZ_JBIGMQ010000000   6053477 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E320, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGMQ000000000
VERSION     NZ_JBIGMQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130647
            Assembly: GCF_045572115.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 6053477)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGMQ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGMQ000000000.  This version of the
            project (01) has the accession number NZ_JBIGMQ010000000, and
            consists of sequences JBIGMQ010000001-JBIGMQ010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 125x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045572115.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:27:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,020
            CDSs (total)                      :: 5,897
            Genes (coding)                    :: 5,625
            CDSs (with protein)               :: 5,625
            Genes (RNA)                       :: 123
            rRNAs                             :: 9, 9, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 85
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 272
            CDSs (without protein)            :: 272
            Pseudo Genes (ambiguous residues) :: 0 of 272
            Pseudo Genes (frameshifted)       :: 166 of 272
            Pseudo Genes (incomplete)         :: 125 of 272
            Pseudo Genes (internal stop)      :: 33 of 272
            Pseudo Genes (multiple problems)  :: 45 of 272
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6053477
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E320"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGMQ010000001-JBIGMQ010000008
WGS_SCAFLD  NZ_JBIGMQ010000001-NZ_JBIGMQ010000008
//
LOCUS       NZ_JBIRAO010000000   5330144 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain BTF8T1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIRAO000000000
VERSION     NZ_JBIRAO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44467146
            Assembly: GCF_056153765.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5330144)
  AUTHORS   Reasoner,S.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JAN-2025) Department of Pathology, Microbiology and
            Immunology, Vanderbilt University Medical Center, 1211 21st Avenue
            South, Nashville, TN 37212, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIRAO000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIRAO000000000.  This version of the
            project (01) has the accession number NZ_JBIRAO010000000, and
            consists of sequences JBIRAO010000001-JBIRAO010000054.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 149x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056153765.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:57:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,307
            CDSs (total)                      :: 5,217
            Genes (coding)                    :: 5,085
            CDSs (with protein)               :: 5,085
            Genes (RNA)                       :: 90
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 132
            CDSs (without protein)            :: 132
            Pseudo Genes (ambiguous residues) :: 0 of 132
            Pseudo Genes (frameshifted)       :: 57 of 132
            Pseudo Genes (incomplete)         :: 79 of 132
            Pseudo Genes (internal stop)      :: 19 of 132
            Pseudo Genes (multiple problems)  :: 21 of 132
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5330144
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="BTF8T1"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="USA: Nashville, TN"
                     /lat_lon="36.1424 N 86.8014 W"
                     /collection_date="2023-10"
                     /collected_by="VUMC Urology"
WGS         JBIRAO010000001-JBIRAO010000054
WGS_SCAFLD  NZ_JBIRAO010000001-NZ_JBIRAO010000054
//
LOCUS       NZ_CAXOAZ010000000   5454301 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain FFMG-1331-6-21-B isolate
            FFMG_1331-6-21-B, whole genome shotgun sequencing project.
ACCESSION   NZ_CAXOAZ000000000
VERSION     NZ_CAXOAZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA115874780
            Sequence Read Archive: ERR13420982
            Assembly: GCF_964207285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5454301)
  AUTHORS   Kumburu,H.H., Sonda,T.B. and van Zwetselaar,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-JUL-2024) Kilimanjaro Clinical Research Institute,
            Moshi, Kilimanjaro, Tanzania
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAXOAZ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_CAXOAZ000000000.  This version of the
            project (01) has the accession number NZ_CAXOAZ010000000, and
            consists of sequences CAXOAZ010000001-CAXOAZ010000101.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964207285.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:02:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,404
            CDSs (total)                      :: 5,323
            Genes (coding)                    :: 5,184
            CDSs (with protein)               :: 5,184
            Genes (RNA)                       :: 81
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 139
            CDSs (without protein)            :: 139
            Pseudo Genes (ambiguous residues) :: 0 of 139
            Pseudo Genes (frameshifted)       :: 65 of 139
            Pseudo Genes (incomplete)         :: 72 of 139
            Pseudo Genes (internal stop)      :: 21 of 139
            Pseudo Genes (multiple problems)  :: 16 of 139
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5454301
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="FFMG-1331-6-21-B"
                     /isolate="FFMG_1331-6-21-B"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Tanzania"
                     /collection_date="2021"
                     /collected_by="Morogoro Regional Referral Hospital"
WGS         CAXOAZ010000001-CAXOAZ010000101
WGS_SCAFLD  NZ_CAXOAZ010000001-NZ_CAXOAZ010000101
//
LOCUS       NZ_JAECSS010000000   5583143 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CCBH27867, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAECSS000000000
VERSION     NZ_JAECSS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN16776114
            Assembly: GCF_016055295.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5583143)
  AUTHORS   Silveira,M.C., Claudio,R.-D.-S.M. and Ana Paula,C.-A.D.
  TITLE     WGS of multidrug-resistant bacteria from different Brazilian states
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5583143)
  AUTHORS   Silveira,M.C., Claudio,R.-D.-S.M. and Ana Paula,C.-A.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-DEC-2020) Laboratorio de Pesquisa em Infeccao
            Hospitalar, Instituto Oswaldo Cruz, Av. Brasil, 4365 - Manguinhos,
            Rio de Janeiro, RJ 21040-900, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAECSS000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JAECSS000000000.  This version of the
            project (01) has the accession number NZ_JAECSS010000000, and
            consists of sequences JAECSS010000001-JAECSS010000287.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_016055295.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:41:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,655
            CDSs (total)                      :: 5,598
            Genes (coding)                    :: 5,401
            CDSs (with protein)               :: 5,401
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 197
            CDSs (without protein)            :: 197
            Pseudo Genes (ambiguous residues) :: 0 of 197
            Pseudo Genes (frameshifted)       :: 54 of 197
            Pseudo Genes (incomplete)         :: 138 of 197
            Pseudo Genes (internal stop)      :: 23 of 197
            Pseudo Genes (multiple problems)  :: 16 of 197
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5583143
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CCBH27867"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Brazil"
                     /lat_lon="15.75 S 47.95 W"
                     /collection_date="2020-03-25"
                     /collected_by="LACEN"
WGS         JAECSS010000001-JAECSS010000287
WGS_SCAFLD  NZ_JAECSS010000001-NZ_JAECSS010000287
//
LOCUS       NZ_JBIRAS010000000   5585015 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain BTF15T-1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIRAS000000000
VERSION     NZ_JBIRAS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44467150
            Assembly: GCF_056153705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5585015)
  AUTHORS   Reasoner,S.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JAN-2025) Department of Pathology, Microbiology and
            Immunology, Vanderbilt University Medical Center, 1211 21st Avenue
            South, Nashville, TN 37212, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIRAS000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIRAS000000000.  This version of the
            project (01) has the accession number NZ_JBIRAS010000000, and
            consists of sequences JBIRAS010000001-JBIRAS010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 146x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056153705.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:02:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,452
            CDSs (total)                      :: 5,331
            Genes (coding)                    :: 5,219
            CDSs (with protein)               :: 5,219
            Genes (RNA)                       :: 121
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 112
            CDSs (without protein)            :: 112
            Pseudo Genes (ambiguous residues) :: 0 of 112
            Pseudo Genes (frameshifted)       :: 50 of 112
            Pseudo Genes (incomplete)         :: 63 of 112
            Pseudo Genes (internal stop)      :: 19 of 112
            Pseudo Genes (multiple problems)  :: 17 of 112
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5585015
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="BTF15T-1"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="USA: Nashville, TN"
                     /lat_lon="36.1424 N 86.8014 W"
                     /collection_date="2021-08"
                     /collected_by="VUMC Urology"
WGS         JBIRAS010000001-JBIRAS010000004
WGS_SCAFLD  NZ_JBIRAS010000001-NZ_JBIRAS010000004
//
LOCUS       NZ_JBIGQX010000000   5623973 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E139, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGQX000000000
VERSION     NZ_JBIGQX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130489
            Assembly: GCF_045574365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5623973)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGQX000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGQX000000000.  This version of the
            project (01) has the accession number NZ_JBIGQX010000000, and
            consists of sequences JBIGQX010000001-JBIGQX010000013.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 247x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045574365.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:50:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,593
            CDSs (total)                      :: 5,466
            Genes (coding)                    :: 5,232
            CDSs (with protein)               :: 5,232
            Genes (RNA)                       :: 127
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 17
            Pseudo Genes (total)              :: 234
            CDSs (without protein)            :: 234
            Pseudo Genes (ambiguous residues) :: 0 of 234
            Pseudo Genes (frameshifted)       :: 135 of 234
            Pseudo Genes (incomplete)         :: 100 of 234
            Pseudo Genes (internal stop)      :: 25 of 234
            Pseudo Genes (multiple problems)  :: 23 of 234
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5623973
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E139"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGQX010000001-JBIGQX010000013
WGS_SCAFLD  NZ_JBIGQX010000001-NZ_JBIGQX010000013
//
LOCUS       NZ_JBIGSL010000000   5673406 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E75, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGSL000000000
VERSION     NZ_JBIGSL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130432
            Assembly: GCF_045575175.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5673406)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGSL000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGSL000000000.  This version of the
            project (01) has the accession number NZ_JBIGSL010000000, and
            consists of sequences JBIGSL010000001-JBIGSL010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 405x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575175.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:50:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,623
            CDSs (total)                      :: 5,494
            Genes (coding)                    :: 5,312
            CDSs (with protein)               :: 5,312
            Genes (RNA)                       :: 129
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 16
            Pseudo Genes (total)              :: 182
            CDSs (without protein)            :: 182
            Pseudo Genes (ambiguous residues) :: 0 of 182
            Pseudo Genes (frameshifted)       :: 103 of 182
            Pseudo Genes (incomplete)         :: 93 of 182
            Pseudo Genes (internal stop)      :: 31 of 182
            Pseudo Genes (multiple problems)  :: 36 of 182
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5673406
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E75"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGSL010000001-JBIGSL010000005
WGS_SCAFLD  NZ_JBIGSL010000001-NZ_JBIGSL010000005
//
LOCUS       NZ_JAPMJG010000000   5769746 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain KP91, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAPMJG000000000
VERSION     NZ_JAPMJG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN30440843
            Assembly: GCF_026410625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5769746)
  AUTHORS   Wu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-AUG-2022) Clinical Laboratory, Sir Run Run Shaw
            Hospital, Zhejiang University School of Medicine, Qingchun,
            Hangzhou, Zhejiang 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAPMJG000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JAPMJG000000000.  This version of the
            project (01) has the accession number NZ_JAPMJG010000000, and
            consists of sequences JAPMJG010000001-JAPMJG010000107.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v. v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 10.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_026410625.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:49:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,660
            CDSs (total)                      :: 5,567
            Genes (coding)                    :: 5,402
            CDSs (with protein)               :: 5,402
            Genes (RNA)                       :: 93
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 80
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 165
            CDSs (without protein)            :: 165
            Pseudo Genes (ambiguous residues) :: 0 of 165
            Pseudo Genes (frameshifted)       :: 70 of 165
            Pseudo Genes (incomplete)         :: 100 of 165
            Pseudo Genes (internal stop)      :: 30 of 165
            Pseudo Genes (multiple problems)  :: 29 of 165
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5769746
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="KP91"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="29.11 N 118.21 E"
                     /collection_date="2020-12-03"
WGS         JAPMJG010000001-JAPMJG010000107
WGS_SCAFLD  NZ_JAPMJG010000001-NZ_JAPMJG010000107
//
LOCUS       NZ_JBIRAQ010000000   5536598 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain BTF28T-1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIRAQ000000000
VERSION     NZ_JBIRAQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44467148
            Assembly: GCF_056153745.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5536598)
  AUTHORS   Reasoner,S.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JAN-2025) Department of Pathology, Microbiology and
            Immunology, Vanderbilt University Medical Center, 1211 21st Avenue
            South, Nashville, TN 37212, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIRAQ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIRAQ000000000.  This version of the
            project (01) has the accession number NZ_JBIRAQ010000000, and
            consists of sequences JBIRAQ010000001-JBIRAQ010000131.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 147x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056153745.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:03:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,538
            CDSs (total)                      :: 5,446
            Genes (coding)                    :: 5,274
            CDSs (with protein)               :: 5,274
            Genes (RNA)                       :: 92
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 78
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 172
            CDSs (without protein)            :: 172
            Pseudo Genes (ambiguous residues) :: 0 of 172
            Pseudo Genes (frameshifted)       :: 75 of 172
            Pseudo Genes (incomplete)         :: 96 of 172
            Pseudo Genes (internal stop)      :: 36 of 172
            Pseudo Genes (multiple problems)  :: 30 of 172
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5536598
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="BTF28T-1"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="USA: Nashville, TN"
                     /lat_lon="36.1424 N 86.8014 W"
                     /collection_date="2021-01"
                     /collected_by="VUMC Urology"
WGS         JBIRAQ010000001-JBIRAQ010000131
WGS_SCAFLD  NZ_JBIRAQ010000001-NZ_JBIRAQ010000131
//
LOCUS       NZ_JBIRAP010000000   5661626 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain BTF28T-2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIRAP000000000
VERSION     NZ_JBIRAP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44467147
            Assembly: GCF_056153785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5661626)
  AUTHORS   Reasoner,S.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JAN-2025) Department of Pathology, Microbiology and
            Immunology, Vanderbilt University Medical Center, 1211 21st Avenue
            South, Nashville, TN 37212, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIRAP000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIRAP000000000.  This version of the
            project (01) has the accession number NZ_JBIRAP010000000, and
            consists of sequences JBIRAP010000001-JBIRAP010000006.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 149x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056153785.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:02:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,622
            CDSs (total)                      :: 5,496
            Genes (coding)                    :: 5,314
            CDSs (with protein)               :: 5,314
            Genes (RNA)                       :: 126
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 182
            CDSs (without protein)            :: 182
            Pseudo Genes (ambiguous residues) :: 0 of 182
            Pseudo Genes (frameshifted)       :: 82 of 182
            Pseudo Genes (incomplete)         :: 100 of 182
            Pseudo Genes (internal stop)      :: 35 of 182
            Pseudo Genes (multiple problems)  :: 30 of 182
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5661626
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="BTF28T-2"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="USA: Nashville, TN"
                     /lat_lon="36.1424 N 86.8014 W"
                     /collection_date="2020-12"
                     /collected_by="VUMC Urology"
WGS         JBIRAP010000001-JBIRAP010000006
WGS_SCAFLD  NZ_JBIRAP010000001-NZ_JBIRAP010000006
//
LOCUS       NZ_JBIGTC010000000   5932726 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E50, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGTC000000000
VERSION     NZ_JBIGTC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130410
            Assembly: GCF_045575575.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5932726)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGTC000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGTC000000000.  This version of the
            project (01) has the accession number NZ_JBIGTC010000000, and
            consists of sequences JBIGTC010000001-JBIGTC010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 394x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575575.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:04:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,832
            CDSs (total)                      :: 5,708
            Genes (coding)                    :: 5,494
            CDSs (with protein)               :: 5,494
            Genes (RNA)                       :: 124
            rRNAs                             :: 9, 9, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 214
            CDSs (without protein)            :: 214
            Pseudo Genes (ambiguous residues) :: 0 of 214
            Pseudo Genes (frameshifted)       :: 108 of 214
            Pseudo Genes (incomplete)         :: 111 of 214
            Pseudo Genes (internal stop)      :: 36 of 214
            Pseudo Genes (multiple problems)  :: 36 of 214
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5932726
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E50"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGTC010000001-JBIGTC010000006
WGS_SCAFLD  NZ_JBIGTC010000001-NZ_JBIGTC010000006
//
LOCUS       NZ_JBIWZX010000000   5687657 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1207, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIWZX000000000
VERSION     NZ_JBIWZX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247356
            Assembly: GCF_045618885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5687657)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIWZX000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIWZX000000000.  This version of the
            project (01) has the accession number NZ_JBIWZX010000000, and
            consists of sequences JBIWZX010000001-JBIWZX010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 238x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045618885.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:39:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,706
            CDSs (total)                      :: 5,575
            Genes (coding)                    :: 5,417
            CDSs (with protein)               :: 5,417
            Genes (RNA)                       :: 131
            rRNAs                             :: 9, 9, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 8 (5S, 16S, 23S)
            tRNAs                             :: 91
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 158
            CDSs (without protein)            :: 158
            Pseudo Genes (ambiguous residues) :: 0 of 158
            Pseudo Genes (frameshifted)       :: 89 of 158
            Pseudo Genes (incomplete)         :: 72 of 158
            Pseudo Genes (internal stop)      :: 14 of 158
            Pseudo Genes (multiple problems)  :: 16 of 158
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5687657
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1207"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIWZX010000001-JBIWZX010000007
WGS_SCAFLD  NZ_JBIWZX010000001-NZ_JBIWZX010000007
//
LOCUS       NZ_JBRWZN010000000   5295966 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain MEI148-20KP, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWZN000000000
VERSION     NZ_JBRWZN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50713146
            Assembly: GCF_056155125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5295966)
  AUTHORS   Spahr,Y., Collaud,A. and Perreten,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2025) Institute of Veterinary Bacteriology,
            University of Bern, Laenggassstrasse 122, Bern 3012, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWZN000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWZN000000000.  This version of the
            project (01) has the accession number NZ_JBRWZN010000000, and
            consists of sequences JBRWZN010000001-JBRWZN010000003.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Autocycler v. 0.5.2; Polypolish v. 0.6.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 309.777803218525x
            Sequencing Technology  :: Oxford Nanopore MinION; Illumina NovaSeq
                                      6000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155125.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:32:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,216
            CDSs (total)                      :: 5,090
            Genes (coding)                    :: 5,021
            CDSs (with protein)               :: 5,021
            Genes (RNA)                       :: 126
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 32 of 69
            Pseudo Genes (incomplete)         :: 38 of 69
            Pseudo Genes (internal stop)      :: 7 of 69
            Pseudo Genes (multiple problems)  :: 7 of 69
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5295966
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="MEI148-20KP"
                     /isolation_source="Soil surface"
                     /db_xref="taxon:573"
                     /geo_loc_name="Switzerland: Bern"
                     /collection_date="2020-03"
                     /collected_by="Veterinary staff"
WGS         JBRWZN010000001-JBRWZN010000003
WGS_SCAFLD  NZ_CM149553
WGS_SCAFLD  NZ_JBRWZN010000002-NZ_JBRWZN010000003
//
LOCUS       NZ_JARCXA010000000   5463686 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain MGL_104_B6, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JARCXA000000000
VERSION     NZ_JARCXA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32745662
            Assembly: GCF_036530215.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5463686)
  AUTHORS   Das,B.
  TITLE     Heterogeneity in antimicrobial resistance traits among multidrug
            resitant Gram-negative bacterial pathogens isolated from India:
            phenotypic, genotypic and proteomic analyses
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5463686)
  AUTHORS   Das,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JAN-2023) Infection and Immunology, Translational
            Health Science and Technology Institute, Gurgaon-Faridabad
            expressway, Faridabad, Haryana 121001, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARCXA000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JARCXA000000000.  This version of the
            project (01) has the accession number NZ_JARCXA010000000, and
            consists of sequences JARCXA010000001-JARCXA010000113.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 38x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_036530215.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:47:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,438
            CDSs (total)                      :: 5,346
            Genes (coding)                    :: 5,189
            CDSs (with protein)               :: 5,189
            Genes (RNA)                       :: 92
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 78
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 157
            CDSs (without protein)            :: 157
            Pseudo Genes (ambiguous residues) :: 0 of 157
            Pseudo Genes (frameshifted)       :: 63 of 157
            Pseudo Genes (incomplete)         :: 90 of 157
            Pseudo Genes (internal stop)      :: 24 of 157
            Pseudo Genes (multiple problems)  :: 18 of 157
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5463686
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="MGL_104_B6"
                     /isolation_source="Tissue"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="India: Chattisgarh, Jan Swasthya Sahyog"
                     /lat_lon="21.27 N 81.86 E"
                     /collection_date="2020-10-23"
                     /collected_by="THSTI-Molecular Genetics Laboratory"
WGS         JARCXA010000001-JARCXA010000113
WGS_SCAFLD  NZ_JARCXA010000001-NZ_JARCXA010000113
//
LOCUS       NZ_JBIRAM010000000   5106138 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain BTF61T-1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIRAM000000000
VERSION     NZ_JBIRAM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44467144
            Assembly: GCF_056153825.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5106138)
  AUTHORS   Reasoner,S.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JAN-2025) Department of Pathology, Microbiology and
            Immunology, Vanderbilt University Medical Center, 1211 21st Avenue
            South, Nashville, TN 37212, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIRAM000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIRAM000000000.  This version of the
            project (01) has the accession number NZ_JBIRAM010000000, and
            consists of sequences JBIRAM010000001-JBIRAM010000022.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 151x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056153825.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:06:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,031
            CDSs (total)                      :: 4,939
            Genes (coding)                    :: 4,856
            CDSs (with protein)               :: 4,856
            Genes (RNA)                       :: 92
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 75
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 83
            CDSs (without protein)            :: 83
            Pseudo Genes (ambiguous residues) :: 0 of 83
            Pseudo Genes (frameshifted)       :: 41 of 83
            Pseudo Genes (incomplete)         :: 39 of 83
            Pseudo Genes (internal stop)      :: 14 of 83
            Pseudo Genes (multiple problems)  :: 9 of 83
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5106138
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="BTF61T-1"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="USA: Nashville, TN"
                     /lat_lon="36.1424 N 86.8014 W"
                     /collection_date="2022-10"
                     /collected_by="VUMC Urology"
WGS         JBIRAM010000001-JBIRAM010000022
WGS_SCAFLD  NZ_JBIRAM010000001-NZ_JBIRAM010000022
//
LOCUS       NZ_JBIXCX010000000   5828569 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1117, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXCX000000000
VERSION     NZ_JBIXCX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247278
            Assembly: GCF_045620445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5828569)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXCX000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXCX000000000.  This version of the
            project (01) has the accession number NZ_JBIXCX010000000, and
            consists of sequences JBIXCX010000001-JBIXCX010000011.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 298x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045620445.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:47:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,777
            CDSs (total)                      :: 5,654
            Genes (coding)                    :: 5,466
            CDSs (with protein)               :: 5,466
            Genes (RNA)                       :: 123
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 188
            CDSs (without protein)            :: 188
            Pseudo Genes (ambiguous residues) :: 0 of 188
            Pseudo Genes (frameshifted)       :: 104 of 188
            Pseudo Genes (incomplete)         :: 88 of 188
            Pseudo Genes (internal stop)      :: 27 of 188
            Pseudo Genes (multiple problems)  :: 26 of 188
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5828569
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1117"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXCX010000001-JBIXCX010000011
WGS_SCAFLD  NZ_JBIXCX010000001-NZ_JBIXCX010000011
//
LOCUS       NZ_JBFUPG010000000   5730636 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 27ML, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBFUPG000000000
VERSION     NZ_JBFUPG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN42912220
            Assembly: GCF_041061655.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5730636)
  AUTHORS   Gaibani,P. and Secci,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-JUL-2024) Diagnostics and Public Health, Section of
            Microbiology, University of Verona, Italy, Strada le grazie, 8,
            Verona 37134, Italy
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBFUPG000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBFUPG000000000.  This version of the
            project (01) has the accession number NZ_JBFUPG010000000, and
            consists of sequences JBFUPG010000001-JBFUPG010000165.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v. 3.16.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 99x
            Sequencing Technology  :: Illumina iSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_041061655.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:00:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,890
            CDSs (total)                      :: 5,779
            Genes (coding)                    :: 5,614
            CDSs (with protein)               :: 5,614
            Genes (RNA)                       :: 111
            rRNAs                             :: 8, 8, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 4, 8, 4 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 165
            CDSs (without protein)            :: 165
            Pseudo Genes (ambiguous residues) :: 0 of 165
            Pseudo Genes (frameshifted)       :: 48 of 165
            Pseudo Genes (incomplete)         :: 124 of 165
            Pseudo Genes (internal stop)      :: 13 of 165
            Pseudo Genes (multiple problems)  :: 17 of 165
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5730636
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="27ML"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Italy: Torino"
                     /lat_lon="45.04595651 N 7.67493876 E"
                     /collection_date="2022"
                     /collected_by="Azienda ospedaliero universitaria Torino"
WGS         JBFUPG010000001-JBFUPG010000165
WGS_SCAFLD  NZ_JBFUPG010000001-NZ_JBFUPG010000165
//
LOCUS       NZ_JBIXDQ010000000   5687336 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1096, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXDQ000000000
VERSION     NZ_JBIXDQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247259
            Assembly: GCF_045620785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5687336)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXDQ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXDQ000000000.  This version of the
            project (01) has the accession number NZ_JBIXDQ010000000, and
            consists of sequences JBIXDQ010000001-JBIXDQ010000003.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 318x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045620785.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:42:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,563
            CDSs (total)                      :: 5,441
            Genes (coding)                    :: 5,279
            CDSs (with protein)               :: 5,279
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 162
            CDSs (without protein)            :: 162
            Pseudo Genes (ambiguous residues) :: 0 of 162
            Pseudo Genes (frameshifted)       :: 84 of 162
            Pseudo Genes (incomplete)         :: 83 of 162
            Pseudo Genes (internal stop)      :: 29 of 162
            Pseudo Genes (multiple problems)  :: 31 of 162
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5687336
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1096"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXDQ010000001-JBIXDQ010000003
WGS_SCAFLD  NZ_JBIXDQ010000001-NZ_JBIXDQ010000003
//
LOCUS       NZ_JBRKUF010000000   5767699 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain ST4536, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRKUF000000000
VERSION     NZ_JBRKUF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52211344
            Assembly: GCF_056156105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5767699)
  AUTHORS   Zanon,I.P. and Silva,R.O.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-OCT-2025) Department of Preventive Veterinary
            Medicine, Federal University of Minas Gerais, Avenida Antonio
            Carlos, Belo Horizonte, Minas Gerais 31270901, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRKUF000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRKUF000000000.  This version of the
            project (01) has the accession number NZ_JBRKUF010000000, and
            consists of sequences JBRKUF010000001-JBRKUF010000100.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 82.67x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056156105.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:36:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,779
            CDSs (total)                      :: 5,685
            Genes (coding)                    :: 5,557
            CDSs (with protein)               :: 5,557
            Genes (RNA)                       :: 94
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 80
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 46 of 128
            Pseudo Genes (incomplete)         :: 80 of 128
            Pseudo Genes (internal stop)      :: 22 of 128
            Pseudo Genes (multiple problems)  :: 16 of 128
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5767699
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="ST4536"
                     /isolation_source="Carcasses"
                     /host="Gallus gallus domesticus"
                     /db_xref="taxon:573"
                     /geo_loc_name="Brazil: Minas Gerais"
                     /collection_date="2024"
                     /collected_by="LAEV - UFMG"
WGS         JBRKUF010000001-JBRKUF010000100
WGS_SCAFLD  NZ_JBRKUF010000001-NZ_JBRKUF010000100
//
LOCUS       NZ_JBIGMA010000000   5563336 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E340, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGMA000000000
VERSION     NZ_JBIGMA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130665
            Assembly: GCF_045571755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5563336)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGMA000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGMA000000000.  This version of the
            project (01) has the accession number NZ_JBIGMA010000000, and
            consists of sequences JBIGMA010000001-JBIGMA010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 114x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045571755.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:36:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,512
            CDSs (total)                      :: 5,387
            Genes (coding)                    :: 5,194
            CDSs (with protein)               :: 5,194
            Genes (RNA)                       :: 125
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 15
            Pseudo Genes (total)              :: 193
            CDSs (without protein)            :: 193
            Pseudo Genes (ambiguous residues) :: 0 of 193
            Pseudo Genes (frameshifted)       :: 104 of 193
            Pseudo Genes (incomplete)         :: 87 of 193
            Pseudo Genes (internal stop)      :: 25 of 193
            Pseudo Genes (multiple problems)  :: 20 of 193
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5563336
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E340"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGMA010000001-JBIGMA010000006
WGS_SCAFLD  NZ_JBIGMA010000001-NZ_JBIGMA010000006
//
LOCUS       NZ_JAMHBT010000000   5506215 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain GDKL-41, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAMHBT000000000
VERSION     NZ_JAMHBT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN28159629
            Assembly: GCF_040982775.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5506215)
  AUTHORS   Xiang,R.
  TITLE     Colistin- and carbapenem-resistant Resistant Enterobacterales
            Isolated from Chicken Farms
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5506215)
  AUTHORS   Xiang,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-MAY-2022) The Second Affiliated Hospital, Chongqing
            Medical University, Tianwen, Chongqing, Chongqing 400010, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAMHBT000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JAMHBT000000000.  This version of the
            project (01) has the accession number NZ_JAMHBT010000000, and
            consists of sequences JAMHBT010000001-JAMHBT010000063.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_040982775.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:00:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,477
            CDSs (total)                      :: 5,401
            Genes (coding)                    :: 5,297
            CDSs (with protein)               :: 5,297
            Genes (RNA)                       :: 76
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 61
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 104
            CDSs (without protein)            :: 104
            Pseudo Genes (ambiguous residues) :: 0 of 104
            Pseudo Genes (frameshifted)       :: 46 of 104
            Pseudo Genes (incomplete)         :: 66 of 104
            Pseudo Genes (internal stop)      :: 13 of 104
            Pseudo Genes (multiple problems)  :: 17 of 104
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5506215
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="GDKL-41"
                     /isolation_source="chicken farm"
                     /host="chicken"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /collection_date="2021-08"
WGS         JAMHBT010000001-JAMHBT010000063
WGS_SCAFLD  NZ_JAMHBT010000001-NZ_JAMHBT010000063
//
LOCUS       NZ_JBIGNA010000000   5272442 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E309, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGNA000000000
VERSION     NZ_JBIGNA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130637
            Assembly: GCF_045572315.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5272442)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGNA000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGNA000000000.  This version of the
            project (01) has the accession number NZ_JBIGNA010000000, and
            consists of sequences JBIGNA010000001-JBIGNA010000003.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 86x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045572315.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:19:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,157
            CDSs (total)                      :: 5,029
            Genes (coding)                    :: 4,941
            CDSs (with protein)               :: 4,941
            Genes (RNA)                       :: 128
            rRNAs                             :: 9, 9, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 9 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 88
            CDSs (without protein)            :: 88
            Pseudo Genes (ambiguous residues) :: 0 of 88
            Pseudo Genes (frameshifted)       :: 45 of 88
            Pseudo Genes (incomplete)         :: 43 of 88
            Pseudo Genes (internal stop)      :: 13 of 88
            Pseudo Genes (multiple problems)  :: 11 of 88
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5272442
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E309"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGNA010000001-JBIGNA010000003
WGS_SCAFLD  NZ_JBIGNA010000001-NZ_JBIGNA010000003
//
LOCUS       NZ_JAKOGA010000000   5676980 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain E7, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAKOGA000000000
VERSION     NZ_JAKOGA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN25761394
            Assembly: GCF_022501275.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5676980)
  AUTHORS   Yang,F.
  TITLE     Genome sequence of Klebsiella pneumoniae E7
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5676980)
  AUTHORS   Yang,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2022) Laboratory Medicine, Yuhuangding Hospital,
            Department of Laboratory Medicine, Qingdao University Medical
            College Affiliated Yantai Yuhuangding, Yantai, Shandong 264000,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAKOGA000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JAKOGA000000000.  This version of the
            project (01) has the accession number NZ_JAKOGA010000000, and
            consists of sequences JAKOGA010000001-JAKOGA010000094.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 120.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_022501275.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:51:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,682
            CDSs (total)                      :: 5,567
            Genes (coding)                    :: 5,431
            CDSs (with protein)               :: 5,431
            Genes (RNA)                       :: 115
            rRNAs                             :: 11, 4, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 9, 3, 5 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 136
            CDSs (without protein)            :: 136
            Pseudo Genes (ambiguous residues) :: 0 of 136
            Pseudo Genes (frameshifted)       :: 63 of 136
            Pseudo Genes (incomplete)         :: 80 of 136
            Pseudo Genes (internal stop)      :: 25 of 136
            Pseudo Genes (multiple problems)  :: 28 of 136
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5676980
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="E7"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China: Yantai"
                     /collection_date="2019-01-03"
WGS         JAKOGA010000001-JAKOGA010000094
WGS_SCAFLD  NZ_JAKOGA010000001-NZ_JAKOGA010000094
//
LOCUS       NZ_JBRKUD010000000   5596417 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain ST307, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBRKUD000000000
VERSION     NZ_JBRKUD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52211346
            Assembly: GCF_056156065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5596417)
  AUTHORS   Zanon,I.P. and Silva,R.O.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-OCT-2025) Department of Preventive Veterinary
            Medicine, Federal University of Minas Gerais, Avenida Antonio
            Carlos, Belo Horizonte, Minas Gerais 31270901, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRKUD000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRKUD000000000.  This version of the
            project (01) has the accession number NZ_JBRKUD010000000, and
            consists of sequences JBRKUD010000001-JBRKUD010000094.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 96.07x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056156065.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:20:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,534
            CDSs (total)                      :: 5,440
            Genes (coding)                    :: 5,318
            CDSs (with protein)               :: 5,318
            Genes (RNA)                       :: 94
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 122
            CDSs (without protein)            :: 122
            Pseudo Genes (ambiguous residues) :: 0 of 122
            Pseudo Genes (frameshifted)       :: 54 of 122
            Pseudo Genes (incomplete)         :: 72 of 122
            Pseudo Genes (internal stop)      :: 19 of 122
            Pseudo Genes (multiple problems)  :: 19 of 122
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5596417
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="ST307"
                     /isolation_source="Carcasses"
                     /host="Gallus gallus domesticus"
                     /db_xref="taxon:573"
                     /geo_loc_name="Brazil: Minas Gerais"
                     /collection_date="2024"
                     /collected_by="LAEV - UFMG"
WGS         JBRKUD010000001-JBRKUD010000094
WGS_SCAFLD  NZ_JBRKUD010000001-NZ_JBRKUD010000094
//
LOCUS       NZ_JBIGPU010000000   5634634 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E183, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGPU000000000
VERSION     NZ_JBIGPU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130531
            Assembly: GCF_045573825.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5634634)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGPU000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGPU000000000.  This version of the
            project (01) has the accession number NZ_JBIGPU010000000, and
            consists of sequences JBIGPU010000001-JBIGPU010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 267x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045573825.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:44:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,622
            CDSs (total)                      :: 5,501
            Genes (coding)                    :: 5,312
            CDSs (with protein)               :: 5,312
            Genes (RNA)                       :: 121
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 189
            CDSs (without protein)            :: 189
            Pseudo Genes (ambiguous residues) :: 0 of 189
            Pseudo Genes (frameshifted)       :: 115 of 189
            Pseudo Genes (incomplete)         :: 75 of 189
            Pseudo Genes (internal stop)      :: 23 of 189
            Pseudo Genes (multiple problems)  :: 20 of 189
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5634634
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E183"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGPU010000001-JBIGPU010000008
WGS_SCAFLD  NZ_JBIGPU010000001-NZ_JBIGPU010000008
//
LOCUS       NZ_JBRKUE010000000   5482100 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain ST323, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBRKUE000000000
VERSION     NZ_JBRKUE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52211345
            Assembly: GCF_056156085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5482100)
  AUTHORS   Zanon,I.P. and Silva,R.O.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-OCT-2025) Department of Preventive Veterinary
            Medicine, Federal University of Minas Gerais, Avenida Antonio
            Carlos, Belo Horizonte, Minas Gerais 31270901, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRKUE000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRKUE000000000.  This version of the
            project (01) has the accession number NZ_JBRKUE010000000, and
            consists of sequences JBRKUE010000001-JBRKUE010000073.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 82.26x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056156085.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:13:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,388
            CDSs (total)                      :: 5,301
            Genes (coding)                    :: 5,186
            CDSs (with protein)               :: 5,186
            Genes (RNA)                       :: 87
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 75
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 115
            CDSs (without protein)            :: 115
            Pseudo Genes (ambiguous residues) :: 0 of 115
            Pseudo Genes (frameshifted)       :: 48 of 115
            Pseudo Genes (incomplete)         :: 69 of 115
            Pseudo Genes (internal stop)      :: 16 of 115
            Pseudo Genes (multiple problems)  :: 16 of 115
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5482100
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="ST323"
                     /isolation_source="Carcasses"
                     /host="Gallus gallus domesticus"
                     /db_xref="taxon:573"
                     /geo_loc_name="Brazil: Minas Gerais"
                     /collection_date="2024"
                     /collected_by="LAEV - UFMG"
WGS         JBRKUE010000001-JBRKUE010000073
WGS_SCAFLD  NZ_JBRKUE010000001-NZ_JBRKUE010000073
//
LOCUS       NZ_JBIGQU010000000   5456270 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E142, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGQU000000000
VERSION     NZ_JBIGQU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130492
            Assembly: GCF_045574325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5456270)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGQU000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGQU000000000.  This version of the
            project (01) has the accession number NZ_JBIGQU010000000, and
            consists of sequences JBIGQU010000001-JBIGQU010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 93x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045574325.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:51:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,415
            CDSs (total)                      :: 5,295
            Genes (coding)                    :: 5,100
            CDSs (with protein)               :: 5,100
            Genes (RNA)                       :: 120
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 195
            CDSs (without protein)            :: 195
            Pseudo Genes (ambiguous residues) :: 0 of 195
            Pseudo Genes (frameshifted)       :: 81 of 195
            Pseudo Genes (incomplete)         :: 113 of 195
            Pseudo Genes (internal stop)      :: 24 of 195
            Pseudo Genes (multiple problems)  :: 20 of 195
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5456270
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E142"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGQU010000001-JBIGQU010000007
WGS_SCAFLD  NZ_JBIGQU010000001-NZ_JBIGQU010000007
//
LOCUS       NZ_JBIGSE010000000   5860707 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E84, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGSE000000000
VERSION     NZ_JBIGSE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130441
            Assembly: GCF_045575025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5860707)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGSE000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGSE000000000.  This version of the
            project (01) has the accession number NZ_JBIGSE010000000, and
            consists of sequences JBIGSE010000001-JBIGSE010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 120x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575025.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:37:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,864
            CDSs (total)                      :: 5,743
            Genes (coding)                    :: 5,550
            CDSs (with protein)               :: 5,550
            Genes (RNA)                       :: 121
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 193
            CDSs (without protein)            :: 193
            Pseudo Genes (ambiguous residues) :: 0 of 193
            Pseudo Genes (frameshifted)       :: 107 of 193
            Pseudo Genes (incomplete)         :: 88 of 193
            Pseudo Genes (internal stop)      :: 23 of 193
            Pseudo Genes (multiple problems)  :: 21 of 193
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5860707
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E84"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGSE010000001-JBIGSE010000005
WGS_SCAFLD  NZ_JBIGSE010000001-NZ_JBIGSE010000005
//
LOCUS       NZ_JBRWOH010000000   5681185 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 21P1280, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWOH000000000
VERSION     NZ_JBRWOH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385086
            Assembly: GCF_056162305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5681185)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5681185)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWOH000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWOH000000000.  This version of the
            project (01) has the accession number NZ_JBRWOH010000000, and
            consists of sequences JBRWOH010000001-JBRWOH010000104.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162305.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:00:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,761
            CDSs (total)                      :: 5,679
            Genes (coding)                    :: 5,542
            CDSs (with protein)               :: 5,542
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 4 (16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 137
            CDSs (without protein)            :: 137
            Pseudo Genes (ambiguous residues) :: 0 of 137
            Pseudo Genes (frameshifted)       :: 49 of 137
            Pseudo Genes (incomplete)         :: 92 of 137
            Pseudo Genes (internal stop)      :: 20 of 137
            Pseudo Genes (multiple problems)  :: 19 of 137
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5681185
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="21P1280"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982740 N 116.360012 E"
                     /collection_date="2021-11-26"
                     /collected_by="Ping Yang"
                     /genotype="ST11"
WGS         JBRWOH010000001-JBRWOH010000104
WGS_SCAFLD  NZ_JBRWOH010000001-NZ_JBRWOH010000104
//
LOCUS       NZ_JBIGTF010000000   5474836 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E44, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGTF000000000
VERSION     NZ_JBIGTF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130407
            Assembly: GCF_045575545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5474836)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGTF000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGTF000000000.  This version of the
            project (01) has the accession number NZ_JBIGTF010000000, and
            consists of sequences JBIGTF010000001-JBIGTF010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 376x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575545.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:52:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,369
            CDSs (total)                      :: 5,249
            Genes (coding)                    :: 5,105
            CDSs (with protein)               :: 5,105
            Genes (RNA)                       :: 120
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 144
            CDSs (without protein)            :: 144
            Pseudo Genes (ambiguous residues) :: 0 of 144
            Pseudo Genes (frameshifted)       :: 89 of 144
            Pseudo Genes (incomplete)         :: 61 of 144
            Pseudo Genes (internal stop)      :: 27 of 144
            Pseudo Genes (multiple problems)  :: 29 of 144
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5474836
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E44"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGTF010000001-JBIGTF010000008
WGS_SCAFLD  NZ_JBIGTF010000001-NZ_JBIGTF010000008
//
LOCUS       NZ_JBRWOI010000000   5701451 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 21P948, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWOI000000000
VERSION     NZ_JBRWOI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385085
            Assembly: GCF_056162285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5701451)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5701451)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWOI000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWOI000000000.  This version of the
            project (01) has the accession number NZ_JBRWOI010000000, and
            consists of sequences JBRWOI010000001-JBRWOI010000097.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162285.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:05:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,723
            CDSs (total)                      :: 5,645
            Genes (coding)                    :: 5,502
            CDSs (with protein)               :: 5,502
            Genes (RNA)                       :: 78
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 143
            CDSs (without protein)            :: 143
            Pseudo Genes (ambiguous residues) :: 0 of 143
            Pseudo Genes (frameshifted)       :: 53 of 143
            Pseudo Genes (incomplete)         :: 95 of 143
            Pseudo Genes (internal stop)      :: 20 of 143
            Pseudo Genes (multiple problems)  :: 21 of 143
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5701451
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="21P948"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982739 N 116.360012 E"
                     /collection_date="2021-08-05"
                     /collected_by="Ping Yang"
                     /genotype="ST11"
WGS         JBRWOI010000001-JBRWOI010000097
WGS_SCAFLD  NZ_JBRWOI010000001-NZ_JBRWOI010000097
//
LOCUS       NZ_JBRWOK010000000   5614467 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 21P644, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWOK000000000
VERSION     NZ_JBRWOK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385083
            Assembly: GCF_056162365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5614467)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5614467)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWOK000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWOK000000000.  This version of the
            project (01) has the accession number NZ_JBRWOK010000000, and
            consists of sequences JBRWOK010000001-JBRWOK010000072.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162365.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:09:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,501
            CDSs (total)                      :: 5,422
            Genes (coding)                    :: 5,271
            CDSs (with protein)               :: 5,271
            Genes (RNA)                       :: 79
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 151
            CDSs (without protein)            :: 151
            Pseudo Genes (ambiguous residues) :: 0 of 151
            Pseudo Genes (frameshifted)       :: 59 of 151
            Pseudo Genes (incomplete)         :: 92 of 151
            Pseudo Genes (internal stop)      :: 22 of 151
            Pseudo Genes (multiple problems)  :: 18 of 151
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5614467
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="21P644"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982737 N 116.360012 E"
                     /collection_date="2021-04-23"
                     /collected_by="Ping Yang"
                     /genotype="ST15"
WGS         JBRWOK010000001-JBRWOK010000072
WGS_SCAFLD  NZ_JBRWOK010000001-NZ_JBRWOK010000072
//
LOCUS       NZ_JBIGTL010000000   5571409 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E29, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGTL000000000
VERSION     NZ_JBIGTL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130396
            Assembly: GCF_045575715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5571409)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGTL000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGTL000000000.  This version of the
            project (01) has the accession number NZ_JBIGTL010000000, and
            consists of sequences JBIGTL010000001-JBIGTL010000218.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 414x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575715.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:05:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,737
            CDSs (total)                      :: 5,629
            Genes (coding)                    :: 5,342
            CDSs (with protein)               :: 5,342
            Genes (RNA)                       :: 108
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 287
            CDSs (without protein)            :: 287
            Pseudo Genes (ambiguous residues) :: 0 of 287
            Pseudo Genes (frameshifted)       :: 155 of 287
            Pseudo Genes (incomplete)         :: 149 of 287
            Pseudo Genes (internal stop)      :: 25 of 287
            Pseudo Genes (multiple problems)  :: 38 of 287
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5571409
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E29"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGTL010000001-JBIGTL010000218
WGS_SCAFLD  NZ_JBIGTL010000001-NZ_JBIGTL010000218
//
LOCUS       NZ_JBIGTU010000000   5850881 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E9, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGTU000000000
VERSION     NZ_JBIGTU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130377
            Assembly: GCF_045575915.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5850881)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGTU000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGTU000000000.  This version of the
            project (01) has the accession number NZ_JBIGTU010000000, and
            consists of sequences JBIGTU010000001-JBIGTU010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 109x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575915.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:06:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,742
            CDSs (total)                      :: 5,619
            Genes (coding)                    :: 5,406
            CDSs (with protein)               :: 5,406
            Genes (RNA)                       :: 123
            rRNAs                             :: 9, 9, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 213
            CDSs (without protein)            :: 213
            Pseudo Genes (ambiguous residues) :: 0 of 213
            Pseudo Genes (frameshifted)       :: 114 of 213
            Pseudo Genes (incomplete)         :: 99 of 213
            Pseudo Genes (internal stop)      :: 22 of 213
            Pseudo Genes (multiple problems)  :: 19 of 213
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5850881
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E9"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGTU010000001-JBIGTU010000009
WGS_SCAFLD  NZ_JBIGTU010000001-NZ_JBIGTU010000009
//
LOCUS       NZ_JBRWOP010000000   5648423 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 165, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBRWOP000000000
VERSION     NZ_JBRWOP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385078
            Assembly: GCF_056162465.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5648423)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5648423)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWOP000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWOP000000000.  This version of the
            project (01) has the accession number NZ_JBRWOP010000000, and
            consists of sequences JBRWOP010000001-JBRWOP010000112.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162465.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:10:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,731
            CDSs (total)                      :: 5,657
            Genes (coding)                    :: 5,527
            CDSs (with protein)               :: 5,527
            Genes (RNA)                       :: 74
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 130
            CDSs (without protein)            :: 130
            Pseudo Genes (ambiguous residues) :: 0 of 130
            Pseudo Genes (frameshifted)       :: 41 of 130
            Pseudo Genes (incomplete)         :: 92 of 130
            Pseudo Genes (internal stop)      :: 18 of 130
            Pseudo Genes (multiple problems)  :: 17 of 130
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5648423
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="165"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982732 N 116.360012 E"
                     /collection_date="2020-11-26"
                     /collected_by="Ping Yang"
                     /genotype="ST11"
WGS         JBRWOP010000001-JBRWOP010000112
WGS_SCAFLD  NZ_JBRWOP010000001-NZ_JBRWOP010000112
//
LOCUS       NZ_JBRWOE010000000   5716326 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain PE22856, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWOE000000000
VERSION     NZ_JBRWOE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385089
            Assembly: GCF_056162245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5716326)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5716326)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWOE000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWOE000000000.  This version of the
            project (01) has the accession number NZ_JBRWOE010000000, and
            consists of sequences JBRWOE010000001-JBRWOE010000125.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162245.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:10:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,761
            CDSs (total)                      :: 5,680
            Genes (coding)                    :: 5,509
            CDSs (with protein)               :: 5,509
            Genes (RNA)                       :: 81
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 171
            CDSs (without protein)            :: 171
            Pseudo Genes (ambiguous residues) :: 0 of 171
            Pseudo Genes (frameshifted)       :: 60 of 171
            Pseudo Genes (incomplete)         :: 120 of 171
            Pseudo Genes (internal stop)      :: 24 of 171
            Pseudo Genes (multiple problems)  :: 30 of 171
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5716326
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="PE22856"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982743 N 116.360012 E"
                     /collection_date="2023-02-05"
                     /collected_by="Ping Yang"
                     /genotype="ST11"
WGS         JBRWOE010000001-JBRWOE010000125
WGS_SCAFLD  NZ_JBRWOE010000001-NZ_JBRWOE010000125
//
LOCUS       NZ_JBIWYN010000000   5573922 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1249, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIWYN000000000
VERSION     NZ_JBIWYN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247392
            Assembly: GCF_045618085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5573922)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIWYN000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIWYN000000000.  This version of the
            project (01) has the accession number NZ_JBIWYN010000000, and
            consists of sequences JBIWYN010000001-JBIWYN010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 325x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045618085.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:36:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,433
            CDSs (total)                      :: 5,309
            Genes (coding)                    :: 5,156
            CDSs (with protein)               :: 5,156
            Genes (RNA)                       :: 124
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 154
            CDSs (without protein)            :: 153
            Pseudo Genes (ambiguous residues) :: 0 of 154
            Pseudo Genes (frameshifted)       :: 73 of 154
            Pseudo Genes (incomplete)         :: 77 of 154
            Pseudo Genes (internal stop)      :: 29 of 154
            Pseudo Genes (multiple problems)  :: 23 of 154
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5573922
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1249"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIWYN010000001-JBIWYN010000004
WGS_SCAFLD  NZ_JBIWYN010000001-NZ_JBIWYN010000004
//
LOCUS       NZ_JBRWOJ010000000   5495423 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 21P801, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWOJ000000000
VERSION     NZ_JBRWOJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385084
            Assembly: GCF_056162345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5495423)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5495423)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWOJ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWOJ000000000.  This version of the
            project (01) has the accession number NZ_JBRWOJ010000000, and
            consists of sequences JBRWOJ010000001-JBRWOJ010000100.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162345.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:11:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,492
            CDSs (total)                      :: 5,414
            Genes (coding)                    :: 5,298
            CDSs (with protein)               :: 5,298
            Genes (RNA)                       :: 78
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 116
            CDSs (without protein)            :: 116
            Pseudo Genes (ambiguous residues) :: 0 of 116
            Pseudo Genes (frameshifted)       :: 39 of 116
            Pseudo Genes (incomplete)         :: 78 of 116
            Pseudo Genes (internal stop)      :: 16 of 116
            Pseudo Genes (multiple problems)  :: 14 of 116
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5495423
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="21P801"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982738 N 116.360012 E"
                     /collection_date="2021-06-05"
                     /collected_by="Ping Yang"
                     /genotype="ST11"
WGS         JBRWOJ010000001-JBRWOJ010000100
WGS_SCAFLD  NZ_JBRWOJ010000001-NZ_JBRWOJ010000100
//
LOCUS       NZ_JBIWYY010000000   5564577 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1236, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIWYY000000000
VERSION     NZ_JBIWYY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247381
            Assembly: GCF_045618325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5564577)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIWYY000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIWYY000000000.  This version of the
            project (01) has the accession number NZ_JBIWYY010000000, and
            consists of sequences JBIWYY010000001-JBIWYY010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 632x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045618325.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:40:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,550
            CDSs (total)                      :: 5,426
            Genes (coding)                    :: 5,246
            CDSs (with protein)               :: 5,246
            Genes (RNA)                       :: 124
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 180
            CDSs (without protein)            :: 180
            Pseudo Genes (ambiguous residues) :: 0 of 180
            Pseudo Genes (frameshifted)       :: 104 of 180
            Pseudo Genes (incomplete)         :: 79 of 180
            Pseudo Genes (internal stop)      :: 19 of 180
            Pseudo Genes (multiple problems)  :: 19 of 180
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5564577
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1236"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIWYY010000001-JBIWYY010000007
WGS_SCAFLD  NZ_JBIWYY010000001-NZ_JBIWYY010000007
//
LOCUS       NZ_JBRWOG010000000   5697029 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 21P1284, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWOG000000000
VERSION     NZ_JBRWOG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385087
            Assembly: GCF_056162325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5697029)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5697029)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWOG000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWOG000000000.  This version of the
            project (01) has the accession number NZ_JBRWOG010000000, and
            consists of sequences JBRWOG010000001-JBRWOG010000111.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162325.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:14:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,741
            CDSs (total)                      :: 5,662
            Genes (coding)                    :: 5,530
            CDSs (with protein)               :: 5,530
            Genes (RNA)                       :: 79
            rRNAs                             :: 2, 3 (5S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 62
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 132
            CDSs (without protein)            :: 132
            Pseudo Genes (ambiguous residues) :: 0 of 132
            Pseudo Genes (frameshifted)       :: 46 of 132
            Pseudo Genes (incomplete)         :: 88 of 132
            Pseudo Genes (internal stop)      :: 20 of 132
            Pseudo Genes (multiple problems)  :: 19 of 132
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5697029
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="21P1284"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982741 N 116.360012 E"
                     /collection_date="2021-11-26"
                     /collected_by="Ping Yang"
                     /genotype="ST11"
WGS         JBRWOG010000001-JBRWOG010000111
WGS_SCAFLD  NZ_JBRWOG010000001-NZ_JBRWOG010000111
//
LOCUS       NZ_JBIXBU010000000   5916454 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1146, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXBU000000000
VERSION     NZ_JBIXBU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247307
            Assembly: GCF_045619805.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5916454)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXBU000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXBU000000000.  This version of the
            project (01) has the accession number NZ_JBIXBU010000000, and
            consists of sequences JBIXBU010000001-JBIXBU010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 143x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045619805.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:53:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,951
            CDSs (total)                      :: 5,829
            Genes (coding)                    :: 5,644
            CDSs (with protein)               :: 5,644
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 185
            CDSs (without protein)            :: 185
            Pseudo Genes (ambiguous residues) :: 0 of 185
            Pseudo Genes (frameshifted)       :: 87 of 185
            Pseudo Genes (incomplete)         :: 98 of 185
            Pseudo Genes (internal stop)      :: 25 of 185
            Pseudo Genes (multiple problems)  :: 22 of 185
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5916454
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1146"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXBU010000001-JBIXBU010000007
WGS_SCAFLD  NZ_JBIXBU010000001-NZ_JBIXBU010000007
//
LOCUS       NZ_JBRWOM010000000   5483208 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 231, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBRWOM000000000
VERSION     NZ_JBRWOM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385081
            Assembly: GCF_056162405.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5483208)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5483208)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWOM000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWOM000000000.  This version of the
            project (01) has the accession number NZ_JBRWOM010000000, and
            consists of sequences JBRWOM010000001-JBRWOM010000107.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162405.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:16:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,513
            CDSs (total)                      :: 5,441
            Genes (coding)                    :: 5,327
            CDSs (with protein)               :: 5,327
            Genes (RNA)                       :: 72
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 114
            CDSs (without protein)            :: 114
            Pseudo Genes (ambiguous residues) :: 0 of 114
            Pseudo Genes (frameshifted)       :: 36 of 114
            Pseudo Genes (incomplete)         :: 80 of 114
            Pseudo Genes (internal stop)      :: 13 of 114
            Pseudo Genes (multiple problems)  :: 12 of 114
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5483208
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="231"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982735 N 116.360012 E"
                     /collection_date="2020-12-11"
                     /collected_by="Ping Yang"
                     /genotype="ST11"
WGS         JBRWOM010000001-JBRWOM010000107
WGS_SCAFLD  NZ_JBRWOM010000001-NZ_JBRWOM010000107
//
LOCUS       NZ_JBIXCH010000000   5639545 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1133, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXCH000000000
VERSION     NZ_JBIXCH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247294
            Assembly: GCF_045620125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5639545)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXCH000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXCH000000000.  This version of the
            project (01) has the accession number NZ_JBIXCH010000000, and
            consists of sequences JBIXCH010000001-JBIXCH010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 779x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045620125.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:46:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,624
            CDSs (total)                      :: 5,502
            Genes (coding)                    :: 5,339
            CDSs (with protein)               :: 5,339
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 163
            CDSs (without protein)            :: 163
            Pseudo Genes (ambiguous residues) :: 0 of 163
            Pseudo Genes (frameshifted)       :: 99 of 163
            Pseudo Genes (incomplete)         :: 66 of 163
            Pseudo Genes (internal stop)      :: 20 of 163
            Pseudo Genes (multiple problems)  :: 21 of 163
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5639545
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1133"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXCH010000001-JBIXCH010000009
WGS_SCAFLD  NZ_JBIXCH010000001-NZ_JBIXCH010000009
//
LOCUS       NZ_JBRWOO010000000   5654551 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain PEKP4165, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWOO000000000
VERSION     NZ_JBRWOO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385079
            Assembly: GCF_056162445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5654551)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5654551)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWOO000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWOO000000000.  This version of the
            project (01) has the accession number NZ_JBRWOO010000000, and
            consists of sequences JBRWOO010000001-JBRWOO010000124.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162445.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:22:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,699
            CDSs (total)                      :: 5,624
            Genes (coding)                    :: 5,466
            CDSs (with protein)               :: 5,466
            Genes (RNA)                       :: 75
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 158
            CDSs (without protein)            :: 158
            Pseudo Genes (ambiguous residues) :: 0 of 158
            Pseudo Genes (frameshifted)       :: 48 of 158
            Pseudo Genes (incomplete)         :: 112 of 158
            Pseudo Genes (internal stop)      :: 21 of 158
            Pseudo Genes (multiple problems)  :: 17 of 158
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5654551
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="PEKP4165"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982733 N 116.360012 E"
                     /collection_date="2021-03-23"
                     /collected_by="Ping Yang"
                     /genotype="ST11"
WGS         JBRWOO010000001-JBRWOO010000124
WGS_SCAFLD  NZ_JBRWOO010000001-NZ_JBRWOO010000124
//
LOCUS       NZ_JBIXDJ010000000   5840300 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1103, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXDJ000000000
VERSION     NZ_JBIXDJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247266
            Assembly: GCF_045620725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5840300)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXDJ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXDJ000000000.  This version of the
            project (01) has the accession number NZ_JBIXDJ010000000, and
            consists of sequences JBIXDJ010000001-JBIXDJ010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 368x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045620725.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:47:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,757
            CDSs (total)                      :: 5,635
            Genes (coding)                    :: 5,435
            CDSs (with protein)               :: 5,435
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 200
            CDSs (without protein)            :: 200
            Pseudo Genes (ambiguous residues) :: 0 of 200
            Pseudo Genes (frameshifted)       :: 112 of 200
            Pseudo Genes (incomplete)         :: 100 of 200
            Pseudo Genes (internal stop)      :: 30 of 200
            Pseudo Genes (multiple problems)  :: 38 of 200
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5840300
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1103"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXDJ010000001-JBIXDJ010000006
WGS_SCAFLD  NZ_JBIXDJ010000001-NZ_JBIXDJ010000006
//
LOCUS       NZ_JBRWOL010000000   5755050 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain PEKP3078, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWOL000000000
VERSION     NZ_JBRWOL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385082
            Assembly: GCF_056162385.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5755050)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5755050)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWOL000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWOL000000000.  This version of the
            project (01) has the accession number NZ_JBRWOL010000000, and
            consists of sequences JBRWOL010000001-JBRWOL010000100.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162385.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:22:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,813
            CDSs (total)                      :: 5,738
            Genes (coding)                    :: 5,589
            CDSs (with protein)               :: 5,589
            Genes (RNA)                       :: 75
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 149
            CDSs (without protein)            :: 149
            Pseudo Genes (ambiguous residues) :: 0 of 149
            Pseudo Genes (frameshifted)       :: 60 of 149
            Pseudo Genes (incomplete)         :: 97 of 149
            Pseudo Genes (internal stop)      :: 24 of 149
            Pseudo Genes (multiple problems)  :: 29 of 149
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5755050
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="PEKP3078"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982736 N 116.360012 E"
                     /collection_date="2020-12-17"
                     /collected_by="Ping Yang"
                     /genotype="ST11"
WGS         JBRWOL010000001-JBRWOL010000100
WGS_SCAFLD  NZ_JBRWOL010000001-NZ_JBRWOL010000100
//
LOCUS       NZ_JBRWON010000000   5690540 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain PEKP2024, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWON000000000
VERSION     NZ_JBRWON000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385080
            Assembly: GCF_056162425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5690540)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5690540)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWON000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBRWON000000000.  This version of the
            project (01) has the accession number NZ_JBRWON010000000, and
            consists of sequences JBRWON010000001-JBRWON010000132.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162425.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:29:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,777
            CDSs (total)                      :: 5,694
            Genes (coding)                    :: 5,520
            CDSs (with protein)               :: 5,520
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 174
            CDSs (without protein)            :: 174
            Pseudo Genes (ambiguous residues) :: 0 of 174
            Pseudo Genes (frameshifted)       :: 54 of 174
            Pseudo Genes (incomplete)         :: 122 of 174
            Pseudo Genes (internal stop)      :: 23 of 174
            Pseudo Genes (multiple problems)  :: 20 of 174
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5690540
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="PEKP2024"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China"
                     /lat_lon="39.982734 N 116.360012 E"
                     /collection_date="2021-02-23"
                     /collected_by="Ping Yang"
                     /genotype="ST11"
WGS         JBRWON010000001-JBRWON010000132
WGS_SCAFLD  NZ_JBRWON010000001-NZ_JBRWON010000132
//
LOCUS       NZ_CAFM01000000      3474000 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Legionella pneumophila 130b, whole genome shotgun sequencing
            project.
ACCESSION   NZ_CAFM00000000
VERSION     NZ_CAFM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA2272454
            Assembly: GCF_000211115.1
KEYWORDS    WGS; RefSeq.
SOURCE      Legionella pneumophila 130b
  ORGANISM  Legionella pneumophila 130b
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1
  AUTHORS   Schroeder,G.N., Petty,N.K., Mousnier,A., Harding,C.R., Vogrin,A.J.,
            Wee,B., Fry,N.K., Harrison,T.G., Newton,H.J., Thomson,N.R.,
            Beatson,S.A., Dougan,G., Hartland,E.L. and Frankel,G.
  TITLE     Legionella pneumophila strain 130b possesses a unique combination
            of type IV secretion systems and novel Dot/Icm secretion system
            effector proteins
  JOURNAL   J Bacteriol 192 (22), 6001-6016 (2010)
   PUBMED   20833813
REFERENCE   2  (bases 1 to 3474000)
  AUTHORS   Wee,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-AUG-2010) to the INSDC. Wee B., School of Chemistry
            and Molecular Bioscience, University of Queensland, Bldg 76, UQ,
            St. Lucia, 4072, AUSTRALIA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAFM00000000.1.
            The Legionella pneumophila 130b whole genome shotgun (WGS) project
            has the project accession NZ_CAFM00000000.  This version of the
            project (01) has the accession number NZ_CAFM01000000, and consists
            of sequences CAFM01000001-CAFM01000159.
            Data release policy http://www.sanger.ac.uk/legal/#t_2 WGS set of
            entries linked with entry FR687201.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000211115.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:53:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,216
            CDSs (total)                      :: 3,167
            Genes (coding)                    :: 3,021
            CDSs (with protein)               :: 3,021
            Genes (RNA)                       :: 49
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 146
            CDSs (without protein)            :: 146
            Pseudo Genes (ambiguous residues) :: 0 of 146
            Pseudo Genes (frameshifted)       :: 92 of 146
            Pseudo Genes (incomplete)         :: 55 of 146
            Pseudo Genes (internal stop)      :: 6 of 146
            Pseudo Genes (multiple problems)  :: 7 of 146
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3474000
                     /organism="Legionella pneumophila 130b"
                     /mol_type="genomic DNA"
                     /strain="130b"
                     /db_xref="taxon:866628"
WGS         CAFM01000001-CAFM01000159
WGS_SCAFLD  NZ_CAFM01000001-NZ_CAFM01000159
//
LOCUS       NZ_LNYT01000000      3128807 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Legionella rubrilucens strain WA-270A-C2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LNYT00000000
VERSION     NZ_LNYT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04274791
            Assembly: GCF_001468125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Legionella rubrilucens
  ORGANISM  Legionella rubrilucens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1  (bases 1 to 3128807)
  AUTHORS   Burstein,D., Amaro,F., Zusman,T., Lifshitz,Z., Cohen,O.,
            Gilbert,J.A., Pupko,T., Shuman,H.A. and Segal,G.
  TITLE     Genomic analysis of 38 Legionella species identifies large and
            diverse effector repertoires
  JOURNAL   Nat Genet 48 (2), 167-175 (2016)
   PUBMED   26752266
REFERENCE   2  (bases 1 to 3128807)
  AUTHORS   Burstein,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2015) Cell Research and Immunology, Tel Aviv
            University, Tel Aviv 69978, Israel
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LNYT00000000.1.
            The Legionella rubrilucens whole genome shotgun (WGS) project has
            the project accession NZ_LNYT00000000.  This version of the project
            (01) has the accession number NZ_LNYT01000000, and consists of
            sequences LNYT01000001-LNYT01000022.
            Annotated using prokka 1.11.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.2.10
            Genome Coverage       :: 1211x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001468125.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:45:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,949
            CDSs (total)                      :: 2,899
            Genes (coding)                    :: 2,874
            CDSs (with protein)               :: 2,874
            Genes (RNA)                       :: 50
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 25
            CDSs (without protein)            :: 25
            Pseudo Genes (ambiguous residues) :: 0 of 25
            Pseudo Genes (frameshifted)       :: 6 of 25
            Pseudo Genes (incomplete)         :: 18 of 25
            Pseudo Genes (internal stop)      :: 2 of 25
            Pseudo Genes (multiple problems)  :: 1 of 25
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3128807
                     /organism="Legionella rubrilucens"
                     /mol_type="genomic DNA"
                     /strain="WA-270A-C2"
                     /isolation_source="Tap water"
                     /culture_collection="ATCC:35304"
                     /type_material="type strain of Legionella rubrilucens"
                     /db_xref="taxon:458"
                     /geo_loc_name="USA: Los Angeles, California"
                     /collection_date="1980"
                     /collected_by="Gorman G. W."
WGS         LNYT01000001-LNYT01000022
WGS_SCAFLD  NZ_LNYT01000001-NZ_LNYT01000022
//
LOCUS       NZ_LNYP01000000      2667107 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Legionella oakridgensis strain Oak Ridge-10, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LNYP00000000
VERSION     NZ_LNYP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04274787
            Assembly: GCF_001467925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Legionella oakridgensis
  ORGANISM  Legionella oakridgensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1  (bases 1 to 2667107)
  AUTHORS   Burstein,D., Amaro,F., Zusman,T., Lifshitz,Z., Cohen,O.,
            Gilbert,J.A., Pupko,T., Shuman,H.A. and Segal,G.
  TITLE     Genomic analysis of 38 Legionella species identifies large and
            diverse effector repertoires
  JOURNAL   Nat Genet 48 (2), 167-175 (2016)
   PUBMED   26752266
REFERENCE   2  (bases 1 to 2667107)
  AUTHORS   Burstein,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2015) Cell Research and Immunology, Tel Aviv
            University, Tel Aviv 69978, Israel
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LNYP00000000.1.
            The Legionella oakridgensis whole genome shotgun (WGS) project has
            the project accession NZ_LNYP00000000.  This version of the project
            (01) has the accession number NZ_LNYP01000000, and consists of
            sequences LNYP01000001-LNYP01000031.
            Annotated using prokka 1.11.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.2.10
            Genome Coverage       :: 749x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001467925.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:46:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,544
            CDSs (total)                      :: 2,492
            Genes (coding)                    :: 2,456
            CDSs (with protein)               :: 2,456
            Genes (RNA)                       :: 52
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 4 of 36
            Pseudo Genes (incomplete)         :: 32 of 36
            Pseudo Genes (internal stop)      :: 2 of 36
            Pseudo Genes (multiple problems)  :: 2 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2667107
                     /organism="Legionella oakridgensis"
                     /mol_type="genomic DNA"
                     /strain="Oak Ridge-10"
                     /isolation_source="Industrial cooling tower"
                     /culture_collection="ATCC:33761"
                     /type_material="type strain of Legionella oakridgensis"
                     /db_xref="taxon:29423"
                     /geo_loc_name="USA: Pennsylvania"
                     /collection_date="1981"
                     /collected_by="Tyndall R. L."
WGS         LNYP01000001-LNYP01000031
WGS_SCAFLD  NZ_LNYP01000001-NZ_LNYP01000031
//
LOCUS       NZ_LNYF01000000      3582208 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Legionella hackeliae strain 798-PA-H, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LNYF00000000
VERSION     NZ_LNYF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04274777
            Assembly: GCF_001467705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Legionella hackeliae
  ORGANISM  Legionella hackeliae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1  (bases 1 to 3582208)
  AUTHORS   Burstein,D., Amaro,F., Zusman,T., Lifshitz,Z., Cohen,O.,
            Gilbert,J.A., Pupko,T., Shuman,H.A. and Segal,G.
  TITLE     Genomic analysis of 38 Legionella species identifies large and
            diverse effector repertoires
  JOURNAL   Nat Genet 48 (2), 167-175 (2016)
   PUBMED   26752266
REFERENCE   2  (bases 1 to 3582208)
  AUTHORS   Burstein,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2015) Cell Research and Immunology, Tel Aviv
            University, Tel Aviv 69978, Israel
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LNYF00000000.1.
            The Legionella hackeliae whole genome shotgun (WGS) project has the
            project accession NZ_LNYF00000000.  This version of the project
            (01) has the accession number NZ_LNYF01000000, and consists of
            sequences LNYF01000001-LNYF01000027.
            Annotated using prokka 1.11.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.2.10
            Genome Coverage       :: 510x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001467705.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:53:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,277
            CDSs (total)                      :: 3,227
            Genes (coding)                    :: 3,184
            CDSs (with protein)               :: 3,184
            Genes (RNA)                       :: 50
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 16 of 43
            Pseudo Genes (incomplete)         :: 29 of 43
            Pseudo Genes (internal stop)      :: 14 of 43
            Pseudo Genes (multiple problems)  :: 13 of 43
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3582208
                     /organism="Legionella hackeliae"
                     /mol_type="genomic DNA"
                     /strain="798-PA-H"
                     /isolation_source="Human lung aspirate"
                     /host="Homo sapiens"
                     /culture_collection="ATCC:35999"
                     /db_xref="taxon:449"
                     /geo_loc_name="USA: Pennsylvania"
                     /collection_date="1982"
                     /collected_by="Wing E."
WGS         LNYF01000001-LNYF01000027
WGS_SCAFLD  NZ_LNYF01000001-NZ_LNYF01000027
//
LOCUS       NZ_LNYU01000000      4818052 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Legionella santicrucis strain SC-63-C7, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LNYU00000000
VERSION     NZ_LNYU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04274793
            Assembly: GCF_001468135.1
KEYWORDS    WGS; RefSeq.
SOURCE      Legionella santicrucis
  ORGANISM  Legionella santicrucis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1  (bases 1 to 4818052)
  AUTHORS   Burstein,D., Amaro,F., Zusman,T., Lifshitz,Z., Cohen,O.,
            Gilbert,J.A., Pupko,T., Shuman,H.A. and Segal,G.
  TITLE     Genomic analysis of 38 Legionella species identifies large and
            diverse effector repertoires
  JOURNAL   Nat Genet 48 (2), 167-175 (2016)
   PUBMED   26752266
REFERENCE   2  (bases 1 to 4818052)
  AUTHORS   Burstein,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2015) Cell Research and Immunology, Tel Aviv
            University, Tel Aviv 69978, Israel
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LNYU00000000.1.
            The Legionella santicrucis whole genome shotgun (WGS) project has
            the project accession NZ_LNYU00000000.  This version of the project
            (01) has the accession number NZ_LNYU01000000, and consists of
            sequences LNYU01000001-LNYU01000092.
            Annotated using prokka 1.11.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.2.10
            Genome Coverage       :: 687x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001468135.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:52:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,353
            CDSs (total)                      :: 4,302
            Genes (coding)                    :: 4,202
            CDSs (with protein)               :: 4,202
            Genes (RNA)                       :: 51
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 29 of 100
            Pseudo Genes (incomplete)         :: 82 of 100
            Pseudo Genes (internal stop)      :: 16 of 100
            Pseudo Genes (multiple problems)  :: 22 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4818052
                     /organism="Legionella santicrucis"
                     /mol_type="genomic DNA"
                     /strain="SC-63-C7"
                     /isolation_source="Tap water"
                     /culture_collection="ATCC:35301"
                     /type_material="type strain of Legionella santicrucis"
                     /db_xref="taxon:45074"
                     /geo_loc_name="Virgin Islands: St. Croix"
                     /collection_date="1982"
                     /collected_by="Gorman G. W."
WGS         LNYU01000001-LNYU01000092
WGS_SCAFLD  NZ_LNYU01000001-NZ_LNYU01000092
//
LOCUS       NZ_LNYK01000000      2400013 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Legionella londiniensis strain ATCC 49505, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LNYK00000000
VERSION     NZ_LNYK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04274782
            Assembly: GCF_001467825.1
KEYWORDS    WGS; RefSeq.
SOURCE      Legionella londiniensis
  ORGANISM  Legionella londiniensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1  (bases 1 to 2400013)
  AUTHORS   Burstein,D., Amaro,F., Zusman,T., Lifshitz,Z., Cohen,O.,
            Gilbert,J.A., Pupko,T., Shuman,H.A. and Segal,G.
  TITLE     Genomic analysis of 38 Legionella species identifies large and
            diverse effector repertoires
  JOURNAL   Nat Genet 48 (2), 167-175 (2016)
   PUBMED   26752266
REFERENCE   2  (bases 1 to 2400013)
  AUTHORS   Burstein,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2015) Cell Research and Immunology, Tel Aviv
            University, Tel Aviv 69978, Israel
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LNYK00000000.1.
            The Legionella londiniensis whole genome shotgun (WGS) project has
            the project accession NZ_LNYK00000000.  This version of the project
            (01) has the accession number NZ_LNYK01000000, and consists of
            sequences LNYK01000001-LNYK01000034.
            Annotated using prokka 1.11.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.2.10
            Genome Coverage       :: 697x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001467825.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:47:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,244
            CDSs (total)                      :: 2,196
            Genes (coding)                    :: 2,152
            CDSs (with protein)               :: 2,152
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 44
            CDSs (without protein)            :: 44
            Pseudo Genes (ambiguous residues) :: 0 of 44
            Pseudo Genes (frameshifted)       :: 9 of 44
            Pseudo Genes (incomplete)         :: 35 of 44
            Pseudo Genes (internal stop)      :: 3 of 44
            Pseudo Genes (multiple problems)  :: 3 of 44
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2400013
                     /organism="Legionella londiniensis"
                     /mol_type="genomic DNA"
                     /strain="ATCC 49505"
                     /isolation_source="Office building cooling tower"
                     /culture_collection="ATCC:49505"
                     /type_material="type strain of Legionella londiniensis"
                     /db_xref="taxon:45068"
                     /geo_loc_name="United Kingdom: London"
                     /collected_by="Thacker W. L."
WGS         LNYK01000001-LNYK01000034
WGS_SCAFLD  NZ_LNYK01000001-NZ_LNYK01000034
//
LOCUS       NZ_LNYQ01000000      4169260 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Legionella parisiensis strain PF-209-C-C2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LNYQ00000000
VERSION     NZ_LNYQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04274788
            Assembly: GCF_001467945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Legionella parisiensis
  ORGANISM  Legionella parisiensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1  (bases 1 to 4169260)
  AUTHORS   Burstein,D., Amaro,F., Zusman,T., Lifshitz,Z., Cohen,O.,
            Gilbert,J.A., Pupko,T., Shuman,H.A. and Segal,G.
  TITLE     Genomic analysis of 38 Legionella species identifies large and
            diverse effector repertoires
  JOURNAL   Nat Genet 48 (2), 167-175 (2016)
   PUBMED   26752266
REFERENCE   2  (bases 1 to 4169260)
  AUTHORS   Burstein,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2015) Cell Research and Immunology, Tel Aviv
            University, Tel Aviv 69978, Israel
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LNYQ00000000.1.
            The Legionella parisiensis whole genome shotgun (WGS) project has
            the project accession NZ_LNYQ00000000.  This version of the project
            (01) has the accession number NZ_LNYQ01000000, and consists of
            sequences LNYQ01000001-LNYQ01000013.
            Annotated using prokka 1.11.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.2.10
            Genome Coverage       :: 1045x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001467945.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:56:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,726
            CDSs (total)                      :: 3,674
            Genes (coding)                    :: 3,625
            CDSs (with protein)               :: 3,625
            Genes (RNA)                       :: 52
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 42
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 14 of 49
            Pseudo Genes (incomplete)         :: 42 of 49
            Pseudo Genes (internal stop)      :: 6 of 49
            Pseudo Genes (multiple problems)  :: 11 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4169260
                     /organism="Legionella parisiensis"
                     /mol_type="genomic DNA"
                     /strain="PF-209-C-C2"
                     /isolation_source="Water in cooling tower"
                     /culture_collection="ATCC:35299"
                     /type_material="type strain of Legionella parisiensis"
                     /db_xref="taxon:45071"
                     /geo_loc_name="France: Paris"
                     /collection_date="1981"
                     /collected_by="Gorman G. W."
WGS         LNYQ01000001-LNYQ01000013
WGS_SCAFLD  NZ_LNYQ01000001-NZ_LNYQ01000013
//
LOCUS       NZ_JBJLMU010000000   5755717 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 756694, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLMU000000000
VERSION     NZ_JBJLMU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061656
            Assembly: GCF_045569895.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5755717)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5755717)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLMU000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLMU000000000.  This version of the
            project (01) has the accession number NZ_JBJLMU010000000, and
            consists of sequences JBJLMU010000001-JBJLMU010000073.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.61
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045569895.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:29:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,681
            CDSs (total)                      :: 5,593
            Genes (coding)                    :: 5,476
            CDSs (with protein)               :: 5,476
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 1, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 4 (23S)
            tRNAs                             :: 74
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 117
            CDSs (without protein)            :: 117
            Pseudo Genes (ambiguous residues) :: 0 of 117
            Pseudo Genes (frameshifted)       :: 52 of 117
            Pseudo Genes (incomplete)         :: 67 of 117
            Pseudo Genes (internal stop)      :: 19 of 117
            Pseudo Genes (multiple problems)  :: 17 of 117
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5755717
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="756694"
                     /isolation_source="RECTAL SWAB"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2022-08-31"
                     /collected_by="HUMS"
WGS         JBJLMU010000001-JBJLMU010000073
WGS_SCAFLD  NZ_JBJLMU010000001-NZ_JBJLMU010000073
//
LOCUS       NZ_JBJLMD010000000   5850336 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 927280, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLMD000000000
VERSION     NZ_JBJLMD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061673
            Assembly: GCF_045566875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5850336)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5850336)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLMD000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLMD000000000.  This version of the
            project (01) has the accession number NZ_JBJLMD010000000, and
            consists of sequences JBJLMD010000001-JBJLMD010000091.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.78
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045566875.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:22:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,848
            CDSs (total)                      :: 5,752
            Genes (coding)                    :: 5,616
            CDSs (with protein)               :: 5,616
            Genes (RNA)                       :: 96
            rRNAs                             :: 1, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 2 (16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 136
            CDSs (without protein)            :: 136
            Pseudo Genes (ambiguous residues) :: 0 of 136
            Pseudo Genes (frameshifted)       :: 57 of 136
            Pseudo Genes (incomplete)         :: 79 of 136
            Pseudo Genes (internal stop)      :: 25 of 136
            Pseudo Genes (multiple problems)  :: 19 of 136
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5850336
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="927280"
                     /isolation_source="RECTAL SWAB"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-04-30"
                     /collected_by="HUMS"
WGS         JBJLMD010000001-JBJLMD010000091
WGS_SCAFLD  NZ_JBJLMD010000001-NZ_JBJLMD010000091
//
LOCUS       NZ_JBJLMZ010000000   5834811 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 676998, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLMZ000000000
VERSION     NZ_JBJLMZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061651
            Assembly: GCF_045570155.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5834811)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5834811)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLMZ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLMZ000000000.  This version of the
            project (01) has the accession number NZ_JBJLMZ010000000, and
            consists of sequences JBJLMZ010000001-JBJLMZ010000153.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.56
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045570155.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:29:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,822
            CDSs (total)                      :: 5,719
            Genes (coding)                    :: 5,586
            CDSs (with protein)               :: 5,586
            Genes (RNA)                       :: 103
            rRNAs                             :: 1, 2, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 5 (16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 54 of 133
            Pseudo Genes (incomplete)         :: 84 of 133
            Pseudo Genes (internal stop)      :: 16 of 133
            Pseudo Genes (multiple problems)  :: 19 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5834811
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="676998"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2022-05-09"
                     /collected_by="HUMS"
WGS         JBJLMZ010000001-JBJLMZ010000153
WGS_SCAFLD  NZ_JBJLMZ010000001-NZ_JBJLMZ010000153
//
LOCUS       NZ_JBJLLW010000000   5815291 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 944575, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLLW000000000
VERSION     NZ_JBJLLW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061680
            Assembly: GCF_045566935.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5815291)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5815291)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLLW000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLLW000000000.  This version of the
            project (01) has the accession number NZ_JBJLLW010000000, and
            consists of sequences JBJLLW010000001-JBJLLW010000128.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.85
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045566935.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:42:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,767
            CDSs (total)                      :: 5,673
            Genes (coding)                    :: 5,538
            CDSs (with protein)               :: 5,538
            Genes (RNA)                       :: 94
            rRNAs                             :: 1, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 4, 4 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 135
            CDSs (without protein)            :: 135
            Pseudo Genes (ambiguous residues) :: 0 of 135
            Pseudo Genes (frameshifted)       :: 61 of 135
            Pseudo Genes (incomplete)         :: 78 of 135
            Pseudo Genes (internal stop)      :: 24 of 135
            Pseudo Genes (multiple problems)  :: 24 of 135
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5815291
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="944575"
                     /isolation_source="RECTAL SWAB"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-05-25"
                     /collected_by="HUMS"
WGS         JBJLLW010000001-JBJLLW010000128
WGS_SCAFLD  NZ_JBJLLW010000001-NZ_JBJLLW010000128
//
LOCUS       NZ_JBIGQZ010000000   5843391 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E137, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGQZ000000000
VERSION     NZ_JBIGQZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130487
            Assembly: GCF_045574425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5843391)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGQZ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGQZ000000000.  This version of the
            project (01) has the accession number NZ_JBIGQZ010000000, and
            consists of sequences JBIGQZ010000001-JBIGQZ010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 157x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045574425.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:51:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,850
            CDSs (total)                      :: 5,729
            Genes (coding)                    :: 5,568
            CDSs (with protein)               :: 5,568
            Genes (RNA)                       :: 121
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 161
            CDSs (without protein)            :: 161
            Pseudo Genes (ambiguous residues) :: 0 of 161
            Pseudo Genes (frameshifted)       :: 72 of 161
            Pseudo Genes (incomplete)         :: 90 of 161
            Pseudo Genes (internal stop)      :: 22 of 161
            Pseudo Genes (multiple problems)  :: 19 of 161
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5843391
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E137"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGQZ010000001-JBIGQZ010000004
WGS_SCAFLD  NZ_JBIGQZ010000001-NZ_JBIGQZ010000004
//
LOCUS       NZ_JBSAXJ010000000   4431499 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Leclercia pneumoniae strain D5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSAXJ000000000
VERSION     NZ_JBSAXJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50273549
            Assembly: GCF_056156725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Leclercia pneumoniae
  ORGANISM  Leclercia pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Leclercia.
REFERENCE   1  (bases 1 to 4431499)
  AUTHORS   Knecht,C.A., Prack Mccormick,B., Alvarez,V.E., Buzzola,F.,
            Fuchs,J., Salgado,P., Campos,J., Quiroga,M.P. and Centron,D.
  TITLE     The use of glyphosate in agriculture contributes to the rise of
            species causing multidrug hospital-acquired infections
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4431499)
  AUTHORS   Knecht,C.A., Campos,J., Alvarez,V.E., Quiroga,M.P. and Centron,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JUL-2025) Institute of Research in Medical
            Microbiology and Parasitology, Universidad de Buenos Aires,
            CONICET, Paraguay 2155, Buenos Aires 1121, Argentina
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSAXJ000000000.1.
            The Leclercia pneumoniae whole genome shotgun (WGS) project has the
            project accession NZ_JBSAXJ000000000.  This version of the project
            (01) has the accession number NZ_JBSAXJ010000000, and consists of
            sequences JBSAXJ010000001-JBSAXJ010000014.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 379x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056156725.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:20:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,256
            CDSs (total)                      :: 4,169
            Genes (coding)                    :: 4,136
            CDSs (with protein)               :: 4,136
            Genes (RNA)                       :: 87
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 72
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 33
            CDSs (without protein)            :: 33
            Pseudo Genes (ambiguous residues) :: 0 of 33
            Pseudo Genes (frameshifted)       :: 12 of 33
            Pseudo Genes (incomplete)         :: 26 of 33
            Pseudo Genes (internal stop)      :: 2 of 33
            Pseudo Genes (multiple problems)  :: 7 of 33
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4431499
                     /organism="Leclercia pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="D5"
                     /isolation_source="sediment"
                     /db_xref="taxon:2815358"
                     /geo_loc_name="Argentina: Ramsar site at the Parana Delta"
                     /lat_lon="34.2228988 S 58.8975770 W"
                     /collection_date="2018-11"
WGS         JBSAXJ010000001-JBSAXJ010000014
WGS_SCAFLD  NZ_JBSAXJ010000001-NZ_JBSAXJ010000014
//
LOCUS       NZ_JBJLMQ010000000   5471324 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 838840, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLMQ000000000
VERSION     NZ_JBJLMQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061660
            Assembly: GCF_045570015.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5471324)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5471324)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLMQ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLMQ000000000.  This version of the
            project (01) has the accession number NZ_JBJLMQ010000000, and
            consists of sequences JBJLMQ010000001-JBJLMQ010000059.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.65
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045570015.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:22:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,402
            CDSs (total)                      :: 5,308
            Genes (coding)                    :: 5,180
            CDSs (with protein)               :: 5,180
            Genes (RNA)                       :: 94
            rRNAs                             :: 1, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 3 (16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 62 of 128
            Pseudo Genes (incomplete)         :: 72 of 128
            Pseudo Genes (internal stop)      :: 16 of 128
            Pseudo Genes (multiple problems)  :: 19 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5471324
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="838840"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2022-12-23"
                     /collected_by="HUMS"
WGS         JBJLMQ010000001-JBJLMQ010000059
WGS_SCAFLD  NZ_JBJLMQ010000001-NZ_JBJLMQ010000059
//
LOCUS       NZ_JBIGTB010000000   5458103 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E52, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGTB000000000
VERSION     NZ_JBIGTB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130411
            Assembly: GCF_045575515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5458103)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGTB000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGTB000000000.  This version of the
            project (01) has the accession number NZ_JBIGTB010000000, and
            consists of sequences JBIGTB010000001-JBIGTB010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 464x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575515.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:52:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,356
            CDSs (total)                      :: 5,234
            Genes (coding)                    :: 5,133
            CDSs (with protein)               :: 5,133
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 101
            CDSs (without protein)            :: 101
            Pseudo Genes (ambiguous residues) :: 0 of 101
            Pseudo Genes (frameshifted)       :: 63 of 101
            Pseudo Genes (incomplete)         :: 43 of 101
            Pseudo Genes (internal stop)      :: 10 of 101
            Pseudo Genes (multiple problems)  :: 13 of 101
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5458103
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E52"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGTB010000001-JBIGTB010000005
WGS_SCAFLD  NZ_JBIGTB010000001-NZ_JBIGTB010000005
//
LOCUS       NZ_JBRWZS010000000   5077549 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Leclercia adecarboxylata strain MEI40O-22, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWZS000000000
VERSION     NZ_JBRWZS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50713141
            Assembly: GCF_056155235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Leclercia adecarboxylata
  ORGANISM  Leclercia adecarboxylata
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Leclercia.
REFERENCE   1  (bases 1 to 5077549)
  AUTHORS   Spahr,Y., Collaud,A. and Perreten,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2025) Institute of Veterinary Bacteriology,
            University of Bern, Laenggassstrasse 122, Bern 3012, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWZS000000000.1.
            The Leclercia adecarboxylata whole genome shotgun (WGS) project has
            the project accession NZ_JBRWZS000000000.  This version of the
            project (01) has the accession number NZ_JBRWZS010000000, and
            consists of sequences JBRWZS010000001-JBRWZS010000003.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Autocycler v. 0.5.2; Polypolish v. 0.6.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 283.29011044502x
            Sequencing Technology  :: Oxford Nanopore MinION; Illumina NovaSeq
                                      6000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155235.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:26:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,869
            CDSs (total)                      :: 4,746
            Genes (coding)                    :: 4,678
            CDSs (with protein)               :: 4,678
            Genes (RNA)                       :: 123
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 31 of 68
            Pseudo Genes (incomplete)         :: 42 of 68
            Pseudo Genes (internal stop)      :: 16 of 68
            Pseudo Genes (multiple problems)  :: 17 of 68
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5077549
                     /organism="Leclercia adecarboxylata"
                     /mol_type="genomic DNA"
                     /strain="MEI40O-22"
                     /isolation_source="Soil surface"
                     /db_xref="taxon:83655"
                     /geo_loc_name="Switzerland: Bern"
                     /collection_date="2022-06"
                     /collected_by="Veterinary staff"
WGS         JBRWZS010000001-JBRWZS010000003
WGS_SCAFLD  NZ_CM149558
WGS_SCAFLD  NZ_JBRWZS010000002-NZ_JBRWZS010000003
//
LOCUS       NZ_JBJLNK010000000   5525650 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 1030572, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLNK000000000
VERSION     NZ_JBJLNK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061640
            Assembly: GCF_045570295.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5525650)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5525650)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLNK000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLNK000000000.  This version of the
            project (01) has the accession number NZ_JBJLNK010000000, and
            consists of sequences JBJLNK010000001-JBJLNK010000134.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.45
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045570295.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:18:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,541
            CDSs (total)                      :: 5,454
            Genes (coding)                    :: 5,280
            CDSs (with protein)               :: 5,280
            Genes (RNA)                       :: 87
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 3 (16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 174
            CDSs (without protein)            :: 174
            Pseudo Genes (ambiguous residues) :: 0 of 174
            Pseudo Genes (frameshifted)       :: 74 of 174
            Pseudo Genes (incomplete)         :: 101 of 174
            Pseudo Genes (internal stop)      :: 39 of 174
            Pseudo Genes (multiple problems)  :: 34 of 174
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5525650
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="1030572"
                     /isolation_source="RECTAL SWAB"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-10-05"
                     /collected_by="HUMS"
WGS         JBJLNK010000001-JBJLNK010000134
WGS_SCAFLD  NZ_JBJLNK010000001-NZ_JBJLNK010000134
//
LOCUS       NZ_JBJLNI010000000   5525290 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 1088441, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLNI000000000
VERSION     NZ_JBJLNI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061642
            Assembly: GCF_045570375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5525290)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5525290)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLNI000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLNI000000000.  This version of the
            project (01) has the accession number NZ_JBJLNI010000000, and
            consists of sequences JBJLNI010000001-JBJLNI010000134.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.47
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045570375.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:23:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,442
            CDSs (total)                      :: 5,355
            Genes (coding)                    :: 5,195
            CDSs (with protein)               :: 5,195
            Genes (RNA)                       :: 87
            rRNAs                             :: 1, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 4 (16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 160
            CDSs (without protein)            :: 160
            Pseudo Genes (ambiguous residues) :: 0 of 160
            Pseudo Genes (frameshifted)       :: 66 of 160
            Pseudo Genes (incomplete)         :: 103 of 160
            Pseudo Genes (internal stop)      :: 29 of 160
            Pseudo Genes (multiple problems)  :: 32 of 160
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5525290
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="1088441"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-12-20"
                     /collected_by="HUMS"
WGS         JBJLNI010000001-JBJLNI010000134
WGS_SCAFLD  NZ_JBJLNI010000001-NZ_JBJLNI010000134
//
LOCUS       NZ_JBVNCW010000000   1582852 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Lancefieldella parvula strain TI19E08, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBVNCW000000000
VERSION     NZ_JBVNCW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN55948402
            Assembly: GCF_056162645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lancefieldella parvula
  ORGANISM  Lancefieldella parvula
            Bacteria; Bacillati; Actinomycetota; Coriobacteriia;
            Coriobacteriales; Atopobiaceae; Lancefieldella.
REFERENCE   1  (bases 1 to 1582852)
  AUTHORS   Yan,A. and Stintzi,A.
  TITLE     Relative abundance of gut-derived L. parvula strain is associated
            with severe inflammation in IBD
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1582852)
  AUTHORS   Weerasingha,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-FEB-2026) Department of Biochemistry, Microbiology
            and Immunology, University of Ottawa, 451 Smyth Rd, Ottawa, Ontario
            K1H 8L1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBVNCW000000000.1.
            The Lancefieldella parvula whole genome shotgun (WGS) project has
            the project accession NZ_JBVNCW000000000.  This version of the
            project (01) has the accession number NZ_JBVNCW010000000, and
            consists of sequence JBVNCW010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Alain stintzi lab (4135),
            451 Smyth Rd, Ottawa, ON, k1H8L1.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 25-FEB-2026
            Assembly Method        :: Flye v. 2.9.5-b1801
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 4433.0x
            Sequencing Technology  :: Oxford Nanopore MinION; IonTorrent
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162645.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:57:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,381
            CDSs (total)                      :: 1,327
            Genes (coding)                    :: 1,323
            CDSs (with protein)               :: 1,323
            Genes (RNA)                       :: 54
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 4
            CDSs (without protein)            :: 4
            Pseudo Genes (ambiguous residues) :: 0 of 4
            Pseudo Genes (frameshifted)       :: 3 of 4
            Pseudo Genes (incomplete)         :: 1 of 4
            Pseudo Genes (internal stop)      :: 0 of 4
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1582852
                     /organism="Lancefieldella parvula"
                     /mol_type="genomic DNA"
                     /strain="TI19E08"
                     /isolation_source="Colon aspirate"
                     /host="Homo sapiens"
                     /db_xref="taxon:1382"
                     /geo_loc_name="Canada"
                     /collection_date="2018-08-19"
                     /collected_by="Austin Yan"
WGS         JBVNCW010000001
WGS_SCAFLD  NZ_CM149606
//
LOCUS       NZ_CAMA01000000      2154766 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162
            strain type strain:CIP 110162, whole genome shotgun sequencing
            project.
ACCESSION   NZ_CAMA00000000
VERSION     NZ_CAMA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA2272084
            Assembly: GCF_000312645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162
  ORGANISM  Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1
  AUTHORS   Cousin,S., Loux,V., Ma,L., Creno,S., Clermont,D., Bizet,C. and
            Bouchier,C.
  TITLE     Draft Genome Sequences of Lactobacillus equicursoris CIP 110162T,
            isolated from thoroughbred racehorse feces and Lactobacillus sp.
            CRBIP 24.137 isolated from urine of human
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2154766)
  AUTHORS   Cousin,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-AUG-2012) PlateForme Genomique, Dpt Genomes et
            genetique, Institut Pasteur, 28 rue du Dr. Roux, Paris 75015,
            FRANCE
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAMA00000000.1.
            The Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162
            whole genome shotgun (WGS) project has the project accession
            NZ_CAMA00000000.  This version of the project (01) has the
            accession number NZ_CAMA01000000, and consists of sequences
            CAMA01000001-CAMA01000232.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000312645.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:21:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,203
            CDSs (total)                      :: 2,129
            Genes (coding)                    :: 2,052
            CDSs (with protein)               :: 2,052
            Genes (RNA)                       :: 74
            rRNAs                             :: 1, 4, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 4, 1 (16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 9 of 77
            Pseudo Genes (incomplete)         :: 67 of 77
            Pseudo Genes (internal stop)      :: 9 of 77
            Pseudo Genes (multiple problems)  :: 6 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2154766
                     /organism="Lactobacillus equicursoris DSM 19284 = JCM
                     14600 = CIP 110162"
                     /mol_type="genomic DNA"
                     /strain="type strain:CIP 110162"
                     /db_xref="taxon:1293597"
WGS         CAMA01000001-CAMA01000232
WGS_SCAFLD  NZ_CAMA01000001-NZ_CAMA01000232
//
LOCUS       NZ_JBJLNH010000000   5835693 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 1091362, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLNH000000000
VERSION     NZ_JBJLNH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061643
            Assembly: GCF_045570315.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5835693)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5835693)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLNH000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLNH000000000.  This version of the
            project (01) has the accession number NZ_JBJLNH010000000, and
            consists of sequences JBJLNH010000001-JBJLNH010000086.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.48
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045570315.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:16:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,823
            CDSs (total)                      :: 5,727
            Genes (coding)                    :: 5,593
            CDSs (with protein)               :: 5,593
            Genes (RNA)                       :: 96
            rRNAs                             :: 1, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 2 (16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 134
            CDSs (without protein)            :: 134
            Pseudo Genes (ambiguous residues) :: 0 of 134
            Pseudo Genes (frameshifted)       :: 55 of 134
            Pseudo Genes (incomplete)         :: 80 of 134
            Pseudo Genes (internal stop)      :: 25 of 134
            Pseudo Genes (multiple problems)  :: 20 of 134
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5835693
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="1091362"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-12-25"
                     /collected_by="HUMS"
WGS         JBJLNH010000001-JBJLNH010000086
WGS_SCAFLD  NZ_JBJLNH010000001-NZ_JBJLNH010000086
//
LOCUS       NZ_JBJLLR010000000   5743921 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 985068, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLLR000000000
VERSION     NZ_JBJLLR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061685
            Assembly: GCF_045566715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5743921)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5743921)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLLR000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLLR000000000.  This version of the
            project (01) has the accession number NZ_JBJLLR010000000, and
            consists of sequences JBJLLR010000001-JBJLLR010000127.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.90
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045566715.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:30:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,803
            CDSs (total)                      :: 5,707
            Genes (coding)                    :: 5,584
            CDSs (with protein)               :: 5,584
            Genes (RNA)                       :: 96
            rRNAs                             :: 1, 4, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 4, 3 (16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 51 of 123
            Pseudo Genes (incomplete)         :: 79 of 123
            Pseudo Genes (internal stop)      :: 15 of 123
            Pseudo Genes (multiple problems)  :: 18 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5743921
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="985068"
                     /isolation_source="SURGICAL WOUND"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-07-28"
                     /collected_by="HUMS"
WGS         JBJLLR010000001-JBJLLR010000127
WGS_SCAFLD  NZ_JBJLLR010000001-NZ_JBJLLR010000127
//
LOCUS       NZ_CANP01000000      4319733 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Legionella anisa str. Linanisette, whole genome shotgun sequencing
            project.
ACCESSION   NZ_CANP00000000
VERSION     NZ_CANP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA3138431
            Assembly: GCF_000333755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Legionella anisa str. Linanisette
  ORGANISM  Legionella anisa str. Linanisette
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1
  AUTHORS   Pagnier,I., Croce,O., Robert,C., Raoult,D. and La Scola,B.
  TITLE     Genome Sequence of Legionella anisa, Isolated from a Respiratory
            Sample, Using an Amoebal Coculture Procedure
  JOURNAL   Genome Announc 2 (1), e00031-14 (2014)
   PUBMED   24503989
  REMARK    Publication Status: Online-Only
REFERENCE   2
  AUTHORS   La Scola,B., Mezi,L., Weiller,P.J. and Raoult,D.
  TITLE     Isolation of Legionella anisa using an amoebic coculture procedure
  JOURNAL   J Clin Microbiol 39 (1), 365-366 (2001)
   PUBMED   11136802
REFERENCE   3  (bases 1 to 4319733)
  AUTHORS   GENOMES,U.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2012) Fac de Medecine, URMITE, 27 Bd J Moulin,
            13385 Marseille Cedex 05, FRANCE
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CANP00000000.1.
            The Legionella anisa str. Linanisette whole genome shotgun (WGS)
            project has the project accession NZ_CANP00000000.  This version of
            the project (01) has the accession number NZ_CANP01000000, and
            consists of sequences CANP01000001-CANP01000056.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000333755.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:22:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,922
            CDSs (total)                      :: 3,879
            Genes (coding)                    :: 3,797
            CDSs (with protein)               :: 3,797
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 36
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 39 of 82
            Pseudo Genes (incomplete)         :: 49 of 82
            Pseudo Genes (internal stop)      :: 2 of 82
            Pseudo Genes (multiple problems)  :: 8 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4319733
                     /organism="Legionella anisa str. Linanisette"
                     /mol_type="genomic DNA"
                     /strain="Linanisette"
                     /db_xref="taxon:1230343"
WGS         CANP01000001-CANP01000056
WGS_SCAFLD  NZ_CANP01000001-NZ_CANP01000056
//
LOCUS       NZ_JBJLMS010000000   5608094 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 822390, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLMS000000000
VERSION     NZ_JBJLMS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061658
            Assembly: GCF_045569995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5608094)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5608094)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLMS000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLMS000000000.  This version of the
            project (01) has the accession number NZ_JBJLMS010000000, and
            consists of sequences JBJLMS010000001-JBJLMS010000102.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.63
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045569995.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:23:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,588
            CDSs (total)                      :: 5,494
            Genes (coding)                    :: 5,375
            CDSs (with protein)               :: 5,375
            Genes (RNA)                       :: 94
            rRNAs                             :: 1, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 119
            CDSs (without protein)            :: 119
            Pseudo Genes (ambiguous residues) :: 0 of 119
            Pseudo Genes (frameshifted)       :: 49 of 119
            Pseudo Genes (incomplete)         :: 73 of 119
            Pseudo Genes (internal stop)      :: 18 of 119
            Pseudo Genes (multiple problems)  :: 16 of 119
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5608094
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="822390"
                     /isolation_source="RECTAL SWAB"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2022-12-01"
                     /collected_by="HUMS"
WGS         JBJLMS010000001-JBJLMS010000102
WGS_SCAFLD  NZ_JBJLMS010000001-NZ_JBJLMS010000102
//
LOCUS       NZ_JBIGMI010000000   5556340 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E328, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGMI000000000
VERSION     NZ_JBIGMI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130655
            Assembly: GCF_045571955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5556340)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGMI000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGMI000000000.  This version of the
            project (01) has the accession number NZ_JBIGMI010000000, and
            consists of sequences JBIGMI010000001-JBIGMI010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 234x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045571955.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:28:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,559
            CDSs (total)                      :: 5,434
            Genes (coding)                    :: 5,298
            CDSs (with protein)               :: 5,298
            Genes (RNA)                       :: 125
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 16
            Pseudo Genes (total)              :: 136
            CDSs (without protein)            :: 136
            Pseudo Genes (ambiguous residues) :: 0 of 136
            Pseudo Genes (frameshifted)       :: 79 of 136
            Pseudo Genes (incomplete)         :: 65 of 136
            Pseudo Genes (internal stop)      :: 12 of 136
            Pseudo Genes (multiple problems)  :: 18 of 136
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5556340
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E328"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGMI010000001-JBIGMI010000008
WGS_SCAFLD  NZ_JBIGMI010000001-NZ_JBIGMI010000008
//
LOCUS       NZ_CALZ01000000      2355793 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Lactobacillus equicursoris 66c, whole genome shotgun sequencing
            project.
ACCESSION   NZ_CALZ00000000
VERSION     NZ_CALZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA2272320
            Assembly: GCF_000312625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lactobacillus equicursoris 66c
  ORGANISM  Lactobacillus equicursoris 66c
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1
  AUTHORS   Cousin,S., Loux,V., Ma,L., Creno,S., Clermont,D., Bizet,C. and
            Bouchier,C.
  TITLE     Draft Genome Sequences of Lactobacillus equicursoris CIP 110162T,
            isolated from thoroughbred racehorse feces and Lactobacillus sp.
            CRBIP 24.137 isolated from urine of human
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2355793)
  AUTHORS   Cousin,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-AUG-2012) PlateForme Genomique, Dpt Genomes et
            genetique, Institut Pasteur, 28 rue du Dr. Roux, Paris 75015,
            FRANCE
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CALZ00000000.1.
            The Lactobacillus equicursoris 66c whole genome shotgun (WGS)
            project has the project accession NZ_CALZ00000000.  This version of
            the project (01) has the accession number NZ_CALZ01000000, and
            consists of sequences CALZ01000001-CALZ01000161.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000312625.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:22:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,313
            CDSs (total)                      :: 2,229
            Genes (coding)                    :: 2,160
            CDSs (with protein)               :: 2,160
            Genes (RNA)                       :: 84
            rRNAs                             :: 2, 5, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 15 of 69
            Pseudo Genes (incomplete)         :: 61 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 12 of 69
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2355793
                     /organism="Lactobacillus equicursoris 66c"
                     /mol_type="genomic DNA"
                     /strain="66c"
                     /db_xref="taxon:872326"
WGS         CALZ01000001-CALZ01000161
WGS_SCAFLD  NZ_CALZ01000001-NZ_CALZ01000161
//
LOCUS       NZ_JBJLNL010000000   5763946 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 1059745, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLNL000000000
VERSION     NZ_JBJLNL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061639
            Assembly: GCF_045570395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5763946)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5763946)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLNL000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLNL000000000.  This version of the
            project (01) has the accession number NZ_JBJLNL010000000, and
            consists of sequences JBJLNL010000001-JBJLNL010000099.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.44
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045570395.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:17:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,698
            CDSs (total)                      :: 5,602
            Genes (coding)                    :: 5,476
            CDSs (with protein)               :: 5,476
            Genes (RNA)                       :: 96
            rRNAs                             :: 1, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 4, 4 (16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 126
            CDSs (without protein)            :: 126
            Pseudo Genes (ambiguous residues) :: 0 of 126
            Pseudo Genes (frameshifted)       :: 59 of 126
            Pseudo Genes (incomplete)         :: 72 of 126
            Pseudo Genes (internal stop)      :: 22 of 126
            Pseudo Genes (multiple problems)  :: 22 of 126
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5763946
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="1059745"
                     /isolation_source="RECTAL SWAB"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-11-13"
                     /collected_by="HUMS"
WGS         JBJLNL010000001-JBJLNL010000099
WGS_SCAFLD  NZ_JBJLNL010000001-NZ_JBJLNL010000099
//
LOCUS       NZ_JBIGNI010000000   5764644 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E294, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGNI000000000
VERSION     NZ_JBIGNI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130624
            Assembly: GCF_045572465.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5764644)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGNI000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGNI000000000.  This version of the
            project (01) has the accession number NZ_JBIGNI010000000, and
            consists of sequences JBIGNI010000001-JBIGNI010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 331x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045572465.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:20:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,638
            CDSs (total)                      :: 5,516
            Genes (coding)                    :: 5,331
            CDSs (with protein)               :: 5,331
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 185
            CDSs (without protein)            :: 185
            Pseudo Genes (ambiguous residues) :: 0 of 185
            Pseudo Genes (frameshifted)       :: 97 of 185
            Pseudo Genes (incomplete)         :: 88 of 185
            Pseudo Genes (internal stop)      :: 24 of 185
            Pseudo Genes (multiple problems)  :: 21 of 185
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5764644
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E294"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGNI010000001-JBIGNI010000006
WGS_SCAFLD  NZ_JBIGNI010000001-NZ_JBIGNI010000006
//
LOCUS       NZ_JBIGRB010000000   5744985 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E135, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGRB000000000
VERSION     NZ_JBIGRB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130485
            Assembly: GCF_045574445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5744985)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGRB000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGRB000000000.  This version of the
            project (01) has the accession number NZ_JBIGRB010000000, and
            consists of sequences JBIGRB010000001-JBIGRB010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 487x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045574445.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:33:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,646
            CDSs (total)                      :: 5,523
            Genes (coding)                    :: 5,352
            CDSs (with protein)               :: 5,352
            Genes (RNA)                       :: 123
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 171
            CDSs (without protein)            :: 171
            Pseudo Genes (ambiguous residues) :: 0 of 171
            Pseudo Genes (frameshifted)       :: 95 of 171
            Pseudo Genes (incomplete)         :: 77 of 171
            Pseudo Genes (internal stop)      :: 25 of 171
            Pseudo Genes (multiple problems)  :: 21 of 171
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5744985
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E135"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGRB010000001-JBIGRB010000009
WGS_SCAFLD  NZ_JBIGRB010000001-NZ_JBIGRB010000009
//
LOCUS       NZ_JBIGRC010000000   5677648 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E134, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGRC000000000
VERSION     NZ_JBIGRC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130484
            Assembly: GCF_045574455.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5677648)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGRC000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGRC000000000.  This version of the
            project (01) has the accession number NZ_JBIGRC010000000, and
            consists of sequences JBIGRC010000001-JBIGRC010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 97x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045574455.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:46:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,597
            CDSs (total)                      :: 5,476
            Genes (coding)                    :: 5,250
            CDSs (with protein)               :: 5,250
            Genes (RNA)                       :: 121
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 226
            CDSs (without protein)            :: 226
            Pseudo Genes (ambiguous residues) :: 0 of 226
            Pseudo Genes (frameshifted)       :: 154 of 226
            Pseudo Genes (incomplete)         :: 78 of 226
            Pseudo Genes (internal stop)      :: 24 of 226
            Pseudo Genes (multiple problems)  :: 23 of 226
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5677648
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E134"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGRC010000001-JBIGRC010000007
WGS_SCAFLD  NZ_JBIGRC010000001-NZ_JBIGRC010000007
//
LOCUS       NZ_JTJV01000000      1944912 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Latilactobacillus curvatus strain NRIC0822, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JTJV00000000
VERSION     NZ_JTJV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03145063
            Assembly: GCF_000805355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Latilactobacillus curvatus
  ORGANISM  Latilactobacillus curvatus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Latilactobacillus.
REFERENCE   1  (bases 1 to 1944912)
  AUTHORS   Cousin,F.J., Lynch,S.M., Harris,H.M., McCann,A., Lynch,D.B.,
            Neville,B.A., Irisawa,T., Okada,S., Endo,A. and O'Toole,P.W.
  TITLE     Detection and genomic characterization of motility in Lactobacillus
            curvatus: confirmation of motility in a species outside the
            Lactobacillus salivarius clade
  JOURNAL   Appl Environ Microbiol 81 (4), 1297-1308 (2015)
   PUBMED   25501479
REFERENCE   2  (bases 1 to 1944912)
  AUTHORS   Harris,H.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2014) Microbiology, University College Cork,
            Western road, Cork, Munster 0000, Ireland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JTJV00000000.1.
            The Latilactobacillus curvatus whole genome shotgun (WGS) project
            has the project accession NZ_JTJV00000000.  This version of the
            project (01) has the accession number NZ_JTJV01000000, and consists
            of sequences JTJV01000001-JTJV01000144.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2012
            Assembly Method        :: Velvet v. 1.2.09
            Corresponding 16S rRNA :: KM676454.1
            Genome Coverage        :: 1396.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000805355.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:22:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,073
            CDSs (total)                      :: 2,010
            Genes (coding)                    :: 1,946
            CDSs (with protein)               :: 1,946
            Genes (RNA)                       :: 63
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 22 of 64
            Pseudo Genes (incomplete)         :: 32 of 64
            Pseudo Genes (internal stop)      :: 21 of 64
            Pseudo Genes (multiple problems)  :: 9 of 64
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1944912
                     /organism="Latilactobacillus curvatus"
                     /mol_type="genomic DNA"
                     /strain="NRIC0822"
                     /isolation_source="kaburazushi"
                     /db_xref="taxon:28038"
                     /geo_loc_name="Japan"
                     /collection_date="2005-01"
WGS         JTJV01000001-JTJV01000144
WGS_SCAFLD  NZ_JTJV01000001-NZ_JTJV01000144
//
LOCUS       NZ_JBIGRT010000000   5524824 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E100, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGRT000000000
VERSION     NZ_JBIGRT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130455
            Assembly: GCF_045574825.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5524824)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGRT000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGRT000000000.  This version of the
            project (01) has the accession number NZ_JBIGRT010000000, and
            consists of sequences JBIGRT010000001-JBIGRT010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 192x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045574825.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:49:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,480
            CDSs (total)                      :: 5,354
            Genes (coding)                    :: 5,146
            CDSs (with protein)               :: 5,146
            Genes (RNA)                       :: 126
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 90
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 208
            CDSs (without protein)            :: 208
            Pseudo Genes (ambiguous residues) :: 0 of 208
            Pseudo Genes (frameshifted)       :: 116 of 208
            Pseudo Genes (incomplete)         :: 104 of 208
            Pseudo Genes (internal stop)      :: 20 of 208
            Pseudo Genes (multiple problems)  :: 30 of 208
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5524824
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E100"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGRT010000001-JBIGRT010000005
WGS_SCAFLD  NZ_JBIGRT010000001-NZ_JBIGRT010000005
//
LOCUS       NZ_JBIGSA010000000   5717772 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E91, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGSA000000000
VERSION     NZ_JBIGSA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130446
            Assembly: GCF_045574985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5717772)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGSA000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGSA000000000.  This version of the
            project (01) has the accession number NZ_JBIGSA010000000, and
            consists of sequences JBIGSA010000001-JBIGSA010000010.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 78x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045574985.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:41:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,643
            CDSs (total)                      :: 5,541
            Genes (coding)                    :: 5,293
            CDSs (with protein)               :: 5,293
            Genes (RNA)                       :: 102
            rRNAs                             :: 6, 6, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 74
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 248
            CDSs (without protein)            :: 248
            Pseudo Genes (ambiguous residues) :: 0 of 248
            Pseudo Genes (frameshifted)       :: 180 of 248
            Pseudo Genes (incomplete)         :: 77 of 248
            Pseudo Genes (internal stop)      :: 34 of 248
            Pseudo Genes (multiple problems)  :: 38 of 248
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5717772
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E91"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGSA010000001-JBIGSA010000010
WGS_SCAFLD  NZ_JBIGSA010000001-NZ_JBIGSA010000010
//
LOCUS       NZ_JBIGRZ010000000   5619357 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E92, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGRZ000000000
VERSION     NZ_JBIGRZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130447
            Assembly: GCF_045574905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5619357)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGRZ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGRZ000000000.  This version of the
            project (01) has the accession number NZ_JBIGRZ010000000, and
            consists of sequences JBIGRZ010000001-JBIGRZ010000019.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 363x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045574905.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:37:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,536
            CDSs (total)                      :: 5,415
            Genes (coding)                    :: 5,254
            CDSs (with protein)               :: 5,254
            Genes (RNA)                       :: 121
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 161
            CDSs (without protein)            :: 161
            Pseudo Genes (ambiguous residues) :: 0 of 161
            Pseudo Genes (frameshifted)       :: 94 of 161
            Pseudo Genes (incomplete)         :: 76 of 161
            Pseudo Genes (internal stop)      :: 29 of 161
            Pseudo Genes (multiple problems)  :: 32 of 161
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5619357
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E92"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGRZ010000001-JBIGRZ010000019
WGS_SCAFLD  NZ_JBIGRZ010000001-NZ_JBIGRZ010000019
//
LOCUS       NZ_JPSU01000000      3312306 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Lactiplantibacillus plantarum strain FMNP01, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JPSU00000000
VERSION     NZ_JPSU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02947174
            Assembly: GCF_000764285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lactiplantibacillus plantarum
  ORGANISM  Lactiplantibacillus plantarum
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactiplantibacillus.
REFERENCE   1  (bases 1 to 3312306)
  AUTHORS   Li,X.F., Liao,X.Y., Liu,Y.F., Guo,L.Q., Ye,Z.W. and Lin,J.F.
  TITLE     Complete Genome Sequence of Probiotic Lactobacillus plantarum
            Strain FMNP01, Isolated from Mango Fruit
  JOURNAL   Genome Announc 2 (6), e01207-14 (2014)
   PUBMED   25428967
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3312306)
  AUTHORS   Lin,J.-F., Li,X.-F., Guo,L.-Q. and Liao,X.-Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-JUL-2014) Institute of Food Biotechnology, South
            China Agricultural University, Wu-shan Road No.483, Guangzhou,
            Guangdong 510640, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JPSU00000000.1.
            The Lactiplantibacillus plantarum whole genome shotgun (WGS)
            project has the project accession NZ_JPSU00000000.  This version of
            the project (01) has the accession number NZ_JPSU01000000, and
            consists of sequences JPSU01000001-JPSU01000018.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2014
            Assembly Method        :: SOAPdenovo v. 1.05
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 155.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000764285.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:21:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,152
            CDSs (total)                      :: 3,068
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 84
            rRNAs                             :: 5, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 4, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 45
            CDSs (without protein)            :: 45
            Pseudo Genes (ambiguous residues) :: 0 of 45
            Pseudo Genes (frameshifted)       :: 20 of 45
            Pseudo Genes (incomplete)         :: 12 of 45
            Pseudo Genes (internal stop)      :: 19 of 45
            Pseudo Genes (multiple problems)  :: 6 of 45
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3312306
                     /organism="Lactiplantibacillus plantarum"
                     /mol_type="genomic DNA"
                     /strain="FMNP01"
                     /isolation_source="Guangzhou mango"
                     /db_xref="taxon:1590"
                     /geo_loc_name="China:Guangzhou"
                     /collection_date="2013-08-23"
WGS         JPSU01000001-JPSU01000018
WGS_SCAFLD  NZ_JPSU01000015
WGS_SCAFLD  NZ_JPSU01000018
WGS_SCAFLD  NZ_KN234831-NZ_KN234832
//
LOCUS       NZ_JBIGSO010000000   5693888 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E72, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGSO000000000
VERSION     NZ_JBIGSO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130429
            Assembly: GCF_045575225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5693888)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGSO000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGSO000000000.  This version of the
            project (01) has the accession number NZ_JBIGSO010000000, and
            consists of sequences JBIGSO010000001-JBIGSO010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 389x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575225.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:49:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,602
            CDSs (total)                      :: 5,481
            Genes (coding)                    :: 5,323
            CDSs (with protein)               :: 5,323
            Genes (RNA)                       :: 121
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 158
            CDSs (without protein)            :: 158
            Pseudo Genes (ambiguous residues) :: 0 of 158
            Pseudo Genes (frameshifted)       :: 101 of 158
            Pseudo Genes (incomplete)         :: 58 of 158
            Pseudo Genes (internal stop)      :: 19 of 158
            Pseudo Genes (multiple problems)  :: 17 of 158
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5693888
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E72"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGSO010000001-JBIGSO010000004
WGS_SCAFLD  NZ_JBIGSO010000001-NZ_JBIGSO010000004
//
LOCUS       NZ_JBIGTJ010000000   5743177 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E34, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGTJ000000000
VERSION     NZ_JBIGTJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130400
            Assembly: GCF_045575635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5743177)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGTJ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGTJ000000000.  This version of the
            project (01) has the accession number NZ_JBIGTJ010000000, and
            consists of sequences JBIGTJ010000001-JBIGTJ010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 413x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575635.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:56:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,700
            CDSs (total)                      :: 5,576
            Genes (coding)                    :: 5,404
            CDSs (with protein)               :: 5,404
            Genes (RNA)                       :: 124
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 172
            CDSs (without protein)            :: 172
            Pseudo Genes (ambiguous residues) :: 0 of 172
            Pseudo Genes (frameshifted)       :: 92 of 172
            Pseudo Genes (incomplete)         :: 91 of 172
            Pseudo Genes (internal stop)      :: 18 of 172
            Pseudo Genes (multiple problems)  :: 26 of 172
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5743177
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E34"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGTJ010000001-JBIGTJ010000009
WGS_SCAFLD  NZ_JBIGTJ010000001-NZ_JBIGTJ010000009
//
LOCUS       NZ_LFEE01000000      2896305 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Lactiplantibacillus herbarum strain TCF032-E4, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LFEE00000000
VERSION     NZ_LFEE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03770836
            Assembly: GCF_001039045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lactiplantibacillus herbarum
  ORGANISM  Lactiplantibacillus herbarum
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactiplantibacillus.
REFERENCE   1  (bases 1 to 2896305)
  AUTHORS   Mao,Y., Chen,M. and Horvath,P.
  TITLE     Draft Genome Sequence of Lactobacillus sp. Strain TCF032-E4,
            Isolated from Fermented Radish
  JOURNAL   Genome Announc 3 (4), e00821-15 (2015)
   PUBMED   26227596
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2896305)
  AUTHORS   Mao,Y., Chen,M. and Horvath,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUN-2015) Nutrition & Health, Dupont, 10, Lane 280
            Linhong Rd, Shanghai, Shanghai 200335, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LFEE00000000.1.
            The Lactiplantibacillus herbarum whole genome shotgun (WGS) project
            has the project accession NZ_LFEE00000000.  This version of the
            project (01) has the accession number NZ_LFEE01000000, and consists
            of sequences LFEE01000001-LFEE01000055.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. 1.2.10
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 413.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001039045.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:37:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,847
            CDSs (total)                      :: 2,786
            Genes (coding)                    :: 2,715
            CDSs (with protein)               :: 2,715
            Genes (RNA)                       :: 61
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 42 of 71
            Pseudo Genes (incomplete)         :: 21 of 71
            Pseudo Genes (internal stop)      :: 9 of 71
            Pseudo Genes (multiple problems)  :: 1 of 71
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2896305
                     /organism="Lactiplantibacillus herbarum"
                     /mol_type="genomic DNA"
                     /strain="TCF032-E4"
                     /isolation_source="fermented radish"
                     /type_material="type strain of Lactobacillus herbarum"
                     /db_xref="taxon:1670446"
                     /geo_loc_name="China: Guangxi"
                     /collection_date="2013-03-18"
WGS         LFEE01000001-LFEE01000055
WGS_SCAFLD  NZ_LFEE01000001-NZ_LFEE01000055
//
LOCUS       NZ_JBIGTE010000000   5858584 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E45, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGTE000000000
VERSION     NZ_JBIGTE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130408
            Assembly: GCF_045575535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5858584)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGTE000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGTE000000000.  This version of the
            project (01) has the accession number NZ_JBIGTE010000000, and
            consists of sequences JBIGTE010000001-JBIGTE010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 307x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575535.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:55:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,743
            CDSs (total)                      :: 5,621
            Genes (coding)                    :: 5,432
            CDSs (with protein)               :: 5,432
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 189
            CDSs (without protein)            :: 189
            Pseudo Genes (ambiguous residues) :: 0 of 189
            Pseudo Genes (frameshifted)       :: 90 of 189
            Pseudo Genes (incomplete)         :: 103 of 189
            Pseudo Genes (internal stop)      :: 36 of 189
            Pseudo Genes (multiple problems)  :: 36 of 189
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5858584
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E45"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGTE010000001-JBIGTE010000005
WGS_SCAFLD  NZ_JBIGTE010000001-NZ_JBIGTE010000005
//
LOCUS       NZ_JBIGTI010000000   5693004 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E35, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGTI000000000
VERSION     NZ_JBIGTI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130401
            Assembly: GCF_045575655.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5693004)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGTI000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGTI000000000.  This version of the
            project (01) has the accession number NZ_JBIGTI010000000, and
            consists of sequences JBIGTI010000001-JBIGTI010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 303x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575655.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:55:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,589
            CDSs (total)                      :: 5,468
            Genes (coding)                    :: 5,283
            CDSs (with protein)               :: 5,283
            Genes (RNA)                       :: 121
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 185
            CDSs (without protein)            :: 185
            Pseudo Genes (ambiguous residues) :: 0 of 185
            Pseudo Genes (frameshifted)       :: 105 of 185
            Pseudo Genes (incomplete)         :: 89 of 185
            Pseudo Genes (internal stop)      :: 25 of 185
            Pseudo Genes (multiple problems)  :: 29 of 185
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5693004
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E35"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGTI010000001-JBIGTI010000005
WGS_SCAFLD  NZ_JBIGTI010000001-NZ_JBIGTI010000005
//
LOCUS       NZ_CBDBYG010000000   3367546 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Lactiplantibacillus plantarum isolate Lactobacillus plantarum
            VK-MK, whole genome shotgun sequencing project.
ACCESSION   NZ_CBDBYG000000000
VERSION     NZ_CBDBYG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117819813
            Assembly: GCF_965213325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lactiplantibacillus plantarum
  ORGANISM  Lactiplantibacillus plantarum
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactiplantibacillus.
REFERENCE   1  (bases 1 to 3367546)
  AUTHORS   Kisand,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAR-2025) University of Tartu, Institute of
            Technology, Environmental Microbiology, Nooruse 1, 50411, Estonia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBDBYG000000000.1.
            The Lactiplantibacillus plantarum whole genome shotgun (WGS)
            project has the project accession NZ_CBDBYG000000000.  This version
            of the project (01) has the accession number NZ_CBDBYG010000000,
            and consists of sequences CBDBYG010000001-CBDBYG010000072.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_965213325.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:41:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,267
            CDSs (total)                      :: 3,188
            Genes (coding)                    :: 3,150
            CDSs (with protein)               :: 3,150
            Genes (RNA)                       :: 79
            rRNAs                             :: 1, 2, 2 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 38
            CDSs (without protein)            :: 38
            Pseudo Genes (ambiguous residues) :: 0 of 38
            Pseudo Genes (frameshifted)       :: 9 of 38
            Pseudo Genes (incomplete)         :: 24 of 38
            Pseudo Genes (internal stop)      :: 11 of 38
            Pseudo Genes (multiple problems)  :: 5 of 38
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3367546
                     /organism="Lactiplantibacillus plantarum"
                     /mol_type="genomic DNA"
                     /isolate="Lactobacillus plantarum VK-MK"
                     /db_xref="taxon:1590"
                     /geo_loc_name="Estonia"
                     /collection_date="2017"
WGS         CBDBYG010000001-CBDBYG010000072
WGS_SCAFLD  NZ_CBDBYG010000001-NZ_CBDBYG010000072
//
LOCUS       NZ_JBIXAM010000000   5776374 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1188, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXAM000000000
VERSION     NZ_JBIXAM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247341
            Assembly: GCF_045619135.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5776374)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXAM000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXAM000000000.  This version of the
            project (01) has the accession number NZ_JBIXAM010000000, and
            consists of sequences JBIXAM010000001-JBIXAM010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 118x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045619135.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:42:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,711
            CDSs (total)                      :: 5,584
            Genes (coding)                    :: 5,388
            CDSs (with protein)               :: 5,388
            Genes (RNA)                       :: 127
            rRNAs                             :: 9, 9, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 9 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 196
            CDSs (without protein)            :: 196
            Pseudo Genes (ambiguous residues) :: 0 of 196
            Pseudo Genes (frameshifted)       :: 94 of 196
            Pseudo Genes (incomplete)         :: 109 of 196
            Pseudo Genes (internal stop)      :: 26 of 196
            Pseudo Genes (multiple problems)  :: 30 of 196
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5776374
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1188"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXAM010000001-JBIXAM010000008
WGS_SCAFLD  NZ_JBIXAM010000001-NZ_JBIXAM010000008
//
LOCUS       NZ_JBIXDK010000000   5738027 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1102, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXDK000000000
VERSION     NZ_JBIXDK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247265
            Assembly: GCF_045620665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5738027)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXDK000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXDK000000000.  This version of the
            project (01) has the accession number NZ_JBIXDK010000000, and
            consists of sequences JBIXDK010000001-JBIXDK010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 195x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045620665.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:49:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,622
            CDSs (total)                      :: 5,499
            Genes (coding)                    :: 5,329
            CDSs (with protein)               :: 5,329
            Genes (RNA)                       :: 123
            rRNAs                             :: 9, 8, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 9 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 170
            CDSs (without protein)            :: 170
            Pseudo Genes (ambiguous residues) :: 0 of 170
            Pseudo Genes (frameshifted)       :: 88 of 170
            Pseudo Genes (incomplete)         :: 89 of 170
            Pseudo Genes (internal stop)      :: 31 of 170
            Pseudo Genes (multiple problems)  :: 35 of 170
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5738027
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1102"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXDK010000001-JBIXDK010000008
WGS_SCAFLD  NZ_JBIXDK010000001-NZ_JBIXDK010000008
//
LOCUS       NZ_LNXW01000000      3971671 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Legionella cherrii strain ORW, whole genome shotgun sequencing
            project.
ACCESSION   NZ_LNXW00000000
VERSION     NZ_LNXW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04274768
            Assembly: GCF_001467035.1
KEYWORDS    WGS; RefSeq.
SOURCE      Legionella cherrii
  ORGANISM  Legionella cherrii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1  (bases 1 to 3971671)
  AUTHORS   Burstein,D., Amaro,F., Zusman,T., Lifshitz,Z., Cohen,O.,
            Gilbert,J.A., Pupko,T., Shuman,H.A. and Segal,G.
  TITLE     Genomic analysis of 38 Legionella species identifies large and
            diverse effector repertoires
  JOURNAL   Nat Genet 48 (2), 167-175 (2016)
   PUBMED   26752266
REFERENCE   2  (bases 1 to 3971671)
  AUTHORS   Burstein,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-NOV-2015) Cell Research and Immunology, Tel Aviv
            University, Tel Aviv 69978, Israel
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LNXW00000000.1.
            The Legionella cherrii whole genome shotgun (WGS) project has the
            project accession NZ_LNXW00000000.  This version of the project
            (01) has the accession number NZ_LNXW01000000, and consists of
            sequences LNXW01000001-LNXW01000014.
            Annotated using prokka 1.11.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.2.10
            Genome Coverage       :: 1419x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001467035.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:54:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,564
            CDSs (total)                      :: 3,514
            Genes (coding)                    :: 3,441
            CDSs (with protein)               :: 3,441
            Genes (RNA)                       :: 50
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 40
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 73
            CDSs (without protein)            :: 73
            Pseudo Genes (ambiguous residues) :: 0 of 73
            Pseudo Genes (frameshifted)       :: 12 of 73
            Pseudo Genes (incomplete)         :: 66 of 73
            Pseudo Genes (internal stop)      :: 1 of 73
            Pseudo Genes (multiple problems)  :: 5 of 73
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3971671
                     /organism="Legionella cherrii"
                     /mol_type="genomic DNA"
                     /strain="ORW"
                     /isolation_source="Thermally altered water"
                     /culture_collection="ATCC:35252"
                     /type_material="type strain of Legionella cherrii"
                     /db_xref="taxon:28084"
                     /geo_loc_name="USA: Minnesota"
                     /collection_date="1982"
                     /collected_by="Tyndall R. L."
WGS         LNXW01000001-LNXW01000014
WGS_SCAFLD  NZ_LNXW01000001-NZ_LNXW01000014
//
LOCUS       NZ_JBJLMV010000000   5416119 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 742302, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLMV000000000
VERSION     NZ_JBJLMV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061655
            Assembly: GCF_045569935.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5416119)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5416119)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLMV000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLMV000000000.  This version of the
            project (01) has the accession number NZ_JBJLMV010000000, and
            consists of sequences JBJLMV010000001-JBJLMV010000106.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.60
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045569935.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:26:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,301
            CDSs (total)                      :: 5,209
            Genes (coding)                    :: 5,096
            CDSs (with protein)               :: 5,096
            Genes (RNA)                       :: 92
            rRNAs                             :: 1, 4, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 4, 6 (16S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 113
            CDSs (without protein)            :: 113
            Pseudo Genes (ambiguous residues) :: 0 of 113
            Pseudo Genes (frameshifted)       :: 50 of 113
            Pseudo Genes (incomplete)         :: 68 of 113
            Pseudo Genes (internal stop)      :: 15 of 113
            Pseudo Genes (multiple problems)  :: 16 of 113
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5416119
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="742302"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2022-08-08"
                     /collected_by="HUMS"
WGS         JBJLMV010000001-JBJLMV010000106
WGS_SCAFLD  NZ_JBJLMV010000001-NZ_JBJLMV010000106
//
LOCUS       NZ_JAUMKH010000000   3432966 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Lactiplantibacillus plantarum strain GG9, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAUMKH000000000
VERSION     NZ_JAUMKH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN36465178
            Assembly: GCF_056172775.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lactiplantibacillus plantarum
  ORGANISM  Lactiplantibacillus plantarum
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactiplantibacillus.
REFERENCE   1  (bases 1 to 3432966)
  AUTHORS   Mukherjee,D. and Mandal,N.C.C.
  TITLE     Isolation of lactic acid bacteria from buttermilk
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3432966)
  AUTHORS   Mukherjee,D. and Mandal,N.C.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JUL-2023) Botany, Visva-Bharati University,
            Santiniketan, Bolpur, West Bengal 731235, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAUMKH000000000.1.
            The Lactiplantibacillus plantarum whole genome shotgun (WGS)
            project has the project accession NZ_JAUMKH000000000.  This version
            of the project (01) has the accession number NZ_JAUMKH010000000,
            and consists of sequences JAUMKH010000001-JAUMKH010000054.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Prof. Narayan Chandra
            Mandal, Department of Botany, Visva-Bharati, India.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 20-JAN-2022
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 636.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172775.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:01:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,320
            CDSs (total)                      :: 3,245
            Genes (coding)                    :: 3,218
            CDSs (with protein)               :: 3,218
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 68
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 27
            CDSs (without protein)            :: 27
            Pseudo Genes (ambiguous residues) :: 0 of 27
            Pseudo Genes (frameshifted)       :: 6 of 27
            Pseudo Genes (incomplete)         :: 20 of 27
            Pseudo Genes (internal stop)      :: 5 of 27
            Pseudo Genes (multiple problems)  :: 3 of 27
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3432966
                     /organism="Lactiplantibacillus plantarum"
                     /mol_type="genomic DNA"
                     /strain="GG9"
                     /isolation_source="Buttermilk"
                     /db_xref="taxon:1590"
                     /geo_loc_name="India: West Bengal, Birbhum"
                     /collection_date="2018-10-20"
WGS         JAUMKH010000001-JAUMKH010000054
WGS_SCAFLD  NZ_JAUMKH010000001-NZ_JAUMKH010000054
//
LOCUS       NZ_JBIXEP010000000   5877073 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1065, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXEP000000000
VERSION     NZ_JBIXEP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247234
            Assembly: GCF_045621325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5877073)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXEP000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXEP000000000.  This version of the
            project (01) has the accession number NZ_JBIXEP010000000, and
            consists of sequences JBIXEP010000001-JBIXEP010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 210x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045621325.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:47:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,741
            CDSs (total)                      :: 5,620
            Genes (coding)                    :: 5,415
            CDSs (with protein)               :: 5,415
            Genes (RNA)                       :: 121
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 205
            CDSs (without protein)            :: 205
            Pseudo Genes (ambiguous residues) :: 0 of 205
            Pseudo Genes (frameshifted)       :: 109 of 205
            Pseudo Genes (incomplete)         :: 99 of 205
            Pseudo Genes (internal stop)      :: 23 of 205
            Pseudo Genes (multiple problems)  :: 22 of 205
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5877073
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1065"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXEP010000001-JBIXEP010000005
WGS_SCAFLD  NZ_JBIXEP010000001-NZ_JBIXEP010000005
//
LOCUS       NZ_LNCP01000000      3228096 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Lactiplantibacillus plantarum strain CRL 1506, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LNCP00000000
VERSION     NZ_LNCP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04266587
            Assembly: GCF_001444495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lactiplantibacillus plantarum
  ORGANISM  Lactiplantibacillus plantarum
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactiplantibacillus.
REFERENCE   1  (bases 1 to 3228096)
  AUTHORS   Saavedra,L., Hebert,E.M., Albarracin,L., Salva,S., Alvarez,S.,
            Kitazawa,H. and Villena,J.
  TITLE     Draft Genome Sequence of Lactobacillus plantarum CRL1506, an
            Immunomodulatory Strain Isolated from Goat Milk
  JOURNAL   Genome Announc 4 (2), e00108-16 (2016)
   PUBMED   26966208
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3228096)
  AUTHORS   Saavedra,L., Hebert,E.M., Albarracin,L., Salva,S., Alvarez,S.,
            Kitazawa,H. and Villena,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-NOV-2015) Technology, CERELA-CONICET, Chacabuco 145,
            San Miguel de Tucuman, Tucuman 4000, Argentina
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LNCP00000000.1.
            The Lactiplantibacillus plantarum whole genome shotgun (WGS)
            project has the project accession NZ_LNCP00000000.  This version of
            the project (01) has the accession number NZ_LNCP01000000, and
            consists of sequences LNCP01000001-LNCP01000014.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: NGEN (DNAStar) v. 12.2.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 520.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001444495.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:57:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,072
            CDSs (total)                      :: 2,988
            Genes (coding)                    :: 2,962
            CDSs (with protein)               :: 2,962
            Genes (RNA)                       :: 84
            rRNAs                             :: 6, 4, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 3, 2 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 11 of 26
            Pseudo Genes (incomplete)         :: 11 of 26
            Pseudo Genes (internal stop)      :: 9 of 26
            Pseudo Genes (multiple problems)  :: 4 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3228096
                     /organism="Lactiplantibacillus plantarum"
                     /mol_type="genomic DNA"
                     /strain="CRL 1506"
                     /isolation_source="goat cheese"
                     /host="goat"
                     /culture_collection="CRL:1506"
                     /db_xref="taxon:1590"
                     /geo_loc_name="Argentina: Tucuman"
                     /collection_date="2005-03-02"
WGS         LNCP01000001-LNCP01000014
WGS_SCAFLD  NZ_LNCP01000001-NZ_LNCP01000014
//
LOCUS       NZ_JBJLNB010000000   5402403 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 289115, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLNB000000000
VERSION     NZ_JBJLNB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061649
            Assembly: GCF_045570035.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5402403)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5402403)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLNB000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLNB000000000.  This version of the
            project (01) has the accession number NZ_JBJLNB010000000, and
            consists of sequences JBJLNB010000001-JBJLNB010000093.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.54
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045570035.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:25:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,328
            CDSs (total)                      :: 5,236
            Genes (coding)                    :: 5,143
            CDSs (with protein)               :: 5,143
            Genes (RNA)                       :: 92
            rRNAs                             :: 1, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 4, 4 (16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 93
            CDSs (without protein)            :: 93
            Pseudo Genes (ambiguous residues) :: 0 of 93
            Pseudo Genes (frameshifted)       :: 41 of 93
            Pseudo Genes (incomplete)         :: 48 of 93
            Pseudo Genes (internal stop)      :: 17 of 93
            Pseudo Genes (multiple problems)  :: 10 of 93
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5402403
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="289115"
                     /isolation_source="RECTAL SWAB"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2021-07-27"
                     /collected_by="HUMS"
WGS         JBJLNB010000001-JBJLNB010000093
WGS_SCAFLD  NZ_JBJLNB010000001-NZ_JBJLNB010000093
//
LOCUS       NZ_JAUMKI010000000   3394259 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Lactiplantibacillus plantarum strain GG141, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAUMKI000000000
VERSION     NZ_JAUMKI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN36465266
            Assembly: GCF_056172795.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lactiplantibacillus plantarum
  ORGANISM  Lactiplantibacillus plantarum
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactiplantibacillus.
REFERENCE   1  (bases 1 to 3394259)
  AUTHORS   Mukherjee,D. and Mandal,N.C.
  TITLE     Isolation of lactic acid bacteria from buttermilk
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3394259)
  AUTHORS   Mukherjee,D. and Mandal,N.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JUL-2023) Botany, Visva-Bharati University,
            Santiniketan, Bolpur, West Bengal 731235, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAUMKI000000000.1.
            The Lactiplantibacillus plantarum whole genome shotgun (WGS)
            project has the project accession NZ_JAUMKI000000000.  This version
            of the project (01) has the accession number NZ_JAUMKI010000000,
            and consists of sequences JAUMKI010000001-JAUMKI010000043.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Prof. Narayan Chandra
            Mandal, Department of Botany, Visva-Bharati, India.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 300.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172795.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:56:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,247
            CDSs (total)                      :: 3,173
            Genes (coding)                    :: 3,148
            CDSs (with protein)               :: 3,148
            Genes (RNA)                       :: 74
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 25
            CDSs (without protein)            :: 25
            Pseudo Genes (ambiguous residues) :: 0 of 25
            Pseudo Genes (frameshifted)       :: 7 of 25
            Pseudo Genes (incomplete)         :: 17 of 25
            Pseudo Genes (internal stop)      :: 5 of 25
            Pseudo Genes (multiple problems)  :: 3 of 25
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3394259
                     /organism="Lactiplantibacillus plantarum"
                     /mol_type="genomic DNA"
                     /strain="GG141"
                     /isolation_source="Buttermilk"
                     /db_xref="taxon:1590"
                     /geo_loc_name="India: West Bengal, Birbhum"
                     /collection_date="2018-10-20"
WGS         JAUMKI010000001-JAUMKI010000043
WGS_SCAFLD  NZ_JAUMKI010000001-NZ_JAUMKI010000043
//
LOCUS       NZ_JBJLME010000000   5665393 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 927262, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLME000000000
VERSION     NZ_JBJLME000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061672
            Assembly: GCF_045566455.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5665393)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5665393)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLME000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLME000000000.  This version of the
            project (01) has the accession number NZ_JBJLME010000000, and
            consists of sequences JBJLME010000001-JBJLME010000122.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.77
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045566455.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:23:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,717
            CDSs (total)                      :: 5,628
            Genes (coding)                    :: 5,498
            CDSs (with protein)               :: 5,498
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 130
            CDSs (without protein)            :: 130
            Pseudo Genes (ambiguous residues) :: 0 of 130
            Pseudo Genes (frameshifted)       :: 56 of 130
            Pseudo Genes (incomplete)         :: 77 of 130
            Pseudo Genes (internal stop)      :: 22 of 130
            Pseudo Genes (multiple problems)  :: 21 of 130
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5665393
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="927262"
                     /isolation_source="SURGICAL WOUND"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-04-30"
                     /collected_by="HUMS"
WGS         JBJLME010000001-JBJLME010000122
WGS_SCAFLD  NZ_JBJLME010000001-NZ_JBJLME010000122
//
LOCUS       NZ_JBJLNG010000000   5855509 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 1096796, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLNG000000000
VERSION     NZ_JBJLNG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061644
            Assembly: GCF_045570205.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5855509)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5855509)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLNG000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLNG000000000.  This version of the
            project (01) has the accession number NZ_JBJLNG010000000, and
            consists of sequences JBJLNG010000001-JBJLNG010000113.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.49
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045570205.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:23:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,865
            CDSs (total)                      :: 5,782
            Genes (coding)                    :: 5,633
            CDSs (with protein)               :: 5,633
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 149
            CDSs (without protein)            :: 149
            Pseudo Genes (ambiguous residues) :: 0 of 149
            Pseudo Genes (frameshifted)       :: 58 of 149
            Pseudo Genes (incomplete)         :: 93 of 149
            Pseudo Genes (internal stop)      :: 26 of 149
            Pseudo Genes (multiple problems)  :: 21 of 149
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5855509
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="1096796"
                     /isolation_source="RECTAL SWAB"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2024-01-02"
                     /collected_by="HUMS"
WGS         JBJLNG010000001-JBJLNG010000113
WGS_SCAFLD  NZ_JBJLNG010000001-NZ_JBJLNG010000113
//
LOCUS       NZ_JBJLMK010000000   5531698 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 890587, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLMK000000000
VERSION     NZ_JBJLMK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061666
            Assembly: GCF_045566535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5531698)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5531698)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLMK000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLMK000000000.  This version of the
            project (01) has the accession number NZ_JBJLMK010000000, and
            consists of sequences JBJLMK010000001-JBJLMK010000109.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.71
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045566535.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:26:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,437
            CDSs (total)                      :: 5,380
            Genes (coding)                    :: 5,249
            CDSs (with protein)               :: 5,249
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 131
            CDSs (without protein)            :: 131
            Pseudo Genes (ambiguous residues) :: 0 of 131
            Pseudo Genes (frameshifted)       :: 49 of 131
            Pseudo Genes (incomplete)         :: 76 of 131
            Pseudo Genes (internal stop)      :: 23 of 131
            Pseudo Genes (multiple problems)  :: 14 of 131
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5531698
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="890587"
                     /isolation_source="RECTAL SWAB"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-03-07"
                     /collected_by="HUMS"
WGS         JBJLMK010000001-JBJLMK010000109
WGS_SCAFLD  NZ_JBJLMK010000001-NZ_JBJLMK010000109
//
LOCUS       NZ_JBIGMF010000000   5539456 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E334, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGMF000000000
VERSION     NZ_JBIGMF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130660
            Assembly: GCF_045571895.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5539456)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGMF000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGMF000000000.  This version of the
            project (01) has the accession number NZ_JBIGMF010000000, and
            consists of sequences JBIGMF010000001-JBIGMF010000003.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 276x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045571895.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:21:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,410
            CDSs (total)                      :: 5,284
            Genes (coding)                    :: 5,190
            CDSs (with protein)               :: 5,190
            Genes (RNA)                       :: 126
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 94
            CDSs (without protein)            :: 94
            Pseudo Genes (ambiguous residues) :: 0 of 94
            Pseudo Genes (frameshifted)       :: 48 of 94
            Pseudo Genes (incomplete)         :: 43 of 94
            Pseudo Genes (internal stop)      :: 15 of 94
            Pseudo Genes (multiple problems)  :: 10 of 94
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5539456
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E334"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGMF010000001-JBIGMF010000003
WGS_SCAFLD  NZ_JBIGMF010000001-NZ_JBIGMF010000003
//
LOCUS       NZ_LNXT01000000      3736683 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Legionella birminghamensis strain CDC#1407-AL-14, whole genome
            shotgun sequencing project.
ACCESSION   NZ_LNXT00000000
VERSION     NZ_LNXT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04274765
            Assembly: GCF_001467505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Legionella birminghamensis
  ORGANISM  Legionella birminghamensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1  (bases 1 to 3736683)
  AUTHORS   Burstein,D., Amaro,F., Zusman,T., Lifshitz,Z., Cohen,O.,
            Gilbert,J.A., Pupko,T., Shuman,H.A. and Segal,G.
  TITLE     Genomic analysis of 38 Legionella species identifies large and
            diverse effector repertoires
  JOURNAL   Nat Genet 48 (2), 167-175 (2016)
   PUBMED   26752266
REFERENCE   2  (bases 1 to 3736683)
  AUTHORS   Burstein,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-NOV-2015) Cell Research and Immunology, Tel Aviv
            University, Tel Aviv 69978, Israel
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LNXT00000000.1.
            The Legionella birminghamensis whole genome shotgun (WGS) project
            has the project accession NZ_LNXT00000000.  This version of the
            project (01) has the accession number NZ_LNXT01000000, and consists
            of sequences LNXT01000001-LNXT01000054.
            Annotated using prokka 1.11.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.2.10
            Genome Coverage       :: 558x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001467505.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:51:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,253
            CDSs (total)                      :: 3,204
            Genes (coding)                    :: 3,160
            CDSs (with protein)               :: 3,160
            Genes (RNA)                       :: 49
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 44
            CDSs (without protein)            :: 44
            Pseudo Genes (ambiguous residues) :: 0 of 44
            Pseudo Genes (frameshifted)       :: 16 of 44
            Pseudo Genes (incomplete)         :: 33 of 44
            Pseudo Genes (internal stop)      :: 3 of 44
            Pseudo Genes (multiple problems)  :: 7 of 44
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3736683
                     /organism="Legionella birminghamensis"
                     /mol_type="genomic DNA"
                     /strain="CDC#1407-AL-14"
                     /isolation_source="Lung biopsy"
                     /host="Homo sapiens"
                     /culture_collection="ATCC:43702"
                     /type_material="type strain of Legionella birminghamensis"
                     /db_xref="taxon:28083"
                     /geo_loc_name="USA: Alabama"
                     /collection_date="1986"
                     /collected_by="Univ. Alabama Sch. Med"
WGS         LNXT01000001-LNXT01000054
WGS_SCAFLD  NZ_LNXT01000001-NZ_LNXT01000054
//
LOCUS       NZ_JBJLLX010000000   5536002 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 944560, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLLX000000000
VERSION     NZ_JBJLLX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061679
            Assembly: GCF_045566795.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5536002)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5536002)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLLX000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLLX000000000.  This version of the
            project (01) has the accession number NZ_JBJLLX010000000, and
            consists of sequences JBJLLX010000001-JBJLLX010000110.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.84
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045566795.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:36:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,531
            CDSs (total)                      :: 5,443
            Genes (coding)                    :: 5,282
            CDSs (with protein)               :: 5,282
            Genes (RNA)                       :: 88
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 3 (16S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 161
            CDSs (without protein)            :: 161
            Pseudo Genes (ambiguous residues) :: 0 of 161
            Pseudo Genes (frameshifted)       :: 73 of 161
            Pseudo Genes (incomplete)         :: 88 of 161
            Pseudo Genes (internal stop)      :: 38 of 161
            Pseudo Genes (multiple problems)  :: 32 of 161
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5536002
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="944560"
                     /isolation_source="RECTAL SWAB"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-05-25"
                     /collected_by="HUMS"
WGS         JBJLLX010000001-JBJLLX010000110
WGS_SCAFLD  NZ_JBJLLX010000001-NZ_JBJLLX010000110
//
LOCUS       NZ_JBIGMS010000000   5568776 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E317, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGMS000000000
VERSION     NZ_JBIGMS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130645
            Assembly: GCF_045572155.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5568776)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGMS000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGMS000000000.  This version of the
            project (01) has the accession number NZ_JBIGMS010000000, and
            consists of sequences JBIGMS010000001-JBIGMS010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 310x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045572155.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:26:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,529
            CDSs (total)                      :: 5,408
            Genes (coding)                    :: 5,240
            CDSs (with protein)               :: 5,240
            Genes (RNA)                       :: 121
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 168
            CDSs (without protein)            :: 168
            Pseudo Genes (ambiguous residues) :: 0 of 168
            Pseudo Genes (frameshifted)       :: 93 of 168
            Pseudo Genes (incomplete)         :: 79 of 168
            Pseudo Genes (internal stop)      :: 15 of 168
            Pseudo Genes (multiple problems)  :: 17 of 168
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5568776
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E317"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGMS010000001-JBIGMS010000007
WGS_SCAFLD  NZ_JBIGMS010000001-NZ_JBIGMS010000007
//
LOCUS       NZ_JBJLMM010000000   5598367 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 882763, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLMM000000000
VERSION     NZ_JBJLMM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061664
            Assembly: GCF_045566575.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5598367)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5598367)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLMM000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLMM000000000.  This version of the
            project (01) has the accession number NZ_JBJLMM010000000, and
            consists of sequences JBJLMM010000001-JBJLMM010000065.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.69
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045566575.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:22:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,531
            CDSs (total)                      :: 5,438
            Genes (coding)                    :: 5,300
            CDSs (with protein)               :: 5,300
            Genes (RNA)                       :: 93
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 78
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 138
            CDSs (without protein)            :: 138
            Pseudo Genes (ambiguous residues) :: 0 of 138
            Pseudo Genes (frameshifted)       :: 58 of 138
            Pseudo Genes (incomplete)         :: 78 of 138
            Pseudo Genes (internal stop)      :: 26 of 138
            Pseudo Genes (multiple problems)  :: 20 of 138
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5598367
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="882763"
                     /isolation_source="RECTAL SWAB"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-02-23"
                     /collected_by="HUMS"
WGS         JBJLMM010000001-JBJLMM010000065
WGS_SCAFLD  NZ_JBJLMM010000001-NZ_JBJLMM010000065
//
LOCUS       NZ_CBDBYI010000000   3459110 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Lactiplantibacillus plantarum isolate Lactobacillus plantarum VK-6,
            whole genome shotgun sequencing project.
ACCESSION   NZ_CBDBYI000000000
VERSION     NZ_CBDBYI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117819812
            Assembly: GCF_965213335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lactiplantibacillus plantarum
  ORGANISM  Lactiplantibacillus plantarum
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactiplantibacillus.
REFERENCE   1  (bases 1 to 3459110)
  AUTHORS   Kisand,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAR-2025) University of Tartu, Institute of
            Technology, Environmental Microbiology, Nooruse 1, 50411, Estonia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBDBYI000000000.1.
            The Lactiplantibacillus plantarum whole genome shotgun (WGS)
            project has the project accession NZ_CBDBYI000000000.  This version
            of the project (01) has the accession number NZ_CBDBYI010000000,
            and consists of sequences CBDBYI010000001-CBDBYI010000046.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_965213335.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:39:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,355
            CDSs (total)                      :: 3,261
            Genes (coding)                    :: 3,185
            CDSs (with protein)               :: 3,185
            Genes (RNA)                       :: 94
            rRNAs                             :: 6, 7, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 4, 5 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 72
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 33 of 76
            Pseudo Genes (incomplete)         :: 41 of 76
            Pseudo Genes (internal stop)      :: 13 of 76
            Pseudo Genes (multiple problems)  :: 9 of 76
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3459110
                     /organism="Lactiplantibacillus plantarum"
                     /mol_type="genomic DNA"
                     /isolate="Lactobacillus plantarum VK-6"
                     /db_xref="taxon:1590"
                     /geo_loc_name="Estonia"
                     /collection_date="2018"
WGS         CBDBYI010000001-CBDBYI010000046
WGS_SCAFLD  NZ_CBDBYI010000001-NZ_CBDBYI010000046
//
LOCUS       NZ_JBJLLQ010000000   5691574 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain 988318, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJLLQ000000000
VERSION     NZ_JBJLLQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45061686
            Assembly: GCF_045566615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5691574)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Genomic characterization of Carbapenemase-producing
            En-terobacteriaceae using whole genome sequencing data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5691574)
  AUTHORS   Tristancho-Baro,A.I., Milagro-Beamonte,A., Lopez-Calleja,A.I.,
            Franco,L.E., Ariza,M., Fortuno,B., Lopez,C., Latorre,M., Clusa,L.,
            Martinez,R., Gracia-Grataloup,Y., Perez,N., Torres,C. and
            Rezusta,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Microbiology, Miguel Servet University
            Hospital, Padre Arrupe 13 D, Zaragoza, Zaragoza 50009, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLLQ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJLLQ000000000.  This version of the
            project (01) has the accession number NZ_JBJLLQ010000000, and
            consists of sequences JBJLLQ010000001-JBJLLQ010000118.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-JUN-2024
            Assembly Method        :: SPAdes v. 3.15.91
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045566615.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:26:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,672
            CDSs (total)                      :: 5,586
            Genes (coding)                    :: 5,445
            CDSs (with protein)               :: 5,445
            Genes (RNA)                       :: 86
            rRNAs                             :: 1, 4, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 4, 3 (16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 141
            CDSs (without protein)            :: 141
            Pseudo Genes (ambiguous residues) :: 0 of 141
            Pseudo Genes (frameshifted)       :: 55 of 141
            Pseudo Genes (incomplete)         :: 88 of 141
            Pseudo Genes (internal stop)      :: 23 of 141
            Pseudo Genes (multiple problems)  :: 20 of 141
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5691574
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="988318"
                     /isolation_source="RECTAL SWAB"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Spain: Aragon, Zaragoza"
                     /lat_lon="41.633510 N 0.901576 W"
                     /collection_date="2023-08-03"
                     /collected_by="HUMS"
WGS         JBJLLQ010000001-JBJLLQ010000118
WGS_SCAFLD  NZ_JBJLLQ010000001-NZ_JBJLLQ010000118
//
LOCUS       NZ_LNYA01000000      3237543 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Legionella erythra strain SE-32A-C8, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LNYA00000000
VERSION     NZ_LNYA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04274772
            Assembly: GCF_001467615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Legionella erythra
  ORGANISM  Legionella erythra
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1  (bases 1 to 3237543)
  AUTHORS   Burstein,D., Amaro,F., Zusman,T., Lifshitz,Z., Cohen,O.,
            Gilbert,J.A., Pupko,T., Shuman,H.A. and Segal,G.
  TITLE     Genomic analysis of 38 Legionella species identifies large and
            diverse effector repertoires
  JOURNAL   Nat Genet 48 (2), 167-175 (2016)
   PUBMED   26752266
REFERENCE   2  (bases 1 to 3237543)
  AUTHORS   Burstein,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2015) Cell Research and Immunology, Tel Aviv
            University, Tel Aviv 69978, Israel
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LNYA00000000.1.
            The Legionella erythra whole genome shotgun (WGS) project has the
            project accession NZ_LNYA00000000.  This version of the project
            (01) has the accession number NZ_LNYA01000000, and consists of
            sequences LNYA01000001-LNYA01000036.
            Annotated using prokka 1.11.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.2.10
            Genome Coverage       :: 1524x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001467615.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:56:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,025
            CDSs (total)                      :: 2,977
            Genes (coding)                    :: 2,937
            CDSs (with protein)               :: 2,937
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 40
            CDSs (without protein)            :: 40
            Pseudo Genes (ambiguous residues) :: 0 of 40
            Pseudo Genes (frameshifted)       :: 11 of 40
            Pseudo Genes (incomplete)         :: 30 of 40
            Pseudo Genes (internal stop)      :: 6 of 40
            Pseudo Genes (multiple problems)  :: 6 of 40
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3237543
                     /organism="Legionella erythra"
                     /mol_type="genomic DNA"
                     /strain="SE-32A-C8"
                     /isolation_source="Water in cooling tower"
                     /culture_collection="ATCC:35303"
                     /type_material="type strain of Legionella erythra"
                     /db_xref="taxon:448"
                     /geo_loc_name="USA: Seattle, Washington"
                     /collection_date="1981"
                     /collected_by="Gorman G. W."
WGS         LNYA01000001-LNYA01000036
WGS_SCAFLD  NZ_LNYA01000001-NZ_LNYA01000036
//
LOCUS       NZ_JBIGNK010000000   5764710 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E291, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGNK000000000
VERSION     NZ_JBIGNK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130622
            Assembly: GCF_045572515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5764710)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGNK000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGNK000000000.  This version of the
            project (01) has the accession number NZ_JBIGNK010000000, and
            consists of sequences JBIGNK010000001-JBIGNK010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 150x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045572515.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:33:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,739
            CDSs (total)                      :: 5,618
            Genes (coding)                    :: 5,407
            CDSs (with protein)               :: 5,407
            Genes (RNA)                       :: 121
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 211
            CDSs (without protein)            :: 211
            Pseudo Genes (ambiguous residues) :: 0 of 211
            Pseudo Genes (frameshifted)       :: 123 of 211
            Pseudo Genes (incomplete)         :: 109 of 211
            Pseudo Genes (internal stop)      :: 24 of 211
            Pseudo Genes (multiple problems)  :: 40 of 211
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5764710
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E291"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGNK010000001-JBIGNK010000006
WGS_SCAFLD  NZ_JBIGNK010000001-NZ_JBIGNK010000006
//
LOCUS       NZ_JBIGTQ010000000   5745401 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E22, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGTQ000000000
VERSION     NZ_JBIGTQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130389
            Assembly: GCF_045575815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5745401)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGTQ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGTQ000000000.  This version of the
            project (01) has the accession number NZ_JBIGTQ010000000, and
            consists of sequences JBIGTQ010000001-JBIGTQ010000017.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 396x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575815.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:51:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,725
            CDSs (total)                      :: 5,601
            Genes (coding)                    :: 5,238
            CDSs (with protein)               :: 5,238
            Genes (RNA)                       :: 124
            rRNAs                             :: 9, 9, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 363
            CDSs (without protein)            :: 363
            Pseudo Genes (ambiguous residues) :: 0 of 363
            Pseudo Genes (frameshifted)       :: 273 of 363
            Pseudo Genes (incomplete)         :: 107 of 363
            Pseudo Genes (internal stop)      :: 24 of 363
            Pseudo Genes (multiple problems)  :: 39 of 363
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5745401
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E22"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGTQ010000001-JBIGTQ010000017
WGS_SCAFLD  NZ_JBIGTQ010000001-NZ_JBIGTQ010000017
//
LOCUS       NZ_QNXC01000000      1889241 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Lactobacillus helveticus strain TJA10, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QNXC00000000
VERSION     NZ_QNXC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09604019
            Assembly: GCF_003545995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lactobacillus helveticus
  ORGANISM  Lactobacillus helveticus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1  (bases 1 to 1889241)
  AUTHORS   Cho,G.S., Cappello,C., Schrader,K., Fagbemigum,O.,
            Oguntoyinbo,F.A., Csovcsics,C., Rosch,N., Kabisch,J., Neve,H.,
            Bockelmann,W., Briviba,K., Modesto,M., Cilli,E., Mattarelli,P. and
            Franz,C.M.A.P.
  TITLE     Isolation and Characterization of Lactic Acid Bacteria from
            Fermented Goat Milk in Tajikistan
  JOURNAL   J Microbiol Biotechnol 28 (11), 1834-1845 (2018)
   PUBMED   30562882
REFERENCE   2  (bases 1 to 1889241)
  AUTHORS   Cho,G.-S., Cappello,C., Schrader,K., Fagbemigun,O.,
            Oguntoyinbo,F.A., Csovcsics,C., Roesch,N., Kabisch,J., Neve,H.,
            Bockelmann,W., Briviba,K., Modesto,M., Cilli,E., Mattarelli,P. and
            Franz,C.M.A.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUL-2018) Microbiology and Biotechnology, Max
            Rubner-Institut, Hermann-Weigmann-Str. 1, Kiel 24103, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QNXC00000000.1.
            The Lactobacillus helveticus whole genome shotgun (WGS) project has
            the project accession NZ_QNXC00000000.  This version of the project
            (01) has the accession number NZ_QNXC01000000, and consists of
            sequences QNXC01000001-QNXC01000254.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 86x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003545995.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:55:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,093
            CDSs (total)                      :: 2,032
            Genes (coding)                    :: 1,767
            CDSs (with protein)               :: 1,767
            Genes (RNA)                       :: 61
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 52
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 265
            CDSs (without protein)            :: 265
            Pseudo Genes (ambiguous residues) :: 0 of 265
            Pseudo Genes (frameshifted)       :: 144 of 265
            Pseudo Genes (incomplete)         :: 137 of 265
            Pseudo Genes (internal stop)      :: 74 of 265
            Pseudo Genes (multiple problems)  :: 80 of 265
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1889241
                     /organism="Lactobacillus helveticus"
                     /mol_type="genomic DNA"
                     /strain="TJA10"
                     /isolation_source="fermented goat milk"
                     /db_xref="taxon:1587"
                     /geo_loc_name="Tajikistan"
                     /collection_date="2014-09-01"
                     /collected_by="Prof. Antonio Panaino"
WGS         QNXC01000001-QNXC01000254
WGS_SCAFLD  NZ_QNXC01000001-NZ_QNXC01000254
//
LOCUS       NZ_JBIGPR010000000   5456600 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E186, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGPR000000000
VERSION     NZ_JBIGPR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130534
            Assembly: GCF_045573785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5456600)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGPR000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGPR000000000.  This version of the
            project (01) has the accession number NZ_JBIGPR010000000, and
            consists of sequences JBIGPR010000001-JBIGPR010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 325x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045573785.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:40:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,380
            CDSs (total)                      :: 5,257
            Genes (coding)                    :: 5,108
            CDSs (with protein)               :: 5,108
            Genes (RNA)                       :: 123
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 149
            CDSs (without protein)            :: 149
            Pseudo Genes (ambiguous residues) :: 0 of 149
            Pseudo Genes (frameshifted)       :: 76 of 149
            Pseudo Genes (incomplete)         :: 73 of 149
            Pseudo Genes (internal stop)      :: 25 of 149
            Pseudo Genes (multiple problems)  :: 20 of 149
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5456600
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E186"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGPR010000001-JBIGPR010000006
WGS_SCAFLD  NZ_JBIGPR010000001-NZ_JBIGPR010000006
//
LOCUS       NZ_JBSWUC010000000   2702847 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Kocuria rhizophila strain ABH4_546, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWUC000000000
VERSION     NZ_JBSWUC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862020
            Assembly: GCF_056158865.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kocuria rhizophila
  ORGANISM  Kocuria rhizophila
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Kocuria.
REFERENCE   1  (bases 1 to 2702847)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWUC000000000.1.
            The Kocuria rhizophila whole genome shotgun (WGS) project has the
            project accession NZ_JBSWUC000000000.  This version of the project
            (01) has the accession number NZ_JBSWUC010000000, and consists of
            sequences JBSWUC010000001-JBSWUC010000003.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1050x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056158865.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:00:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,396
            CDSs (total)                      :: 2,338
            Genes (coding)                    :: 2,303
            CDSs (with protein)               :: 2,303
            Genes (RNA)                       :: 58
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 21 of 35
            Pseudo Genes (incomplete)         :: 15 of 35
            Pseudo Genes (internal stop)      :: 3 of 35
            Pseudo Genes (multiple problems)  :: 2 of 35
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2702847
                     /organism="Kocuria rhizophila"
                     /mol_type="genomic DNA"
                     /strain="ABH4_546"
                     /isolation_source="Marine"
                     /db_xref="taxon:72000"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2024-02-27"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWUC010000001-JBSWUC010000003
WGS_SCAFLD  NZ_JBSWUC010000001-NZ_JBSWUC010000003
//
LOCUS       NZ_JBIGTH010000000   5645534 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E42, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGTH000000000
VERSION     NZ_JBIGTH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130405
            Assembly: GCF_045575665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5645534)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGTH000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGTH000000000.  This version of the
            project (01) has the accession number NZ_JBIGTH010000000, and
            consists of sequences JBIGTH010000001-JBIGTH010000010.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 293x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575665.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:57:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,648
            CDSs (total)                      :: 5,528
            Genes (coding)                    :: 5,271
            CDSs (with protein)               :: 5,271
            Genes (RNA)                       :: 120
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 257
            CDSs (without protein)            :: 257
            Pseudo Genes (ambiguous residues) :: 0 of 257
            Pseudo Genes (frameshifted)       :: 158 of 257
            Pseudo Genes (incomplete)         :: 112 of 257
            Pseudo Genes (internal stop)      :: 27 of 257
            Pseudo Genes (multiple problems)  :: 35 of 257
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5645534
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E42"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGTH010000001-JBIGTH010000010
WGS_SCAFLD  NZ_JBIGTH010000001-NZ_JBIGTH010000010
//
LOCUS       NZ_JBIWYO010000000   5431325 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1248, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIWYO000000000
VERSION     NZ_JBIWYO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247391
            Assembly: GCF_045618125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5431325)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIWYO000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIWYO000000000.  This version of the
            project (01) has the accession number NZ_JBIWYO010000000, and
            consists of sequences JBIWYO010000001-JBIWYO010000003.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 122x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045618125.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:34:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,323
            CDSs (total)                      :: 5,199
            Genes (coding)                    :: 5,076
            CDSs (with protein)               :: 5,076
            Genes (RNA)                       :: 124
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 68 of 123
            Pseudo Genes (incomplete)         :: 64 of 123
            Pseudo Genes (internal stop)      :: 20 of 123
            Pseudo Genes (multiple problems)  :: 23 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5431325
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1248"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIWYO010000001-JBIWYO010000003
WGS_SCAFLD  NZ_JBIWYO010000001-NZ_JBIWYO010000003
//
LOCUS       NZ_JBIXBT010000000   5618910 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1148, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXBT000000000
VERSION     NZ_JBIXBT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247308
            Assembly: GCF_045619865.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5618910)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXBT000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXBT000000000.  This version of the
            project (01) has the accession number NZ_JBIXBT010000000, and
            consists of sequences JBIXBT010000001-JBIXBT010000014.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 143x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045619865.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:44:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,527
            CDSs (total)                      :: 5,402
            Genes (coding)                    :: 5,235
            CDSs (with protein)               :: 5,235
            Genes (RNA)                       :: 125
            rRNAs                             :: 9, 9, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 167
            CDSs (without protein)            :: 167
            Pseudo Genes (ambiguous residues) :: 0 of 167
            Pseudo Genes (frameshifted)       :: 97 of 167
            Pseudo Genes (incomplete)         :: 70 of 167
            Pseudo Genes (internal stop)      :: 20 of 167
            Pseudo Genes (multiple problems)  :: 18 of 167
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5618910
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1148"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXBT010000001-JBIXBT010000014
WGS_SCAFLD  NZ_JBIXBT010000001-NZ_JBIXBT010000014
//
LOCUS       NZ_JBSWVH010000000   2700195 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Kytococcus sedentarius strain ABR4_056, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSWVH000000000
VERSION     NZ_JBSWVH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861981
            Assembly: GCF_056159525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kytococcus sedentarius
  ORGANISM  Kytococcus sedentarius
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Kytococcaceae; Kytococcus.
REFERENCE   1  (bases 1 to 2700195)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWVH000000000.1.
            The Kytococcus sedentarius whole genome shotgun (WGS) project has
            the project accession NZ_JBSWVH000000000.  This version of the
            project (01) has the accession number NZ_JBSWVH010000000, and
            consists of sequences JBSWVH010000001-JBSWVH010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1143x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056159525.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:08:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,542
            CDSs (total)                      :: 2,486
            Genes (coding)                    :: 2,438
            CDSs (with protein)               :: 2,438
            Genes (RNA)                       :: 56
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 48
            CDSs (without protein)            :: 48
            Pseudo Genes (ambiguous residues) :: 0 of 48
            Pseudo Genes (frameshifted)       :: 10 of 48
            Pseudo Genes (incomplete)         :: 41 of 48
            Pseudo Genes (internal stop)      :: 3 of 48
            Pseudo Genes (multiple problems)  :: 5 of 48
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2700195
                     /organism="Kytococcus sedentarius"
                     /mol_type="genomic DNA"
                     /strain="ABR4_056"
                     /isolation_source="Marine"
                     /db_xref="taxon:1276"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWVH010000001-JBSWVH010000002
WGS_SCAFLD  NZ_JBSWVH010000001-NZ_JBSWVH010000002
//
LOCUS       NZ_JBIXDB010000000   5533461 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1111, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXDB000000000
VERSION     NZ_JBIXDB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247274
            Assembly: GCF_045620525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5533461)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXDB000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXDB000000000.  This version of the
            project (01) has the accession number NZ_JBIXDB010000000, and
            consists of sequences JBIXDB010000001-JBIXDB010000002.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 143x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045620525.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:52:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,417
            CDSs (total)                      :: 5,292
            Genes (coding)                    :: 5,173
            CDSs (with protein)               :: 5,173
            Genes (RNA)                       :: 125
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 119
            CDSs (without protein)            :: 119
            Pseudo Genes (ambiguous residues) :: 0 of 119
            Pseudo Genes (frameshifted)       :: 71 of 119
            Pseudo Genes (incomplete)         :: 56 of 119
            Pseudo Genes (internal stop)      :: 14 of 119
            Pseudo Genes (multiple problems)  :: 18 of 119
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5533461
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1111"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXDB010000001-JBIXDB010000002
WGS_SCAFLD  NZ_JBIXDB010000001-NZ_JBIXDB010000002
//
LOCUS       NZ_JBRWZX010000000   5570711 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella variicola strain MEI4O2-23, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWZX000000000
VERSION     NZ_JBRWZX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50713136
            Assembly: GCF_056155325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella variicola
  ORGANISM  Klebsiella variicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5570711)
  AUTHORS   Spahr,Y., Collaud,A. and Perreten,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2025) Institute of Veterinary Bacteriology,
            University of Bern, Laenggassstrasse 122, Bern 3012, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWZX000000000.1.
            The Klebsiella variicola whole genome shotgun (WGS) project has the
            project accession NZ_JBRWZX000000000.  This version of the project
            (01) has the accession number NZ_JBRWZX010000000, and consists of
            sequences JBRWZX010000001-JBRWZX010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Autocycler v. 0.5.2; Polypolish v. 0.6.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 371.91800298023x
            Sequencing Technology  :: Oxford Nanopore MinION; Illumina NovaSeq
                                      6000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155325.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:31:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,441
            CDSs (total)                      :: 5,315
            Genes (coding)                    :: 5,212
            CDSs (with protein)               :: 5,212
            Genes (RNA)                       :: 126
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 103
            CDSs (without protein)            :: 103
            Pseudo Genes (ambiguous residues) :: 0 of 103
            Pseudo Genes (frameshifted)       :: 49 of 103
            Pseudo Genes (incomplete)         :: 52 of 103
            Pseudo Genes (internal stop)      :: 24 of 103
            Pseudo Genes (multiple problems)  :: 17 of 103
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5570711
                     /organism="Klebsiella variicola"
                     /mol_type="genomic DNA"
                     /strain="MEI4O2-23"
                     /isolation_source="Soil surface"
                     /db_xref="taxon:244366"
                     /geo_loc_name="Switzerland: Bern"
                     /collection_date="2023-01"
                     /collected_by="Veterinary staff"
WGS         JBRWZX010000001-JBRWZX010000002
WGS_SCAFLD  NZ_CM149563
WGS_SCAFLD  NZ_JBRWZX010000002
//
LOCUS       NZ_JBIXDZ010000000   5799901 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1083, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXDZ000000000
VERSION     NZ_JBIXDZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247250
            Assembly: GCF_045621025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5799901)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXDZ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXDZ000000000.  This version of the
            project (01) has the accession number NZ_JBIXDZ010000000, and
            consists of sequences JBIXDZ010000001-JBIXDZ010000011.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 484x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045621025.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:53:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,782
            CDSs (total)                      :: 5,656
            Genes (coding)                    :: 5,514
            CDSs (with protein)               :: 5,514
            Genes (RNA)                       :: 126
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 142
            CDSs (without protein)            :: 142
            Pseudo Genes (ambiguous residues) :: 0 of 142
            Pseudo Genes (frameshifted)       :: 87 of 142
            Pseudo Genes (incomplete)         :: 58 of 142
            Pseudo Genes (internal stop)      :: 11 of 142
            Pseudo Genes (multiple problems)  :: 13 of 142
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5799901
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1083"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXDZ010000001-JBIXDZ010000011
WGS_SCAFLD  NZ_JBIXDZ010000001-NZ_JBIXDZ010000011
//
LOCUS       NZ_AFYQ01000000      3071147 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Lacticaseibacillus paracasei strain UCD174, whole genome shotgun
            sequencing project.
ACCESSION   NZ_AFYQ00000000
VERSION     NZ_AFYQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02472002
            Assembly: GCF_000309705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus paracasei
  ORGANISM  Lacticaseibacillus paracasei
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 3071147)
  AUTHORS   Broadbent,J.R., Neeno-Eckwall,E.C., Stahl,B., Tandee,K., Cai,H.,
            Morovic,W., Horvath,P., Heidenreich,J., Perna,N.T., Barrangou,R.
            and Steele,J.L.
  TITLE     Analysis of the Lactobacillus casei supragenome and its influence
            in species evolution and lifestyle adaptation
  JOURNAL   BMC Genomics 13, 533 (2012)
   PUBMED   23035691
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3071147)
  AUTHORS   Steele,J., Neeno-Eckwall,E., Atkas,B., Heidenreich,J., Tandee,K.,
            Cai,H. and Broadbent,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-SEP-2011) Biotechnology Center, University of
            Wisconsin, 425 Henry Mall, Madison, WI 53706, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AFYQ00000000.1.
            The Lacticaseibacillus paracasei whole genome shotgun (WGS) project
            has the project accession NZ_AFYQ00000000.  This version of the
            project (01) has the accession number NZ_AFYQ01000000, and consists
            of sequences AFYQ01000001-AFYQ01000116.
            Strain available from Dr. James Steele, Department of Food Science,
            125 Babcock Hall, 1605 Linden Drive, Madison, WI 53706-1565.
            This Lactobacillus casei UCD174 WGS draft sequence was annotated by
            the automated RAST service (http://rast.nmpdr.org/) with manual
            inspection and clean-up; pseudogene assignments were based solely
            on the available sequence and may include sequencing artifacts that
            do not necessarily reflect the biology of this organism.
            The organism was changed from 'Lactobacillus casei UCD174' to
            'Lactobacillus paracasei' in October 2018.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_000309705.1
            Current Name        :: Lactobacillus paracasei
            Previous Name       :: Lactobacillus casei UCD174
            Date Updated        :: 2018-10-11
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. TYPE genome for current name
            A1 Genome (subject) :: GCA_001436385.1
            A1 Name             :: Lactobacillus paracasei
            A1 ANI              :: 98.82212%
            A1 Query Coverage   :: 81.05%
            A1 Subject Coverage :: 86.37%
            Analysis 2 (A2)     :: Query vs. TYPE genome for previous name
            A2 Genome (subject) :: GCA_000829055.1
            A2 Name             :: Lactobacillus casei UCD174
            A2 ANI              :: 84.1066%
            A2 Query Coverage   :: 19.92%
            A2 Subject Coverage :: 20.72%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SeqMan NGen v. 2
            Genome Coverage       :: 25x
            Sequencing Technology :: 454 FLX-Titanium
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000309705.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:25:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,185
            CDSs (total)                      :: 3,110
            Genes (coding)                    :: 2,835
            CDSs (with protein)               :: 2,835
            Genes (RNA)                       :: 75
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 4 (16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 275
            CDSs (without protein)            :: 275
            Pseudo Genes (ambiguous residues) :: 11 of 275
            Pseudo Genes (frameshifted)       :: 146 of 275
            Pseudo Genes (incomplete)         :: 132 of 275
            Pseudo Genes (internal stop)      :: 28 of 275
            Pseudo Genes (multiple problems)  :: 39 of 275
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3071147
                     /organism="Lacticaseibacillus paracasei"
                     /mol_type="genomic DNA"
                     /strain="UCD174"
                     /isolation_source="wine"
                     /db_xref="taxon:1597"
                     /geo_loc_name="USA: California"
WGS         AFYQ01000001-AFYQ01000116
WGS_SCAFLD  NZ_AFYQ01000001-NZ_AFYQ01000116
//
LOCUS       NZ_JBIGTS010000000   5626411 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E20, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGTS000000000
VERSION     NZ_JBIGTS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130387
            Assembly: GCF_045575855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5626411)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGTS000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGTS000000000.  This version of the
            project (01) has the accession number NZ_JBIGTS010000000, and
            consists of sequences JBIGTS010000001-JBIGTS010000012.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 132x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575855.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:47:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,532
            CDSs (total)                      :: 5,408
            Genes (coding)                    :: 5,231
            CDSs (with protein)               :: 5,231
            Genes (RNA)                       :: 124
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 177
            CDSs (without protein)            :: 177
            Pseudo Genes (ambiguous residues) :: 0 of 177
            Pseudo Genes (frameshifted)       :: 106 of 177
            Pseudo Genes (incomplete)         :: 74 of 177
            Pseudo Genes (internal stop)      :: 19 of 177
            Pseudo Genes (multiple problems)  :: 20 of 177
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5626411
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E20"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGTS010000001-JBIGTS010000012
WGS_SCAFLD  NZ_JBIGTS010000001-NZ_JBIGTS010000012
//
LOCUS       NZ_JBSWUO010000000   4102275 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Kocuria rosea strain ABL3_021, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWUO000000000
VERSION     NZ_JBSWUO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862004
            Assembly: GCF_056159085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kocuria rosea
  ORGANISM  Kocuria rosea
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Kocuria.
REFERENCE   1  (bases 1 to 4102275)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWUO000000000.1.
            The Kocuria rosea whole genome shotgun (WGS) project has the
            project accession NZ_JBSWUO000000000.  This version of the project
            (01) has the accession number NZ_JBSWUO010000000, and consists of
            sequences JBSWUO010000001-JBSWUO010000005.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 316x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056159085.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:11:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,865
            CDSs (total)                      :: 3,805
            Genes (coding)                    :: 3,638
            CDSs (with protein)               :: 3,638
            Genes (RNA)                       :: 60
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 167
            CDSs (without protein)            :: 167
            Pseudo Genes (ambiguous residues) :: 0 of 167
            Pseudo Genes (frameshifted)       :: 108 of 167
            Pseudo Genes (incomplete)         :: 67 of 167
            Pseudo Genes (internal stop)      :: 3 of 167
            Pseudo Genes (multiple problems)  :: 9 of 167
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4102275
                     /organism="Kocuria rosea"
                     /mol_type="genomic DNA"
                     /strain="ABL3_021"
                     /isolation_source="Marine"
                     /db_xref="taxon:1275"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-07-26"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWUO010000001-JBSWUO010000005
WGS_SCAFLD  NZ_JBSWUO010000001-NZ_JBSWUO010000005
//
LOCUS       NZ_JBIWZP010000000   5953400 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1215, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIWZP000000000
VERSION     NZ_JBIWZP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247364
            Assembly: GCF_045618715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5953400)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIWZP000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIWZP000000000.  This version of the
            project (01) has the accession number NZ_JBIWZP010000000, and
            consists of sequences JBIWZP010000001-JBIWZP010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 297x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045618715.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:39:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,901
            CDSs (total)                      :: 5,777
            Genes (coding)                    :: 5,553
            CDSs (with protein)               :: 5,553
            Genes (RNA)                       :: 124
            rRNAs                             :: 9, 9, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 224
            CDSs (without protein)            :: 224
            Pseudo Genes (ambiguous residues) :: 0 of 224
            Pseudo Genes (frameshifted)       :: 133 of 224
            Pseudo Genes (incomplete)         :: 100 of 224
            Pseudo Genes (internal stop)      :: 23 of 224
            Pseudo Genes (multiple problems)  :: 28 of 224
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5953400
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1215"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIWZP010000001-JBIWZP010000006
WGS_SCAFLD  NZ_JBIWZP010000001-NZ_JBIWZP010000006
//
LOCUS       NZ_AFYT01000000      2951397 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Lacticaseibacillus paracasei strain Lc-10, whole genome shotgun
            sequencing project.
ACCESSION   NZ_AFYT00000000
VERSION     NZ_AFYT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02472012
            Assembly: GCF_000309765.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus paracasei
  ORGANISM  Lacticaseibacillus paracasei
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 2951397)
  AUTHORS   Broadbent,J.R., Neeno-Eckwall,E.C., Stahl,B., Tandee,K., Cai,H.,
            Morovic,W., Horvath,P., Heidenreich,J., Perna,N.T., Barrangou,R.
            and Steele,J.L.
  TITLE     Analysis of the Lactobacillus casei supragenome and its influence
            in species evolution and lifestyle adaptation
  JOURNAL   BMC Genomics 13, 533 (2012)
   PUBMED   23035691
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2951397)
  AUTHORS   Neeno-Eckwall,E., Barrangou,R. and Stahl,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-AUG-2011) Biotechnology Center, University of
            Wisconsin, 425 Henry Mall, Madison, WI 53706, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AFYT00000000.1.
            The Lacticaseibacillus paracasei whole genome shotgun (WGS) project
            has the project accession NZ_AFYT00000000.  This version of the
            project (01) has the accession number NZ_AFYT01000000, and consists
            of sequences AFYT01000001-AFYT01000076.
            Strain available from Rodolphe Barrangou, Ph.D., Danisco USA Inc.,
            3329 Agriculture Drive, Madison, WI 53716.
            This Lactobacillus casei Lc-10 WGS draft sequence was annotated by
            the automated RAST service (http://rast.nmpdr.org/) with manual
            inspection and clean-up; pseudogene assignments were based solely
            on the available sequence and may include sequencing artifacts that
            do not necessarily reflect the biology of this organism.
            The organism was changed from 'Lactobacillus casei Lc-10' to
            'Lactobacillus paracasei' in October 2018.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_000309765.1
            Current Name        :: Lactobacillus paracasei
            Previous Name       :: Lactobacillus casei Lc-10
            Date Updated        :: 2018-10-11
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. TYPE genome for current name
            A1 Genome (subject) :: GCA_000159495.1
            A1 Name             :: Lactobacillus paracasei
            A1 ANI              :: 98.66885%
            A1 Query Coverage   :: 83.87%
            A1 Subject Coverage :: 85.78%
            Analysis 2 (A2)     :: Query vs. TYPE genome for previous name
            A2 Genome (subject) :: GCA_000829055.1
            A2 Name             :: Lactobacillus casei Lc-10
            A2 ANI              :: 84.20981%
            A2 Query Coverage   :: 21.17%
            A2 Subject Coverage :: 21.16%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SeqMan NGen v. 2
            Genome Coverage       :: 24x
            Sequencing Technology :: 454 FLX-Titanium
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000309765.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:23:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,915
            CDSs (total)                      :: 2,837
            Genes (coding)                    :: 2,697
            CDSs (with protein)               :: 2,697
            Genes (RNA)                       :: 78
            rRNAs                             :: 5, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5, 5 (16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 140
            CDSs (without protein)            :: 140
            Pseudo Genes (ambiguous residues) :: 1 of 140
            Pseudo Genes (frameshifted)       :: 69 of 140
            Pseudo Genes (incomplete)         :: 70 of 140
            Pseudo Genes (internal stop)      :: 20 of 140
            Pseudo Genes (multiple problems)  :: 19 of 140
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2951397
                     /organism="Lacticaseibacillus paracasei"
                     /mol_type="genomic DNA"
                     /strain="Lc-10"
                     /db_xref="taxon:1597"
WGS         AFYT01000001-AFYT01000076
WGS_SCAFLD  NZ_AFYT01000001-NZ_AFYT01000076
//
LOCUS       NZ_JBSWXG010000000   2737766 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Kocuria rhizophila strain ABM1_016, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWXG000000000
VERSION     NZ_JBSWXG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861926
            Assembly: GCF_056160465.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kocuria rhizophila
  ORGANISM  Kocuria rhizophila
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Kocuria.
REFERENCE   1  (bases 1 to 2737766)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWXG000000000.1.
            The Kocuria rhizophila whole genome shotgun (WGS) project has the
            project accession NZ_JBSWXG000000000.  This version of the project
            (01) has the accession number NZ_JBSWXG010000000, and consists of
            sequences JBSWXG010000001-JBSWXG010000029.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 499x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056160465.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:32:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,461
            CDSs (total)                      :: 2,399
            Genes (coding)                    :: 2,374
            CDSs (with protein)               :: 2,374
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 5, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 5, 3 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 25
            CDSs (without protein)            :: 25
            Pseudo Genes (ambiguous residues) :: 0 of 25
            Pseudo Genes (frameshifted)       :: 7 of 25
            Pseudo Genes (incomplete)         :: 20 of 25
            Pseudo Genes (internal stop)      :: 4 of 25
            Pseudo Genes (multiple problems)  :: 3 of 25
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2737766
                     /organism="Kocuria rhizophila"
                     /mol_type="genomic DNA"
                     /strain="ABM1_016"
                     /isolation_source="Marine"
                     /db_xref="taxon:72000"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2024-02-16"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWXG010000001-JBSWXG010000029
WGS_SCAFLD  NZ_JBSWXG010000001-NZ_JBSWXG010000029
//
LOCUS       NZ_JBSWYS010000000   4085507 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Kocuria rosea strain ABM4_136, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWYS000000000
VERSION     NZ_JBSWYS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861887
            Assembly: GCF_056161245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kocuria rosea
  ORGANISM  Kocuria rosea
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Kocuria.
REFERENCE   1  (bases 1 to 4085507)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWYS000000000.1.
            The Kocuria rosea whole genome shotgun (WGS) project has the
            project accession NZ_JBSWYS000000000.  This version of the project
            (01) has the accession number NZ_JBSWYS010000000, and consists of
            sequences JBSWYS010000001-JBSWYS010000195.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 270x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161245.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:53:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,858
            CDSs (total)                      :: 3,805
            Genes (coding)                    :: 3,745
            CDSs (with protein)               :: 3,745
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 60
            CDSs (without protein)            :: 60
            Pseudo Genes (ambiguous residues) :: 0 of 60
            Pseudo Genes (frameshifted)       :: 12 of 60
            Pseudo Genes (incomplete)         :: 53 of 60
            Pseudo Genes (internal stop)      :: 3 of 60
            Pseudo Genes (multiple problems)  :: 6 of 60
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4085507
                     /organism="Kocuria rosea"
                     /mol_type="genomic DNA"
                     /strain="ABM4_136"
                     /isolation_source="Marine"
                     /db_xref="taxon:1275"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-07-26"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWYS010000001-JBSWYS010000195
WGS_SCAFLD  NZ_JBSWYS010000001-NZ_JBSWYS010000195
//
LOCUS       NZ_AFYP01000000      3000054 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Lacticaseibacillus paracasei strain T71499, whole genome shotgun
            sequencing project.
ACCESSION   NZ_AFYP00000000
VERSION     NZ_AFYP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02472001
            Assembly: GCF_000309685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus paracasei
  ORGANISM  Lacticaseibacillus paracasei
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 3000054)
  AUTHORS   Broadbent,J.R., Neeno-Eckwall,E.C., Stahl,B., Tandee,K., Cai,H.,
            Morovic,W., Horvath,P., Heidenreich,J., Perna,N.T., Barrangou,R.
            and Steele,J.L.
  TITLE     Analysis of the Lactobacillus casei supragenome and its influence
            in species evolution and lifestyle adaptation
  JOURNAL   BMC Genomics 13, 533 (2012)
   PUBMED   23035691
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3000054)
  AUTHORS   Steele,J., Neeno-Eckwall,E., Atkas,B., Heidenreich,J., Tandee,K.,
            Cai,H. and Broadbent,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-AUG-2011) Biotechnology Center, University of
            Wisconsin, 425 Henry Mall, Madison, WI 53706, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AFYP00000000.1.
            The Lacticaseibacillus paracasei whole genome shotgun (WGS) project
            has the project accession NZ_AFYP00000000.  This version of the
            project (01) has the accession number NZ_AFYP01000000, and consists
            of sequences AFYP01000001-AFYP01000055.
            Strain available from Dr. James Steele, Department of Food Science,
            125 Babcock Hall, 1605 Linden Drive, Madison, WI 53706-1565.
            This Lactobacillus casei T71499 WGS draft sequence was annotated by
            the automated RAST service (http://rast.nmpdr.org/) with manual
            inspection and clean-up; pseudogene assignments were based solely
            on the available sequence and may include sequencing artifacts that
            do not necessarily reflect the biology of this organism.
            The organism was changed from 'Lactobacillus casei T71499' to
            'Lactobacillus paracasei' in October 2018.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_000309685.1
            Current Name        :: Lactobacillus paracasei
            Previous Name       :: Lactobacillus casei T71499
            Date Updated        :: 2018-10-11
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. TYPE genome for current name
            A1 Genome (subject) :: GCA_000829035.1
            A1 Name             :: Lactobacillus paracasei
            A1 ANI              :: 98.67326%
            A1 Query Coverage   :: 84.32%
            A1 Subject Coverage :: 83.82%
            Analysis 2 (A2)     :: Query vs. TYPE genome for previous name
            A2 Genome (subject) :: GCA_000829055.1
            A2 Name             :: Lactobacillus casei T71499
            A2 ANI              :: 83.83647%
            A2 Query Coverage   :: 19.18%
            A2 Subject Coverage :: 19.48%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SeqMan NGen v. 2
            Genome Coverage       :: 30x
            Sequencing Technology :: 454 FLX-Titanium
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000309685.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:24:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,932
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,696
            CDSs (with protein)               :: 2,696
            Genes (RNA)                       :: 76
            rRNAs                             :: 5, 5, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 5 (16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 160
            CDSs (without protein)            :: 160
            Pseudo Genes (ambiguous residues) :: 6 of 160
            Pseudo Genes (frameshifted)       :: 82 of 160
            Pseudo Genes (incomplete)         :: 83 of 160
            Pseudo Genes (internal stop)      :: 9 of 160
            Pseudo Genes (multiple problems)  :: 17 of 160
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3000054
                     /organism="Lacticaseibacillus paracasei"
                     /mol_type="genomic DNA"
                     /strain="T71499"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:1597"
                     /geo_loc_name="Finland"
WGS         AFYP01000001-AFYP01000055
WGS_SCAFLD  NZ_AFYP01000001-NZ_AFYP01000055
//
LOCUS       NZ_JBIXAO010000000   6183063 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1186, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXAO000000000
VERSION     NZ_JBIXAO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247339
            Assembly: GCF_045619245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 6183063)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXAO000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXAO000000000.  This version of the
            project (01) has the accession number NZ_JBIXAO010000000, and
            consists of sequences JBIXAO010000001-JBIXAO010000011.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 770x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045619245.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:43:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,200
            CDSs (total)                      :: 6,081
            Genes (coding)                    :: 5,825
            CDSs (with protein)               :: 5,825
            Genes (RNA)                       :: 119
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 256
            CDSs (without protein)            :: 256
            Pseudo Genes (ambiguous residues) :: 0 of 256
            Pseudo Genes (frameshifted)       :: 155 of 256
            Pseudo Genes (incomplete)         :: 115 of 256
            Pseudo Genes (internal stop)      :: 21 of 256
            Pseudo Genes (multiple problems)  :: 32 of 256
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6183063
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1186"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXAO010000001-JBIXAO010000011
WGS_SCAFLD  NZ_JBIXAO010000001-NZ_JBIXAO010000011
//
LOCUS       NZ_AFYU01000000      3075253 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Lacticaseibacillus paracasei strain Lpc-37, whole genome shotgun
            sequencing project.
ACCESSION   NZ_AFYU00000000
VERSION     NZ_AFYU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02472013
            Assembly: GCF_000309785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus paracasei
  ORGANISM  Lacticaseibacillus paracasei
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 3075253)
  AUTHORS   Broadbent,J.R., Neeno-Eckwall,E.C., Stahl,B., Tandee,K., Cai,H.,
            Morovic,W., Horvath,P., Heidenreich,J., Perna,N.T., Barrangou,R.
            and Steele,J.L.
  TITLE     Analysis of the Lactobacillus casei supragenome and its influence
            in species evolution and lifestyle adaptation
  JOURNAL   BMC Genomics 13, 533 (2012)
   PUBMED   23035691
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3075253)
  AUTHORS   Neeno-Eckwall,E., Barrangou,R. and Stahl,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-AUG-2011) Biotechnology Center, University of
            Wisconsin, 425 Henry Mall, Madison, WI 53706, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AFYU00000000.1.
            The Lacticaseibacillus paracasei whole genome shotgun (WGS) project
            has the project accession NZ_AFYU00000000.  This version of the
            project (01) has the accession number NZ_AFYU01000000, and consists
            of sequences AFYU01000001-AFYU01000150.
            Strain available from Rodolphe Barrangou, Ph.D., Danisco USA Inc.,
            3329 Agriculture Drive, Madison, WI 53716.
            This Lactobacillus casei Lpc-37 WGS draft sequence was annotated by
            the automated RAST service (http://rast.nmpdr.org/) with manual
            inspection and clean-up; pseudogene assignments were based solely
            on the available sequence and may include sequencing artifacts that
            do not necessarily reflect the biology of this organism.
            The organism was changed from 'Lactobacillus casei Lpc-37' to
            'Lactobacillus paracasei' in October 2018.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_000309785.1
            Current Name        :: Lactobacillus paracasei
            Previous Name       :: Lactobacillus casei Lpc-37
            Date Updated        :: 2018-10-11
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. TYPE genome for current name
            A1 Genome (subject) :: GCA_000159495.1
            A1 Name             :: Lactobacillus paracasei
            A1 ANI              :: 98.6628%
            A1 Query Coverage   :: 82.9%
            A1 Subject Coverage :: 88.35%
            Analysis 2 (A2)     :: Query vs. TYPE genome for previous name
            A2 Genome (subject) :: GCA_000829055.1
            A2 Name             :: Lactobacillus casei Lpc-37
            A2 ANI              :: 83.48058%
            A2 Query Coverage   :: 18.48%
            A2 Subject Coverage :: 19.24%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SeqMan NGen v. 2
            Genome Coverage       :: 133x
            Sequencing Technology :: 454 FLX-Titanium
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000309785.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:22:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,038
            CDSs (total)                      :: 2,965
            Genes (coding)                    :: 2,814
            CDSs (with protein)               :: 2,814
            Genes (RNA)                       :: 73
            rRNAs                             :: 5, 1, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 3 (5S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 151
            CDSs (without protein)            :: 151
            Pseudo Genes (ambiguous residues) :: 0 of 151
            Pseudo Genes (frameshifted)       :: 70 of 151
            Pseudo Genes (incomplete)         :: 86 of 151
            Pseudo Genes (internal stop)      :: 15 of 151
            Pseudo Genes (multiple problems)  :: 19 of 151
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3075253
                     /organism="Lacticaseibacillus paracasei"
                     /mol_type="genomic DNA"
                     /strain="Lpc-37"
                     /db_xref="taxon:1597"
WGS         AFYU01000001-AFYU01000150
WGS_SCAFLD  NZ_AFYU01000001-NZ_AFYU01000150
//
LOCUS       NZ_JBIXBO010000000   5979389 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1155, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXBO000000000
VERSION     NZ_JBIXBO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247313
            Assembly: GCF_045619745.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5979389)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXBO000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXBO000000000.  This version of the
            project (01) has the accession number NZ_JBIXBO010000000, and
            consists of sequences JBIXBO010000001-JBIXBO010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 235x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045619745.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:41:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,992
            CDSs (total)                      :: 5,870
            Genes (coding)                    :: 5,627
            CDSs (with protein)               :: 5,627
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 244
            CDSs (without protein)            :: 243
            Pseudo Genes (ambiguous residues) :: 0 of 244
            Pseudo Genes (frameshifted)       :: 139 of 244
            Pseudo Genes (incomplete)         :: 110 of 244
            Pseudo Genes (internal stop)      :: 23 of 244
            Pseudo Genes (multiple problems)  :: 28 of 244
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5979389
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1155"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXBO010000001-JBIXBO010000008
WGS_SCAFLD  NZ_JBIXBO010000001-NZ_JBIXBO010000008
//
LOCUS       NZ_AFYO01000000      3152126 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Lacticaseibacillus paracasei strain M36, whole genome shotgun
            sequencing project.
ACCESSION   NZ_AFYO00000000
VERSION     NZ_AFYO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02472000
            Assembly: GCF_000309665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus paracasei
  ORGANISM  Lacticaseibacillus paracasei
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 3152126)
  AUTHORS   Broadbent,J.R., Neeno-Eckwall,E.C., Stahl,B., Tandee,K., Cai,H.,
            Morovic,W., Horvath,P., Heidenreich,J., Perna,N.T., Barrangou,R.
            and Steele,J.L.
  TITLE     Analysis of the Lactobacillus casei supragenome and its influence
            in species evolution and lifestyle adaptation
  JOURNAL   BMC Genomics 13, 533 (2012)
   PUBMED   23035691
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3152126)
  AUTHORS   Steele,J., Neeno-Eckwall,E., Atkas,B., Heidenreich,J., Tandee,K.,
            Cai,H. and Broadbent,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-AUG-2011) Biotechnology Center, University of
            Wisconsin, 425 Henry Mall, Madison, WI 53706, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AFYO00000000.1.
            The Lacticaseibacillus paracasei whole genome shotgun (WGS) project
            has the project accession NZ_AFYO00000000.  This version of the
            project (01) has the accession number NZ_AFYO01000000, and consists
            of sequences AFYO01000001-AFYO01000078.
            Strain available from Dr. James Steele, Department of Food Science,
            125 Babcock Hall, 1605 Linden Drive, Madison, WI 53706-1565.
            This Lactobacillus casei M36 WGS draft sequence was annotated by
            the automated RAST service (http://rast.nmpdr.org/) with manual
            inspection and clean-up; pseudogene assignments were based solely
            on the available sequence and may include sequencing artifacts that
            do not necessarily reflect the biology of this organism.
            The organism was changed from 'Lactobacillus casei M36' to
            'Lactobacillus paracasei' in October 2018.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_000309665.1
            Current Name        :: Lactobacillus paracasei
            Previous Name       :: Lactobacillus casei M36
            Date Updated        :: 2018-10-11
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. TYPE genome for current name
            A1 Genome (subject) :: GCA_000829035.1
            A1 Name             :: Lactobacillus paracasei
            A1 ANI              :: 98.65202%
            A1 Query Coverage   :: 81.65%
            A1 Subject Coverage :: 85.28%
            Analysis 2 (A2)     :: Query vs. TYPE genome for previous name
            A2 Genome (subject) :: GCA_000829055.1
            A2 Name             :: Lactobacillus casei M36
            A2 ANI              :: 83.65655%
            A2 Query Coverage   :: 18.58%
            A2 Subject Coverage :: 19.84%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SeqMan NGen v. 2
            Genome Coverage       :: 19x
            Sequencing Technology :: 454 FLX-Titanium
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000309665.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:29:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,169
            CDSs (total)                      :: 3,094
            Genes (coding)                    :: 2,866
            CDSs (with protein)               :: 2,866
            Genes (RNA)                       :: 75
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 4 (16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 228
            CDSs (without protein)            :: 228
            Pseudo Genes (ambiguous residues) :: 0 of 228
            Pseudo Genes (frameshifted)       :: 118 of 228
            Pseudo Genes (incomplete)         :: 120 of 228
            Pseudo Genes (internal stop)      :: 12 of 228
            Pseudo Genes (multiple problems)  :: 21 of 228
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3152126
                     /organism="Lacticaseibacillus paracasei"
                     /mol_type="genomic DNA"
                     /strain="M36"
                     /isolation_source="cheese"
                     /db_xref="taxon:1597"
                     /geo_loc_name="USA: Wisconsin"
WGS         AFYO01000001-AFYO01000078
WGS_SCAFLD  NZ_AFYO01000001-NZ_AFYO01000078
//
LOCUS       NZ_AZHJ01000000      2592265 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Lacticaseibacillus rhamnosus LR231, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AZHJ00000000
VERSION     NZ_AZHJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02469586
            Assembly: GCF_000508405.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus rhamnosus LR231
  ORGANISM  Lacticaseibacillus rhamnosus LR231
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 2592265)
  AUTHORS   Ambalam,P., Pithva,S., Kothari,C., Kothari,R., Parmar,N.,
            Nathani,N.M., Koringa,P.G., Joshi,C.G., Dave,J.M. and Vyas,B.R.
  TITLE     Insight into the Draft Genome Sequence of Human Isolate
            Lactobacillus rhamnosus LR231, a Bacterium with Probiotic Potential
  JOURNAL   Genome Announc 2 (1), e00111-14 (2014)
   PUBMED   24578273
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2592265)
  AUTHORS   Ambalam,P., Pithva,S., Kothari,C., Kothari,R., Parmar,N.,
            Nathani,N.M., Koringa,P.G., Joshi,C.G., Dave,J.M. and Vyas,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-NOV-2013) Department of Biotechnology, Christ
            College, Rajkot, Gujarat 365007, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AZHJ00000000.1.
            The Lacticaseibacillus rhamnosus LR231 whole genome shotgun (WGS)
            project has the project accession NZ_AZHJ00000000.  This version of
            the project (01) has the accession number NZ_AZHJ01000000, and
            consists of sequences AZHJ01000001-AZHJ01000183.
            Bacteria and source DNA available from Dept. of Microbiology,
            Christ College, Rajkot 360005, India.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: GS Reference Mapper v. September 2013
            Genome Coverage       :: 107.0x
            Sequencing Technology :: Ion Torrent
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000508405.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:00:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,471
            CDSs (total)                      :: 2,401
            Genes (coding)                    :: 2,290
            CDSs (with protein)               :: 2,290
            Genes (RNA)                       :: 70
            rRNAs                             :: 5, 5, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 5 (5S)
            partial rRNAs                     :: 5, 3 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 83 of 111
            Pseudo Genes (incomplete)         :: 23 of 111
            Pseudo Genes (internal stop)      :: 9 of 111
            Pseudo Genes (multiple problems)  :: 4 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2592265
                     /organism="Lacticaseibacillus rhamnosus LR231"
                     /mol_type="genomic DNA"
                     /strain="LR231"
                     /isolation_source="human feces"
                     /db_xref="taxon:1408205"
                     /geo_loc_name="India"
WGS         AZHJ01000001-AZHJ01000183
WGS_SCAFLD  NZ_AZHJ01000001-NZ_AZHJ01000183
//
LOCUS       NZ_AUYM01000000      3019931 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Lacticaseibacillus paracasei strain 5b, whole genome shotgun
            sequencing project.
ACCESSION   NZ_AUYM00000000
VERSION     NZ_AUYM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02470054
            Assembly: GCF_000474615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus paracasei
  ORGANISM  Lacticaseibacillus paracasei
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 3019931)
  AUTHORS   Ladero,V., Herrero-Fresno,A., Martinez,N., Del Rio,B.,
            Linares,D.M., Fernandez,M., Martin,M.C. and Alvarez,M.A.
  TITLE     Genome Sequence Analysis of the Biogenic Amine-Degrading Strain
            Lactobacillus casei 5b
  JOURNAL   Genome Announc 2 (1), e01199-13 (2014)
   PUBMED   24435875
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3019931)
  AUTHORS   Ladero,V., Herrero-Fresno,A., del Rio,B., Linares,D.M.,
            Martinez,N., Martin,M.C., Fernandez,M. and Alvarez,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JUL-2013) Technology and Biotechnology of Dairy
            Products, Instituto de Productos Lacteos de Asturias (IPLA-CSIC),
            Paseo Rio Linares S/N, Villaviciosa, Asturias 33300, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AUYM00000000.1.
            The Lacticaseibacillus paracasei whole genome shotgun (WGS) project
            has the project accession NZ_AUYM00000000.  This version of the
            project (01) has the accession number NZ_AUYM01000000, and consists
            of sequences AUYM01000001-AUYM01000091.
            Annotation was manually curated based on annotation provided by the
            NCBI Prokaryotic Genome Annotation Pipeline (released 2013).
            Information about the Pipeline can be found here:
            http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Dr. Miguel A Alvarez.
            IPLA-CSI, Paseo Rio Linares S/N, Villaviciosa, Asturias 3300,
            Spain.
            The organism was changed from 'Lactobacillus casei 5b' to
            'Lactobacillus paracasei' in October 2018.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_000474615.1
            Current Name        :: Lactobacillus paracasei
            Previous Name       :: Lactobacillus casei 5b
            Date Updated        :: 2018-10-11
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. TYPE genome for current name
            A1 Genome (subject) :: GCA_000159495.1
            A1 Name             :: Lactobacillus paracasei
            A1 ANI              :: 98.68493%
            A1 Query Coverage   :: 83.14%
            A1 Subject Coverage :: 87.01%
            Analysis 2 (A2)     :: Query vs. TYPE genome for previous name
            A2 Genome (subject) :: GCA_000829055.1
            A2 Name             :: Lactobacillus casei 5b
            A2 ANI              :: 83.87328%
            A2 Query Coverage   :: 20.22%
            A2 Subject Coverage :: 20.68%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 02-Jan-2012
            Assembly Name         :: Lcasei5b_2.0
            Genome Coverage       :: 100.0x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000474615.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:58:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,982
            CDSs (total)                      :: 2,922
            Genes (coding)                    :: 2,837
            CDSs (with protein)               :: 2,837
            Genes (RNA)                       :: 60
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 85
            CDSs (without protein)            :: 85
            Pseudo Genes (ambiguous residues) :: 0 of 85
            Pseudo Genes (frameshifted)       :: 26 of 85
            Pseudo Genes (incomplete)         :: 53 of 85
            Pseudo Genes (internal stop)      :: 16 of 85
            Pseudo Genes (multiple problems)  :: 10 of 85
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3019931
                     /organism="Lacticaseibacillus paracasei"
                     /mol_type="genomic DNA"
                     /strain="5b"
                     /isolation_source="cheese"
                     /db_xref="taxon:1597"
WGS         AUYM01000001-AUYM01000091
WGS_SCAFLD  NZ_AUYM01000001-NZ_AUYM01000091
//
LOCUS       NZ_JBIXEE010000000   5652314 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1078, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXEE000000000
VERSION     NZ_JBIXEE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247245
            Assembly: GCF_045621125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5652314)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXEE000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXEE000000000.  This version of the
            project (01) has the accession number NZ_JBIXEE010000000, and
            consists of sequences JBIXEE010000001-JBIXEE010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 175x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045621125.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:51:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,650
            CDSs (total)                      :: 5,524
            Genes (coding)                    :: 5,375
            CDSs (with protein)               :: 5,375
            Genes (RNA)                       :: 126
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 149
            CDSs (without protein)            :: 149
            Pseudo Genes (ambiguous residues) :: 0 of 149
            Pseudo Genes (frameshifted)       :: 83 of 149
            Pseudo Genes (incomplete)         :: 67 of 149
            Pseudo Genes (internal stop)      :: 16 of 149
            Pseudo Genes (multiple problems)  :: 16 of 149
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5652314
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1078"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXEE010000001-JBIXEE010000008
WGS_SCAFLD  NZ_JBIXEE010000001-NZ_JBIXEE010000008
//
LOCUS       NZ_JBIXBM010000000   5953714 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1157, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXBM000000000
VERSION     NZ_JBIXBM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247315
            Assembly: GCF_045619685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5953714)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXBM000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXBM000000000.  This version of the
            project (01) has the accession number NZ_JBIXBM010000000, and
            consists of sequences JBIXBM010000001-JBIXBM010000014.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 486x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045619685.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:45:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,980
            CDSs (total)                      :: 5,856
            Genes (coding)                    :: 5,546
            CDSs (with protein)               :: 5,546
            Genes (RNA)                       :: 124
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 311
            CDSs (without protein)            :: 310
            Pseudo Genes (ambiguous residues) :: 0 of 311
            Pseudo Genes (frameshifted)       :: 194 of 311
            Pseudo Genes (incomplete)         :: 124 of 311
            Pseudo Genes (internal stop)      :: 29 of 311
            Pseudo Genes (multiple problems)  :: 35 of 311
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5953714
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1157"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXBM010000001-JBIXBM010000014
WGS_SCAFLD  NZ_JBIXBM010000001-NZ_JBIXBM010000014
//
LOCUS       NZ_JBIXDR010000000   5831045 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1095, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXDR000000000
VERSION     NZ_JBIXDR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247258
            Assembly: GCF_045620825.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5831045)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXDR000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXDR000000000.  This version of the
            project (01) has the accession number NZ_JBIXDR010000000, and
            consists of sequences JBIXDR010000001-JBIXDR010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 160x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045620825.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:44:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,729
            CDSs (total)                      :: 5,606
            Genes (coding)                    :: 5,410
            CDSs (with protein)               :: 5,410
            Genes (RNA)                       :: 123
            rRNAs                             :: 9, 8, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 9 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 196
            CDSs (without protein)            :: 196
            Pseudo Genes (ambiguous residues) :: 0 of 196
            Pseudo Genes (frameshifted)       :: 112 of 196
            Pseudo Genes (incomplete)         :: 94 of 196
            Pseudo Genes (internal stop)      :: 30 of 196
            Pseudo Genes (multiple problems)  :: 37 of 196
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5831045
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1095"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXDR010000001-JBIXDR010000005
WGS_SCAFLD  NZ_JBIXDR010000001-NZ_JBIXDR010000005
//
LOCUS       NZ_JAECUY010000000   5377054 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain ONE280, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAECUY000000000
VERSION     NZ_JAECUY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17023525
            Assembly: GCF_056172235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5377054)
  AUTHORS   Cardoso,B., Esposito,F., Sato,M.I., Brandao,C.J., Fuga,B.,
            Moura,Q., Fontana,H., Cerdeira,L. and Lincopan,N.
  TITLE     Draft genome of KPC-2-producing Klebsiella pneumoniae recovered
            from water sample in Brazil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5377054)
  AUTHORS   Cardoso,B., Esposito,F., Sato,M.I., Brandao,C.J., Fuga,B.,
            Moura,Q., Fontana,H., Cerdeira,L. and Lincopan,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-DEC-2020) Microbiology, University of Sao Paulo,
            Lineu Prestes Avenue, Sao Paulo, Sao Paulo 05508-900, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAECUY000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JAECUY000000000.  This version of the
            project (01) has the accession number NZ_JAECUY010000000, and
            consists of sequences JAECUY010000001-JAECUY010000095.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Uniciclyer v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 195.0x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172235.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:04:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,356
            CDSs (total)                      :: 5,309
            Genes (coding)                    :: 5,197
            CDSs (with protein)               :: 5,197
            Genes (RNA)                       :: 47
            rRNAs                             :: 1, 1 (5S, 16S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            tRNAs                             :: 39
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 112
            CDSs (without protein)            :: 112
            Pseudo Genes (ambiguous residues) :: 0 of 112
            Pseudo Genes (frameshifted)       :: 39 of 112
            Pseudo Genes (incomplete)         :: 75 of 112
            Pseudo Genes (internal stop)      :: 14 of 112
            Pseudo Genes (multiple problems)  :: 13 of 112
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5377054
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="ONE280"
                     /isolation_source="Water sample"
                     /db_xref="taxon:573"
                     /geo_loc_name="Brazil: Sao Paulo"
                     /lat_lon="23.454444 S 46.910000 W"
                     /collection_date="2017"
                     /collected_by="Maria Ines Zanoli Sato, Carlos Jesus
                     Brandao"
WGS         JAECUY010000001-JAECUY010000095
WGS_SCAFLD  NZ_JAECUY010000001-NZ_JAECUY010000095
//
LOCUS       NZ_JAECUS010000000   6031966 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain ONE246, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAECUS000000000
VERSION     NZ_JAECUS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17023248
            Assembly: GCF_056172135.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 6031966)
  AUTHORS   Morais,M., Fuga,B., Cardoso,B., Esposito,F., Fontana,H.,
            Cardenas,A. and Lincopan,N.
  TITLE     Draft genome of KPC-2-producing Klebsiella pneumoniae recovered
            from a human bloodstream infection sample in Brazil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6031966)
  AUTHORS   Morais,M., Fuga,B., Cardoso,B., Esposito,F., Fontana,H.,
            Cardenas,A. and Lincopan,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-DEC-2020) Microbiology, University of Sao Paulo,
            Lineu Prestes Avenue, Sao Paulo, Sao Paulo 05508-900, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAECUS000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JAECUS000000000.  This version of the
            project (01) has the accession number NZ_JAECUS010000000, and
            consists of sequences JAECUS010000001-JAECUS010000221.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Uniciclyer v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 195.3x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172135.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:00:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,109
            CDSs (total)                      :: 6,054
            Genes (coding)                    :: 5,869
            CDSs (with protein)               :: 5,869
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 40
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 185
            CDSs (without protein)            :: 185
            Pseudo Genes (ambiguous residues) :: 0 of 185
            Pseudo Genes (frameshifted)       :: 64 of 185
            Pseudo Genes (incomplete)         :: 126 of 185
            Pseudo Genes (internal stop)      :: 24 of 185
            Pseudo Genes (multiple problems)  :: 26 of 185
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6031966
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="ONE246"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Brazil: Pernambuco"
                     /lat_lon="8.05428 S 34.8813 W"
                     /collection_date="2014"
                     /collected_by="Marcia Morais"
WGS         JAECUS010000001-JAECUS010000221
WGS_SCAFLD  NZ_JAECUS010000001-NZ_JAECUS010000221
//
LOCUS       NZ_JAECVA010000000   5529153 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain ONE284, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAECVA000000000
VERSION     NZ_JAECVA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17023523
            Assembly: GCF_056172255.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5529153)
  AUTHORS   Garcia,D., Fernandes,M., Moura,Q., Fuga,B., Esposito,F. and
            Lincopan,N.
  TITLE     Draft genome of KPC-2-producing Klebsiella pneumoniae recovered
            from water sample in Brazil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5529153)
  AUTHORS   Garcia,D., Fernandes,M., Moura,Q., Fuga,B., Esposito,F. and
            Lincopan,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-DEC-2020) Microbiology, University of Sao Paulo,
            Lineu Prestes Avenue, Sao Paulo, Sao Paulo 05508-900, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAECVA000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JAECVA000000000.  This version of the
            project (01) has the accession number NZ_JAECVA010000000, and
            consists of sequences JAECVA010000001-JAECVA010000105.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Uniciclyer v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 226.8x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172255.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:58:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,587
            CDSs (total)                      :: 5,458
            Genes (coding)                    :: 5,323
            CDSs (with protein)               :: 5,323
            Genes (RNA)                       :: 129
            rRNAs                             :: 9, 12, 14 (5S, 16S, 23S)
            complete rRNAs                    :: 9 (5S)
            partial rRNAs                     :: 12, 14 (16S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 135
            CDSs (without protein)            :: 135
            Pseudo Genes (ambiguous residues) :: 0 of 135
            Pseudo Genes (frameshifted)       :: 41 of 135
            Pseudo Genes (incomplete)         :: 97 of 135
            Pseudo Genes (internal stop)      :: 13 of 135
            Pseudo Genes (multiple problems)  :: 13 of 135
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5529153
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="ONE284"
                     /isolation_source="Water sample"
                     /db_xref="taxon:573"
                     /geo_loc_name="Brazil: Sao Paulo"
                     /lat_lon="23.530767 S 46.748376 W"
                     /collection_date="2011"
                     /collected_by="Doroti Garcia"
WGS         JAECVA010000001-JAECVA010000105
WGS_SCAFLD  NZ_JAECVA010000001-NZ_JAECVA010000105
//
LOCUS       NZ_JBWDFO010000000   5765605 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella sp. 1432_KPC, whole genome shotgun sequencing project.
ACCESSION   NZ_JBWDFO000000000
VERSION     NZ_JBWDFO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54581377
            Assembly: GCF_056162685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella sp. 1432_KPC
  ORGANISM  Klebsiella sp. 1432_KPC
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 5765605)
  AUTHORS   Zhong,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-JAN-2026) Department of Clinical Laboratory, The
            Second Affiliated Hospital of Nanchang University, No. 1 Minde
            Road, Nanchang 330006, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWDFO000000000.1.
            The Klebsiella sp. 1432_KPC whole genome shotgun (WGS) project has
            the project accession NZ_JBWDFO000000000.  This version of the
            project (01) has the accession number NZ_JBWDFO010000000, and
            consists of sequences JBWDFO010000001-JBWDFO010000107.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162685.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:18:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,838
            CDSs (total)                      :: 5,744
            Genes (coding)                    :: 5,598
            CDSs (with protein)               :: 5,598
            Genes (RNA)                       :: 94
            rRNAs                             :: 1, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 146
            CDSs (without protein)            :: 146
            Pseudo Genes (ambiguous residues) :: 0 of 146
            Pseudo Genes (frameshifted)       :: 61 of 146
            Pseudo Genes (incomplete)         :: 91 of 146
            Pseudo Genes (internal stop)      :: 23 of 146
            Pseudo Genes (multiple problems)  :: 26 of 146
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5765605
                     /organism="Klebsiella sp. 1432_KPC"
                     /mol_type="genomic DNA"
                     /strain="1432_KPC"
                     /db_xref="taxon:3591642"
                     /geo_loc_name="China"
                     /collection_date="2024-10-25"
WGS         JBWDFO010000001-JBWDFO010000107
WGS_SCAFLD  NZ_JBWDFO010000001-NZ_JBWDFO010000107
//
LOCUS       NZ_JAECVG010000000   5290075 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain ONE264, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAECVG000000000
VERSION     NZ_JAECVG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17023633
            Assembly: GCF_056172375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5290075)
  AUTHORS   Cassettari,V., Santos,S., Moura,Q., Fernandes,M., Esposito,F. and
            Lincopan,N.
  TITLE     Draft genome of ESBL-producing Klebsiella pneumoniae recovered from
            a human bloodstream infection sample in Brazil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5290075)
  AUTHORS   Cassettari,V., Santos,S., Moura,Q., Fernandes,M., Esposito,F. and
            Lincopan,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-DEC-2020) Microbiology, University of Sao Paulo,
            Lineu Prestes Avenue, Sao Paulo, Sao Paulo 05508-900, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAECVG000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JAECVG000000000.  This version of the
            project (01) has the accession number NZ_JAECVG010000000, and
            consists of sequences JAECVG010000001-JAECVG010000071.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Uniciclyer v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 212.0x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172375.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:02:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,129
            CDSs (total)                      :: 5,080
            Genes (coding)                    :: 4,979
            CDSs (with protein)               :: 4,979
            Genes (RNA)                       :: 49
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 101
            CDSs (without protein)            :: 101
            Pseudo Genes (ambiguous residues) :: 0 of 101
            Pseudo Genes (frameshifted)       :: 45 of 101
            Pseudo Genes (incomplete)         :: 56 of 101
            Pseudo Genes (internal stop)      :: 12 of 101
            Pseudo Genes (multiple problems)  :: 11 of 101
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5290075
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="ONE264"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Brazil: Sao Paulo"
                     /lat_lon="23.563763 S 46.741412 W"
                     /collection_date="2015"
                     /collected_by="Silvia Santos"
WGS         JAECVG010000001-JAECVG010000071
WGS_SCAFLD  NZ_JAECVG010000001-NZ_JAECVG010000071
//
LOCUS       NZ_AQUZ01000000      9627810 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Kribbella catacumbae DSM 19601, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AQUZ00000000
VERSION     NZ_AQUZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02256503
            Assembly: GCF_000372465.1
KEYWORDS    WGS; GSC:MIGS:2.1; IMPROVED_HIGH_QUALITY_DRAFT; RefSeq.
SOURCE      Kribbella catacumbae DSM 19601
  ORGANISM  Kribbella catacumbae DSM 19601
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Kribbellaceae; Kribbella.
REFERENCE   1  (bases 1 to 9627810)
  AUTHORS   Kyrpides,N., Huntemann,M., Han,J., Chen,A., Mavromatis,K.,
            Markowitz,V., Palaniappan,K., Ivanova,N., Schaumberg,A., Pati,A.,
            Liolios,K., Nordberg,H.P., Cantor,M.N., Hua,S.X. and Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-APR-2013) DOE Joint Genome Institute, 2800 Mitchell
            Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AQUZ00000000.1.
            The Kribbella catacumbae DSM 19601 whole genome shotgun (WGS)
            project has the project accession NZ_AQUZ00000000.  This version of
            the project (01) has the accession number NZ_AQUZ01000000, and
            consists of sequences AQUZ01000001-AQUZ01000152.
            URL -- http://www.jgi.doe.gov
            JGI Project ID: 406059
            Source DNA and organism available from Hans-Peter Klenk at the
            German Collection of Microorganisms and Cell Cultures (DSMZ)
            (hans-peter.klenk@dsmz.de)
            Contacts: Nikos  Kyrpides (nckyrpides@lbl.gov)
                      Tanja Woyke (microbe@cuba.jgi-psf.org)
            Whole genome sequencing and draft assembly at JGI-PGF
            Annotation by JGI-PGF and JGI-ORNL
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376)
            Full annotations are available from IMG.
            
            ##MIGS-Data-START##
            investigation_type       :: bacteria_archaea
            project_name             :: Kribbella catacumbae DSM 19601
            collection_date          :: Missing
            lat_lon                  :: 41.858 12.510
            depth                    :: Missing
            alt_elev                 :: Missing
            country                  :: Italy
            num_replicons            :: Missing
            ref_biomaterial          :: DSM 19601
            biotic_relationship      :: Missing
            rel_to_oxygen            :: Aerobe
            isol_growth_condt        :: 18768610
            assembly                 :: Velvet v. 1.1.04; ALLPATHS v. r41043
            finishing_strategy       :: Missing
            environment              :: Missing
            trophic_level            :: Missing
            sequencing_meth          :: WGS
            GOLD Stamp ID            :: Gi11584
            Current Finishing Status :: Level 2: High-Quality Draft
            Type Strain              :: Yes
            Funding Program          :: DOE-CSP 2012
            Isolation Site           :: Tufaceous surfaces with whitish-grey
                                        patinas in the catacombs of St
                                        Callistus in Rome, Italy
            Temperature Range        :: Mesophile
            pH                       :: 5-10
            Gram Staining            :: Gram+
            Phenotypes               :: Catalase positive
            ##MIGS-Data-END##
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: Improved High-Quality Draft
            Current Finishing Status :: Improved High-Quality Draft
            Assembly Method          :: Velvet v. 1.1.04; ALLPATHS v. r41043
            Genome Coverage          :: Unknown
            Sequencing Technology    :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000372465.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:16:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 9,008
            CDSs (total)                      :: 8,943
            Genes (coding)                    :: 8,821
            CDSs (with protein)               :: 8,821
            Genes (RNA)                       :: 65
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 3, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 122
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 12 of 123
            Pseudo Genes (incomplete)         :: 113 of 123
            Pseudo Genes (internal stop)      :: 2 of 123
            Pseudo Genes (multiple problems)  :: 5 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9627810
                     /organism="Kribbella catacumbae DSM 19601"
                     /mol_type="genomic DNA"
                     /strain="DSM 19601"
                     /isolation_source="Tufaceous surfaces with whitish-grey
                     patinas in the catacombs of St Callistus in Rome, Italy"
                     /culture_collection="DSM:19601"
                     /type_material="type strain of Kribbella catacumbae"
                     /db_xref="taxon:1122138"
                     /geo_loc_name="Italy"
                     /lat_lon="41.858 N 12.510 E"
WGS         AQUZ01000001-AQUZ01000152
WGS_SCAFLD  NZ_AQUZ01000001-NZ_AQUZ01000152
//
LOCUS       NZ_JBWDFP010000000   5774919 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella sp. 421_KPC, whole genome shotgun sequencing project.
ACCESSION   NZ_JBWDFP000000000
VERSION     NZ_JBWDFP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54581376
            Assembly: GCF_056162705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella sp. 421_KPC
  ORGANISM  Klebsiella sp. 421_KPC
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 5774919)
  AUTHORS   Zhong,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-JAN-2026) Department of Clinical Laboratory, The
            Second Affiliated Hospital of Nanchang University, No. 1 Minde
            Road, Nanchang 330006, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWDFP000000000.1.
            The Klebsiella sp. 421_KPC whole genome shotgun (WGS) project has
            the project accession NZ_JBWDFP000000000.  This version of the
            project (01) has the accession number NZ_JBWDFP010000000, and
            consists of sequences JBWDFP010000001-JBWDFP010000141.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12x
            Sequencing Technology  :: 454; Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162705.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:17:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,865
            CDSs (total)                      :: 5,770
            Genes (coding)                    :: 5,623
            CDSs (with protein)               :: 5,623
            Genes (RNA)                       :: 95
            rRNAs                             :: 1, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 3 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 147
            CDSs (without protein)            :: 147
            Pseudo Genes (ambiguous residues) :: 0 of 147
            Pseudo Genes (frameshifted)       :: 58 of 147
            Pseudo Genes (incomplete)         :: 92 of 147
            Pseudo Genes (internal stop)      :: 27 of 147
            Pseudo Genes (multiple problems)  :: 27 of 147
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5774919
                     /organism="Klebsiella sp. 421_KPC"
                     /mol_type="genomic DNA"
                     /strain="421_KPC"
                     /db_xref="taxon:3591641"
                     /geo_loc_name="China"
                     /collection_date="2024-10-25"
WGS         JBWDFP010000001-JBWDFP010000141
WGS_SCAFLD  NZ_JBWDFP010000001-NZ_JBWDFP010000141
//
LOCUS       NZ_JYCS01000000      2889314 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Lacticaseibacillus rhamnosus strain CLS17, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JYCS00000000
VERSION     NZ_JYCS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03120606
            Assembly: GCF_000932035.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus rhamnosus (Lactobacillus rhamnosus)
  ORGANISM  Lacticaseibacillus rhamnosus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 2889314)
  AUTHORS   Kozhakhmetov,S.S., Kushugulova,A.R., Saduakhasova,S.A.,
            Shakhabayeva,G.S., Khassenbekova,Z.R., Molkenov,A.B., Kairov,U.E.,
            Issayeva,R.B., Nurgozhin,T.S. and Zhumadilov,Z.S.
  TITLE     Draft Genome Sequence of Lactobacillus rhamnosus CLS17
  JOURNAL   Genome Announc 3 (3), e00478-15 (2015)
   PUBMED   25977410
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2889314)
  AUTHORS   Kozhakhmetov,S., Saduakhasova,S., Kushugulova,A. and Kairov,U.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-FEB-2015) Genomic and Personalized Medicine, Center
            for Life Sciences, Nazarbayev University, 53 Kabanbay Batyr Avenue,
            Astana 010000, Kazakhstan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JYCS00000000.1.
            The Lacticaseibacillus rhamnosus whole genome shotgun (WGS) project
            has the project accession NZ_JYCS00000000.  This version of the
            project (01) has the accession number NZ_JYCS01000000, and consists
            of sequences JYCS01000001-JYCS01000071.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2013
            Assembly Method        :: GS De Novo Assembler v. 2.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 23.9x
            Sequencing Technology  :: 454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000932035.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:37:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,751
            CDSs (total)                      :: 2,694
            Genes (coding)                    :: 2,628
            CDSs (with protein)               :: 2,628
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 66
            CDSs (without protein)            :: 66
            Pseudo Genes (ambiguous residues) :: 0 of 66
            Pseudo Genes (frameshifted)       :: 36 of 66
            Pseudo Genes (incomplete)         :: 20 of 66
            Pseudo Genes (internal stop)      :: 14 of 66
            Pseudo Genes (multiple problems)  :: 3 of 66
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2889314
                     /organism="Lacticaseibacillus rhamnosus"
                     /mol_type="genomic DNA"
                     /strain="CLS17"
                     /isolation_source="stool sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:47715"
                     /geo_loc_name="Kazakhstan: Astana"
                     /collection_date="2012-04-04"
WGS         JYCS01000001-JYCS01000071
WGS_SCAFLD  NZ_JYCS01000001-NZ_JYCS01000071
//
LOCUS       NZ_JAECUR010000000   5525978 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain ONE245, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAECUR000000000
VERSION     NZ_JAECUR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17023246
            Assembly: GCF_056172115.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5525978)
  AUTHORS   Quaresma,A.J., Fuga,B., Cardoso,B., Fontana,H., Cardenas,A.,
            Esposito,F. and Lincopan,N.
  TITLE     Draft genome of KPC-2-producing Klebsiella pneumoniae recovered
            from a human sputum sample in Brazil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5525978)
  AUTHORS   Quaresma,A.J., Fuga,B., Cardoso,B., Fontana,H., Cardenas,A.,
            Esposito,F. and Lincopan,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-DEC-2020) Microbiology, University of Sao Paulo,
            Lineu Prestes Avenue, Sao Paulo, Sao Paulo 05508-900, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAECUR000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JAECUR000000000.  This version of the
            project (01) has the accession number NZ_JAECUR010000000, and
            consists of sequences JAECUR010000001-JAECUR010000196.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Uniciclyer v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 187.0x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172115.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:56:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,552
            CDSs (total)                      :: 5,510
            Genes (coding)                    :: 5,372
            CDSs (with protein)               :: 5,372
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 34
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 138
            CDSs (without protein)            :: 138
            Pseudo Genes (ambiguous residues) :: 0 of 138
            Pseudo Genes (frameshifted)       :: 47 of 138
            Pseudo Genes (incomplete)         :: 92 of 138
            Pseudo Genes (internal stop)      :: 13 of 138
            Pseudo Genes (multiple problems)  :: 13 of 138
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5525978
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="ONE245"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Brazil: Para"
                     /lat_lon="1.457778 S 48.465556 W"
                     /collection_date="2019"
                     /collected_by="Ana Judith P.G. Quaresma"
WGS         JAECUR010000001-JAECUR010000196
WGS_SCAFLD  NZ_JAECUR010000001-NZ_JAECUR010000196
//
LOCUS       NZ_JBRWNL010000000   5987456 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella variicola strain PE271011, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWNL000000000
VERSION     NZ_JBRWNL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385108
            Assembly: GCF_056161845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella variicola
  ORGANISM  Klebsiella variicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5987456)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5987456)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWNL000000000.1.
            The Klebsiella variicola whole genome shotgun (WGS) project has the
            project accession NZ_JBRWNL000000000.  This version of the project
            (01) has the accession number NZ_JBRWNL010000000, and consists of
            sequences JBRWNL010000001-JBRWNL010000088.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161845.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:20:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,973
            CDSs (total)                      :: 5,897
            Genes (coding)                    :: 5,738
            CDSs (with protein)               :: 5,738
            Genes (RNA)                       :: 76
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 159
            CDSs (without protein)            :: 159
            Pseudo Genes (ambiguous residues) :: 0 of 159
            Pseudo Genes (frameshifted)       :: 55 of 159
            Pseudo Genes (incomplete)         :: 111 of 159
            Pseudo Genes (internal stop)      :: 32 of 159
            Pseudo Genes (multiple problems)  :: 32 of 159
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5987456
                     /organism="Klebsiella variicola"
                     /mol_type="genomic DNA"
                     /strain="PE271011"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:244366"
                     /geo_loc_name="China"
                     /lat_lon="39.982762 N 116.360012 E"
                     /collection_date="2023-03-05"
                     /collected_by="Ping Yang"
                     /genotype="ST3927"
WGS         JBRWNL010000001-JBRWNL010000088
WGS_SCAFLD  NZ_JBRWNL010000001-NZ_JBRWNL010000088
//
LOCUS       NZ_LAZE01000000      2966480 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Lacticaseibacillus rhamnosus strain CNCM-I-3698, whole genome
            shotgun sequencing project.
ACCESSION   NZ_LAZE00000000
VERSION     NZ_LAZE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03465328
            Assembly: GCF_001005625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus rhamnosus (Lactobacillus rhamnosus)
  ORGANISM  Lacticaseibacillus rhamnosus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 2966480)
  AUTHORS   Tareb,R., Bernardeau,M. and Vernoux,J.P.
  TITLE     Genome Sequence of Lactobacillus rhamnosus Strain CNCM I-3698
  JOURNAL   Genome Announc 3 (3), e00582-15 (2015)
   PUBMED   26067954
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2966480)
  AUTHORS   Tareb,R., Bernardeau,M. and Vernoux,J.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2015) Equipe QAlEA, E.A. 4651, University of Caen
            Lower Normandy, Esplanade de la Paix, Caen 14032, France
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LAZE00000000.1.
            The Lacticaseibacillus rhamnosus whole genome shotgun (WGS) project
            has the project accession NZ_LAZE00000000.  This version of the
            project (01) has the accession number NZ_LAZE01000000, and consists
            of sequences LAZE01000001-LAZE01000071.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date             :: 19-DEC-2011
            Assembly Method           :: CLC Genomics Workbench v. 5.0
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: GCA_000026505.1
            Genome Coverage           :: 100.0x
            Sequencing Technology     :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001005625.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:42:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,813
            CDSs (total)                      :: 2,755
            Genes (coding)                    :: 2,680
            CDSs (with protein)               :: 2,680
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 52
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 25 of 75
            Pseudo Genes (incomplete)         :: 40 of 75
            Pseudo Genes (internal stop)      :: 20 of 75
            Pseudo Genes (multiple problems)  :: 10 of 75
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2966480
                     /organism="Lacticaseibacillus rhamnosus"
                     /mol_type="genomic DNA"
                     /strain="CNCM-I-3698"
                     /isolation_source="alpine goat rumen"
                     /host="Capra hircus"
                     /db_xref="taxon:47715"
                     /geo_loc_name="France"
                     /collection_date="1997-01-01"
WGS         LAZE01000001-LAZE01000071
WGS_SCAFLD  NZ_LAZE01000001-NZ_LAZE01000071
//
LOCUS       NZ_JBRWNK010000000   5992422 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella variicola strain PE281072, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWNK000000000
VERSION     NZ_JBRWNK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52385109
            Assembly: GCF_056161825.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella variicola
  ORGANISM  Klebsiella variicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5992422)
  AUTHORS   Wu,Z., Ma,Y., Zheng,J., Yang,P., Lu,M., Yipeng,D. and Shen,N.
  TITLE     Risk factors, clinical outcomes of patients with
            Ceftazidime/Avibactam-resistant carbapenem-Resistant Klebsiella
            pneumoniae infection and its potential resistant mechanisms
  JOURNAL   J Infect Public Health 19 (4), 103161 (2026)
   PUBMED   41637932
REFERENCE   2  (bases 1 to 5992422)
  AUTHORS   Ma,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-OCT-2025) Department of Pulmonary and Critical Care
            Medicine, Peking University Third Hospital, Peking University -
            Third School of Clinical Medicine: Peking University Third
            Hospital, 49 North Garden Rd., Haidian District Beijing, beijing,
            beijing 100191, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWNK000000000.1.
            The Klebsiella variicola whole genome shotgun (WGS) project has the
            project accession NZ_JBRWNK000000000.  This version of the project
            (01) has the accession number NZ_JBRWNK010000000, and consists of
            sequences JBRWNK010000001-JBRWNK010000088.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161825.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:26:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,977
            CDSs (total)                      :: 5,898
            Genes (coding)                    :: 5,736
            CDSs (with protein)               :: 5,736
            Genes (RNA)                       :: 79
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 162
            CDSs (without protein)            :: 162
            Pseudo Genes (ambiguous residues) :: 0 of 162
            Pseudo Genes (frameshifted)       :: 55 of 162
            Pseudo Genes (incomplete)         :: 114 of 162
            Pseudo Genes (internal stop)      :: 32 of 162
            Pseudo Genes (multiple problems)  :: 32 of 162
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5992422
                     /organism="Klebsiella variicola"
                     /mol_type="genomic DNA"
                     /strain="PE281072"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:244366"
                     /geo_loc_name="China"
                     /lat_lon="39.982763 N 116.360012 E"
                     /collection_date="2023-03-17"
                     /collected_by="Ping Yang"
                     /genotype="ST3927"
WGS         JBRWNK010000001-JBRWNK010000088
WGS_SCAFLD  NZ_JBRWNK010000001-NZ_JBRWNK010000088
//
LOCUS       NZ_JAECVE010000000   5410236 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain ONE257, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAECVE000000000
VERSION     NZ_JAECVE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17023631
            Assembly: GCF_056172335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5410236)
  AUTHORS   Lincopan,N., Fernandes,M., Moura,Q., Fuga,B., Esposito,F. and
            Mamizuka,E.M.
  TITLE     Draft genome of IMP-1-producing Klebsiella pneumoniae recovered
            from a human bloodstream infection sample in Brazil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5410236)
  AUTHORS   Lincopan,N., Fernandes,M., Moura,Q., Fuga,B., Esposito,F. and
            Mamizuka,E.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-DEC-2020) Microbiology, University of Sao Paulo,
            Lineu Prestes Avenue, Sao Paulo, Sao Paulo 05508-900, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAECVE000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JAECVE000000000.  This version of the
            project (01) has the accession number NZ_JAECVE010000000, and
            consists of sequences JAECVE010000001-JAECVE010000102.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Uniciclyer v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 197.0x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172335.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:52:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,403
            CDSs (total)                      :: 5,310
            Genes (coding)                    :: 5,189
            CDSs (with protein)               :: 5,189
            Genes (RNA)                       :: 93
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 76
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 121
            CDSs (without protein)            :: 121
            Pseudo Genes (ambiguous residues) :: 0 of 121
            Pseudo Genes (frameshifted)       :: 54 of 121
            Pseudo Genes (incomplete)         :: 70 of 121
            Pseudo Genes (internal stop)      :: 19 of 121
            Pseudo Genes (multiple problems)  :: 17 of 121
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5410236
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="ONE257"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Brazil: Sao Paulo"
                     /lat_lon="23.557077 S 46.669821 W"
                     /collection_date="2003"
                     /collected_by="Nilton Lincopan"
WGS         JAECVE010000001-JAECVE010000102
WGS_SCAFLD  NZ_JAECVE010000001-NZ_JAECVE010000102
//
LOCUS       NZ_JAECVB010000000   5311340 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain ONE250, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAECVB000000000
VERSION     NZ_JAECVB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17023567
            Assembly: GCF_056172295.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5311340)
  AUTHORS   Lopes,R., Moura,Q., Fernandes,M., Esposito,F., Cardenas,A.,
            Cardoso,B. and Lincopan,N.
  TITLE     Draft genome of OXA-1-producing Klebsiella pneumoniae recovered
            from lettuce leaf sample in Brazil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5311340)
  AUTHORS   Lopes,R., Moura,Q., Fernandes,M., Esposito,F., Cardenas,A.,
            Cardoso,B. and Lincopan,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-DEC-2020) Microbiology, University of Sao Paulo,
            Lineu Prestes Avenue, Sao Paulo, Sao Paulo 05508-900, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAECVB000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JAECVB000000000.  This version of the
            project (01) has the accession number NZ_JAECVB010000000, and
            consists of sequences JAECVB010000001-JAECVB010000020.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Uniciclyer v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 329.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172295.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:00:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,199
            CDSs (total)                      :: 5,095
            Genes (coding)                    :: 4,982
            CDSs (with protein)               :: 4,982
            Genes (RNA)                       :: 104
            rRNAs                             :: 6, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 113
            CDSs (without protein)            :: 113
            Pseudo Genes (ambiguous residues) :: 0 of 113
            Pseudo Genes (frameshifted)       :: 44 of 113
            Pseudo Genes (incomplete)         :: 67 of 113
            Pseudo Genes (internal stop)      :: 18 of 113
            Pseudo Genes (multiple problems)  :: 14 of 113
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5311340
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="ONE250"
                     /isolation_source="Lettuce leaf sample"
                     /db_xref="taxon:573"
                     /geo_loc_name="Brazil: Sao Paulo"
                     /lat_lon="23.3965 S 46.3214 W"
                     /collection_date="2016"
                     /collected_by="Ralf Lopes"
WGS         JAECVB010000001-JAECVB010000020
WGS_SCAFLD  NZ_JAECVB010000001-NZ_JAECVB010000020
//
LOCUS       NZ_SJJZ01000000      8785001 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Kribbella soli strain KCTC 29219, whole genome shotgun sequencing
            project.
ACCESSION   NZ_SJJZ00000000
VERSION     NZ_SJJZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10963504
            Assembly: GCF_004331345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kribbella soli
  ORGANISM  Kribbella soli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Kribbellaceae; Kribbella.
REFERENCE   1  (bases 1 to 8785001)
  AUTHORS   Curtis,S.M., Norton,I., Everest,G.J. and Meyers,P.R.
  TITLE     Kribbella capetownensis sp. nov. and Kribbella speibonae sp. nov.,
            isolated from soil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8785001)
  AUTHORS   Meyers,P.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-FEB-2019) Molecular & Cell Biology, University of
            Cape Town, University Avenue, Cape Town 7700, South Africa
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SJJZ00000000.1.
            The Kribbella soli whole genome shotgun (WGS) project has the
            project accession NZ_SJJZ00000000.  This version of the project
            (01) has the accession number NZ_SJJZ01000000, and consists of
            sequences SJJZ01000001-SJJZ01000010.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2018
            Assembly Method        :: SPAdes v. 3.6.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 44.59 x
            Sequencing Technology  :: Illumina HiSeq 4000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004331345.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:19:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 8,506
            CDSs (total)                      :: 8,442
            Genes (coding)                    :: 8,409
            CDSs (with protein)               :: 8,409
            Genes (RNA)                       :: 64
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 33
            CDSs (without protein)            :: 33
            Pseudo Genes (ambiguous residues) :: 0 of 33
            Pseudo Genes (frameshifted)       :: 3 of 33
            Pseudo Genes (incomplete)         :: 32 of 33
            Pseudo Genes (internal stop)      :: 0 of 33
            Pseudo Genes (multiple problems)  :: 2 of 33
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8785001
                     /organism="Kribbella soli"
                     /mol_type="genomic DNA"
                     /strain="KCTC 29219"
                     /isolation_source="Soil"
                     /culture_collection="KCTC:29219"
                     /type_material="type strain of Kribbella soli"
                     /db_xref="taxon:1124743"
                     /geo_loc_name="Russia: Moscow"
WGS         SJJZ01000001-SJJZ01000010
WGS_SCAFLD  NZ_SJJZ01000001-NZ_SJJZ01000010
//
LOCUS       NZ_SJKD01000000      8831527 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Kribbella capetownensis strain YM53, whole genome shotgun
            sequencing project.
ACCESSION   NZ_SJKD00000000
VERSION     NZ_SJKD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10963500
            Assembly: GCF_004331485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kribbella capetownensis
  ORGANISM  Kribbella capetownensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Kribbellaceae; Kribbella.
REFERENCE   1  (bases 1 to 8831527)
  AUTHORS   Curtis,S.M., Norton,I., Everest,G.J. and Meyers,P.R.
  TITLE     Kribbella capetownensis sp. nov. and Kribbella speibonae sp. nov.,
            isolated from soil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8831527)
  AUTHORS   Meyers,P.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-FEB-2019) Molecular & Cell Biology, University of
            Cape Town, University Avenue, Cape Town 7700, South Africa
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SJKD00000000.1.
            The Kribbella capetownensis whole genome shotgun (WGS) project has
            the project accession NZ_SJKD00000000.  This version of the project
            (01) has the accession number NZ_SJKD01000000, and consists of
            sequences SJKD01000001-SJKD01000031.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2018
            Assembly Method        :: SPAdes v. 3.6.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 45.18 x
            Sequencing Technology  :: Illumina HiSeq 4000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004331485.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:19:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 8,678
            CDSs (total)                      :: 8,619
            Genes (coding)                    :: 8,548
            CDSs (with protein)               :: 8,548
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 72
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 72
            Pseudo Genes (frameshifted)       :: 8 of 72
            Pseudo Genes (incomplete)         :: 64 of 72
            Pseudo Genes (internal stop)      :: 3 of 72
            Pseudo Genes (multiple problems)  :: 4 of 72
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8831527
                     /organism="Kribbella capetownensis"
                     /mol_type="genomic DNA"
                     /strain="YM53"
                     /isolation_source="Soil"
                     /type_material="type material of Kribbella capetownensis"
                     /db_xref="taxon:1572659"
                     /geo_loc_name="South Africa: Cape Town, Upper Campus of
                     University of Cape Town"
                     /lat_lon="33.9577 S 18.4612 E"
                     /collection_date="2008"
WGS         SJKD01000001-SJKD01000031
WGS_SCAFLD  NZ_SJKD01000001-NZ_SJKD01000031
//
LOCUS       NZ_JAECUW010000000   5466930 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain ONE267, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAECUW000000000
VERSION     NZ_JAECUW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17023527
            Assembly: GCF_056172215.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5466930)
  AUTHORS   Rodrigues,M., Sellera,F., Moura,Q., Esposito,F., Cardoso,B.,
            Fontana,H., Cardenas,A. and Lincopan,N.
  TITLE     Draft genome of ESBL-producing Klebsiella pneumoniae recovered from
            household swab sample in Brazil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5466930)
  AUTHORS   Rodrigues,M., Sellera,F., Moura,Q., Esposito,F., Cardoso,B.,
            Fontana,H., Cardenas,A. and Lincopan,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-DEC-2020) Microbiology, University of Sao Paulo,
            Lineu Prestes Avenue, Sao Paulo, Sao Paulo 05508-900, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAECUW000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JAECUW000000000.  This version of the
            project (01) has the accession number NZ_JAECUW010000000, and
            consists of sequences JAECUW010000001-JAECUW010000095.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Uniciclyer v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 219.3x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172215.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:01:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,380
            CDSs (total)                      :: 5,318
            Genes (coding)                    :: 5,204
            CDSs (with protein)               :: 5,204
            Genes (RNA)                       :: 62
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 114
            CDSs (without protein)            :: 114
            Pseudo Genes (ambiguous residues) :: 0 of 114
            Pseudo Genes (frameshifted)       :: 51 of 114
            Pseudo Genes (incomplete)         :: 64 of 114
            Pseudo Genes (internal stop)      :: 15 of 114
            Pseudo Genes (multiple problems)  :: 13 of 114
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5466930
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="ONE267"
                     /isolation_source="Household swab sample"
                     /db_xref="taxon:573"
                     /geo_loc_name="Brazil: Sao Paulo"
                     /lat_lon="23.9991 S 46.4133 W"
                     /collection_date="2017"
                     /collected_by="Miriam Fernandes, Fabio Sellera"
WGS         JAECUW010000001-JAECUW010000095
WGS_SCAFLD  NZ_JAECUW010000001-NZ_JAECUW010000095
//
LOCUS       NZ_JBHPNM010000000   5694459 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella variicola strain PSRZ2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBHPNM000000000
VERSION     NZ_JBHPNM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43932746
            Assembly: GCF_056171875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella variicola
  ORGANISM  Klebsiella variicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5694459)
  AUTHORS   Panda,A., De Mandal,S. and Singh,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-SEP-2024) Biotechnology, Yeungnam university,
            Yeungnam university, Deghu, Gyeongsan 712749, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBHPNM000000000.1.
            The Klebsiella variicola whole genome shotgun (WGS) project has the
            project accession NZ_JBHPNM000000000.  This version of the project
            (01) has the accession number NZ_JBHPNM010000000, and consists of
            sequences JBHPNM010000001-JBHPNM010000035.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 122.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056171875.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:50:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,567
            CDSs (total)                      :: 5,471
            Genes (coding)                    :: 5,345
            CDSs (with protein)               :: 5,345
            Genes (RNA)                       :: 96
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 79
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 126
            CDSs (without protein)            :: 126
            Pseudo Genes (ambiguous residues) :: 0 of 126
            Pseudo Genes (frameshifted)       :: 51 of 126
            Pseudo Genes (incomplete)         :: 66 of 126
            Pseudo Genes (internal stop)      :: 30 of 126
            Pseudo Genes (multiple problems)  :: 19 of 126
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5694459
                     /organism="Klebsiella variicola"
                     /mol_type="genomic DNA"
                     /strain="PSRZ2"
                     /isolation_source="soil"
                     /db_xref="taxon:244366"
                     /geo_loc_name="India: Chhattisgarh, Surguja, Mainpat,
                     vill. Rajkheta"
                     /collection_date="2024-04-12"
WGS         JBHPNM010000001-JBHPNM010000035
WGS_SCAFLD  NZ_JBHPNM010000001-NZ_JBHPNM010000035
//
LOCUS       NZ_SJKA01000000      8891727 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Kribbella sindirgiensis strain DSM 27082, whole genome shotgun
            sequencing project.
ACCESSION   NZ_SJKA00000000
VERSION     NZ_SJKA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10963503
            Assembly: GCF_004331435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kribbella sindirgiensis
  ORGANISM  Kribbella sindirgiensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Kribbellaceae; Kribbella.
REFERENCE   1  (bases 1 to 8891727)
  AUTHORS   Curtis,S.M., Norton,I., Everest,G.J. and Meyers,P.R.
  TITLE     Kribbella capetownensis sp. nov. and Kribbella speibonae sp. nov.,
            isolated from soil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8891727)
  AUTHORS   Meyers,P.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-FEB-2019) Molecular & Cell Biology, University of
            Cape Town, University Avenue, Cape Town 7700, South Africa
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SJKA00000000.1.
            The Kribbella sindirgiensis whole genome shotgun (WGS) project has
            the project accession NZ_SJKA00000000.  This version of the project
            (01) has the accession number NZ_SJKA01000000, and consists of
            sequences SJKA01000001-SJKA01000054.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2018
            Assembly Method        :: SPAdes v. 3.6.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 45.34 x
            Sequencing Technology  :: Illumina HiSeq 4000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004331435.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:18:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 8,624
            CDSs (total)                      :: 8,559
            Genes (coding)                    :: 8,507
            CDSs (with protein)               :: 8,507
            Genes (RNA)                       :: 65
            rRNAs                             :: 1, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 53
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 53
            Pseudo Genes (frameshifted)       :: 7 of 53
            Pseudo Genes (incomplete)         :: 48 of 53
            Pseudo Genes (internal stop)      :: 0 of 53
            Pseudo Genes (multiple problems)  :: 3 of 53
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8891727
                     /organism="Kribbella sindirgiensis"
                     /mol_type="genomic DNA"
                     /strain="DSM 27082"
                     /isolation_source="Soil"
                     /culture_collection="DSM:27082"
                     /type_material="type strain of Kribbella sindirgiensis"
                     /db_xref="taxon:1124744"
                     /geo_loc_name="Turkey: Sindirgi, Caygoren Dam lakeside"
                     /lat_lon="39.2471 N 28.2114 E"
WGS         SJKA01000001-SJKA01000054
WGS_SCAFLD  NZ_SJKA01000001-NZ_SJKA01000054
//
LOCUS       NZ_CBDBYU010000000   5698921 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella variicola subsp. variicola strain CIP53.24 isolate
            CIP53.24, whole genome shotgun sequencing project.
ACCESSION   NZ_CBDBYU000000000
VERSION     NZ_CBDBYU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117660690
            Assembly: GCF_965212665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella variicola subsp. variicola
  ORGANISM  Klebsiella variicola subsp. variicola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5698921)
  AUTHORS   Palma,F., Chouali,H., Bouchier,C., Chesneau,O., Muhle,E.,
            Clermont,D. and Criscuolo,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAR-2025) CIP, 25-28, rue du Docteur Roux, 75015
            Paris, France
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBDBYU000000000.1.
            The Klebsiella variicola subsp. variicola whole genome shotgun
            (WGS) project has the project accession NZ_CBDBYU000000000.  This
            version of the project (01) has the accession number
            NZ_CBDBYU010000000, and consists of sequences
            CBDBYU010000001-CBDBYU010000088.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_965212665.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:57:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,697
            CDSs (total)                      :: 5,588
            Genes (coding)                    :: 5,363
            CDSs (with protein)               :: 5,363
            Genes (RNA)                       :: 109
            rRNAs                             :: 7, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 225
            CDSs (without protein)            :: 225
            Pseudo Genes (ambiguous residues) :: 0 of 225
            Pseudo Genes (frameshifted)       :: 58 of 225
            Pseudo Genes (incomplete)         :: 173 of 225
            Pseudo Genes (internal stop)      :: 26 of 225
            Pseudo Genes (multiple problems)  :: 27 of 225
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5698921
                     /organism="Klebsiella variicola subsp. variicola"
                     /mol_type="genomic DNA"
                     /strain="CIP53.24"
                     /isolate="CIP53.24"
                     /sub_species="variicola"
                     /db_xref="taxon:2590157"
WGS         CBDBYU010000001-CBDBYU010000088
WGS_SCAFLD  NZ_CBDBYU010000001-NZ_CBDBYU010000088
//
LOCUS       NZ_QAZE01000000      2782240 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Lacticaseibacillus casei strain DS13_13, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QAZE00000000
VERSION     NZ_QAZE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05942028
            Assembly: GCF_003052855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus casei
  ORGANISM  Lacticaseibacillus casei
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 2782240)
  AUTHORS   Gangiredla,J., Barnaba,T.J., Mammel,M.K., Lacher,D.W., Elkins,C.A.,
            Lampel,K.A., Whitehouse,C.A. and Tartera,C.
  TITLE     Fifty-Six Draft Genome Sequences of 10 Lactobacillus Species from
            22 Commercial Dietary Supplements
  JOURNAL   Genome Announc 6 (26), e00621-18 (2018)
   PUBMED   29954914
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2782240)
  AUTHORS   Gangiredla,J., Barnaba,T.J., Mammel,M.K., Lacher,D.W., Elkins,C.A.,
            Lampel,K.A., Whitehouse,C.A. and Tartera,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2018) Department of Molecular Biology, USFDA,
            8301 Muirkirk Road, Laurel, MD 20708, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QAZE00000000.1.
            The Lacticaseibacillus casei whole genome shotgun (WGS) project has
            the project accession NZ_QAZE00000000.  This version of the project
            (01) has the accession number NZ_QAZE01000000, and consists of
            sequences QAZE01000001-QAZE01000161.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            The organism was changed from 'Lactobacillus zeae' to
            'Lactobacillus casei' in October 2018.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_003052855.1
            Current Name        :: Lactobacillus casei
            Previous Name       :: Lactobacillus zeae
            Date Updated        :: 2018-10-11
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. TYPE genome for current name
            A1 Genome (subject) :: GCA_000829055.1
            A1 Name             :: Lactobacillus casei
            A1 ANI              :: 99.99718%
            A1 Query Coverage   :: 99.35%
            A1 Subject Coverage :: 93.61%
            Analysis 2 (A2)     :: Query vs. UNKNOWN genome for previous name
            A2 Genome (subject) :: GCA_001433745.1
            A2 Name             :: Lactobacillus zeae
            A2 ANI              :: 94.71629%
            A2 Query Coverage   :: 87.49%
            A2 Subject Coverage :: 78.21%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 127.9x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003052855.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:56:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,738
            CDSs (total)                      :: 2,675
            Genes (coding)                    :: 2,498
            CDSs (with protein)               :: 2,498
            Genes (RNA)                       :: 63
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 177
            CDSs (without protein)            :: 177
            Pseudo Genes (ambiguous residues) :: 0 of 177
            Pseudo Genes (frameshifted)       :: 66 of 177
            Pseudo Genes (incomplete)         :: 77 of 177
            Pseudo Genes (internal stop)      :: 40 of 177
            Pseudo Genes (multiple problems)  :: 6 of 177
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2782240
                     /organism="Lacticaseibacillus casei"
                     /mol_type="genomic DNA"
                     /strain="DS13_13"
                     /isolation_source="Commercial dietary supplements"
                     /host="Homo sapiens"
                     /db_xref="taxon:1582"
                     /geo_loc_name="USA: MD"
                     /collection_date="2016-05-07"
WGS         QAZE01000001-QAZE01000161
WGS_SCAFLD  NZ_QAZE01000001-NZ_QAZE01000161
//
LOCUS       NZ_SSUD01000000      5705343 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae subsp. pneumoniae strain 48, whole genome
            shotgun sequencing project.
ACCESSION   NZ_SSUD00000000
VERSION     NZ_SSUD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11388459
            Assembly: GCF_004802905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae subsp. pneumoniae
  ORGANISM  Klebsiella pneumoniae subsp. pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5705343)
  AUTHORS   Fouts,D., Sutton,G., Singh,I. and Nguyen,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2019) Informatics Core Services, JCVI, 9605
            Medical Center Drive, Rockville, MD 20850, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SSUD00000000.1.
            The Klebsiella pneumoniae subsp. pneumoniae whole genome shotgun
            (WGS) project has the project accession NZ_SSUD00000000.  This
            version of the project (01) has the accession number
            NZ_SSUD01000000, and consists of sequences
            SSUD01000001-SSUD01000124.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 181.31x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004802905.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:12:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,699
            CDSs (total)                      :: 5,619
            Genes (coding)                    :: 5,451
            CDSs (with protein)               :: 5,451
            Genes (RNA)                       :: 80
            rRNAs                             :: 1, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 4 (16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 168
            CDSs (without protein)            :: 168
            Pseudo Genes (ambiguous residues) :: 0 of 168
            Pseudo Genes (frameshifted)       :: 68 of 168
            Pseudo Genes (incomplete)         :: 101 of 168
            Pseudo Genes (internal stop)      :: 26 of 168
            Pseudo Genes (multiple problems)  :: 22 of 168
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5705343
                     /organism="Klebsiella pneumoniae subsp. pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="48"
                     /host="Homo sapiens"
                     /sub_species="pneumoniae"
                     /db_xref="taxon:72407"
                     /geo_loc_name="Egypt: Tanta"
                     /lat_lon="30.7865 N 31.0004 E"
WGS         SSUD01000001-SSUD01000124
WGS_SCAFLD  NZ_SSUD01000001-NZ_SSUD01000124
//
LOCUS       NZ_NOXN01000000      2661638 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Lacticaseibacillus chiayiensis strain BCRC 18859, whole genome
            shotgun sequencing project.
ACCESSION   NZ_NOXN00000000
VERSION     NZ_NOXN00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07415621
            Assembly: GCF_004123955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus chiayiensis
  ORGANISM  Lacticaseibacillus chiayiensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 2661638)
  AUTHORS   Huang,C.H., Liou,J.S., Lee,A.Y., Tseng,M., Miyashita,M., Huang,L.
            and Watanabe,K.
  TITLE     Polyphasic characterization of a novel species in the Lactobacillus
            casei group from cow manure of Taiwan: Description of L.
            chiayiensis sp. nov
  JOURNAL   Syst Appl Microbiol 41 (4), 270-278 (2018)
   PUBMED   29456028
REFERENCE   2  (bases 1 to 2661638)
  AUTHORS   Huang,C.-H.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JUL-2017) BCRC, FIRDI, 331 Shih-Pin Road, Hsinchu
            30062, Taiwan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NOXN00000000.1.
            The Lacticaseibacillus chiayiensis whole genome shotgun (WGS)
            project has the project accession NZ_NOXN00000000.  This version of
            the project (01) has the accession number NZ_NOXN01000000, and
            consists of sequences NOXN01000001-NOXN01000135.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MIRA v. 2.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 119.0x
            Sequencing Technology  :: IonTorrent
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004123955.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:57:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,592
            CDSs (total)                      :: 2,539
            Genes (coding)                    :: 2,211
            CDSs (with protein)               :: 2,211
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 328
            CDSs (without protein)            :: 328
            Pseudo Genes (ambiguous residues) :: 0 of 328
            Pseudo Genes (frameshifted)       :: 281 of 328
            Pseudo Genes (incomplete)         :: 42 of 328
            Pseudo Genes (internal stop)      :: 23 of 328
            Pseudo Genes (multiple problems)  :: 16 of 328
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2661638
                     /organism="Lacticaseibacillus chiayiensis"
                     /mol_type="genomic DNA"
                     /strain="BCRC 18859"
                     /isolation_source="coconut juice"
                     /culture_collection="BCRC:18859"
                     /db_xref="taxon:2100821"
                     /geo_loc_name="Philippines"
                     /collection_date="2010"
                     /collected_by="Okada"
WGS         NOXN01000001-NOXN01000135
WGS_SCAFLD  NZ_NOXN01000001-NZ_NOXN01000135
//
LOCUS       NZ_JBBEVY010000000   2779588 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Lacticaseibacillus casei strain MCC 0223, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBBEVY000000000
VERSION     NZ_JBBEVY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40371656
            Assembly: GCF_037407155.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus casei
  ORGANISM  Lacticaseibacillus casei
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 2779588)
  AUTHORS   Dhakephalkar,T., Pore,S.D., Kapse,N.G., Shetty,D., Pisu,V.S.,
            Wagh,S., Dagar,S. and Dhakephalkar,P.K.
  TITLE     Genomic insights into probiotic potential of Lacticaseibacillus
            casei MCC 0223
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2779588)
  AUTHORS   Dhakephalkar,T., Pore,S.D., Kapse,N.G., Shetty,D., Pisu,V.S.,
            Wagh,S., Dagar,S. and Dhakephalkar,P.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2024) Bioenergy, Agharkar Research Institute, G.G
            Agarkar road, Pune, Maharastra 411004, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBEVY000000000.1.
            The Lacticaseibacillus casei whole genome shotgun (WGS) project has
            the project accession NZ_JBBEVY000000000.  This version of the
            project (01) has the accession number NZ_JBBEVY010000000, and
            consists of sequences JBBEVY010000001-JBBEVY010000162.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.5.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037407155.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:44:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,754
            CDSs (total)                      :: 2,697
            Genes (coding)                    :: 2,535
            CDSs (with protein)               :: 2,535
            Genes (RNA)                       :: 57
            rRNAs                             :: 2, 3 (16S, 23S)
            partial rRNAs                     :: 2, 3 (16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 162
            CDSs (without protein)            :: 162
            Pseudo Genes (ambiguous residues) :: 0 of 162
            Pseudo Genes (frameshifted)       :: 64 of 162
            Pseudo Genes (incomplete)         :: 64 of 162
            Pseudo Genes (internal stop)      :: 40 of 162
            Pseudo Genes (multiple problems)  :: 6 of 162
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2779588
                     /organism="Lacticaseibacillus casei"
                     /mol_type="genomic DNA"
                     /strain="MCC 0223"
                     /isolation_source="dairy Product"
                     /db_xref="taxon:1582"
                     /geo_loc_name="India: Maharashtra"
                     /collection_date="2013-05"
WGS         JBBEVY010000001-JBBEVY010000162
WGS_SCAFLD  NZ_JBBEVY010000001-NZ_JBBEVY010000162
//
LOCUS       NZ_SMKX01000000      9279240 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Kribbella antibiotica strain JCM 13523, whole genome shotgun
            sequencing project.
ACCESSION   NZ_SMKX00000000
VERSION     NZ_SMKX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11032561
            Assembly: GCF_004349055.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kribbella antibiotica
  ORGANISM  Kribbella antibiotica
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Kribbellaceae; Kribbella.
REFERENCE   1  (bases 1 to 9279240)
  AUTHORS   Sahin,N., Ay,H. and Saygin,H.
  TITLE     Draft genome sequences of novel Actinobacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 9279240)
  AUTHORS   Sahin,N., Ay,H. and Saygin,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-MAR-2019) Molecular Biology and Genetics, Ondokuz
            Mayis University, Kurupelit, Samsun 55139, Turkey
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SMKX00000000.1.
            The Kribbella antibiotica whole genome shotgun (WGS) project has
            the project accession NZ_SMKX00000000.  This version of the project
            (01) has the accession number NZ_SMKX01000000, and consists of
            sequences SMKX01000001-SMKX01000348.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. FEB-2019
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 119x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004349055.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:29:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 8,593
            CDSs (total)                      :: 8,522
            Genes (coding)                    :: 8,467
            CDSs (with protein)               :: 8,467
            Genes (RNA)                       :: 71
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 62
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 55
            CDSs (without protein)            :: 55
            Pseudo Genes (ambiguous residues) :: 0 of 55
            Pseudo Genes (frameshifted)       :: 6 of 55
            Pseudo Genes (incomplete)         :: 52 of 55
            Pseudo Genes (internal stop)      :: 1 of 55
            Pseudo Genes (multiple problems)  :: 4 of 55
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9279240
                     /organism="Kribbella antibiotica"
                     /mol_type="genomic DNA"
                     /strain="JCM 13523"
                     /isolation_source="soil"
                     /type_material="type strain of Kribbella antibiotica"
                     /db_xref="taxon:190195"
                     /geo_loc_name="China: Yunnan Province"
                     /collection_date="2004-10"
WGS         SMKX01000001-SMKX01000348
WGS_SCAFLD  NZ_SMKX01000001-NZ_SMKX01000348
//
LOCUS       NZ_SJKB01000000      9491812 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Kribbella pittospori strain NRRL B-24813, whole genome shotgun
            sequencing project.
ACCESSION   NZ_SJKB00000000
VERSION     NZ_SJKB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10963502
            Assembly: GCF_004331465.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kribbella pittospori
  ORGANISM  Kribbella pittospori
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Kribbellaceae; Kribbella.
REFERENCE   1  (bases 1 to 9491812)
  AUTHORS   Curtis,S.M., Norton,I., Everest,G.J. and Meyers,P.R.
  TITLE     Kribbella capetownensis sp. nov. and Kribbella speibonae sp. nov.,
            isolated from soil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 9491812)
  AUTHORS   Meyers,P.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-FEB-2019) Molecular & Cell Biology, University of
            Cape Town, University Avenue, Cape Town 7700, South Africa
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SJKB00000000.1.
            The Kribbella pittospori whole genome shotgun (WGS) project has the
            project accession NZ_SJKB00000000.  This version of the project
            (01) has the accession number NZ_SJKB01000000, and consists of
            sequences SJKB01000001-SJKB01000070.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2018
            Assembly Method        :: SPAdes v. 3.6.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 44.83 x
            Sequencing Technology  :: Illumina HiSeq 4000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004331465.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:29:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 9,262
            CDSs (total)                      :: 9,194
            Genes (coding)                    :: 9,110
            CDSs (with protein)               :: 9,110
            Genes (RNA)                       :: 68
            rRNAs                             :: 3, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 2 (5S, 16S)
            tRNAs                             :: 58
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 84
            CDSs (without protein)            :: 84
            Pseudo Genes (ambiguous residues) :: 0 of 84
            Pseudo Genes (frameshifted)       :: 26 of 84
            Pseudo Genes (incomplete)         :: 65 of 84
            Pseudo Genes (internal stop)      :: 4 of 84
            Pseudo Genes (multiple problems)  :: 11 of 84
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9491812
                     /organism="Kribbella pittospori"
                     /mol_type="genomic DNA"
                     /strain="NRRL B-24813"
                     /isolation_source="stem of Australian native apricot tree"
                     /host="Pittosporum angustifolium"
                     /culture_collection="NRRL:B-24813"
                     /type_material="type strain of Kribbella pittospori"
                     /db_xref="taxon:722689"
                     /geo_loc_name="Australia: Adelaide, grounds of Flinders
                     University"
                     /lat_lon="35.0192 S 138.5703 E"
WGS         SJKB01000001-SJKB01000070
WGS_SCAFLD  NZ_SJKB01000001-NZ_SJKB01000070
//
LOCUS       NZ_JAECVO010000000   5863755 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain ONE286, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAECVO000000000
VERSION     NZ_JAECVO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17024588
            Assembly: GCF_056172535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5863755)
  AUTHORS   Garcia,D., Fernandes,M., Moura,Q., Esposito,F. and Lincopan,N.
  TITLE     Draft genome of OXA-2-producing Klebsiella pneumoniae recovered
            from a human bloodstream infection sample in Brazil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5863755)
  AUTHORS   Garcia,D., Fernandes,M., Moura,Q., Esposito,F. and Lincopan,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-DEC-2020) Microbiology, University of Sao Paulo,
            Lineu Prestes Avenue, Sao Paulo, Sao Paulo 05508-900, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAECVO000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JAECVO000000000.  This version of the
            project (01) has the accession number NZ_JAECVO010000000, and
            consists of sequences JAECVO010000001-JAECVO010000299.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Uniciclyer v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 176.0x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172535.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:11:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,008
            CDSs (total)                      :: 5,932
            Genes (coding)                    :: 5,745
            CDSs (with protein)               :: 5,745
            Genes (RNA)                       :: 76
            rRNAs                             :: 1, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 187
            CDSs (without protein)            :: 187
            Pseudo Genes (ambiguous residues) :: 0 of 187
            Pseudo Genes (frameshifted)       :: 52 of 187
            Pseudo Genes (incomplete)         :: 136 of 187
            Pseudo Genes (internal stop)      :: 14 of 187
            Pseudo Genes (multiple problems)  :: 13 of 187
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5863755
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="ONE286"
                     /isolation_source="Rectal swab sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Brazil: Sao Paulo"
                     /lat_lon="23.5489 S 46.6388 W"
                     /collection_date="2011"
                     /collected_by="Doroti Garcia"
WGS         JAECVO010000001-JAECVO010000299
WGS_SCAFLD  NZ_JAECVO010000001-NZ_JAECVO010000299
//
LOCUS       NZ_SJJY01000000      8874969 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Kribbella speibonae strain SK5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_SJJY00000000
VERSION     NZ_SJJY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10979285
            Assembly: GCF_004331335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kribbella speibonae
  ORGANISM  Kribbella speibonae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Kribbellaceae; Kribbella.
REFERENCE   1  (bases 1 to 8874969)
  AUTHORS   Curtis,S.M., Norton,I., Everest,G.J. and Meyers,P.R.
  TITLE     Kribbella capetownensis sp. nov. and Kribbella speibonae sp. nov.,
            isolated from soil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8874969)
  AUTHORS   Meyers,P.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-FEB-2019) Molecular & Cell Biology, University of
            Cape Town, University Avenue, Cape Town 7700, South Africa
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SJJY00000000.1.
            The Kribbella speibonae whole genome shotgun (WGS) project has the
            project accession NZ_SJJY00000000.  This version of the project
            (01) has the accession number NZ_SJJY01000000, and consists of
            sequences SJJY01000001-SJJY01000021.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: SEP-2018
            Assembly Method        :: SPAdes v. 3.10.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 314.07 x
            Sequencing Technology  :: Illumina MiSeq 300 PE
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004331335.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:23:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 8,560
            CDSs (total)                      :: 8,497
            Genes (coding)                    :: 8,471
            CDSs (with protein)               :: 8,471
            Genes (RNA)                       :: 63
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 3 of 26
            Pseudo Genes (incomplete)         :: 24 of 26
            Pseudo Genes (internal stop)      :: 0 of 26
            Pseudo Genes (multiple problems)  :: 1 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8874969
                     /organism="Kribbella speibonae"
                     /mol_type="genomic DNA"
                     /strain="SK5"
                     /isolation_source="Soil"
                     /db_xref="taxon:1572660"
                     /geo_loc_name="South Africa: Stellenbosch"
                     /lat_lon="33.93 S 18.87 E"
                     /collection_date="2015"
WGS         SJJY01000001-SJJY01000021
WGS_SCAFLD  NZ_SJJY01000001-NZ_SJJY01000021
//
LOCUS       NZ_CBDBYF010000000   2934113 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Lacticaseibacillus paracasei isolate Lactobacillus paracasei VK-B,
            whole genome shotgun sequencing project.
ACCESSION   NZ_CBDBYF000000000
VERSION     NZ_CBDBYF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117819815
            Assembly: GCF_965213315.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lacticaseibacillus paracasei
  ORGANISM  Lacticaseibacillus paracasei
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lacticaseibacillus.
REFERENCE   1  (bases 1 to 2934113)
  AUTHORS   Kisand,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAR-2025) University of Tartu, Institute of
            Technology, Environmental Microbiology, Nooruse 1, 50411, Estonia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBDBYF000000000.1.
            The Lacticaseibacillus paracasei whole genome shotgun (WGS) project
            has the project accession NZ_CBDBYF000000000.  This version of the
            project (01) has the accession number NZ_CBDBYF010000000, and
            consists of sequences CBDBYF010000001-CBDBYF010000015.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_965213315.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:35:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,920
            CDSs (total)                      :: 2,841
            Genes (coding)                    :: 2,683
            CDSs (with protein)               :: 2,683
            Genes (RNA)                       :: 79
            rRNAs                             :: 5, 7, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 4, 5 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (16S)
            tRNAs                             :: 59
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 158
            CDSs (without protein)            :: 158
            Pseudo Genes (ambiguous residues) :: 0 of 158
            Pseudo Genes (frameshifted)       :: 46 of 158
            Pseudo Genes (incomplete)         :: 107 of 158
            Pseudo Genes (internal stop)      :: 21 of 158
            Pseudo Genes (multiple problems)  :: 15 of 158
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2934113
                     /organism="Lacticaseibacillus paracasei"
                     /mol_type="genomic DNA"
                     /isolate="Lactobacillus paracasei VK-B"
                     /db_xref="taxon:1597"
                     /geo_loc_name="Estonia"
                     /collection_date="2018"
WGS         CBDBYF010000001-CBDBYF010000015
WGS_SCAFLD  NZ_CBDBYF010000001-NZ_CBDBYF010000015
//
LOCUS       NZ_JAECVP010000000   5562868 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain ONE301, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAECVP000000000
VERSION     NZ_JAECVP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17024633
            Assembly: GCF_056172555.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5562868)
  AUTHORS   Vianello,M.A., Fernandes,M., Moura,Q., Fuga,B., Esposito,F. and
            Lincopan,N.
  TITLE     Draft genome of ESBL-producing Klebsiella pneumoniae recovered from
            a human rectal swab sample in Brazil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5562868)
  AUTHORS   Vianello,M.A., Fernandes,M., Moura,Q., Fuga,B., Esposito,F. and
            Lincopan,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-DEC-2020) Microbiology, University of Sao Paulo,
            Lineu Prestes Avenue, Sao Paulo, Sao Paulo 05508-900, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAECVP000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JAECVP000000000.  This version of the
            project (01) has the accession number NZ_JAECVP010000000, and
            consists of sequences JAECVP010000001-JAECVP010000109.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Uniciclyer v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 386.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172555.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:07:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,493
            CDSs (total)                      :: 5,395
            Genes (coding)                    :: 5,248
            CDSs (with protein)               :: 5,248
            Genes (RNA)                       :: 98
            rRNAs                             :: 3, 1, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 4 (23S)
            tRNAs                             :: 77
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 147
            CDSs (without protein)            :: 147
            Pseudo Genes (ambiguous residues) :: 0 of 147
            Pseudo Genes (frameshifted)       :: 55 of 147
            Pseudo Genes (incomplete)         :: 91 of 147
            Pseudo Genes (internal stop)      :: 19 of 147
            Pseudo Genes (multiple problems)  :: 16 of 147
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5562868
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="ONE301"
                     /isolation_source="Rectal swab sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Brazil: Amazonas"
                     /lat_lon="3.10719 S 60.0261 W"
                     /collection_date="2011"
                     /collected_by="Marco Vianello"
WGS         JAECVP010000001-JAECVP010000109
WGS_SCAFLD  NZ_JAECVP010000001-NZ_JAECVP010000109
//
LOCUS       NZ_JAEDYJ010000000   5332401 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain ONE282, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAEDYJ000000000
VERSION     NZ_JAEDYJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17036236
            Assembly: GCF_056172595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5332401)
  AUTHORS   Knobl,T., Fernandes,M., Moura,Q., Cunha,M., Esposito,F. and
            Lincopan,N.
  TITLE     Draft genome of ESBL-producing Klebsiella pneumoniae recovered from
            an animal rectal swab sample in Brazil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5332401)
  AUTHORS   Knobl,T., Fernandes,M., Moura,Q., Cunha,M., Esposito,F. and
            Lincopan,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-DEC-2020) Microbiology, University of Sao Paulo,
            Lineu Prestes Avenue, Sao Paulo, Sao Paulo 05508-900, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAEDYJ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JAEDYJ000000000.  This version of the
            project (01) has the accession number NZ_JAEDYJ010000000, and
            consists of sequences JAEDYJ010000001-JAEDYJ010000102.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 209.0x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172595.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:03:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,309
            CDSs (total)                      :: 5,224
            Genes (coding)                    :: 5,122
            CDSs (with protein)               :: 5,122
            Genes (RNA)                       :: 85
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 1 (16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 102
            CDSs (without protein)            :: 102
            Pseudo Genes (ambiguous residues) :: 0 of 102
            Pseudo Genes (frameshifted)       :: 45 of 102
            Pseudo Genes (incomplete)         :: 58 of 102
            Pseudo Genes (internal stop)      :: 13 of 102
            Pseudo Genes (multiple problems)  :: 13 of 102
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5332401
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="ONE282"
                     /isolation_source="Cloacal swab sample"
                     /host="Gallus gallus"
                     /db_xref="taxon:573"
                     /geo_loc_name="Brazil: Parana"
                     /lat_lon="25.4284 S 49.2733 W"
                     /collection_date="2017"
                     /collected_by="Terezinha Knobl"
WGS         JAEDYJ010000001-JAEDYJ010000102
WGS_SCAFLD  NZ_JAEDYJ010000001-NZ_JAEDYJ010000102
//
LOCUS       NZ_JAECVL010000000   5783873 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain ONE298, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAECVL000000000
VERSION     NZ_JAECVL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17023882
            Assembly: GCF_056172475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5783873)
  AUTHORS   Esposito,F., Cardoso,B., Oliveira,F., Cerdeira,L., Levy,C.E. and
            Lincopan,N.
  TITLE     Draft genome of KPC-2-producing Klebsiella pneumoniae recovered
            from a human bloodstream infection sample in Brazil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5783873)
  AUTHORS   Esposito,F., Cardoso,B., Oliveira,F., Cerdeira,L., Levy,C.E. and
            Lincopan,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-DEC-2020) Microbiology, University of Sao Paulo,
            Lineu Prestes Avenue, Sao Paulo, Sao Paulo 05508-900, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAECVL000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JAECVL000000000.  This version of the
            project (01) has the accession number NZ_JAECVL010000000, and
            consists of sequences JAECVL010000001-JAECVL010000191.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Uniciclyer v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 231.0x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172475.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:08:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,839
            CDSs (total)                      :: 5,787
            Genes (coding)                    :: 5,626
            CDSs (with protein)               :: 5,626
            Genes (RNA)                       :: 52
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 161
            CDSs (without protein)            :: 161
            Pseudo Genes (ambiguous residues) :: 0 of 161
            Pseudo Genes (frameshifted)       :: 71 of 161
            Pseudo Genes (incomplete)         :: 88 of 161
            Pseudo Genes (internal stop)      :: 16 of 161
            Pseudo Genes (multiple problems)  :: 13 of 161
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5783873
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="ONE298"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Brazil: Sao Paulo"
                     /lat_lon="22.826907 S 47.064108 W"
                     /collection_date="2013"
                     /collected_by="Flavio A. Oliveira"
WGS         JAECVL010000001-JAECVL010000191
WGS_SCAFLD  NZ_JAECVL010000001-NZ_JAECVL010000191
//
LOCUS       NZ_JAECVQ010000000   5349018 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain ONE268, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAECVQ000000000
VERSION     NZ_JAECVQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17024634
            Assembly: GCF_056172575.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5349018)
  AUTHORS   Fernandes,M., Sellera,F., Moura,Q., Esposito,F. and Lincopan,N.
  TITLE     Draft genome of ESBL-producing Klebsiella pneumoniae recovered from
            an animal rectal swab sample in Brazil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5349018)
  AUTHORS   Fernandes,M., Sellera,F., Moura,Q., Esposito,F. and Lincopan,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-DEC-2020) Microbiology, University of Sao Paulo,
            Lineu Prestes Avenue, Sao Paulo, Sao Paulo 05508-900, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAECVQ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JAECVQ000000000.  This version of the
            project (01) has the accession number NZ_JAECVQ010000000, and
            consists of sequences JAECVQ010000001-JAECVQ010000092.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Uniciclyer v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 218.0x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172575.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:04:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,219
            CDSs (total)                      :: 5,171
            Genes (coding)                    :: 5,053
            CDSs (with protein)               :: 5,053
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 36
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 58 of 118
            Pseudo Genes (incomplete)         :: 61 of 118
            Pseudo Genes (internal stop)      :: 14 of 118
            Pseudo Genes (multiple problems)  :: 14 of 118
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5349018
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="ONE268"
                     /isolation_source="Rectal swab sample"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:573"
                     /geo_loc_name="Brazil: Sao Paulo"
                     /lat_lon="23.9991 S 46.4133 W"
                     /collection_date="2017"
                     /collected_by="Miriam Fernandes, Fabio Sellera"
WGS         JAECVQ010000001-JAECVQ010000092
WGS_SCAFLD  NZ_JAECVQ010000001-NZ_JAECVQ010000092
//
LOCUS       NZ_JAECVK010000000   5845409 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain ONE297, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAECVK000000000
VERSION     NZ_JAECVK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17023637
            Assembly: GCF_056172455.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5845409)
  AUTHORS   Esposito,F., Cardoso,B., Oliveira,F., Cerdeira,L., Levy,C.E. and
            Lincopan,N.
  TITLE     Draft genome of KPC-2-producing Klebsiella pneumoniae recovered
            from a human bloodstream infection sample in Brazil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5845409)
  AUTHORS   Esposito,F., Cardoso,B., Oliveira,F., Cerdeira,L., Levy,C.E. and
            Lincopan,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-DEC-2020) Microbiology, University of Sao Paulo,
            Lineu Prestes Avenue, Sao Paulo, Sao Paulo 05508-900, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAECVK000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JAECVK000000000.  This version of the
            project (01) has the accession number NZ_JAECVK010000000, and
            consists of sequences JAECVK010000001-JAECVK010000165.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Uniciclyer v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 218.0x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172455.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:06:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,876
            CDSs (total)                      :: 5,821
            Genes (coding)                    :: 5,666
            CDSs (with protein)               :: 5,666
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 155
            CDSs (without protein)            :: 155
            Pseudo Genes (ambiguous residues) :: 0 of 155
            Pseudo Genes (frameshifted)       :: 56 of 155
            Pseudo Genes (incomplete)         :: 98 of 155
            Pseudo Genes (internal stop)      :: 18 of 155
            Pseudo Genes (multiple problems)  :: 15 of 155
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5845409
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="ONE297"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Brazil: Sao Paulo"
                     /lat_lon="22.826907 S 47.064108 W"
                     /collection_date="2012"
                     /collected_by="Flavio A. Oliveira"
WGS         JAECVK010000001-JAECVK010000165
WGS_SCAFLD  NZ_JAECVK010000001-NZ_JAECVK010000165
//
LOCUS       NZ_JBSAXH010000000   4923565 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pantoea agglomerans strain C9II, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSAXH000000000
VERSION     NZ_JBSAXH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50273547
            Assembly: GCF_056156785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea agglomerans
  ORGANISM  Pantoea agglomerans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea; Pantoea agglomerans group.
REFERENCE   1  (bases 1 to 4923565)
  AUTHORS   Knecht,C.A., Prack Mccormick,B., Alvarez,V.E., Buzzola,F.,
            Fuchs,J., Salgado,P., Campos,J., Quiroga,M.P. and Centron,D.
  TITLE     The use of glyphosate in agriculture contributes to the rise of
            species causing multidrug hospital-acquired infections
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4923565)
  AUTHORS   Knecht,C.A., Campos,J., Alvarez,V.E., Quiroga,M.P. and Centron,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JUL-2025) Institute of Research in Medical
            Microbiology and Parasitology, Universidad de Buenos Aires,
            CONICET, Paraguay 2155, Buenos Aires 1121, Argentina
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSAXH000000000.1.
            The Pantoea agglomerans whole genome shotgun (WGS) project has the
            project accession NZ_JBSAXH000000000.  This version of the project
            (01) has the accession number NZ_JBSAXH010000000, and consists of
            sequences JBSAXH010000001-JBSAXH010000051.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 460x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056156785.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:35:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,677
            CDSs (total)                      :: 4,597
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 80
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 68
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 8 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 7 of 36
            Pseudo Genes (multiple problems)  :: 8 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4923565
                     /organism="Pantoea agglomerans"
                     /mol_type="genomic DNA"
                     /strain="C9II"
                     /isolation_source="sediment"
                     /db_xref="taxon:549"
                     /geo_loc_name="Argentina: Ramsar site at the Parana Delta"
                     /lat_lon="34.2228988 S 58.8975770 W"
                     /collection_date="2018-11"
WGS         JBSAXH010000001-JBSAXH010000051
WGS_SCAFLD  NZ_JBSAXH010000001-NZ_JBSAXH010000051
//
LOCUS       NZ_JBSWUJ010000000   2512610 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Micrococcus luteus strain ABF4_147, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWUJ000000000
VERSION     NZ_JBSWUJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862011
            Assembly: GCF_056159005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Micrococcus luteus
  ORGANISM  Micrococcus luteus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Micrococcus.
REFERENCE   1  (bases 1 to 2512610)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWUJ000000000.1.
            The Micrococcus luteus whole genome shotgun (WGS) project has the
            project accession NZ_JBSWUJ000000000.  This version of the project
            (01) has the accession number NZ_JBSWUJ010000000, and consists of
            sequences JBSWUJ010000001-JBSWUJ010000005.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1077x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056159005.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:00:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,326
            CDSs (total)                      :: 2,268
            Genes (coding)                    :: 2,230
            CDSs (with protein)               :: 2,230
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 38
            CDSs (without protein)            :: 38
            Pseudo Genes (ambiguous residues) :: 0 of 38
            Pseudo Genes (frameshifted)       :: 13 of 38
            Pseudo Genes (incomplete)         :: 28 of 38
            Pseudo Genes (internal stop)      :: 4 of 38
            Pseudo Genes (multiple problems)  :: 6 of 38
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2512610
                     /organism="Micrococcus luteus"
                     /mol_type="genomic DNA"
                     /strain="ABF4_147"
                     /isolation_source="Marine"
                     /db_xref="taxon:1270"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWUJ010000001-JBSWUJ010000005
WGS_SCAFLD  NZ_JBSWUJ010000001-NZ_JBSWUJ010000005
//
LOCUS       NZ_JBSWWJ010000000   2721418 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Microcella pacifica strain ABH1_007, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSWWJ000000000
VERSION     NZ_JBSWWJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861951
            Assembly: GCF_056160025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Microcella pacifica
  ORGANISM  Microcella pacifica
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microcella.
REFERENCE   1  (bases 1 to 2721418)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWWJ000000000.1.
            The Microcella pacifica whole genome shotgun (WGS) project has the
            project accession NZ_JBSWWJ000000000.  This version of the project
            (01) has the accession number NZ_JBSWWJ010000000, and consists of
            sequences JBSWWJ010000001-JBSWWJ010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1847x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056160025.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:13:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,634
            CDSs (total)                      :: 2,584
            Genes (coding)                    :: 2,534
            CDSs (with protein)               :: 2,534
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 5 of 50
            Pseudo Genes (incomplete)         :: 41 of 50
            Pseudo Genes (internal stop)      :: 6 of 50
            Pseudo Genes (multiple problems)  :: 2 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2721418
                     /organism="Microcella pacifica"
                     /mol_type="genomic DNA"
                     /strain="ABH1_007"
                     /isolation_source="Marine"
                     /db_xref="taxon:2591847"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWWJ010000001-JBSWWJ010000004
WGS_SCAFLD  NZ_JBSWWJ010000001-NZ_JBSWWJ010000004
//
LOCUS       NZ_JBMIQH010000000   8875333 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Paraburkholderia sp. BR10141, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBMIQH000000000
VERSION     NZ_JBMIQH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47442548
            Assembly: GCF_056155635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paraburkholderia sp. BR10141
  ORGANISM  Paraburkholderia sp. BR10141
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (bases 1 to 8875333)
  AUTHORS   Rouws,L.F.M., Zilli,J.E., Junior,F.B.R. and James,E.K.
  TITLE     Novel species of Paraburkholderia
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8875333)
  AUTHORS   Rouws,L.F.M., Zilli,J.E. and Junior,F.B.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-MAR-2025) Lab. de Ecologia Microbiana, Embrapa
            Agrobiologia, Rodovia BR465, km 7, Seropedica, RJ 23891-000, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBMIQH000000000.1.
            The Paraburkholderia sp. BR10141 whole genome shotgun (WGS) project
            has the project accession NZ_JBMIQH000000000.  This version of the
            project (01) has the accession number NZ_JBMIQH010000000, and
            consists of sequences JBMIQH010000001-JBMIQH010000173.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Colecao de Recursos
            Biologicos - Johanna Doebereiner, Embrapa Agrobiologia, Seropedica,
            Brazil.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-APR-2020
            Assembly Method        :: SPAdes v. 2020-04-13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 240.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155635.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:30:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 8,266
            CDSs (total)                      :: 8,208
            Genes (coding)                    :: 7,905
            CDSs (with protein)               :: 7,905
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 303
            CDSs (without protein)            :: 303
            Pseudo Genes (ambiguous residues) :: 0 of 303
            Pseudo Genes (frameshifted)       :: 123 of 303
            Pseudo Genes (incomplete)         :: 248 of 303
            Pseudo Genes (internal stop)      :: 29 of 303
            Pseudo Genes (multiple problems)  :: 85 of 303
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8875333
                     /organism="Paraburkholderia sp. BR10141"
                     /mol_type="genomic DNA"
                     /strain="BR10141"
                     /isolation_source="root nodules"
                     /host="Mimosa setosissima"
                     /db_xref="taxon:3410265"
                     /geo_loc_name="Brazil: Goias,Cocalzinho de Goias"
                     /lat_lon="15.79230556 S 48.81369444 W"
                     /altitude="1160 m"
                     /collection_date="2005-09-07"
                     /collected_by="Fabio Bueno do Reis Junior"
                     /identified_by="Jerri Zilli"
WGS         JBMIQH010000001-JBMIQH010000173
WGS_SCAFLD  NZ_JBMIQH010000001-NZ_JBMIQH010000173
//
LOCUS       NZ_JBSWVO010000000   5030151 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mycoplana sp. ABR4_002, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWVO000000000
VERSION     NZ_JBSWVO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861974
            Assembly: GCF_056159645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mycoplana sp. ABR4_002
  ORGANISM  Mycoplana sp. ABR4_002
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Mycoplana.
REFERENCE   1  (bases 1 to 5030151)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWVO000000000.1.
            The Mycoplana sp. ABR4_002 whole genome shotgun (WGS) project has
            the project accession NZ_JBSWVO000000000.  This version of the
            project (01) has the accession number NZ_JBSWVO010000000, and
            consists of sequences JBSWVO010000001-JBSWVO010000003.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 636x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056159645.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:29:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,740
            CDSs (total)                      :: 4,674
            Genes (coding)                    :: 4,622
            CDSs (with protein)               :: 4,622
            Genes (RNA)                       :: 66
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 25 of 52
            Pseudo Genes (incomplete)         :: 37 of 52
            Pseudo Genes (internal stop)      :: 8 of 52
            Pseudo Genes (multiple problems)  :: 16 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5030151
                     /organism="Mycoplana sp. ABR4_002"
                     /mol_type="genomic DNA"
                     /strain="ABR4_002"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477734"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWVO010000001-JBSWVO010000003
WGS_SCAFLD  NZ_JBSWVO010000001-NZ_JBSWVO010000003
//
LOCUS       NZ_JBSWXJ010000000   2454862 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Micrococcus luteus strain ABH4_547, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWXJ000000000
VERSION     NZ_JBSWXJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861923
            Assembly: GCF_056160545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Micrococcus luteus
  ORGANISM  Micrococcus luteus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Micrococcus.
REFERENCE   1  (bases 1 to 2454862)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWXJ000000000.1.
            The Micrococcus luteus whole genome shotgun (WGS) project has the
            project accession NZ_JBSWXJ000000000.  This version of the project
            (01) has the accession number NZ_JBSWXJ010000000, and consists of
            sequences JBSWXJ010000001-JBSWXJ010000153.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 465x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056160545.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:37:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,338
            CDSs (total)                      :: 2,275
            Genes (coding)                    :: 2,210
            CDSs (with protein)               :: 2,210
            Genes (RNA)                       :: 63
            rRNAs                             :: 2, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 13 of 65
            Pseudo Genes (incomplete)         :: 56 of 65
            Pseudo Genes (internal stop)      :: 3 of 65
            Pseudo Genes (multiple problems)  :: 6 of 65
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2454862
                     /organism="Micrococcus luteus"
                     /mol_type="genomic DNA"
                     /strain="ABH4_547"
                     /isolation_source="Marine"
                     /db_xref="taxon:1270"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2024-02-27"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWXJ010000001-JBSWXJ010000153
WGS_SCAFLD  NZ_JBSWXJ010000001-NZ_JBSWXJ010000153
//
LOCUS       NZ_AUZF01000000      5345703 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pandoraea pnomenusa strain RB-44, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AUZF00000000
VERSION     NZ_AUZF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02641598
            Assembly: GCF_000523065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pandoraea pnomenusa
  ORGANISM  Pandoraea pnomenusa
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Pandoraea.
REFERENCE   1  (bases 1 to 5345703)
  AUTHORS   Ee,R. and Chan,K.G.
  TITLE     Draft genome of Pandoraea sp. rb-44
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5345703)
  AUTHORS   Ee,R. and Chan,K.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-AUG-2013) University of Malaya, Jalan Universiti,
            Kuala Lumpur 50603, Malaysia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AUZF00000000.1.
            The Pandoraea pnomenusa whole genome shotgun (WGS) project has the
            project accession NZ_AUZF00000000.  This version of the project
            (01) has the accession number NZ_AUZF01000000, and consists of
            sequences AUZF01000001-AUZF01000113.
            Bacteria available from SOIL. Source DNA available from GENOMIC.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: CLC Genomics Workbench v. 6.0.5
            Genome Coverage       :: 74.0x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000523065.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:37:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,872
            CDSs (total)                      :: 4,805
            Genes (coding)                    :: 4,733
            CDSs (with protein)               :: 4,733
            Genes (RNA)                       :: 67
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 72
            CDSs (without protein)            :: 72
            Pseudo Genes (ambiguous residues) :: 0 of 72
            Pseudo Genes (frameshifted)       :: 10 of 72
            Pseudo Genes (incomplete)         :: 64 of 72
            Pseudo Genes (internal stop)      :: 3 of 72
            Pseudo Genes (multiple problems)  :: 5 of 72
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5345703
                     /organism="Pandoraea pnomenusa"
                     /mol_type="genomic DNA"
                     /strain="RB-44"
                     /isolation_source="soil"
                     /db_xref="taxon:93220"
                     /geo_loc_name="Malaysia"
WGS         AUZF01000001-AUZF01000113
WGS_SCAFLD  NZ_AUZF01000001-NZ_AUZF01000113
//
LOCUS       NZ_JSAM01000000      3008885 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Parachlamydia acanthamoebae strain OEW1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JSAM00000000
VERSION     NZ_JSAM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03083484
            Assembly: GCF_000812225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Parachlamydia acanthamoebae
  ORGANISM  Parachlamydia acanthamoebae
            Bacteria; Pseudomonadati; Chlamydiota; Chlamydiia;
            Parachlamydiales; Parachlamydiaceae; Parachlamydia.
REFERENCE   1  (bases 1 to 3008885)
  AUTHORS   Domman,D., Collingro,A., Lagkouvardos,I., Gehre,L., Weinmaier,T.,
            Rattei,T., Subtil,A. and Horn,M.
  TITLE     Massive expansion of Ubiquitination-related gene families within
            the Chlamydiae
  JOURNAL   Mol Biol Evol 31 (11), 2890-2904 (2014)
   PUBMED   25069652
REFERENCE   2  (bases 1 to 3008885)
  AUTHORS   Domman,D.B., Collingro,A., Lagkouvardos,I., Gehre,L., Weinmaier,T.,
            Rattei,T., Subtil,A. and Horn,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-OCT-2014) Division of Microbial Ecology, University
            of Vienna, Althanstr. 14, Vienna 1090, Austria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JSAM00000000.1.
            The Parachlamydia acanthamoebae whole genome shotgun (WGS) project
            has the project accession NZ_JSAM00000000.  This version of the
            project (01) has the accession number NZ_JSAM01000000, and consists
            of sequences JSAM01000001-JSAM01000162.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Newbler v. 2.6
            Assembly Name         :: OEW1_v1
            Genome Coverage       :: 17.0x
            Sequencing Technology :: 454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000812225.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:06:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,764
            CDSs (total)                      :: 2,719
            Genes (coding)                    :: 2,583
            CDSs (with protein)               :: 2,583
            Genes (RNA)                       :: 45
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 136
            CDSs (without protein)            :: 136
            Pseudo Genes (ambiguous residues) :: 0 of 136
            Pseudo Genes (frameshifted)       :: 55 of 136
            Pseudo Genes (incomplete)         :: 99 of 136
            Pseudo Genes (internal stop)      :: 12 of 136
            Pseudo Genes (multiple problems)  :: 25 of 136
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3008885
                     /organism="Parachlamydia acanthamoebae"
                     /mol_type="genomic DNA"
                     /strain="OEW1"
                     /isolation_source="lake sediment"
                     /db_xref="taxon:83552"
                     /geo_loc_name="Austria:Burgenland, Woerthenlacke"
                     /collection_date="2005"
WGS         JSAM01000001-JSAM01000162
WGS_SCAFLD  NZ_JSAM01000001-NZ_JSAM01000162
//
LOCUS       NZ_AXAO01000000      8638292 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Paraburkholderia mimosarum STM 3621, whole genome shotgun
            sequencing project.
ACCESSION   NZ_AXAO00000000
VERSION     NZ_AXAO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02440788
            Assembly: GCF_000472845.1
KEYWORDS    WGS; IMPROVED_HIGH_QUALITY_DRAFT; RefSeq.
SOURCE      Paraburkholderia mimosarum STM 3621
  ORGANISM  Paraburkholderia mimosarum STM 3621
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (bases 1 to 8638292)
  AUTHORS   Kyrpides,N., Huntemann,M., Han,J., Chen,A., Mavromatis,K.,
            Markowitz,V., Palaniappan,K., Ivanova,N., Schaumberg,A., Pati,A.,
            Liolios,K., Nordberg,H.P., Cantor,M.N., Hua,S.X. and Woyke,T.
  CONSRTM   DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (23-AUG-2013) DOE Joint Genome Institute, 2800 Mitchell
            Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AXAO00000000.1.
            The Paraburkholderia mimosarum STM 3621 whole genome shotgun (WGS)
            project has the project accession NZ_AXAO00000000.  This version of
            the project (01) has the accession number NZ_AXAO01000000, and
            consists of sequences AXAO01000001-AXAO01000270.
            URL -- http://www.jgi.doe.gov
            JGI Project ID: 404557
            Source DNA and Organism available from Wayne Reeve
            (W.Reeve@murdoch.edu.au)
            Contacts: Nikos Kyrpides (NCKyrpides@lbl.gov)
                      Tanja Woyke (microbe@cuba.jgi-psf.org)
            Whole genome sequencing and draft assembly at JGI-PGF
            Annotation by JGI-ORNL
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376)
            Full annotations are available from IMG.
            
            ##MIGS-Data-START##
            assembly               :: ALLPATHS v. R37654
            country                :: French Guiana
            environment            :: Plant root; Root nodule; Host; Soil
            investigation_type     :: bacteria_archaea
            lat_lon                :: 4.946111 -52.300833
            project_name           :: Burkholderia mimosarum STM3621
            sequencing_meth        :: WGS
            biotic_relationship    :: Symbiotic
            rel_to_oxygen          :: Aerobe
            finishing_strategy     :: Level 1: Standard Draft
            GOLD Stamp ID          :: Gi08839
            Type Strain            :: No
            Funding Program        :: DOE-DD 2010
            Isolation Site         :: Lotissement Massel, Cayenne
            Host Name              :: Mimosa pudica
            Cell Shape             :: Rod-shaped
            Motility               :: Motile
            Sporulation            :: Nonsporulating
            Temperature Range      :: Mesophile
            Temperature Optimum    :: 28
            pH                     :: 5-8
            Gram Staining          :: Gram-
            Symbiotic Relationship :: Mutualistic
            Diseases               :: None
            Phenotypes             :: Non-Pathogen
            ##MIGS-Data-END##
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: Improved High-Quality Draft
            Current Finishing Status :: Improved High-Quality Draft
            Assembly Method          :: ALLPATHS v. R37654
            Genome Coverage          :: Unknown
            Sequencing Technology    :: Illumina; 454-GS-FLX-Titanium
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000472845.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:51:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 8,098
            CDSs (total)                      :: 8,029
            Genes (coding)                    :: 7,561
            CDSs (with protein)               :: 7,561
            Genes (RNA)                       :: 69
            rRNAs                             :: 5, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 5 (5S)
            partial rRNAs                     :: 2, 1 (16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 468
            CDSs (without protein)            :: 468
            Pseudo Genes (ambiguous residues) :: 0 of 468
            Pseudo Genes (frameshifted)       :: 152 of 468
            Pseudo Genes (incomplete)         :: 397 of 468
            Pseudo Genes (internal stop)      :: 36 of 468
            Pseudo Genes (multiple problems)  :: 106 of 468
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8638292
                     /organism="Paraburkholderia mimosarum STM 3621"
                     /mol_type="genomic DNA"
                     /strain="STM 3621"
                     /host="Mimosa pudica"
                     /db_xref="taxon:1038870"
                     /geo_loc_name="French Guiana"
                     /lat_lon="4.946111 N 52.300833 W"
WGS         AXAO01000001-AXAO01000270
WGS_SCAFLD  NZ_AXAO01000001-NZ_AXAO01000053
WGS_SCAFLD  NZ_AXAO01000056-NZ_AXAO01000109
WGS_SCAFLD  NZ_AXAO01000112-NZ_AXAO01000270
WGS_SCAFLD  NZ_KI421470-NZ_KI421471
//
LOCUS       NZ_JBSWXU010000000   5730049 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mycobacterium sp. ABE4_509, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWXU000000000
VERSION     NZ_JBSWXU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861911
            Assembly: GCF_056160785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mycobacterium sp. ABE4_509
  ORGANISM  Mycobacterium sp. ABE4_509
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (bases 1 to 5730049)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWXU000000000.1.
            The Mycobacterium sp. ABE4_509 whole genome shotgun (WGS) project
            has the project accession NZ_JBSWXU000000000.  This version of the
            project (01) has the accession number NZ_JBSWXU010000000, and
            consists of sequences JBSWXU010000001-JBSWXU010000372.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 340x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056160785.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:03:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,708
            CDSs (total)                      :: 5,649
            Genes (coding)                    :: 5,421
            CDSs (with protein)               :: 5,421
            Genes (RNA)                       :: 59
            rRNAs                             :: 2, 5, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 5, 4 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 228
            CDSs (without protein)            :: 228
            Pseudo Genes (ambiguous residues) :: 0 of 228
            Pseudo Genes (frameshifted)       :: 22 of 228
            Pseudo Genes (incomplete)         :: 212 of 228
            Pseudo Genes (internal stop)      :: 7 of 228
            Pseudo Genes (multiple problems)  :: 13 of 228
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5730049
                     /organism="Mycobacterium sp. ABE4_509"
                     /mol_type="genomic DNA"
                     /strain="ABE4_509"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477764"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWXU010000001-JBSWXU010000372
WGS_SCAFLD  NZ_JBSWXU010000001-NZ_JBSWXU010000372
//
LOCUS       NZ_JBVFJX010000000   5867151 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mycobacterium avium subsp. hominissuis strain P4-cav, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JBVFJX000000000
VERSION     NZ_JBVFJX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN55367615
            Assembly: GCF_056162605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mycobacterium avium subsp. hominissuis
  ORGANISM  Mycobacterium avium subsp. hominissuis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium
            avium complex (MAC).
REFERENCE   1  (bases 1 to 5867151)
  AUTHORS   Bermudez,L., Nuss,S. and Leestemaker-Palmer,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-FEB-2026) Veterinary Biomedical Sciences, Oregon
            State University, 700 SW 30th St, 105 Magruder Hall, Corvallis, OR
            97311, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBVFJX000000000.1.
            The Mycobacterium avium subsp. hominissuis whole genome shotgun
            (WGS) project has the project accession NZ_JBVFJX000000000.  This
            version of the project (01) has the accession number
            NZ_JBVFJX010000000, and consists of sequence JBVFJX010000001.
            Bacteria and source DNA available from Luiz Bermudez, Oregon State
            University CCVM-VBS, 700 SW 30th St., Corvallis, OR 97331.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 02-AUG-2025
            Assembly Method        :: Flye v. 2.9.5-b1801
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 177.0x
            Sequencing Technology  :: Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056162605.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:42:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,546
            CDSs (total)                      :: 5,489
            Genes (coding)                    :: 5,172
            CDSs (with protein)               :: 5,172
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 317
            CDSs (without protein)            :: 317
            Pseudo Genes (ambiguous residues) :: 0 of 317
            Pseudo Genes (frameshifted)       :: 96 of 317
            Pseudo Genes (incomplete)         :: 253 of 317
            Pseudo Genes (internal stop)      :: 14 of 317
            Pseudo Genes (multiple problems)  :: 42 of 317
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5867151
                     /organism="Mycobacterium avium subsp. hominissuis"
                     /mol_type="genomic DNA"
                     /strain="P4-cav"
                     /isolation_source="Lung tissue swab from biopsy"
                     /host="Homo sapiens"
                     /sub_species="hominissuis"
                     /db_xref="taxon:439334"
                     /geo_loc_name="USA: Oregon"
                     /lat_lon="44.5631 N 123.2851 W"
                     /collection_date="2025-07"
                     /collected_by="Luiz Bermudez"
WGS         JBVFJX010000001
WGS_SCAFLD  NZ_CM149605
//
LOCUS       NZ_CAIE01000000      7321224 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Micromonospora lupini str. Lupac 08, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CAIE00000000
VERSION     NZ_CAIE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA3138422
            Assembly: GCF_000297395.2
KEYWORDS    WGS; RefSeq.
SOURCE      Micromonospora lupini str. Lupac 08
  ORGANISM  Micromonospora lupini str. Lupac 08
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Micromonospora.
REFERENCE   1
  AUTHORS   Alonso-Vega,P., Normand,P., Bacigalupe,R., Pujic,P., Lajus,A.,
            Vallenet,D., Carro,L., Coll,P. and Trujillo,M.E.
  TITLE     Genome sequence of Micromonospora lupini Lupac 08, isolated from
            root nodules of Lupinus angustifolius
  JOURNAL   J Bacteriol 194 (15), 4135 (2012)
   PUBMED   22815450
REFERENCE   2
  AUTHORS   Trujillo,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-APR-2012) Microbiologia y Genetica, Universidad de
            Salamanca, Avda. Dres de la Reina S/N, Salamanca, E-37007, SPAIN
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAIE00000000.1.
            The Micromonospora lupini str. Lupac 08 whole genome shotgun (WGS)
            project has the project accession NZ_CAIE00000000.  This version of
            the project (01) has the accession number NZ_CAIE01000000, and
            consists of sequences CAIE01000001-CAIE01000050.
            Annotation results relative to BLAST similarities, COG
            assignations, enzymatic function prediction (PRIAM software),
            TMHMM, PsortB and SignalP predictions, and synteny conservation
            (Syntonizer software) are available in the MicroScope annotation
            platform
            http://www.genoscope.cns.fr/agc/microscope.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000297395.2-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:42:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,819
            CDSs (total)                      :: 6,725
            Genes (coding)                    :: 6,596
            CDSs (with protein)               :: 6,596
            Genes (RNA)                       :: 94
            rRNAs                             :: 3, 4, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 81
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 129
            CDSs (without protein)            :: 129
            Pseudo Genes (ambiguous residues) :: 0 of 129
            Pseudo Genes (frameshifted)       :: 58 of 129
            Pseudo Genes (incomplete)         :: 84 of 129
            Pseudo Genes (internal stop)      :: 4 of 129
            Pseudo Genes (multiple problems)  :: 16 of 129
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7321224
                     /organism="Micromonospora lupini str. Lupac 08"
                     /mol_type="genomic DNA"
                     /strain="Lupac 08"
                     /db_xref="taxon:1150864"
WGS         CAIE01000001-CAIE01000050
WGS_SCAFLD  NZ_HF570105-NZ_HF570108
//
LOCUS       NZ_JBKFGG010000000   5620565 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Paenibacillus sp. LXY-3, whole genome shotgun sequencing project.
ACCESSION   NZ_JBKFGG000000000
VERSION     NZ_JBKFGG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44702017
            Assembly: GCF_056171975.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paenibacillus sp. LXY-3
  ORGANISM  Paenibacillus sp. LXY-3
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (bases 1 to 5620565)
  AUTHORS   Wu,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2024) Institute of Science Research, China
            University of Geosciences(Beijing), Haidian, Beijing, Beijing
            100083, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBKFGG000000000.1.
            The Paenibacillus sp. LXY-3 whole genome shotgun (WGS) project has
            the project accession NZ_JBKFGG000000000.  This version of the
            project (01) has the accession number NZ_JBKFGG010000000, and
            consists of sequences JBKFGG010000001-JBKFGG010000071.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056171975.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:58:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,125
            CDSs (total)                      :: 5,027
            Genes (coding)                    :: 4,988
            CDSs (with protein)               :: 4,988
            Genes (RNA)                       :: 98
            rRNAs                             :: 2, 7, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 7, 3 (16S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 18 of 39
            Pseudo Genes (incomplete)         :: 22 of 39
            Pseudo Genes (internal stop)      :: 3 of 39
            Pseudo Genes (multiple problems)  :: 4 of 39
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5620565
                     /organism="Paenibacillus sp. LXY-3"
                     /mol_type="genomic DNA"
                     /strain="LXY-3"
                     /isolation_source="soil"
                     /db_xref="taxon:3379825"
                     /geo_loc_name="China"
                     /collection_date="2024"
WGS         JBKFGG010000001-JBKFGG010000071
WGS_SCAFLD  NZ_JBKFGG010000001-NZ_JBKFGG010000071
//
LOCUS       NZ_AJLY02000000      5488620 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mycobacteroides abscessus M24, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AJLY00000000
VERSION     NZ_AJLY00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02471408
            Assembly: GCF_000260615.2
KEYWORDS    WGS; RefSeq.
SOURCE      Mycobacteroides abscessus M24
  ORGANISM  Mycobacteroides abscessus M24
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacteroides; Mycobacteroides
            abscessus.
REFERENCE   1  (bases 1 to 5488620)
  AUTHORS   Wong,Y.L., Choo,S.W., Tan,J.L., Ong,C.S., Ng,K.P. and Ngeow,Y.F.
  TITLE     Draft genome sequence of Mycobacterium bolletii strain M24, a
            rapidly growing mycobacterium of contentious taxonomic status
  JOURNAL   J Bacteriol 194 (16), 4475 (2012)
   PUBMED   22843600
REFERENCE   2  (bases 1 to 5488620)
  AUTHORS   Ngeow,Y.F., Choo,S.W. and Wong,Y.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-JUN-2013) Faculty of Dentistry, Universiti Malaya,
            Jalan Universiti, Kuala Lumpur 50603, Malaysia
REFERENCE   3  (bases 1 to 5488620)
  AUTHORS   Ngeow,Y.F., Choo,S.W. and Wong,Y.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-APR-2012) Faculty of Dentistry, Universiti Malaya,
            Kuala Lumpur, Jalan Universiti, Kuala Lumpur, Kuala Lumpur 50603,
            Malaysia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AJLY00000000.2.
            
            On Jul 29, 2013 this sequence version replaced NZ_AJLY00000000.1.
            The Mycobacteroides abscessus M24 whole genome shotgun (WGS)
            project has the project accession NZ_AJLY00000000.  This version of
            the project (02) has the accession number NZ_AJLY02000000, and
            consists of sequences AJLY02000001-AJLY02000067.
            Bacteria available from Dr. Yun Fong Ngeow, Faculty of Medicine,
            Universiti Malaya, Kuala Lumpur 50603, Malaysia.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: CLC Genomic Workbench v. 5.1
            Assembly Name         :: M24_version02
            Genome Coverage       :: 1000.0x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000260615.2-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:17:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,599
            CDSs (total)                      :: 5,509
            Genes (coding)                    :: 5,418
            CDSs (with protein)               :: 5,418
            Genes (RNA)                       :: 90
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 91
            CDSs (without protein)            :: 91
            Pseudo Genes (ambiguous residues) :: 0 of 91
            Pseudo Genes (frameshifted)       :: 29 of 91
            Pseudo Genes (incomplete)         :: 70 of 91
            Pseudo Genes (internal stop)      :: 3 of 91
            Pseudo Genes (multiple problems)  :: 11 of 91
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5488620
                     /organism="Mycobacteroides abscessus M24"
                     /mol_type="genomic DNA"
                     /strain="M24"
                     /isolation_source="bronchoalveolar lavage sample from
                     patient with lung infection"
                     /host="Homo sapiens"
                     /db_xref="taxon:1162284"
                     /geo_loc_name="Malaysia"
                     /collection_date="2010-10-26"
WGS         AJLY02000001-AJLY02000067
WGS_SCAFLD  NZ_AJLY02000001-NZ_AJLY02000067
//
LOCUS       NZ_JRPY01000000      3206741 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mycobacterium lepromatosis strain Mx1-22A, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JRPY00000000
VERSION     NZ_JRPY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02900753
            Assembly: GCF_000966355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mycobacterium lepromatosis
  ORGANISM  Mycobacterium lepromatosis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (bases 1 to 3206741)
  AUTHORS   Singh,P., Benjak,A., Schuenemann,V.J., Herbig,A., Avanzi,C.,
            Busso,P., Nieselt,K., Krause,J., Vera-Cabrera,L. and Cole,S.T.
  TITLE     Insight into the evolution and origin of leprosy bacilli from the
            genome sequence of Mycobacterium lepromatosis
  JOURNAL   Proc Natl Acad Sci U S A 112 (14), 4459-4464 (2015)
   PUBMED   25831531
REFERENCE   2  (bases 1 to 3206741)
  AUTHORS   Singh,P., Benjak,A., Schuenemann,V., Busso,P., Avanzi,C.,
            Herbig,A., Krause,J., Vera-Cabrera,L. and Cole,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-SEP-2014) Global Health Institute, Ecole
            Polytechnique Federale de Lausanne, Station 19, Lausanne 1015,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JRPY00000000.1.
            The Mycobacterium lepromatosis whole genome shotgun (WGS) project
            has the project accession NZ_JRPY00000000.  This version of the
            project (01) has the accession number NZ_JRPY01000000, and consists
            of sequences JRPY01000001-JRPY01000126.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: SEP-2014
            Assembly Method        :: MIRA v. 4.0rc4
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 50.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000966355.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:39:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,126
            CDSs (total)                      :: 3,074
            Genes (coding)                    :: 2,365
            CDSs (with protein)               :: 2,365
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 709
            CDSs (without protein)            :: 709
            Pseudo Genes (ambiguous residues) :: 1 of 709
            Pseudo Genes (frameshifted)       :: 604 of 709
            Pseudo Genes (incomplete)         :: 293 of 709
            Pseudo Genes (internal stop)      :: 440 of 709
            Pseudo Genes (multiple problems)  :: 488 of 709
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3206741
                     /organism="Mycobacterium lepromatosis"
                     /mol_type="genomic DNA"
                     /strain="Mx1-22A"
                     /isolation_source="skin biopsy"
                     /host="Homo sapiens"
                     /db_xref="taxon:480418"
                     /geo_loc_name="Mexico: Monterrey"
                     /lat_lon="25.6890 N 100.3496 W"
                     /collection_date="2005"
                     /collected_by="Dr. Lucio Vera-Cabrera"
WGS         JRPY01000001-JRPY01000126
WGS_SCAFLD  NZ_JRPY01000001-NZ_JRPY01000126
//
LOCUS       NZ_JALN02000000      6297623 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mycolicibacterium aromaticivorans JS19b1 = JCM 16368 strain JS19b1,
            whole genome shotgun sequencing project.
ACCESSION   NZ_JALN00000000
VERSION     NZ_JALN00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02585141
            Assembly: GCF_000559085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mycolicibacterium aromaticivorans JS19b1 = JCM 16368
  ORGANISM  Mycolicibacterium aromaticivorans JS19b1 = JCM 16368
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
REFERENCE   1  (bases 1 to 6297623)
  AUTHORS   Kwak,Y., Park,G.S., Lee,S.E., Li,Q.X. and Shin,J.H.
  TITLE     Genome sequence of Mycobacterium aromaticivorans JS19b1(T), a novel
            isolate from Hawaiian soil
  JOURNAL   J Biotechnol 186, 137-138 (2014)
   PUBMED   25019926
REFERENCE   2  (bases 1 to 6297623)
  AUTHORS   Kwak,Y., Park,G.-S., Li,Q.X., Lee,S.-E. and Shin,J.-H.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAY-2014) School of Applied Biosciences, College of
            Agriculture and Life Sciences, Kyungpook National University, 80
            Daehakro, Bukgu, Daegu, Daegu 702-701, Republic of Korea
REFERENCE   3  (bases 1 to 6297623)
  AUTHORS   Kwak,Y., Park,G.-S., Li,Q.X., Lee,S.-E. and Shin,J.-H.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JAN-2014) School of Applied Biosciences, College of
            Agriculture and Life Sciences, Kyungpook National University, 80
            Daehakro, Bukgu, Daegu 702-701, Republic of Korea
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JALN00000000.2.
            The Mycolicibacterium aromaticivorans JS19b1 = JCM 16368 whole
            genome shotgun (WGS) project has the project accession
            NZ_JALN00000000.  This version of the project (02) has the
            accession number NZ_JALN02000000, and consists of sequences
            JALN02000001-JALN02000006.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: RS HGAP Assembly Protocol v. 3.3 in SMRT
                                      analysis v. 2.2.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 215.72x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000559085.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:45:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,139
            CDSs (total)                      :: 6,081
            Genes (coding)                    :: 5,952
            CDSs (with protein)               :: 5,952
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 129
            CDSs (without protein)            :: 129
            Pseudo Genes (ambiguous residues) :: 0 of 129
            Pseudo Genes (frameshifted)       :: 64 of 129
            Pseudo Genes (incomplete)         :: 80 of 129
            Pseudo Genes (internal stop)      :: 14 of 129
            Pseudo Genes (multiple problems)  :: 25 of 129
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6297623
                     /organism="Mycolicibacterium aromaticivorans JS19b1 = JCM
                     16368"
                     /mol_type="genomic DNA"
                     /strain="JS19b1"
                     /isolation_source="soil"
                     /culture_collection="DSM:45407"
                     /type_material="type strain of Mycobacterium
                     aromaticivorans"
                     /db_xref="taxon:1440774"
                     /geo_loc_name="USA: Hawaii"
                     /collection_date="2003"
WGS         JALN02000001-JALN02000006
WGS_SCAFLD  NZ_JALN02000001-NZ_JALN02000006
//
LOCUS       NZ_JBSWTX010000000   4731946 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Leisingera sp. ABM4_060, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWTX000000000
VERSION     NZ_JBSWTX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862026
            Assembly: GCF_056158765.1
KEYWORDS    WGS; RefSeq.
SOURCE      Leisingera sp. ABM4_060
  ORGANISM  Leisingera sp. ABM4_060
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Leisingera.
REFERENCE   1  (bases 1 to 4731946)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWTX000000000.1.
            The Leisingera sp. ABM4_060 whole genome shotgun (WGS) project has
            the project accession NZ_JBSWTX000000000.  This version of the
            project (01) has the accession number NZ_JBSWTX010000000, and
            consists of sequences JBSWTX010000001-JBSWTX010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 358x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056158765.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:07:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,546
            CDSs (total)                      :: 4,471
            Genes (coding)                    :: 4,409
            CDSs (with protein)               :: 4,409
            Genes (RNA)                       :: 75
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 62
            CDSs (without protein)            :: 62
            Pseudo Genes (ambiguous residues) :: 0 of 62
            Pseudo Genes (frameshifted)       :: 41 of 62
            Pseudo Genes (incomplete)         :: 30 of 62
            Pseudo Genes (internal stop)      :: 5 of 62
            Pseudo Genes (multiple problems)  :: 13 of 62
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4731946
                     /organism="Leisingera sp. ABM4_060"
                     /mol_type="genomic DNA"
                     /strain="ABM4_060"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477711"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-07-26"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWTX010000001-JBSWTX010000004
WGS_SCAFLD  NZ_JBSWTX010000001-NZ_JBSWTX010000004
//
LOCUS       NZ_NGBO01000000      2123177 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Neisseria lactamica strain NlUS07x1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NGBO00000000
VERSION     NZ_NGBO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06827272
            Assembly: GCF_002318615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Neisseria lactamica
  ORGANISM  Neisseria lactamica
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2123177)
  AUTHORS   Ma,K.C., Unemo,M., Jeverica,S., Kirkcaldy,R.D., Takahashi,H.,
            Ohnishi,M. and Grad,Y.H.
  TITLE     Genomic Characterization of Urethritis-Associated Neisseria
            meningitidis Shows that a Wide Range of N. meningitidis Strains Can
            Cause Urethritis
  JOURNAL   J Clin Microbiol 55 (12), 3374-3383 (2017)
   PUBMED   28904187
REFERENCE   2  (bases 1 to 2123177)
  AUTHORS   Ma,K.C., Unemo,M., Jeverica,S., Kirkcaldy,R.D., Takahashi,H.,
            Ohnishi,M. and Grad,Y.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-APR-2017) Department of Immunology and Infectious
            Diseases, Harvard T.H. Chan School of Public Health, 665 Huntington
            Ave, Boston, MA 02115, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NGBO00000000.1.
            The Neisseria lactamica whole genome shotgun (WGS) project has the
            project accession NZ_NGBO00000000.  This version of the project
            (01) has the accession number NZ_NGBO01000000, and consists of
            sequences NGBO01000001-NGBO01000060.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.6.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 186.005x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002318615.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:47:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,167
            CDSs (total)                      :: 2,108
            Genes (coding)                    :: 2,008
            CDSs (with protein)               :: 2,008
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 31 of 100
            Pseudo Genes (incomplete)         :: 78 of 100
            Pseudo Genes (internal stop)      :: 10 of 100
            Pseudo Genes (multiple problems)  :: 18 of 100
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2123177
                     /organism="Neisseria lactamica"
                     /mol_type="genomic DNA"
                     /strain="NlUS07x1"
                     /isolation_source="urethral swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:486"
                     /geo_loc_name="USA: Denver"
                     /collection_date="2007"
                     /collected_by="Robert D. Kirkcaldy"
WGS         NGBO01000001-NGBO01000060
WGS_SCAFLD  NZ_NGBO01000001-NZ_NGBO01000060
//
LOCUS       NZ_JBRWZQ010000000   4657295 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Lelliottia amnigena strain MEI62O-22, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRWZQ000000000
VERSION     NZ_JBRWZQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50713143
            Assembly: GCF_056155165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lelliottia amnigena
  ORGANISM  Lelliottia amnigena
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Lelliottia.
REFERENCE   1  (bases 1 to 4657295)
  AUTHORS   Spahr,Y., Collaud,A. and Perreten,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2025) Institute of Veterinary Bacteriology,
            University of Bern, Laenggassstrasse 122, Bern 3012, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRWZQ000000000.1.
            The Lelliottia amnigena whole genome shotgun (WGS) project has the
            project accession NZ_JBRWZQ000000000.  This version of the project
            (01) has the accession number NZ_JBRWZQ010000000, and consists of
            sequences JBRWZQ010000001-JBRWZQ010000003.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Autocycler v. 0.5.2; Polypolish v. 0.6.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 286.674934527446x
            Sequencing Technology  :: Oxford Nanopore MinION; Illumina NovaSeq
                                      6000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155165.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:20:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,495
            CDSs (total)                      :: 4,369
            Genes (coding)                    :: 4,313
            CDSs (with protein)               :: 4,313
            Genes (RNA)                       :: 126
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 91
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 56
            CDSs (without protein)            :: 56
            Pseudo Genes (ambiguous residues) :: 0 of 56
            Pseudo Genes (frameshifted)       :: 20 of 56
            Pseudo Genes (incomplete)         :: 42 of 56
            Pseudo Genes (internal stop)      :: 12 of 56
            Pseudo Genes (multiple problems)  :: 14 of 56
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4657295
                     /organism="Lelliottia amnigena"
                     /mol_type="genomic DNA"
                     /strain="MEI62O-22"
                     /isolation_source="Soil surface"
                     /db_xref="taxon:61646"
                     /geo_loc_name="Switzerland: Bern"
                     /collection_date="2022-06"
                     /collected_by="Veterinary staff"
WGS         JBRWZQ010000001-JBRWZQ010000003
WGS_SCAFLD  NZ_CM149555
WGS_SCAFLD  NZ_JBRWZQ010000002-NZ_JBRWZQ010000003
//
LOCUS       NZ_JBRXAN010000000   4576439 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Lelliottia amnigena strain MEI2A-1023, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBRXAN000000000
VERSION     NZ_JBRXAN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50713120
            Assembly: GCF_056157825.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lelliottia amnigena
  ORGANISM  Lelliottia amnigena
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Lelliottia.
REFERENCE   1  (bases 1 to 4576439)
  AUTHORS   Spahr,Y., Collaud,A. and Perreten,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-OCT-2025) Institute of Veterinary Bacteriology,
            University of Bern, Laenggassstrasse 122, Bern 3012, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRXAN000000000.1.
            The Lelliottia amnigena whole genome shotgun (WGS) project has the
            project accession NZ_JBRXAN000000000.  This version of the project
            (01) has the accession number NZ_JBRXAN010000000, and consists of
            sequences JBRXAN010000001-JBRXAN010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Autocycler v. 0.5.2; Polypolish v. 0.6.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 169.527254902775x
            Sequencing Technology  :: Oxford Nanopore MinION; Illumina NovaSeq
                                      6000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157825.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:05:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,401
            CDSs (total)                      :: 4,278
            Genes (coding)                    :: 4,226
            CDSs (with protein)               :: 4,226
            Genes (RNA)                       :: 123
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 20 of 52
            Pseudo Genes (incomplete)         :: 39 of 52
            Pseudo Genes (internal stop)      :: 11 of 52
            Pseudo Genes (multiple problems)  :: 14 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4576439
                     /organism="Lelliottia amnigena"
                     /mol_type="genomic DNA"
                     /strain="MEI2A-1023"
                     /isolation_source="Soil surface"
                     /db_xref="taxon:61646"
                     /geo_loc_name="Switzerland: Bern"
                     /collection_date="2023-10"
                     /collected_by="Veterinary staff"
WGS         JBRXAN010000001-JBRXAN010000002
WGS_SCAFLD  NZ_CM149597
WGS_SCAFLD  NZ_JBRXAN010000002
//
LOCUS       NZ_RBAK01000000      6970905 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Micromonospora endolithica strain JCM 12677, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RBAK00000000
VERSION     NZ_RBAK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10141349
            Assembly: GCF_003626595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Micromonospora endolithica
  ORGANISM  Micromonospora endolithica
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Micromonospora.
REFERENCE   1  (bases 1 to 6970905)
  AUTHORS   Hirsch,P., Mevs,U., Kroppenstedt,R.M., Schumann,P. and
            Stackebrandt,E.
  TITLE     Cryptoendolithic actinomycetes from antarctic sandstone rock
            samples: Micromonospora endolithica sp. nov. and two isolates
            related to Micromonospora coerulea Jensen 1932
  JOURNAL   Syst Appl Microbiol 27 (2), 166-174 (2004)
   PUBMED   15046305
REFERENCE   2  (bases 1 to 6970905)
  AUTHORS   Kuncharoen,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-SEP-2018) Biochemistry and Microbiology, Faculty of
            Pharmaceutical Sciences, Chulalongkorn University, 254 Phyathai
            Rd., Bangkok, Bangkok 10330, Thailand
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RBAK00000000.1.
            The Micromonospora endolithica whole genome shotgun (WGS) project
            has the project accession NZ_RBAK00000000.  This version of the
            project (01) has the accession number NZ_RBAK01000000, and consists
            of sequences RBAK01000001-RBAK01000040.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 500x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003626595.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:16:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,545
            CDSs (total)                      :: 6,478
            Genes (coding)                    :: 6,355
            CDSs (with protein)               :: 6,355
            Genes (RNA)                       :: 67
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 58
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 32 of 123
            Pseudo Genes (incomplete)         :: 103 of 123
            Pseudo Genes (internal stop)      :: 9 of 123
            Pseudo Genes (multiple problems)  :: 19 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6970905
                     /organism="Micromonospora endolithica"
                     /mol_type="genomic DNA"
                     /strain="JCM 12677"
                     /isolation_source="Sandstone Rock"
                     /host="Rock"
                     /type_material="type strain of Micromonospora endolithica"
                     /db_xref="taxon:230091"
                     /geo_loc_name="Germany: antarctic ocean"
                     /collection_date="2004"
WGS         RBAK01000001-RBAK01000040
WGS_SCAFLD  NZ_RBAK01000001-NZ_RBAK01000040
//
LOCUS       NZ_JBVTTY010000000   4661226 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Paenarthrobacter sp. TRD_SC_7, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBVTTY000000000
VERSION     NZ_JBVTTY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52392037
            Assembly: GCF_056156245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paenarthrobacter sp. TRD_SC_7
  ORGANISM  Paenarthrobacter sp. TRD_SC_7
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Paenarthrobacter.
REFERENCE   1  (bases 1 to 4661226)
  AUTHORS   Chatterjee,S., Dutta,S. and Ghosh,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-JAN-2026) Department of Biological Sciences, Bose
            Institute, Salt Lake, EN Block, Sector V, Kolkata 700091, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBVTTY000000000.1.
            The Paenarthrobacter sp. TRD_SC_7 whole genome shotgun (WGS)
            project has the project accession NZ_JBVTTY000000000.  This version
            of the project (01) has the accession number NZ_JBVTTY010000000,
            and consists of sequence JBVTTY010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.5.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 791.14x
            Sequencing Technology  :: Illumina; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056156245.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:22:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,441
            CDSs (total)                      :: 4,365
            Genes (coding)                    :: 4,311
            CDSs (with protein)               :: 4,311
            Genes (RNA)                       :: 76
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 19 of 54
            Pseudo Genes (incomplete)         :: 35 of 54
            Pseudo Genes (internal stop)      :: 7 of 54
            Pseudo Genes (multiple problems)  :: 7 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4661226
                     /organism="Paenarthrobacter sp. TRD_SC_7"
                     /mol_type="genomic DNA"
                     /strain="TRD_SC_7"
                     /isolation_source="TsoMoriri Rock Dust"
                     /db_xref="taxon:3469945"
                     /geo_loc_name="India: TsoMoriri Lake, Ladakh"
                     /collection_date="2021-10-28"
WGS         JBVTTY010000001
WGS_SCAFLD  NZ_CM149587
//
LOCUS       NZ_AJMA01000000      4794504 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mycobacteroides abscessus M154, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AJMA00000000
VERSION     NZ_AJMA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02471414
            Assembly: GCF_000260575.2
KEYWORDS    WGS; RefSeq.
SOURCE      Mycobacteroides abscessus M154
  ORGANISM  Mycobacteroides abscessus M154
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacteroides; Mycobacteroides
            abscessus.
REFERENCE   1  (bases 1 to 4794504)
  AUTHORS   Choo,S.W., Wong,Y.L., Tan,J.L., Ong,C.S., Wong,G.J., Ng,K.P. and
            Ngeow,Y.F.
  TITLE     Annotated genome sequence of Mycobacterium massiliense strain M154,
            belonging to the recently created taxon Mycobacterium abscessus
            subsp. bolletii comb. nov
  JOURNAL   J Bacteriol 194 (17), 4778 (2012)
   PUBMED   22887675
REFERENCE   2  (bases 1 to 4794504)
  AUTHORS   Ngeow,Y.F., Choo,S.W. and Wong,Y.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-APR-2012) Faculty of Dentistry, Universiti Malaya,
            Kuala Lumpur, Jalan Universiti, Kuala Lumpur, Kuala Lumpur 50603,
            Malaysia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AJMA00000000.1.
            
            On Nov 9, 2015 this sequence version replaced gi:484081204.
            The Mycobacteroides abscessus M154 whole genome shotgun (WGS)
            project has the project accession NZ_AJMA00000000.  This version of
            the project (01) has the accession number NZ_AJMA01000000, and
            consists of sequences AJMA01000032-AJMA01000041.
            Bacteria available from: Dr. Yun Fong Ngeow, Faculty of Medicine,
            Universiti Malaya, Kuala Lumpur, Kuala Lumpur 50603, Malaysia.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: CLCBio Workbench v. 5.0
            Genome Coverage       :: 120.0x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000260575.2-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:08:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,720
            CDSs (total)                      :: 4,669
            Genes (coding)                    :: 4,598
            CDSs (with protein)               :: 4,598
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 37 of 71
            Pseudo Genes (incomplete)         :: 46 of 71
            Pseudo Genes (internal stop)      :: 1 of 71
            Pseudo Genes (multiple problems)  :: 12 of 71
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4794504
                     /organism="Mycobacteroides abscessus M154"
                     /mol_type="genomic DNA"
                     /strain="M154"
                     /isolation_source="sputum sample from a patient with lung
                     infection"
                     /host="Homo sapiens"
                     /db_xref="taxon:1162288"
                     /geo_loc_name="Malaysia"
                     /collection_date="2010-10-26"
WGS         AJMA01000001-AJMA01000030
WGS         AJMA01000032-AJMA01000041
WGS_SCAFLD  NZ_AJMA01000001-NZ_AJMA01000030
WGS_SCAFLD  NZ_AJMA01000032-NZ_AJMA01000041
//
LOCUS       NZ_CBDBYK010000000   1073607 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mycoplasma marinum strain CIP111404T isolate CIP111404T, whole
            genome shotgun sequencing project.
ACCESSION   NZ_CBDBYK000000000
VERSION     NZ_CBDBYK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117660579
            Assembly: GCF_965212725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mycoplasma marinum
  ORGANISM  Mycoplasma marinum
            Bacteria; Bacillati; Mycoplasmatota; Mollicutes; Mycoplasmataceae;
            Mycoplasma.
REFERENCE   1  (bases 1 to 1073607)
  AUTHORS   Palma,F., Chouali,H., Bouchier,C., Chesneau,O., Muhle,E.,
            Clermont,D. and Criscuolo,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAR-2025) CIP, 25-28, rue du Docteur Roux, 75015
            Paris, France
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBDBYK000000000.1.
            The Mycoplasma marinum whole genome shotgun (WGS) project has the
            project accession NZ_CBDBYK000000000.  This version of the project
            (01) has the accession number NZ_CBDBYK010000000, and consists of
            sequences CBDBYK010000001-CBDBYK010000045.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_965212725.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:26:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 911
            CDSs (total)                      :: 873
            Genes (coding)                    :: 863
            CDSs (with protein)               :: 863
            Genes (RNA)                       :: 38
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 0 of 10
            Pseudo Genes (incomplete)         :: 10 of 10
            Pseudo Genes (internal stop)      :: 0 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1073607
                     /organism="Mycoplasma marinum"
                     /mol_type="genomic DNA"
                     /strain="CIP111404T"
                     /isolate="CIP111404T"
                     /type_material="type strain of Mycoplasma marinum"
                     /db_xref="taxon:1937190"
WGS         CBDBYK010000001-CBDBYK010000045
WGS_SCAFLD  NZ_CBDBYK010000001-NZ_CBDBYK010000045
//
LOCUS       NZ_JBSWTV010000000   4837461 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Leisingera sp. ABM4_101, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWTV000000000
VERSION     NZ_JBSWTV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862028
            Assembly: GCF_056158725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Leisingera sp. ABM4_101
  ORGANISM  Leisingera sp. ABM4_101
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Leisingera.
REFERENCE   1  (bases 1 to 4837461)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWTV000000000.1.
            The Leisingera sp. ABM4_101 whole genome shotgun (WGS) project has
            the project accession NZ_JBSWTV000000000.  This version of the
            project (01) has the accession number NZ_JBSWTV010000000, and
            consists of sequences JBSWTV010000001-JBSWTV010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 329x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056158725.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:15:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,624
            CDSs (total)                      :: 4,551
            Genes (coding)                    :: 4,506
            CDSs (with protein)               :: 4,506
            Genes (RNA)                       :: 73
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 45
            CDSs (without protein)            :: 45
            Pseudo Genes (ambiguous residues) :: 0 of 45
            Pseudo Genes (frameshifted)       :: 23 of 45
            Pseudo Genes (incomplete)         :: 28 of 45
            Pseudo Genes (internal stop)      :: 7 of 45
            Pseudo Genes (multiple problems)  :: 11 of 45
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4837461
                     /organism="Leisingera sp. ABM4_101"
                     /mol_type="genomic DNA"
                     /strain="ABM4_101"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477710"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-07-26"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWTV010000001-JBSWTV010000004
WGS_SCAFLD  NZ_JBSWTV010000001-NZ_JBSWTV010000004
//
LOCUS       NZ_AJGG01000000      5090110 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mycobacteroides abscessus M94, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AJGG00000000
VERSION     NZ_AJGG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02471416
            Assembly: GCF_000257245.2
KEYWORDS    WGS; RefSeq.
SOURCE      Mycobacteroides abscessus M94
  ORGANISM  Mycobacteroides abscessus M94
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacteroides; Mycobacteroides
            abscessus.
REFERENCE   1  (bases 1 to 5090110)
  AUTHORS   Choo,S.W., Wong,Y.L., Leong,M.L., Heydari,H., Ong,C.S., Ng,K.P. and
            Ngeow,Y.F.
  TITLE     Analysis of the genome of Mycobacterium abscessus strain M94
            reveals an uncommon cluster of tRNAs
  JOURNAL   J Bacteriol 194 (20), 5724 (2012)
   PUBMED   23012295
REFERENCE   2  (bases 1 to 5090110)
  AUTHORS   Ngeow,Y.F., Choo,S.W. and Wong,Y.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-MAR-2012) Faculty of Dentistry, Universiti Malaya,
            Kuala Lumpur, Jalan Universiti, Kuala Lumpur, Kuala Lumpur 50603,
            Malaysia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AJGG00000000.1.
            
            On Nov 9, 2015 this sequence version replaced gi:419717898.
            The Mycobacteroides abscessus M94 whole genome shotgun (WGS)
            project has the project accession NZ_AJGG00000000.  This version of
            the project (01) has the accession number NZ_AJGG01000000, and
            consists of sequences AJGG01000070-AJGG01000083.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            Bacteria from: Dr. Lawrence Choo Siew Woh, Universiti Malaya, Kuala
            Lumpur, Malaysia.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: CLCBio Workbench v. 5.0
            Genome Coverage       :: 32x
            Sequencing Technology :: Illumina GAII
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000257245.2-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:13:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,129
            CDSs (total)                      :: 5,062
            Genes (coding)                    :: 4,834
            CDSs (with protein)               :: 4,834
            Genes (RNA)                       :: 67
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 228
            CDSs (without protein)            :: 228
            Pseudo Genes (ambiguous residues) :: 0 of 228
            Pseudo Genes (frameshifted)       :: 176 of 228
            Pseudo Genes (incomplete)         :: 61 of 228
            Pseudo Genes (internal stop)      :: 1 of 228
            Pseudo Genes (multiple problems)  :: 10 of 228
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5090110
                     /organism="Mycobacteroides abscessus M94"
                     /mol_type="genomic DNA"
                     /strain="M94"
                     /isolation_source="sputum of a patient with lung
                     infections"
                     /host="Homo sapiens"
                     /db_xref="taxon:1158135"
WGS         AJGG01000001-AJGG01000068
WGS         AJGG01000070-AJGG01000083
WGS_SCAFLD  NZ_AJGG01000001-NZ_AJGG01000068
WGS_SCAFLD  NZ_AJGG01000070-NZ_AJGG01000083
//
LOCUS       NZ_JBSWTD010000000   4221525 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Neorhizobium sp. AWJ4_264, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWTD000000000
VERSION     NZ_JBSWTD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862047
            Assembly: GCF_056158345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Neorhizobium sp. AWJ4_264
  ORGANISM  Neorhizobium sp. AWJ4_264
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Neorhizobium.
REFERENCE   1  (bases 1 to 4221525)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWTD000000000.1.
            The Neorhizobium sp. AWJ4_264 whole genome shotgun (WGS) project
            has the project accession NZ_JBSWTD000000000.  This version of the
            project (01) has the accession number NZ_JBSWTD010000000, and
            consists of sequences JBSWTD010000001-JBSWTD010000006.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 716x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056158345.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:09:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,182
            CDSs (total)                      :: 4,119
            Genes (coding)                    :: 4,076
            CDSs (with protein)               :: 4,076
            Genes (RNA)                       :: 63
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 21 of 43
            Pseudo Genes (incomplete)         :: 25 of 43
            Pseudo Genes (internal stop)      :: 4 of 43
            Pseudo Genes (multiple problems)  :: 5 of 43
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4221525
                     /organism="Neorhizobium sp. AWJ4_264"
                     /mol_type="genomic DNA"
                     /strain="AWJ4_264"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477695"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-10-31"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWTD010000001-JBSWTD010000006
WGS_SCAFLD  NZ_JBSWTD010000001-NZ_JBSWTD010000006
//
LOCUS       NZ_JBSWTU010000000   5375830 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Leisingera sp. ABM4_103, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWTU000000000
VERSION     NZ_JBSWTU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862029
            Assembly: GCF_056158685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Leisingera sp. ABM4_103
  ORGANISM  Leisingera sp. ABM4_103
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Leisingera.
REFERENCE   1  (bases 1 to 5375830)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWTU000000000.1.
            The Leisingera sp. ABM4_103 whole genome shotgun (WGS) project has
            the project accession NZ_JBSWTU000000000.  This version of the
            project (01) has the accession number NZ_JBSWTU010000000, and
            consists of sequences JBSWTU010000001-JBSWTU010000012.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 320x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056158685.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:28:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,189
            CDSs (total)                      :: 5,110
            Genes (coding)                    :: 5,026
            CDSs (with protein)               :: 5,026
            Genes (RNA)                       :: 79
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 84
            CDSs (without protein)            :: 84
            Pseudo Genes (ambiguous residues) :: 0 of 84
            Pseudo Genes (frameshifted)       :: 35 of 84
            Pseudo Genes (incomplete)         :: 52 of 84
            Pseudo Genes (internal stop)      :: 23 of 84
            Pseudo Genes (multiple problems)  :: 21 of 84
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5375830
                     /organism="Leisingera sp. ABM4_103"
                     /mol_type="genomic DNA"
                     /strain="ABM4_103"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477709"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-07-26"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWTU010000001-JBSWTU010000012
WGS_SCAFLD  NZ_JBSWTU010000001-NZ_JBSWTU010000012
//
LOCUS       NZ_JBSWXD010000000   6863745 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Micromonospora sp. ABR4_055, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWXD000000000
VERSION     NZ_JBSWXD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861929
            Assembly: GCF_056160425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Micromonospora sp. ABR4_055
  ORGANISM  Micromonospora sp. ABR4_055
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Micromonospora.
REFERENCE   1  (bases 1 to 6863745)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWXD000000000.1.
            The Micromonospora sp. ABR4_055 whole genome shotgun (WGS) project
            has the project accession NZ_JBSWXD000000000.  This version of the
            project (01) has the accession number NZ_JBSWXD010000000, and
            consists of sequences JBSWXD010000001-JBSWXD010000389.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 95x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056160425.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:11:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,500
            CDSs (total)                      :: 6,445
            Genes (coding)                    :: 6,203
            CDSs (with protein)               :: 6,203
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 2 (16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 242
            CDSs (without protein)            :: 242
            Pseudo Genes (ambiguous residues) :: 0 of 242
            Pseudo Genes (frameshifted)       :: 39 of 242
            Pseudo Genes (incomplete)         :: 215 of 242
            Pseudo Genes (internal stop)      :: 7 of 242
            Pseudo Genes (multiple problems)  :: 18 of 242
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6863745
                     /organism="Micromonospora sp. ABR4_055"
                     /mol_type="genomic DNA"
                     /strain="ABR4_055"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477752"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWXD010000001-JBSWXD010000389
WGS_SCAFLD  NZ_JBSWXD010000001-NZ_JBSWXD010000389
//
LOCUS       NZ_JBUXJM010000000   4153555 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Oerskovia sp. PE-21s, whole genome shotgun sequencing project.
ACCESSION   NZ_JBUXJM000000000
VERSION     NZ_JBUXJM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53056906
            Assembly: GCF_056158145.1
KEYWORDS    WGS; RefSeq.
SOURCE      Oerskovia sp. PE-21s
  ORGANISM  Oerskovia sp. PE-21s
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Cellulomonadaceae; Oerskovia.
REFERENCE   1  (bases 1 to 4153555)
  AUTHORS   Kim,S.-J., Park,C., Cho,E., Yu,H., Ryu,J. and Nam,I.-H.
  TITLE     Genome sequence of Oerskovia sp. PE-21s
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4153555)
  AUTHORS   Kim,S.-J., Park,C., Cho,E., Yu,H., Ryu,J. and Nam,I.-H.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-DEC-2025) Mineral Resource Research Division, Korea
            Institute of Geoscience and Mineral Resources, 124 Gwahak-ro,
            Yuseong-gu, Daejeon 34132, South Korea
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBUXJM000000000.1.
            The Oerskovia sp. PE-21s whole genome shotgun (WGS) project has the
            project accession NZ_JBUXJM000000000.  This version of the project
            (01) has the accession number NZ_JBUXJM010000000, and consists of
            sequences JBUXJM010000001-JBUXJM010000019.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Korea Institute of
            Geoscience and Mineral Resources.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. OCT-2025
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1626.4x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056158145.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:03:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,762
            CDSs (total)                      :: 3,703
            Genes (coding)                    :: 3,689
            CDSs (with protein)               :: 3,689
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 14
            CDSs (without protein)            :: 14
            Pseudo Genes (ambiguous residues) :: 0 of 14
            Pseudo Genes (frameshifted)       :: 2 of 14
            Pseudo Genes (incomplete)         :: 11 of 14
            Pseudo Genes (internal stop)      :: 1 of 14
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4153555
                     /organism="Oerskovia sp. PE-21s"
                     /mol_type="genomic DNA"
                     /strain="PE-21s"
                     /isolation_source="landfill"
                     /db_xref="taxon:3470085"
                     /geo_loc_name="South Korea: Pyeongtaek"
                     /collection_date="2022-06"
WGS         JBUXJM010000001-JBUXJM010000019
WGS_SCAFLD  NZ_JBUXJM010000001-NZ_JBUXJM010000019
//
LOCUS       NZ_JBSWYB010000000   4924911 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Leisingera sp. ABD4_442, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWYB000000000
VERSION     NZ_JBSWYB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861904
            Assembly: GCF_056160905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Leisingera sp. ABD4_442
  ORGANISM  Leisingera sp. ABD4_442
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Leisingera.
REFERENCE   1  (bases 1 to 4924911)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWYB000000000.1.
            The Leisingera sp. ABD4_442 whole genome shotgun (WGS) project has
            the project accession NZ_JBSWYB000000000.  This version of the
            project (01) has the accession number NZ_JBSWYB010000000, and
            consists of sequences JBSWYB010000001-JBSWYB010000119.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 71x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056160905.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:50:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,728
            CDSs (total)                      :: 4,667
            Genes (coding)                    :: 4,606
            CDSs (with protein)               :: 4,606
            Genes (RNA)                       :: 61
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 61
            CDSs (without protein)            :: 61
            Pseudo Genes (ambiguous residues) :: 0 of 61
            Pseudo Genes (frameshifted)       :: 14 of 61
            Pseudo Genes (incomplete)         :: 51 of 61
            Pseudo Genes (internal stop)      :: 6 of 61
            Pseudo Genes (multiple problems)  :: 10 of 61
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4924911
                     /organism="Leisingera sp. ABD4_442"
                     /mol_type="genomic DNA"
                     /strain="ABD4_442"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477769"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-11-21"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWYB010000001-JBSWYB010000119
WGS_SCAFLD  NZ_JBSWYB010000001-NZ_JBSWYB010000119
//
LOCUS       NZ_AWWH01000000      2175589 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Ligilactobacillus equi DPC 6820, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AWWH00000000
VERSION     NZ_AWWH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02404457
            Assembly: GCF_000504525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ligilactobacillus equi DPC 6820
  ORGANISM  Ligilactobacillus equi DPC 6820
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Ligilactobacillus.
REFERENCE   1  (bases 1 to 2175589)
  AUTHORS   O'Donnell,M.M., Harris,H.M., O'Toole,P.W. and Ross,R.P.
  TITLE     The Genome of the Predominant Equine Lactobacillus Species,
            Lactobacillus equi, Is Reflective of Its Lifestyle Adaptations to
            an Herbivorous Host
  JOURNAL   Genome Announc 2 (1), e01155-13 (2014)
   PUBMED   24435863
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2175589)
  AUTHORS   O' Donnell,M.M., Harris,H.M.B., Younge,B., Ross,R.P. and O'
            Toole,P.W.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2013) Food Biosciences, Teagasc Food Research
            Centre, Moorepark, Fermoy, Ireland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AWWH00000000.1.
            The Ligilactobacillus equi DPC 6820 whole genome shotgun (WGS)
            project has the project accession NZ_AWWH00000000.  This version of
            the project (01) has the accession number NZ_AWWH01000000, and
            consists of sequences AWWH01000001-AWWH01000203.
            Bacteria available from DPC culture collection, Teagasc Food
            Research Centre, Moorepark, Ireland. Source DNA available from DPC
            culture collection, Teagasc Food Research Centre, Moorepark,
            Ireland.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.2.07
            Genome Coverage       :: 1608.0x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000504525.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:54:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,253
            CDSs (total)                      :: 2,190
            Genes (coding)                    :: 2,136
            CDSs (with protein)               :: 2,136
            Genes (RNA)                       :: 63
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 2, 3 (5S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 13 of 54
            Pseudo Genes (incomplete)         :: 39 of 54
            Pseudo Genes (internal stop)      :: 11 of 54
            Pseudo Genes (multiple problems)  :: 7 of 54
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2175589
                     /organism="Ligilactobacillus equi DPC 6820"
                     /mol_type="genomic DNA"
                     /strain="DPC 6820"
                     /isolation_source="Horse GIT"
                     /host="horse"
                     /db_xref="taxon:1392007"
                     /geo_loc_name="Ireland"
                     /collection_date="2010"
WGS         AWWH01000001-AWWH01000203
WGS_SCAFLD  NZ_AWWH01000001-NZ_AWWH01000203
//
LOCUS       NZ_JBSWTA010000000   4273566 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Marinomonas sp. AWM4_232, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWTA000000000
VERSION     NZ_JBSWTA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862050
            Assembly: GCF_056158325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Marinomonas sp. AWM4_232
  ORGANISM  Marinomonas sp. AWM4_232
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Oceanospirillaceae; Marinomonas.
REFERENCE   1  (bases 1 to 4273566)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWTA000000000.1.
            The Marinomonas sp. AWM4_232 whole genome shotgun (WGS) project has
            the project accession NZ_JBSWTA000000000.  This version of the
            project (01) has the accession number NZ_JBSWTA010000000, and
            consists of sequences JBSWTA010000001-JBSWTA010000021.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1172x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056158325.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:04:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,101
            CDSs (total)                      :: 3,970
            Genes (coding)                    :: 3,928
            CDSs (with protein)               :: 3,928
            Genes (RNA)                       :: 131
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 103
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 12 of 42
            Pseudo Genes (incomplete)         :: 30 of 42
            Pseudo Genes (internal stop)      :: 6 of 42
            Pseudo Genes (multiple problems)  :: 5 of 42
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4273566
                     /organism="Marinomonas sp. AWM4_232"
                     /mol_type="genomic DNA"
                     /strain="AWM4_232"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477693"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-10-31"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWTA010000001-JBSWTA010000021
WGS_SCAFLD  NZ_JBSWTA010000001-NZ_JBSWTA010000021
//
LOCUS       NZ_AKWY02000000      4710917 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Leptospira noguchii serovar Panama str. CZ214, whole genome shotgun
            sequencing project.
ACCESSION   NZ_AKWY00000000
VERSION     NZ_AKWY00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02436411
            Assembly: GCF_000306255.2
KEYWORDS    WGS; IMPROVED_HIGH_QUALITY_DRAFT; RefSeq.
SOURCE      Leptospira noguchii serovar Panama str. CZ214
  ORGANISM  Leptospira noguchii serovar Panama str. CZ214
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Leptospirales; Leptospiraceae; Leptospira.
REFERENCE   1  (bases 1 to 4710917)
  AUTHORS   Harkins,D.M., Durkin,A.S., Brinkac,L.M., Haft,D.H., Selengut,J.D.,
            Sanka,R., DePew,J., Purushe,J., Hartskeerl,R.A., Ahmed,A., van der
            Linden,H., Goris,M.G.A., Vinetz,J.M., Sutton,G.G., Nierman,W.C. and
            Fouts,D.E.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAY-2013) J. Craig Venter Institute, 9704 Medical
            Center Drive, Rockville, MD 20850, USA
REFERENCE   2  (bases 1 to 4710917)
  AUTHORS   Hartskeerl,R.A., Ahmed,A., Linden,H., Goris,M., Harkins,D.M.,
            Hostetler,J., Madupu,R., DePew,J., Sanka,R., Selengut,J.,
            Sutton,G., Vinetz,J.M. and Fouts,D.E.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JUN-2012) The J. Craig Venter Institute, 9704 Medical
            Center Dr., Rockville, MD 20850, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AKWY00000000.2.
            
            On Sep 3, 2013 this sequence version replaced NZ_AKWY00000000.1.
            The Leptospira noguchii serovar Panama str. CZ214 whole genome
            shotgun (WGS) project has the project accession NZ_AKWY00000000.
            This version of the project (02) has the accession number
            NZ_AKWY02000000, and consists of sequences
            AKWY02000001-AKWY02000035.
            This strain is part of the Leptospira Genomics and Human Health
            project as part of the Genome Sequencing Centers for Infectious
            Diseases contract.
            http://gsc.jcvi.org/projects/gsc/leptospira/index.shtml.
            
            Source DNA and/or bacteria are available from the BEI Resource
            repository.  http://beiresources.org
            
            This project has been funded in whole or in part with federal funds
            from the National Institute of Allergy and Infectious Diseases,
            National Institutes of Health, Department of Health and Human
            Services through the Genomic Sequencing Centers for Infectious
            Diseases under contract number HHSN272200900007C.
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: Improved High-Quality Draft
            Current Finishing Status :: Improved High-Quality Draft
            Assembly Method          :: Celera Assembler v. 7.0
            Assembly Name            :: gls454059v02
            Long Assembly Name       :: Leptospira noguchii serovar Panama str.
                                        CZ214 v02
            Genome Coverage          :: 56.2x
            Sequencing Technology    :: 454 GS-FLX Titanium; Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000306255.2-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:02:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,063
            CDSs (total)                      :: 4,019
            Genes (coding)                    :: 3,802
            CDSs (with protein)               :: 3,802
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 3, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 217
            CDSs (without protein)            :: 217
            Pseudo Genes (ambiguous residues) :: 0 of 217
            Pseudo Genes (frameshifted)       :: 155 of 217
            Pseudo Genes (incomplete)         :: 107 of 217
            Pseudo Genes (internal stop)      :: 42 of 217
            Pseudo Genes (multiple problems)  :: 71 of 217
            CRISPR Arrays                     :: 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4710917
                     /organism="Leptospira noguchii serovar Panama str. CZ214"
                     /mol_type="genomic DNA"
                     /strain="CZ214"
                     /serovar="Panama"
                     /host="Didelphis marsupialis"
                     /type_material="type strain of Leptospira noguchii"
                     /db_xref="taxon:1001595"
                     /geo_loc_name="Panama: Canal Zone"
WGS         AKWY02000001-AKWY02000035
WGS_SCAFLD  NZ_AKWY02000001-NZ_AKWY02000035
//
LOCUS       NZ_AHMM02000000      4457871 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Leptospira inadai serovar Lyme str. 10, whole genome shotgun
            sequencing project.
ACCESSION   NZ_AHMM00000000
VERSION     NZ_AHMM00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02436595
            Assembly: GCF_000243675.2
KEYWORDS    WGS; IMPROVED_HIGH_QUALITY_DRAFT; RefSeq.
SOURCE      Leptospira inadai serovar Lyme str. 10
  ORGANISM  Leptospira inadai serovar Lyme str. 10
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Leptospirales; Leptospiraceae; Leptospira.
REFERENCE   1  (bases 1 to 4457871)
  AUTHORS   Harkins,D.M., Durkin,A.S., Brinkac,L.M., Haft,D.H., Selengut,J.D.,
            Sanka,R., DePew,J., Purushe,J., Hartskeerl,R.A., Ahmed,A., van der
            Linden,H., Goris,M.G.A., Vinetz,J.M., Sutton,G.G., Nierman,W.C. and
            Fouts,D.E.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAY-2013) J. Craig Venter Institute, 9704 Medical
            Center Drive, Rockville, MD 20850, USA
REFERENCE   2  (bases 1 to 4457871)
  AUTHORS   Hartskeerl,R.A., Ahmed,A., Linden,H., Goris,M., Harkins,D.M.,
            Purushe,J., Sanka,R.K., Selengut,J., Sutton,G., Vinetz,J.M. and
            Fouts,D.E.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-OCT-2011) The J. Craig Venter Institute, 9704 Medical
            Center Dr., Rockville, MD 20850, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AHMM00000000.2.
            
            On Sep 3, 2013 this sequence version replaced NZ_AHMM00000000.1.
            The Leptospira inadai serovar Lyme str. 10 whole genome shotgun
            (WGS) project has the project accession NZ_AHMM00000000.  This
            version of the project (02) has the accession number
            NZ_AHMM02000000, and consists of sequences
            AHMM02000001-AHMM02000027.
            This strain is part of the Leptospira Genomics and Human Health
            project as part of the Genome Sequencing Centers for Infectious
            Diseases contract.
            http://gsc.jcvi.org/projects/gsc/leptospira/index.shtml.
            
            Source DNA and/or bacteria are available from the BEI Resource
            repository.  http://beiresources.org
            
            This project has been funded in whole or in part with federal funds
            from the National Institute of Allergy and Infectious Diseases,
            National Institutes of Health, Department of Health and Human
            Services through the Genomic Sequencing Centers for Infectious
            Diseases under contract number HHSN272200900007C.
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: Improved High-Quality Draft
            Current Finishing Status :: Improved High-Quality Draft
            Assembly Method          :: Celera Assembler v. 7.0
            Assembly Name            :: gls454047v02
            Long Assembly Name       :: Leptospira inadai serovar Lyme str. 10
                                        v02
            Genome Coverage          :: 55.9x
            Sequencing Technology    :: 454 GS-FLX Titanium; Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000243675.2-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:04:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,004
            CDSs (total)                      :: 3,956
            Genes (coding)                    :: 3,904
            CDSs (with protein)               :: 3,904
            Genes (RNA)                       :: 48
            rRNAs                             :: 2, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 39
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 20 of 52
            Pseudo Genes (incomplete)         :: 32 of 52
            Pseudo Genes (internal stop)      :: 9 of 52
            Pseudo Genes (multiple problems)  :: 8 of 52
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4457871
                     /organism="Leptospira inadai serovar Lyme str. 10"
                     /mol_type="genomic DNA"
                     /strain="10"
                     /serovar="Lyme"
                     /host="Homo sapiens"
                     /type_material="type strain of Leptospira inadai"
                     /db_xref="taxon:1049790"
                     /geo_loc_name="USA"
WGS         AHMM02000001-AHMM02000027
WGS_SCAFLD  NZ_AHMM02000001-NZ_AHMM02000027
//
LOCUS       NZ_JMHU01000000      1851282 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Ligilactobacillus animalis strain 381-IL-28, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JMHU00000000
VERSION     NZ_JMHU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02725516
            Assembly: GCF_000685785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ligilactobacillus animalis
  ORGANISM  Ligilactobacillus animalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Ligilactobacillus.
REFERENCE   1  (bases 1 to 1851282)
  AUTHORS   Sturino,J.M., Rajendran,M. and Altermann,E.
  TITLE     Draft Genome Sequence of Lactobacillus animalis 381-IL-28
  JOURNAL   Genome Announc 2 (3), e00478-14 (2014)
   PUBMED   24874675
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1851282)
  AUTHORS   Sturino,J.M., Rajendran,M. and Altermann,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-APR-2014) Nutrition and Food Science Department,
            Texas A&M University, 214C Cater-Mattil Research Center, College
            Station, TX 77843-2253, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JMHU00000000.1.
            The Ligilactobacillus animalis whole genome shotgun (WGS) project
            has the project accession NZ_JMHU00000000.  This version of the
            project (01) has the accession number NZ_JMHU01000000, and consists
            of sequences JMHU01000001-JMHU01000030.
            Bacteria and source DNA are available from: Dr. Joseph M. Sturino,
            Nutrition and Food Science Department, Texas A&M University, 214C
            Cater-Mattil Research Center, College Station, TX 77843-2253, USA.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet Optimiser v. 2.2.5
            Genome Coverage       :: 110.0x
            Sequencing Technology :: Illumina; IonTorrent
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000685785.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:07:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,910
            CDSs (total)                      :: 1,842
            Genes (coding)                    :: 1,788
            CDSs (with protein)               :: 1,788
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 60
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 18 of 54
            Pseudo Genes (incomplete)         :: 24 of 54
            Pseudo Genes (internal stop)      :: 20 of 54
            Pseudo Genes (multiple problems)  :: 7 of 54
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1851282
                     /organism="Ligilactobacillus animalis"
                     /mol_type="genomic DNA"
                     /strain="381-IL-28"
                     /isolation_source="commercial biocontrol culture"
                     /db_xref="taxon:1605"
                     /geo_loc_name="USA: College Station, TX"
                     /collection_date="2013-03-25"
WGS         JMHU01000001-JMHU01000030
WGS_SCAFLD  NZ_JMHU01000001-NZ_JMHU01000030
//
LOCUS       NZ_JBSWTR010000000   4346537 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Oceanobacter sp. ABM4_470, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWTR000000000
VERSION     NZ_JBSWTR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862032
            Assembly: GCF_056158645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Oceanobacter sp. ABM4_470
  ORGANISM  Oceanobacter sp. ABM4_470
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Oceanospirillaceae; Oceanobacter.
REFERENCE   1  (bases 1 to 4346537)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWTR000000000.1.
            The Oceanobacter sp. ABM4_470 whole genome shotgun (WGS) project
            has the project accession NZ_JBSWTR000000000.  This version of the
            project (01) has the accession number NZ_JBSWTR010000000, and
            consists of sequences JBSWTR010000001-JBSWTR010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 323x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056158645.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:07:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,812
            CDSs (total)                      :: 3,717
            Genes (coding)                    :: 3,704
            CDSs (with protein)               :: 3,704
            Genes (RNA)                       :: 95
            rRNAs                             :: 4, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 6, 4 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 73
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 7 of 13
            Pseudo Genes (incomplete)         :: 6 of 13
            Pseudo Genes (internal stop)      :: 0 of 13
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4346537
                     /organism="Oceanobacter sp. ABM4_470"
                     /mol_type="genomic DNA"
                     /strain="ABM4_470"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477706"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2024-02-16"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWTR010000001-JBSWTR010000002
WGS_SCAFLD  NZ_JBSWTR010000001-NZ_JBSWTR010000002
//
LOCUS       NZ_JBSWVX010000000   4792664 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Marinobacter xestospongiae strain ABH4_089, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSWVX000000000
VERSION     NZ_JBSWVX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861964
            Assembly: GCF_056159785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Marinobacter xestospongiae
  ORGANISM  Marinobacter xestospongiae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (bases 1 to 4792664)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWVX000000000.1.
            The Marinobacter xestospongiae whole genome shotgun (WGS) project
            has the project accession NZ_JBSWVX000000000.  This version of the
            project (01) has the accession number NZ_JBSWVX010000000, and
            consists of sequences JBSWVX010000001-JBSWVX010000005.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 526x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056159785.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:25:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,429
            CDSs (total)                      :: 4,355
            Genes (coding)                    :: 4,333
            CDSs (with protein)               :: 4,333
            Genes (RNA)                       :: 74
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 4 of 22
            Pseudo Genes (incomplete)         :: 19 of 22
            Pseudo Genes (internal stop)      :: 1 of 22
            Pseudo Genes (multiple problems)  :: 2 of 22
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4792664
                     /organism="Marinobacter xestospongiae"
                     /mol_type="genomic DNA"
                     /strain="ABH4_089"
                     /isolation_source="Marine"
                     /db_xref="taxon:994319"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWVX010000001-JBSWVX010000005
WGS_SCAFLD  NZ_JBSWVX010000001-NZ_JBSWVX010000005
//
LOCUS       NZ_JBSWVZ010000000   4795612 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Marinobacter xestospongiae strain ABH4_048, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSWVZ000000000
VERSION     NZ_JBSWVZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861962
            Assembly: GCF_056159825.1
KEYWORDS    WGS; RefSeq.
SOURCE      Marinobacter xestospongiae
  ORGANISM  Marinobacter xestospongiae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (bases 1 to 4795612)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWVZ000000000.1.
            The Marinobacter xestospongiae whole genome shotgun (WGS) project
            has the project accession NZ_JBSWVZ000000000.  This version of the
            project (01) has the accession number NZ_JBSWVZ010000000, and
            consists of sequences JBSWVZ010000001-JBSWVZ010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 702x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056159825.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:32:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,426
            CDSs (total)                      :: 4,352
            Genes (coding)                    :: 4,331
            CDSs (with protein)               :: 4,331
            Genes (RNA)                       :: 74
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 3 of 21
            Pseudo Genes (incomplete)         :: 19 of 21
            Pseudo Genes (internal stop)      :: 1 of 21
            Pseudo Genes (multiple problems)  :: 2 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4795612
                     /organism="Marinobacter xestospongiae"
                     /mol_type="genomic DNA"
                     /strain="ABH4_048"
                     /isolation_source="Marine"
                     /db_xref="taxon:994319"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWVZ010000001-JBSWVZ010000002
WGS_SCAFLD  NZ_JBSWVZ010000001-NZ_JBSWVZ010000002
//
LOCUS       NZ_RCYN01000000      2128318 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Ligilactobacillus ruminis strain bz_0080, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RCYN00000000
VERSION     NZ_RCYN00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10239553
            Assembly: GCF_004167385.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ligilactobacillus ruminis
  ORGANISM  Ligilactobacillus ruminis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Ligilactobacillus.
REFERENCE   1  (bases 1 to 2128318)
  AUTHORS   Jiang,X., Hall,A.B., Arthur,T.D., Plichta,D.R., Covington,C.T.,
            Poyet,M., Crothers,J., Moses,P.L., Tolonen,A.C., Vlamakis,H.,
            Alm,E.J. and Xavier,R.J.
  TITLE     Invertible promoters mediate bacterial phase variation, antibiotic
            resistance, and host adaptation in the gut
  JOURNAL   Science 363 (6423), 181-187 (2019)
   PUBMED   30630933
REFERENCE   2  (bases 1 to 2128318)
  AUTHORS   Jiang,X., Hall,B., Alm,E. and Xavier,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-OCT-2018) Infectious Disease and Microbiome (IDM)
            Program, Broad Institute, 415 Main St, Cambridge, MA 02142, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RCYN00000000.1.
            The Ligilactobacillus ruminis whole genome shotgun (WGS) project
            has the project accession NZ_RCYN00000000.  This version of the
            project (01) has the accession number NZ_RCYN01000000, and consists
            of sequences RCYN01000001-RCYN01000055.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 18.2188x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004167385.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:52:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,084
            CDSs (total)                      :: 2,023
            Genes (coding)                    :: 1,984
            CDSs (with protein)               :: 1,984
            Genes (RNA)                       :: 61
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 53
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 11 of 39
            Pseudo Genes (incomplete)         :: 27 of 39
            Pseudo Genes (internal stop)      :: 14 of 39
            Pseudo Genes (multiple problems)  :: 10 of 39
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2128318
                     /organism="Ligilactobacillus ruminis"
                     /mol_type="genomic DNA"
                     /strain="bz_0080"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:1623"
                     /geo_loc_name="USA: Cambridge"
                     /collection_date="2015-01"
WGS         RCYN01000001-RCYN01000055
WGS_SCAFLD  NZ_RCYN01000001-NZ_RCYN01000055
//
LOCUS       NZ_LNYY01000000      4227062 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Legionella steelei strain IMVS3376, whole genome shotgun sequencing
            project.
ACCESSION   NZ_LNYY00000000
VERSION     NZ_LNYY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04274796
            Assembly: GCF_001468005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Legionella steelei
  ORGANISM  Legionella steelei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1  (bases 1 to 4227062)
  AUTHORS   Burstein,D., Amaro,F., Zusman,T., Lifshitz,Z., Cohen,O.,
            Gilbert,J.A., Pupko,T., Shuman,H.A. and Segal,G.
  TITLE     Genomic analysis of 38 Legionella species identifies large and
            diverse effector repertoires
  JOURNAL   Nat Genet 48 (2), 167-175 (2016)
   PUBMED   26752266
REFERENCE   2  (bases 1 to 4227062)
  AUTHORS   Burstein,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2015) Cell Research and Immunology, Tel Aviv
            University, Tel Aviv 69978, Israel
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LNYY00000000.1.
            The Legionella steelei whole genome shotgun (WGS) project has the
            project accession NZ_LNYY00000000.  This version of the project
            (01) has the accession number NZ_LNYY01000000, and consists of
            sequences LNYY01000001-LNYY01000021.
            Annotated using prokka 1.11.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.2.10
            Genome Coverage       :: 474x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001468005.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:56:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,754
            CDSs (total)                      :: 3,705
            Genes (coding)                    :: 3,662
            CDSs (with protein)               :: 3,662
            Genes (RNA)                       :: 49
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 15 of 43
            Pseudo Genes (incomplete)         :: 36 of 43
            Pseudo Genes (internal stop)      :: 3 of 43
            Pseudo Genes (multiple problems)  :: 11 of 43
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4227062
                     /organism="Legionella steelei"
                     /mol_type="genomic DNA"
                     /strain="IMVS3376"
                     /isolation_source="Respiratory tract of human patient with
                     bronchitis"
                     /host="Homo sapiens"
                     /culture_collection="ATCC:BAA2169"
                     /type_material="type strain of Legionella steelei"
                     /db_xref="taxon:947033"
                     /geo_loc_name="Australia"
                     /collection_date="1999"
                     /collected_by="Edelstein P."
WGS         LNYY01000001-LNYY01000021
WGS_SCAFLD  NZ_LNYY01000001-NZ_LNYY01000021
//
LOCUS       NZ_JBBEVX010000000   2063633 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Limosilactobacillus fermentum strain MCC 0225, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBBEVX000000000
VERSION     NZ_JBBEVX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40371654
            Assembly: GCF_037407275.1
KEYWORDS    WGS; RefSeq.
SOURCE      Limosilactobacillus fermentum
  ORGANISM  Limosilactobacillus fermentum
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Limosilactobacillus.
REFERENCE   1  (bases 1 to 2063633)
  AUTHORS   Dhakephalkar,T., Pore,S.D., Kapse,N.G., Shetty,D., Pisu,V.S.,
            Wagh,S., Dagar,S. and Dhakephalkar,P.K.
  TITLE     Genomic insights into probiotic potential of Limosilactobacillus
            fermentum MCC 0225
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2063633)
  AUTHORS   Dhakephalkar,T., Pore,S.D., Kapse,N.G., Shetty,D., Pisu,V.S.,
            Wagh,S., Dagar,S. and Dhakephalkar,P.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2024) Bioenergy, Agharkar Research Institute, G.G
            Agarkar road, Pune, Maharastra 411004, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBEVX000000000.1.
            The Limosilactobacillus fermentum whole genome shotgun (WGS)
            project has the project accession NZ_JBBEVX000000000.  This version
            of the project (01) has the accession number NZ_JBBEVX010000000,
            and consists of sequences JBBEVX010000001-JBBEVX010000121.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.10
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037407275.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:44:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,189
            CDSs (total)                      :: 2,129
            Genes (coding)                    :: 2,014
            CDSs (with protein)               :: 2,014
            Genes (RNA)                       :: 60
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 115
            CDSs (without protein)            :: 115
            Pseudo Genes (ambiguous residues) :: 0 of 115
            Pseudo Genes (frameshifted)       :: 21 of 115
            Pseudo Genes (incomplete)         :: 83 of 115
            Pseudo Genes (internal stop)      :: 28 of 115
            Pseudo Genes (multiple problems)  :: 16 of 115
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2063633
                     /organism="Limosilactobacillus fermentum"
                     /mol_type="genomic DNA"
                     /strain="MCC 0225"
                     /isolation_source="Human source"
                     /db_xref="taxon:1613"
                     /geo_loc_name="India: Maharashtra"
                     /collection_date="2013-01"
WGS         JBBEVX010000001-JBBEVX010000121
WGS_SCAFLD  NZ_JBBEVX010000001-NZ_JBBEVX010000121
//
LOCUS       NZ_JBSWXR010000000   4822650 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Marisediminitalea aggregata strain ABF4_491, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSWXR000000000
VERSION     NZ_JBSWXR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861915
            Assembly: GCF_056160705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Marisediminitalea aggregata
  ORGANISM  Marisediminitalea aggregata
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Alteromonadaceae; Marisediminitalea.
REFERENCE   1  (bases 1 to 4822650)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWXR000000000.1.
            The Marisediminitalea aggregata whole genome shotgun (WGS) project
            has the project accession NZ_JBSWXR000000000.  This version of the
            project (01) has the accession number NZ_JBSWXR010000000, and
            consists of sequences JBSWXR010000001-JBSWXR010000088.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 336x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056160705.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:50:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,360
            CDSs (total)                      :: 4,294
            Genes (coding)                    :: 4,260
            CDSs (with protein)               :: 4,260
            Genes (RNA)                       :: 66
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 6 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 7 of 34
            Pseudo Genes (multiple problems)  :: 2 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4822650
                     /organism="Marisediminitalea aggregata"
                     /mol_type="genomic DNA"
                     /strain="ABF4_491"
                     /isolation_source="Marine"
                     /db_xref="taxon:634436"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2024-02-16"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWXR010000001-JBSWXR010000088
WGS_SCAFLD  NZ_JBSWXR010000001-NZ_JBSWXR010000088
//
LOCUS       NZ_NDYW01000000      2025598 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Ligilactobacillus salivarius strain L28, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NDYW00000000
VERSION     NZ_NDYW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06763640
            Assembly: GCF_002250405.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ligilactobacillus salivarius
  ORGANISM  Ligilactobacillus salivarius
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Ligilactobacillus.
REFERENCE   1  (bases 1 to 2025598)
  AUTHORS   Ayala,D.I., Cook,P.W., Campos,D.L., Brashears,M.M., den Bakker,H.
            and Nightingale,K.K.
  TITLE     Draft Genome Sequence of Lactobacillus salivarius L28 Isolated from
            Ground Beef
  JOURNAL   Genome Announc 5 (39), e00955-17 (2017)
   PUBMED   28963206
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2025598)
  AUTHORS   Cook,P.W., Ayala,D.I., Campos,D.L., Den Bakker,H.C., Nightingale,K.
            and Brashears,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-APR-2017) Animal and Food Science, Texas Tech
            University, Texas Tech Uni. Experimental Sciences RM352, Lubbock,
            TX 79409, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NDYW00000000.1.
            The Ligilactobacillus salivarius whole genome shotgun (WGS) project
            has the project accession NZ_NDYW00000000.  This version of the
            project (01) has the accession number NZ_NDYW01000000, and consists
            of sequences NDYW01000001-NDYW01000077.
            Bacteria and source DNA available from Mindy Brashears.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 23-JUN-2016
            Assembly Method        :: SPAdes v. 2016-06-23
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 118.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002250405.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:51:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,083
            CDSs (total)                      :: 1,984
            Genes (coding)                    :: 1,946
            CDSs (with protein)               :: 1,946
            Genes (RNA)                       :: 99
            rRNAs                             :: 5, 11, 14 (5S, 16S, 23S)
            complete rRNAs                    :: 5 (5S)
            partial rRNAs                     :: 11, 14 (16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 38
            CDSs (without protein)            :: 38
            Pseudo Genes (ambiguous residues) :: 0 of 38
            Pseudo Genes (frameshifted)       :: 4 of 38
            Pseudo Genes (incomplete)         :: 30 of 38
            Pseudo Genes (internal stop)      :: 6 of 38
            Pseudo Genes (multiple problems)  :: 2 of 38
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2025598
                     /organism="Ligilactobacillus salivarius"
                     /mol_type="genomic DNA"
                     /strain="L28"
                     /isolation_source="Ground Beef"
                     /db_xref="taxon:1624"
                     /geo_loc_name="USA"
                     /collection_date="2013"
WGS         NDYW01000001-NDYW01000077
WGS_SCAFLD  NZ_NDYW01000001-NZ_NDYW01000077
//
LOCUS       NZ_JBSWXK010000000   3778469 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Neptunomonas sp. ABH4_499, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWXK000000000
VERSION     NZ_JBSWXK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861922
            Assembly: GCF_056160565.1
KEYWORDS    WGS; RefSeq.
SOURCE      Neptunomonas sp. ABH4_499
  ORGANISM  Neptunomonas sp. ABH4_499
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Oceanospirillaceae; Neptunomonas.
REFERENCE   1  (bases 1 to 3778469)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWXK000000000.1.
            The Neptunomonas sp. ABH4_499 whole genome shotgun (WGS) project
            has the project accession NZ_JBSWXK000000000.  This version of the
            project (01) has the accession number NZ_JBSWXK010000000, and
            consists of sequences JBSWXK010000001-JBSWXK010000069.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 402x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056160565.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:40:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,652
            CDSs (total)                      :: 3,578
            Genes (coding)                    :: 3,542
            CDSs (with protein)               :: 3,542
            Genes (RNA)                       :: 74
            rRNAs                             :: 5, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 2 (5S, 16S)
            tRNAs                             :: 61
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 8 of 36
            Pseudo Genes (incomplete)         :: 25 of 36
            Pseudo Genes (internal stop)      :: 7 of 36
            Pseudo Genes (multiple problems)  :: 3 of 36
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3778469
                     /organism="Neptunomonas sp. ABH4_499"
                     /mol_type="genomic DNA"
                     /strain="ABH4_499"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477756"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2024-02-16"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWXK010000001-JBSWXK010000069
WGS_SCAFLD  NZ_JBSWXK010000001-NZ_JBSWXK010000069
//
LOCUS       NZ_QAZG01000000      1995890 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Ligilactobacillus salivarius strain DS13_12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QAZG00000000
VERSION     NZ_QAZG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05942024
            Assembly: GCF_003052875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ligilactobacillus salivarius
  ORGANISM  Ligilactobacillus salivarius
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Ligilactobacillus.
REFERENCE   1  (bases 1 to 1995890)
  AUTHORS   Gangiredla,J., Barnaba,T.J., Mammel,M.K., Lacher,D.W., Elkins,C.A.,
            Lampel,K.A., Whitehouse,C.A. and Tartera,C.
  TITLE     Fifty-Six Draft Genome Sequences of 10 Lactobacillus Species from
            22 Commercial Dietary Supplements
  JOURNAL   Genome Announc 6 (26), e00621-18 (2018)
   PUBMED   29954914
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1995890)
  AUTHORS   Gangiredla,J., Barnaba,T.J., Mammel,M.K., Lacher,D.W., Elkins,C.A.,
            Lampel,K.A., Whitehouse,C.A. and Tartera,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2018) Department of Molecular Biology, USFDA,
            8301 Muirkirk Road, Laurel, MD 20708, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QAZG00000000.1.
            The Ligilactobacillus salivarius whole genome shotgun (WGS) project
            has the project accession NZ_QAZG00000000.  This version of the
            project (01) has the accession number NZ_QAZG01000000, and consists
            of sequences QAZG01000001-QAZG01000050.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 224.8x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003052875.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:53:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,991
            CDSs (total)                      :: 1,921
            Genes (coding)                    :: 1,894
            CDSs (with protein)               :: 1,894
            Genes (RNA)                       :: 70
            rRNAs                             :: 4, 3, 2 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 3, 2 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 27
            CDSs (without protein)            :: 27
            Pseudo Genes (ambiguous residues) :: 0 of 27
            Pseudo Genes (frameshifted)       :: 7 of 27
            Pseudo Genes (incomplete)         :: 17 of 27
            Pseudo Genes (internal stop)      :: 6 of 27
            Pseudo Genes (multiple problems)  :: 3 of 27
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1995890
                     /organism="Ligilactobacillus salivarius"
                     /mol_type="genomic DNA"
                     /strain="DS13_12"
                     /isolation_source="Commercial dietary supplements"
                     /host="Homo sapiens"
                     /db_xref="taxon:1624"
                     /geo_loc_name="USA: MD"
                     /collection_date="2016-05-07"
WGS         QAZG01000001-QAZG01000050
WGS_SCAFLD  NZ_QAZG01000001-NZ_QAZG01000050
//
LOCUS       NZ_LNYW01000000      3495892 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Legionella shakespearei DSM 23087 strain ATCC 49655, whole genome
            shotgun sequencing project.
ACCESSION   NZ_LNYW00000000
VERSION     NZ_LNYW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04274794
            Assembly: GCF_001468025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Legionella shakespearei DSM 23087
  ORGANISM  Legionella shakespearei DSM 23087
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Legionellales; Legionellaceae; Legionella.
REFERENCE   1  (bases 1 to 3495892)
  AUTHORS   Burstein,D., Amaro,F., Zusman,T., Lifshitz,Z., Cohen,O.,
            Gilbert,J.A., Pupko,T., Shuman,H.A. and Segal,G.
  TITLE     Genomic analysis of 38 Legionella species identifies large and
            diverse effector repertoires
  JOURNAL   Nat Genet 48 (2), 167-175 (2016)
   PUBMED   26752266
REFERENCE   2  (bases 1 to 3495892)
  AUTHORS   Burstein,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2015) Cell Research and Immunology, Tel Aviv
            University, Tel Aviv 69978, Israel
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LNYW00000000.1.
            The Legionella shakespearei DSM 23087 whole genome shotgun (WGS)
            project has the project accession NZ_LNYW00000000.  This version of
            the project (01) has the accession number NZ_LNYW01000000, and
            consists of sequences LNYW01000001-LNYW01000076.
            Annotated using prokka 1.11.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.2.10
            Genome Coverage       :: 828x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001468025.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:49:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,978
            CDSs (total)                      :: 2,929
            Genes (coding)                    :: 2,909
            CDSs (with protein)               :: 2,909
            Genes (RNA)                       :: 49
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 2 of 20
            Pseudo Genes (incomplete)         :: 18 of 20
            Pseudo Genes (internal stop)      :: 1 of 20
            Pseudo Genes (multiple problems)  :: 1 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3495892
                     /organism="Legionella shakespearei DSM 23087"
                     /mol_type="genomic DNA"
                     /strain="ATCC 49655"
                     /isolation_source="Cooling tower water"
                     /culture_collection="ATCC:49655"
                     /type_material="type strain of Legionella shakespearei"
                     /db_xref="taxon:1122169"
                     /geo_loc_name="United Kingdom: Stratford-upon-Avon"
                     /collected_by="Thacker W. L."
WGS         LNYW01000001-LNYW01000076
WGS_SCAFLD  NZ_LNYW01000001-NZ_LNYW01000076
//
LOCUS       NZ_CBDBYH010000000   2617524 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Levilactobacillus brevis isolate Lactobacillus brevis VK-A, whole
            genome shotgun sequencing project.
ACCESSION   NZ_CBDBYH000000000
VERSION     NZ_CBDBYH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117819814
            Assembly: GCF_965213345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Levilactobacillus brevis
  ORGANISM  Levilactobacillus brevis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Levilactobacillus.
REFERENCE   1  (bases 1 to 2617524)
  AUTHORS   Kisand,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAR-2025) University of Tartu, Institute of
            Technology, Environmental Microbiology, Nooruse 1, 50411, Estonia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBDBYH000000000.1.
            The Levilactobacillus brevis whole genome shotgun (WGS) project has
            the project accession NZ_CBDBYH000000000.  This version of the
            project (01) has the accession number NZ_CBDBYH010000000, and
            consists of sequences CBDBYH010000001-CBDBYH010000018.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_965213345.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:34:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,654
            CDSs (total)                      :: 2,571
            Genes (coding)                    :: 2,506
            CDSs (with protein)               :: 2,506
            Genes (RNA)                       :: 83
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 18 of 65
            Pseudo Genes (incomplete)         :: 44 of 65
            Pseudo Genes (internal stop)      :: 13 of 65
            Pseudo Genes (multiple problems)  :: 9 of 65
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2617524
                     /organism="Levilactobacillus brevis"
                     /mol_type="genomic DNA"
                     /isolate="Lactobacillus brevis VK-A"
                     /db_xref="taxon:1580"
                     /geo_loc_name="Estonia"
                     /collection_date="2018"
WGS         CBDBYH010000001-CBDBYH010000018
WGS_SCAFLD  NZ_CBDBYH010000001-NZ_CBDBYH010000018
//
LOCUS       NZ_JBSWYU010000000   3681688 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Marinomonas sp. ABL3_031, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWYU000000000
VERSION     NZ_JBSWYU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861885
            Assembly: GCF_056161265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Marinomonas sp. ABL3_031
  ORGANISM  Marinomonas sp. ABL3_031
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Oceanospirillaceae; Marinomonas.
REFERENCE   1  (bases 1 to 3681688)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWYU000000000.1.
            The Marinomonas sp. ABL3_031 whole genome shotgun (WGS) project has
            the project accession NZ_JBSWYU000000000.  This version of the
            project (01) has the accession number NZ_JBSWYU010000000, and
            consists of sequences JBSWYU010000001-JBSWYU010000064.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 259x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161265.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:50:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,449
            CDSs (total)                      :: 3,361
            Genes (coding)                    :: 3,339
            CDSs (with protein)               :: 3,339
            Genes (RNA)                       :: 88
            rRNAs                             :: 5, 5, 10 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 3, 5, 10 (5S, 16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 5 of 22
            Pseudo Genes (incomplete)         :: 16 of 22
            Pseudo Genes (internal stop)      :: 4 of 22
            Pseudo Genes (multiple problems)  :: 3 of 22
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3681688
                     /organism="Marinomonas sp. ABL3_031"
                     /mol_type="genomic DNA"
                     /strain="ABL3_031"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477779"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-07-26"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWYU010000001-JBSWYU010000064
WGS_SCAFLD  NZ_JBSWYU010000001-NZ_JBSWYU010000064
//
LOCUS       NZ_JBITBS010000000   3117203 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Lentilactobacillus diolivorans strain IMAU13829, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JBITBS000000000
VERSION     NZ_JBITBS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44499830
            Assembly: GCF_056171835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lentilactobacillus diolivorans
  ORGANISM  Lentilactobacillus diolivorans
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lentilactobacillus.
REFERENCE   1  (bases 1 to 3117203)
  AUTHORS   Liu,W. and Wei,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2024) Inner Mongolia Agricultural University, Key
            Laboratory of Dairy Biotechnology and Engineering, 306 Zhaowuda
            Road, Hohhot, Inner Mongolia Autonomous Region 010018, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBITBS000000000.1.
            The Lentilactobacillus diolivorans whole genome shotgun (WGS)
            project has the project accession NZ_JBITBS000000000.  This version
            of the project (01) has the accession number NZ_JBITBS010000000,
            and consists of sequences JBITBS010000001-JBITBS010000270.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Wenjun Liu.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056171835.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:49:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,135
            CDSs (total)                      :: 3,066
            Genes (coding)                    :: 2,926
            CDSs (with protein)               :: 2,926
            Genes (RNA)                       :: 69
            rRNAs                             :: 3, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 3, 3 (5S, 16S)
            tRNAs                             :: 59
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 140
            CDSs (without protein)            :: 140
            Pseudo Genes (ambiguous residues) :: 0 of 140
            Pseudo Genes (frameshifted)       :: 32 of 140
            Pseudo Genes (incomplete)         :: 105 of 140
            Pseudo Genes (internal stop)      :: 13 of 140
            Pseudo Genes (multiple problems)  :: 10 of 140
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3117203
                     /organism="Lentilactobacillus diolivorans"
                     /mol_type="genomic DNA"
                     /strain="IMAU13829"
                     /isolation_source="Koumiss"
                     /db_xref="taxon:179838"
                     /geo_loc_name="Kyrgyzstan"
                     /collection_date="2019"
                     /collected_by="Key Laboratory of Dairy Biotechnology and
                     engineering"
WGS         JBITBS010000001-JBITBS010000270
WGS_SCAFLD  NZ_JBITBS010000001-NZ_JBITBS010000270
//
LOCUS       NZ_JBSWYD010000000   4672435 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Nitratireductor aquimarinus strain ABA4_165, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSWYD000000000
VERSION     NZ_JBSWYD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861902
            Assembly: GCF_056160925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Nitratireductor aquimarinus
  ORGANISM  Nitratireductor aquimarinus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Nitratireductor.
REFERENCE   1  (bases 1 to 4672435)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWYD000000000.1.
            The Nitratireductor aquimarinus whole genome shotgun (WGS) project
            has the project accession NZ_JBSWYD000000000.  This version of the
            project (01) has the accession number NZ_JBSWYD010000000, and
            consists of sequences JBSWYD010000001-JBSWYD010000046.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 225x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056160925.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:52:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,458
            CDSs (total)                      :: 4,403
            Genes (coding)                    :: 4,364
            CDSs (with protein)               :: 4,364
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 9 of 39
            Pseudo Genes (incomplete)         :: 31 of 39
            Pseudo Genes (internal stop)      :: 3 of 39
            Pseudo Genes (multiple problems)  :: 4 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4672435
                     /organism="Nitratireductor aquimarinus"
                     /mol_type="genomic DNA"
                     /strain="ABA4_165"
                     /isolation_source="Marine"
                     /db_xref="taxon:889300"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWYD010000001-JBSWYD010000046
WGS_SCAFLD  NZ_JBSWYD010000001-NZ_JBSWYD010000046
//
LOCUS       NZ_JBSWXX010000000   3186900 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Maricaulis sp. ABE4_448, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWXX000000000
VERSION     NZ_JBSWXX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861908
            Assembly: GCF_056160825.1
KEYWORDS    WGS; RefSeq.
SOURCE      Maricaulis sp. ABE4_448
  ORGANISM  Maricaulis sp. ABE4_448
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Maricaulales; Maricaulaceae; Maricaulis.
REFERENCE   1  (bases 1 to 3186900)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWXX000000000.1.
            The Maricaulis sp. ABE4_448 whole genome shotgun (WGS) project has
            the project accession NZ_JBSWXX000000000.  This version of the
            project (01) has the accession number NZ_JBSWXX010000000, and
            consists of sequences JBSWXX010000001-JBSWXX010000013.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 321x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056160825.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:34:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,068
            CDSs (total)                      :: 3,018
            Genes (coding)                    :: 3,006
            CDSs (with protein)               :: 3,006
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 4 of 12
            Pseudo Genes (incomplete)         :: 9 of 12
            Pseudo Genes (internal stop)      :: 1 of 12
            Pseudo Genes (multiple problems)  :: 2 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3186900
                     /organism="Maricaulis sp. ABE4_448"
                     /mol_type="genomic DNA"
                     /strain="ABE4_448"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477766"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWXX010000001-JBSWXX010000013
WGS_SCAFLD  NZ_JBSWXX010000001-NZ_JBSWXX010000013
//
LOCUS       NZ_LDPB01000000      2082789 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Limosilactobacillus panis DSM 6035, whole genome shotgun sequencing
            project.
ACCESSION   NZ_LDPB00000000
VERSION     NZ_LDPB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03658566
            Assembly: GCF_001027985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Limosilactobacillus panis DSM 6035
  ORGANISM  Limosilactobacillus panis DSM 6035
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Limosilactobacillus.
REFERENCE   1  (bases 1 to 2082789)
  AUTHORS   Zhu,Y., Fang,D., Shi,D., Li,A., Lv,L., Yan,R., Yao,J., Hua,D.,
            Hu,X., Guo,F., Wu,W., Guo,J., Chen,Y., Jiang,X., Chen,X. and Li,L.
  TITLE     Draft Genome Sequence of Lactobacillus panis DSM 6035T, First
            Isolated from Sourdough
  JOURNAL   Genome Announc 3 (4), e00778-15 (2015)
   PUBMED   26205855
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2082789)
  AUTHORS   Fang,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-MAY-2015) The First Affiliated Hospital, College of
            Medicine, Zhejiang University, 79 Qingchun Road, Hangzhou, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LDPB00000000.1.
            The Limosilactobacillus panis DSM 6035 whole genome shotgun (WGS)
            project has the project accession NZ_LDPB00000000.  This version of
            the project (01) has the accession number NZ_LDPB01000000, and
            consists of sequences LDPB01000001-LDPB01000219.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 1.2.07
            Genome Coverage       :: 1366.0x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001027985.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:36:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,174
            CDSs (total)                      :: 2,082
            Genes (coding)                    :: 1,947
            CDSs (with protein)               :: 1,947
            Genes (RNA)                       :: 92
            rRNAs                             :: 4, 11, 15 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 11, 15 (16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 135
            CDSs (without protein)            :: 135
            Pseudo Genes (ambiguous residues) :: 0 of 135
            Pseudo Genes (frameshifted)       :: 37 of 135
            Pseudo Genes (incomplete)         :: 93 of 135
            Pseudo Genes (internal stop)      :: 19 of 135
            Pseudo Genes (multiple problems)  :: 12 of 135
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2082789
                     /organism="Limosilactobacillus panis DSM 6035"
                     /mol_type="genomic DNA"
                     /strain="DSM 6035"
                     /isolation_source="sourdough"
                     /culture_collection="DSM:6035"
                     /type_material="type strain of Lactobacillus panis"
                     /db_xref="taxon:1423782"
                     /geo_loc_name="Germany"
                     /collection_date="1996"
WGS         LDPB01000001-LDPB01000219
WGS_SCAFLD  NZ_LDPB01000001-NZ_LDPB01000219
//
LOCUS       NZ_CAVG010000000     1509734 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Nosocomiicoccus massiliensis strain NP2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CAVG000000000
VERSION     NZ_CAVG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA2272510
            Assembly: GCF_000438455.1
KEYWORDS    WGS; RefSeq.
SOURCE      Nosocomiicoccus massiliensis
  ORGANISM  Nosocomiicoccus massiliensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Nosocomiicoccus.
REFERENCE   1
  AUTHORS   Mishra,A.K.
  TITLE     Nosocomiicoccus massiliensis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1509734)
  AUTHORS   Mishra,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2013) UMR CNRS 6236, Faculty of medicine,
            Aix-Marseille University, 27 Boulevard Jean Moulin, 13385 Marseille
            cedex 05, FRANCE
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAVG000000000.1.
            The Nosocomiicoccus massiliensis whole genome shotgun (WGS) project
            has the project accession NZ_CAVG000000000.  This version of the
            project (01) has the accession number NZ_CAVG010000000, and
            consists of sequences CAVG010000001-CAVG010000154.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000438455.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:48:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,657
            CDSs (total)                      :: 1,610
            Genes (coding)                    :: 1,573
            CDSs (with protein)               :: 1,573
            Genes (RNA)                       :: 47
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 42
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 17 of 37
            Pseudo Genes (incomplete)         :: 16 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 1 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1509734
                     /organism="Nosocomiicoccus massiliensis"
                     /mol_type="genomic DNA"
                     /strain="NP2"
                     /type_material="type strain of Nosocomiicoccus
                     massiliensis"
                     /db_xref="taxon:1232430"
WGS         CAVG010000001-CAVG010000154
WGS_SCAFLD  NZ_CAVG010000001-NZ_CAVG010000154
//
LOCUS       NZ_CDVMBU010000000   4567559 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Marinobacter adhaerens isolate MarMAG_116170, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVMBU000000000
VERSION     NZ_CDVMBU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120738477
            Assembly: GCF_977715025.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Marinobacter adhaerens (marine metagenome)
  ORGANISM  Marinobacter adhaerens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (bases 1 to 4567559)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVMBU000000000.1.
            The Marinobacter adhaerens whole genome shotgun (WGS) project has
            the project accession NZ_CDVMBU000000000.  This version of the
            project (01) has the accession number NZ_CDVMBU010000000, and
            consists of sequences CDVMBU010000001-CDVMBU010000018.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977715025.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:45:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,261
            CDSs (total)                      :: 4,210
            Genes (coding)                    :: 4,190
            CDSs (with protein)               :: 4,190
            Genes (RNA)                       :: 51
            tRNAs                             :: 46
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 4 of 20
            Pseudo Genes (incomplete)         :: 18 of 20
            Pseudo Genes (internal stop)      :: 1 of 20
            Pseudo Genes (multiple problems)  :: 3 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4567559
                     /organism="Marinobacter adhaerens"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_116170"
                     /isolation_source="surface seawater"
                     /db_xref="taxon:1033846"
                     /environmental_sample
                     /geo_loc_name="Costa Rica"
                     /collection_date="2005-07-01"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVMBU010000001-CDVMBU010000018
WGS_SCAFLD  NZ_CDVMBU010000001-NZ_CDVMBU010000018
//
LOCUS       NZ_ADWM02000000      2082596 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Neisseria meningitidis K1207, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ADWM00000000
VERSION     NZ_ADWM00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00014633
            Assembly: GCF_000144995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Neisseria meningitidis K1207
  ORGANISM  Neisseria meningitidis K1207
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2082596)
  AUTHORS   Lavezzo,E., Toppo,S., Barzon,L., Cobelli,C., Di Camillo,B.,
            Finotello,F., Franchin,E., Peruzzo,D., Toffolo,G.M., Trevisan,M.
            and Palu,G.
  TITLE     Draft genome sequences of two Neisseria meningitidis serogroup C
            clinical isolates
  JOURNAL   J Bacteriol 192 (19), 5270-5271 (2010)
   PUBMED   20675487
REFERENCE   2  (bases 1 to 2082596)
  AUTHORS   Lavezzo,E., Toppo,S., Franchin,E., Di Camillo,B., Finotello,F.,
            Peruzzo,D., Manganelli,R., Palu,G. and Barzon,L.
  TITLE     Whole genome sequencing to investigate a cluster of serogroup C
            meningococcal disease
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 2082596)
  AUTHORS   Lavezzo,E., Toppo,S., Barzon,L., Cobelli,C., Di Camillo,B.,
            Finotello,F., Franchin,E., Peruzzo,D., Toffolo,G.M., Trevisan,M.
            and Palu,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2012) Department of Molecular Medicine,
            University of Padua, Via Gabelli 63, Padua, PD 32128, Italy
REFERENCE   4  (bases 1 to 2082596)
  AUTHORS   Lavezzo,E., Palu,G., Toppo,S., Franchin,E., Trevisan,M., Barzon,L.,
            Peruzzo,D., Di Camillo,B., Toffolo,G.M. and Cobelli,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-JUN-2010) Histology, Microbiology and Medical
            Biotechnologies, University of Padua, via Gabelli 63, Padua, PD
            35131, Italy
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADWM00000000.2.
            The Neisseria meningitidis K1207 whole genome shotgun (WGS) project
            has the project accession NZ_ADWM00000000.  This version of the
            project (02) has the accession number NZ_ADWM02000000, and consists
            of sequences ADWM02000001-ADWM02000138.
            Neisseria meningitidis K1207 and Neisseria meningitidis S0108 (WGS
            projects ADWM00000000 and ADWN00000000, respectively) were isolated
            from the same outbreak.
            Source DNA available from Azienda Ospedaliera di Padova, Unit
            Operativa di Microbiologia, Via Giustiniani 2, 35128, Padova,
            Italy.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Newbler v. 2.6
            Assembly Name         :: K1207_nm2.0
            Genome Coverage       :: 27.0x
            Sequencing Technology :: 454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000144995.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:53:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,160
            CDSs (total)                      :: 2,100
            Genes (coding)                    :: 1,940
            CDSs (with protein)               :: 1,940
            Genes (RNA)                       :: 60
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 160
            CDSs (without protein)            :: 160
            Pseudo Genes (ambiguous residues) :: 0 of 160
            Pseudo Genes (frameshifted)       :: 49 of 160
            Pseudo Genes (incomplete)         :: 120 of 160
            Pseudo Genes (internal stop)      :: 18 of 160
            Pseudo Genes (multiple problems)  :: 24 of 160
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2082596
                     /organism="Neisseria meningitidis K1207"
                     /mol_type="genomic DNA"
                     /strain="K1207"
                     /isolate="K1207"
                     /host="Homo sapiens"
                     /db_xref="taxon:768485"
                     /geo_loc_name="Italy: Veneto Region"
                     /collection_date="2007-12"
                     /serogroup="C"
WGS         ADWM02000001-ADWM02000138
WGS_SCAFLD  NZ_ADWM02000110-NZ_ADWM02000137
WGS_SCAFLD  NZ_CM000956
WGS_SCAFLD  NZ_KE007332-NZ_KE007343
//
LOCUS       NZ_ADWN02000000      2086882 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Neisseria meningitidis S0108, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ADWN00000000
VERSION     NZ_ADWN00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00014634
            Assembly: GCF_000145015.1
KEYWORDS    WGS; RefSeq.
SOURCE      Neisseria meningitidis S0108
  ORGANISM  Neisseria meningitidis S0108
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2086882)
  AUTHORS   Lavezzo,E., Toppo,S., Barzon,L., Cobelli,C., Di Camillo,B.,
            Finotello,F., Franchin,E., Peruzzo,D., Toffolo,G.M., Trevisan,M.
            and Palu,G.
  TITLE     Draft genome sequences of two Neisseria meningitidis serogroup C
            clinical isolates
  JOURNAL   J Bacteriol 192 (19), 5270-5271 (2010)
   PUBMED   20675487
REFERENCE   2  (bases 1 to 2086882)
  AUTHORS   Lavezzo,E., Toppo,S., Franchin,E., Di Camillo,B., Finotello,F.,
            Peruzzo,D., Manganelli,R., Palu,G. and Barzon,L.
  TITLE     Whole genome sequencing to investigate a cluster of serogroup C
            meningococcal disease
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 2086882)
  AUTHORS   Lavezzo,E., Toppo,S., Barzon,L., Cobelli,C., Di Camillo,B.,
            Finotello,F., Franchin,E., Peruzzo,D., Toffolo,G.M., Trevisan,M.
            and Palu,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-AUG-2012) Department of Molecular Medicine,
            University of Padua, via Gabelli 63, Padua, PD 32128, Italy
REFERENCE   4  (bases 1 to 2086882)
  AUTHORS   Lavezzo,E., Palu,G., Toppo,S., Franchin,E., Trevisan,M., Barzon,L.,
            Peruzzo,D., Di Camillo,B., Toffolo,G.M. and Cobelli,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-JUN-2010) Histology, Microbiology and Medical
            Biotechnologies, University of Padua, via Gabelli 63, Padua, PD
            35131, Italy
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADWN00000000.2.
            The Neisseria meningitidis S0108 whole genome shotgun (WGS) project
            has the project accession NZ_ADWN00000000.  This version of the
            project (02) has the accession number NZ_ADWN02000000, and consists
            of sequences ADWN02000001-ADWN02000127.
            Neisseria meningitidis K1207 and Neisseria meningitidis S0108 (WGS
            projects ADWM00000000 and ADWN00000000, respectively) were isolated
            from the same outbreak.
            Plasmid sequence is identical to the sequence for plasmid pJS-B
            deposited in NC_004758.
            Source DNA available from Azienda Ospedaliera di Padova, Unit
            Operativa di Microbiologia. Via Giustiniani 2, 35128, Padova,
            Italy.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Newbler v. 2.6
            Assembly Name         :: S0108_nm2.0
            Genome Coverage       :: 27.0x
            Sequencing Technology :: 454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000145015.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:56:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,139
            CDSs (total)                      :: 2,079
            Genes (coding)                    :: 1,926
            CDSs (with protein)               :: 1,926
            Genes (RNA)                       :: 60
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 153
            CDSs (without protein)            :: 153
            Pseudo Genes (ambiguous residues) :: 0 of 153
            Pseudo Genes (frameshifted)       :: 44 of 153
            Pseudo Genes (incomplete)         :: 113 of 153
            Pseudo Genes (internal stop)      :: 17 of 153
            Pseudo Genes (multiple problems)  :: 19 of 153
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2086882
                     /organism="Neisseria meningitidis S0108"
                     /mol_type="genomic DNA"
                     /strain="S0108"
                     /host="Homo sapiens"
                     /db_xref="taxon:768484"
                     /geo_loc_name="Italy: Veneto Region"
                     /collection_date="2009-01"
                     /serogroup="C"
WGS         ADWN02000001-ADWN02000127
WGS_SCAFLD  NZ_ADWN02000094
WGS_SCAFLD  NZ_ADWN02000099
WGS_SCAFLD  NZ_ADWN02000105-NZ_ADWN02000127
WGS_SCAFLD  NZ_CM000958
WGS_SCAFLD  NZ_KB467809-NZ_KB467823
//
LOCUS       NZ_JBSWUI010000000   4226793 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Microbulbifer sp. ABF4_148, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWUI000000000
VERSION     NZ_JBSWUI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862012
            Assembly: GCF_056158985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Microbulbifer sp. ABF4_148
  ORGANISM  Microbulbifer sp. ABF4_148
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Cellvibrionales; Microbulbiferaceae; Microbulbifer.
REFERENCE   1  (bases 1 to 4226793)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWUI000000000.1.
            The Microbulbifer sp. ABF4_148 whole genome shotgun (WGS) project
            has the project accession NZ_JBSWUI000000000.  This version of the
            project (01) has the accession number NZ_JBSWUI010000000, and
            consists of sequences JBSWUI010000001-JBSWUI010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 882x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056158985.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:00:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,708
            CDSs (total)                      :: 3,624
            Genes (coding)                    :: 3,608
            CDSs (with protein)               :: 3,608
            Genes (RNA)                       :: 84
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 5 of 16
            Pseudo Genes (incomplete)         :: 11 of 16
            Pseudo Genes (internal stop)      :: 1 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4226793
                     /organism="Microbulbifer sp. ABF4_148"
                     /mol_type="genomic DNA"
                     /strain="ABF4_148"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477716"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWUI010000001-JBSWUI010000004
WGS_SCAFLD  NZ_JBSWUI010000001-NZ_JBSWUI010000004
//
LOCUS       NZ_CDVKGV010000000   4672406 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Marinobacter salarius isolate MarMAG_096366, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVKGV000000000
VERSION     NZ_CDVKGV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120738454
            Assembly: GCF_977702795.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Marinobacter salarius (marine metagenome)
  ORGANISM  Marinobacter salarius
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (bases 1 to 4672406)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVKGV000000000.1.
            The Marinobacter salarius whole genome shotgun (WGS) project has
            the project accession NZ_CDVKGV000000000.  This version of the
            project (01) has the accession number NZ_CDVKGV010000000, and
            consists of sequences CDVKGV010000001-CDVKGV010000075.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977702795.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:45:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,328
            CDSs (total)                      :: 4,283
            Genes (coding)                    :: 4,246
            CDSs (with protein)               :: 4,246
            Genes (RNA)                       :: 45
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 8 of 37
            Pseudo Genes (incomplete)         :: 30 of 37
            Pseudo Genes (internal stop)      :: 6 of 37
            Pseudo Genes (multiple problems)  :: 6 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4672406
                     /organism="Marinobacter salarius"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_096366"
                     /isolation_source="surface seawater"
                     /db_xref="taxon:1420917"
                     /environmental_sample
                     /geo_loc_name="Costa Rica"
                     /collection_date="2005-07-01"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVKGV010000001-CDVKGV010000075
WGS_SCAFLD  NZ_CDVKGV010000001-NZ_CDVKGV010000075
//
LOCUS       NZ_ATWJ01000000      3852644 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Ornithinimicrobium pekingense DSM 21552, whole genome shotgun
            sequencing project.
ACCESSION   NZ_ATWJ00000000
VERSION     NZ_ATWJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02441240
            Assembly: GCF_000421185.1
KEYWORDS    WGS; IMPROVED_HIGH_QUALITY_DRAFT; RefSeq.
SOURCE      Ornithinimicrobium pekingense DSM 21552
  ORGANISM  Ornithinimicrobium pekingense DSM 21552
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (bases 1 to 3852644)
  AUTHORS   Kyrpides,N., Huntemann,M., Han,J., Chen,A., Mavromatis,K.,
            Markowitz,V., Palaniappan,K., Ivanova,N., Schaumberg,A., Pati,A.,
            Liolios,K., Nordberg,H.P., Cantor,M.N., Hua,S.X. and Woyke,T.
  CONSRTM   DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JUL-2013) DOE Joint Genome Institute, 2800 Mitchell
            Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ATWJ00000000.1.
            The Ornithinimicrobium pekingense DSM 21552 whole genome shotgun
            (WGS) project has the project accession NZ_ATWJ00000000.  This
            version of the project (01) has the accession number
            NZ_ATWJ01000000, and consists of sequences
            ATWJ01000001-ATWJ01000015.
            URL -- http://www.jgi.doe.gov
            JGI Project ID: 1013915
            Source DNA and organism available from Hans-Peter Klenk at the
            German Collection of Microorganisms and Cell Cultures (DSMZ)
            (hans-peter.klenk@dsmz.de)
            Contacts: Nikos   Kyrpides (nckyrpides@lbl.gov)
                      Tanja Woyke (microbe@cuba.jgi-psf.org)
            Whole genome sequencing and draft assembly at JGI
            Annotation by JGI
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376)
            Full annotations are available from IMG.
            
            ##MIGS-Data-START##
            country             :: China
            environment         :: Sludge; Wastewater
            investigation_type  :: bacteria_archaea
            isol_growth_condt   :: 18175694
            lat_lon             :: 39.92 116.40
            project_name        :: Ornithinimicrobium pekingense DSM 21552
            sequencing_meth     :: WGS
            ref_biomaterial     :: DSM 21552
            rel_to_oxygen       :: Aerobe
            finishing_strategy  :: Level 1: Standard Draft
            trophic_level       :: Heterotroph
            GOLD Stamp ID       :: Gi11725
            Type Strain         :: Yes
            Funding Program     :: DOE-CSP 2012
            Isolation Site      :: Activated sludge of a bioreactor treating
                                   wastewater
            Cell Shape          :: Rod-shaped
            Motility            :: Nonmotile
            Temperature Range   :: Mesophile
            Temperature Optimum :: 33-37 C
            pH                  :: 6-9
            Gram Staining       :: Gram+
            Phenotypes          :: Catalase positive
            ##MIGS-Data-END##
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: Improved High-Quality Draft
            Current Finishing Status :: Improved High-Quality Draft
            Assembly Method          :: Unknown program v. before 2013-04-19
            Genome Coverage          :: Unknown
            Sequencing Technology    :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000421185.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:09:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,599
            CDSs (total)                      :: 3,544
            Genes (coding)                    :: 3,519
            CDSs (with protein)               :: 3,519
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 2 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 25
            CDSs (without protein)            :: 25
            Pseudo Genes (ambiguous residues) :: 0 of 25
            Pseudo Genes (frameshifted)       :: 4 of 25
            Pseudo Genes (incomplete)         :: 23 of 25
            Pseudo Genes (internal stop)      :: 0 of 25
            Pseudo Genes (multiple problems)  :: 2 of 25
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3852644
                     /organism="Ornithinimicrobium pekingense DSM 21552"
                     /mol_type="genomic DNA"
                     /strain="DSM 21552"
                     /culture_collection="DSM:21552"
                     /type_material="type strain of Ornithinimicrobium
                     pekingense"
                     /db_xref="taxon:1122622"
                     /geo_loc_name="China"
                     /lat_lon="39.92 N 116.40 E"
WGS         ATWJ01000001-ATWJ01000015
WGS_SCAFLD  NZ_ATWJ01000001-NZ_ATWJ01000015
//
LOCUS       NZ_CDVEOO010000000   4408795 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Marinomonas shanghaiensis isolate MarMAG_002898, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVEOO000000000
VERSION     NZ_CDVEOO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737679
            Assembly: GCF_977664215.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Marinomonas shanghaiensis (freshwater metagenome)
  ORGANISM  Marinomonas shanghaiensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Oceanospirillaceae; Marinomonas.
REFERENCE   1  (bases 1 to 4408795)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVEOO000000000.1.
            The Marinomonas shanghaiensis whole genome shotgun (WGS) project
            has the project accession NZ_CDVEOO000000000.  This version of the
            project (01) has the accession number NZ_CDVEOO010000000, and
            consists of sequences CDVEOO010000001-CDVEOO010000036.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977664215.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:34:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,075
            CDSs (total)                      :: 4,030
            Genes (coding)                    :: 4,015
            CDSs (with protein)               :: 4,015
            Genes (RNA)                       :: 45
            tRNAs                             :: 39
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 15
            CDSs (without protein)            :: 15
            Pseudo Genes (ambiguous residues) :: 0 of 15
            Pseudo Genes (frameshifted)       :: 1 of 15
            Pseudo Genes (incomplete)         :: 13 of 15
            Pseudo Genes (internal stop)      :: 2 of 15
            Pseudo Genes (multiple problems)  :: 1 of 15
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4408795
                     /organism="Marinomonas shanghaiensis"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_002898"
                     /isolation_source="Bay water"
                     /db_xref="taxon:2202418"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /metagenome_source="freshwater metagenome"
                     /metagenomic
WGS         CDVEOO010000001-CDVEOO010000036
WGS_SCAFLD  NZ_CDVEOO010000001-NZ_CDVEOO010000036
//
LOCUS       NZ_JBSWUP010000000   4211528 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Microbulbifer sp. ABF4_077, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWUP000000000
VERSION     NZ_JBSWUP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862003
            Assembly: GCF_056159125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Microbulbifer sp. ABF4_077
  ORGANISM  Microbulbifer sp. ABF4_077
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Cellvibrionales; Microbulbiferaceae; Microbulbifer.
REFERENCE   1  (bases 1 to 4211528)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWUP000000000.1.
            The Microbulbifer sp. ABF4_077 whole genome shotgun (WGS) project
            has the project accession NZ_JBSWUP000000000.  This version of the
            project (01) has the accession number NZ_JBSWUP010000000, and
            consists of sequences JBSWUP010000001-JBSWUP010000003.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 805x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056159125.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:04:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,455
            CDSs (total)                      :: 3,395
            Genes (coding)                    :: 3,372
            CDSs (with protein)               :: 3,372
            Genes (RNA)                       :: 60
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 23
            CDSs (without protein)            :: 23
            Pseudo Genes (ambiguous residues) :: 0 of 23
            Pseudo Genes (frameshifted)       :: 13 of 23
            Pseudo Genes (incomplete)         :: 11 of 23
            Pseudo Genes (internal stop)      :: 5 of 23
            Pseudo Genes (multiple problems)  :: 4 of 23
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4211528
                     /organism="Microbulbifer sp. ABF4_077"
                     /mol_type="genomic DNA"
                     /strain="ABF4_077"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477719"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWUP010000001-JBSWUP010000003
WGS_SCAFLD  NZ_JBSWUP010000001-NZ_JBSWUP010000003
//
LOCUS       NZ_CDVOGY010000000   4351681 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Marinobacter salarius isolate MarMAG_096365, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVOGY000000000
VERSION     NZ_CDVOGY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120738071
            Assembly: GCF_977729965.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Marinobacter salarius (marine metagenome)
  ORGANISM  Marinobacter salarius
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (bases 1 to 4351681)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVOGY000000000.1.
            The Marinobacter salarius whole genome shotgun (WGS) project has
            the project accession NZ_CDVOGY000000000.  This version of the
            project (01) has the accession number NZ_CDVOGY010000000, and
            consists of sequences CDVOGY010000001-CDVOGY010000034.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977729965.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:43:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,976
            CDSs (total)                      :: 3,931
            Genes (coding)                    :: 3,910
            CDSs (with protein)               :: 3,910
            Genes (RNA)                       :: 45
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 4 of 21
            Pseudo Genes (incomplete)         :: 20 of 21
            Pseudo Genes (internal stop)      :: 2 of 21
            Pseudo Genes (multiple problems)  :: 4 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4351681
                     /organism="Marinobacter salarius"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_096365"
                     /isolation_source="Pacific Ocean"
                     /db_xref="taxon:1420917"
                     /environmental_sample
                     /geo_loc_name="Pacific Ocean"
                     /collection_date="2013-06-22"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVOGY010000001-CDVOGY010000034
WGS_SCAFLD  NZ_CDVOGY010000001-NZ_CDVOGY010000034
//
LOCUS       NZ_JANC01000000      2153240 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Olsenella uli MSTE5, whole genome shotgun sequencing project.
ACCESSION   NZ_JANC00000000
VERSION     NZ_JANC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02641569
            Assembly: GCF_000524335.1
KEYWORDS    WGS; HIGH_QUALITY_DRAFT; RefSeq.
SOURCE      Olsenella uli MSTE5
  ORGANISM  Olsenella uli MSTE5
            Bacteria; Bacillati; Actinomycetota; Coriobacteriia;
            Coriobacteriales; Atopobiaceae; Olsenella.
REFERENCE   1  (bases 1 to 2153240)
  AUTHORS   Durkin,A.S., McCorrison,J., Torralba,M., Gillis,M., Haft,D.H.,
            Methe,B., Sutton,G. and Nelson,K.E.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-JAN-2014) The J. Craig Venter Institute, 9704 Medical
            Center Dr., Rockville, MD 20850, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JANC00000000.1.
            The Olsenella uli MSTE5 whole genome shotgun (WGS) project has the
            project accession NZ_JANC00000000.  This version of the project
            (01) has the accession number NZ_JANC01000000, and consists of
            sequences JANC01000001-JANC01000014.
            This is a reference genome for the Human Microbiome Project. This
            project is co-owned with the Human Microbiome Project DACC.
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: High-Quality Draft
            Current Finishing Status :: High-Quality Draft
            Assembly Method          :: SPAdes v. 2.0
            Assembly Name            :: OulMSTE5v1.0
            Genome Coverage          :: 73x
            Sequencing Technology    :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000524335.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:09:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,956
            CDSs (total)                      :: 1,906
            Genes (coding)                    :: 1,893
            CDSs (with protein)               :: 1,893
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 1 of 13
            Pseudo Genes (incomplete)         :: 12 of 13
            Pseudo Genes (internal stop)      :: 0 of 13
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2153240
                     /organism="Olsenella uli MSTE5"
                     /mol_type="genomic DNA"
                     /strain="MSTE5"
                     /db_xref="HMP:1503"
                     /db_xref="taxon:1190621"
WGS         JANC01000001-JANC01000014
WGS_SCAFLD  NZ_JANC01000001-NZ_JANC01000014
//
LOCUS       NZ_JACAVN010000000   2878393 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain N18-0707, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JACAVN000000000
VERSION     NZ_JACAVN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN15325568
            Assembly: GCF_013402705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2878393)
  AUTHORS   Stevens,M.J.A., Bloemberg,G., Nusch-Inderbinnen,M. and Stephan,R.
  TITLE     Two Listeria outbreaks in Switzerland in 2018 and 2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2878393)
  AUTHORS   Stevens,M.J.A., Bloemberg,G., Nusch-Inderbinnen,M. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-JUN-2020) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JACAVN000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JACAVN000000000.  This version of the
            project (01) has the accession number NZ_JACAVN010000000, and
            consists of sequences JACAVN010000001-JACAVN010000022.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2020
            Assembly Method        :: SPAdes v. 3.13.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 53.95x
            Sequencing Technology  :: Illumina MiniSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013402705.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:09:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,876
            CDSs (total)                      :: 2,819
            Genes (coding)                    :: 2,789
            CDSs (with protein)               :: 2,789
            Genes (RNA)                       :: 57
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2, 2 (5S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 30
            CDSs (without protein)            :: 30
            Pseudo Genes (ambiguous residues) :: 0 of 30
            Pseudo Genes (frameshifted)       :: 16 of 30
            Pseudo Genes (incomplete)         :: 14 of 30
            Pseudo Genes (internal stop)      :: 5 of 30
            Pseudo Genes (multiple problems)  :: 5 of 30
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2878393
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="N18-0707"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /collection_date="2018"
                     /collected_by="NENT"
                     /genotype="ST6"
WGS         JACAVN010000001-JACAVN010000022
WGS_SCAFLD  NZ_JACAVN010000001-NZ_JACAVN010000022
//
LOCUS       NZ_AONB01000000      4027646 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Nitrincola nitratireducens strain AK23, whole genome shotgun
            sequencing project.
ACCESSION   NZ_AONB00000000
VERSION     NZ_AONB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02951920
            Assembly: GCF_000585235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Nitrincola nitratireducens
  ORGANISM  Nitrincola nitratireducens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Oceanospirillaceae; Nitrincola.
REFERENCE   1  (bases 1 to 4027646)
  AUTHORS   Singh,A., Vaidya,B., Tanuku,N.R. and Pinnaka,A.K.
  TITLE     Nitrincola nitratireducens sp. nov. isolated from a haloalkaline
            crater lake
  JOURNAL   Syst Appl Microbiol 38 (8), 555-562 (2015)
   PUBMED   26481633
REFERENCE   2  (bases 1 to 4027646)
  AUTHORS   Singh,A., Pinnaka,A.K. and Vaidya,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-NOV-2012) Microbial Type Culture Collection and Gene
            Bank (MTCC), Institute of Microbial Technology, Sector 39A,
            Chandigarh, Chandigarh 160036, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AONB00000000.1.
            The Nitrincola nitratireducens whole genome shotgun (WGS) project
            has the project accession NZ_AONB00000000.  This version of the
            project (01) has the accession number NZ_AONB01000000, and consists
            of sequences AONB01000001-AONB01000068.
            Annotated using prokka 1.5.2 from http://www.vicbioinformatics.com.
            Bacteria and source DNA available from Dr. P. Anil Kumar, MTCC,
            Institute of Microbial Technology, Sector 39A, Chandigarh, 160036,
            India.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Newbler v. 2.7
            Genome Coverage       :: 107.0x
            Sequencing Technology :: IonTorrent
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000585235.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:21:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,965
            CDSs (total)                      :: 3,907
            Genes (coding)                    :: 3,674
            CDSs (with protein)               :: 3,674
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 233
            CDSs (without protein)            :: 233
            Pseudo Genes (ambiguous residues) :: 0 of 233
            Pseudo Genes (frameshifted)       :: 202 of 233
            Pseudo Genes (incomplete)         :: 45 of 233
            Pseudo Genes (internal stop)      :: 6 of 233
            Pseudo Genes (multiple problems)  :: 18 of 233
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4027646
                     /organism="Nitrincola nitratireducens"
                     /mol_type="genomic DNA"
                     /strain="AK23"
                     /isolation_source="alkaline lake"
                     /type_material="type strain of Nitrincola nitratireducens"
                     /db_xref="taxon:1229521"
                     /geo_loc_name="India"
WGS         AONB01000001-AONB01000068
WGS_SCAFLD  NZ_AONB01000001-NZ_AONB01000068
//
LOCUS       NZ_JBSWTJ010000000   4404282 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mesobacillus sp. ABV4_180, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWTJ000000000
VERSION     NZ_JBSWTJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862041
            Assembly: GCF_056158485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mesobacillus sp. ABV4_180
  ORGANISM  Mesobacillus sp. ABV4_180
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Mesobacillus.
REFERENCE   1  (bases 1 to 4404282)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWTJ000000000.1.
            The Mesobacillus sp. ABV4_180 whole genome shotgun (WGS) project
            has the project accession NZ_JBSWTJ000000000.  This version of the
            project (01) has the accession number NZ_JBSWTJ010000000, and
            consists of sequences JBSWTJ010000001-JBSWTJ010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 841x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056158485.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:11:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,483
            CDSs (total)                      :: 4,362
            Genes (coding)                    :: 4,324
            CDSs (with protein)               :: 4,324
            Genes (RNA)                       :: 121
            rRNAs                             :: 10, 10, 10 (5S, 16S, 23S)
            complete rRNAs                    :: 10, 10, 10 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 38
            CDSs (without protein)            :: 38
            Pseudo Genes (ambiguous residues) :: 0 of 38
            Pseudo Genes (frameshifted)       :: 11 of 38
            Pseudo Genes (incomplete)         :: 24 of 38
            Pseudo Genes (internal stop)      :: 7 of 38
            Pseudo Genes (multiple problems)  :: 4 of 38
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4404282
                     /organism="Mesobacillus sp. ABV4_180"
                     /mol_type="genomic DNA"
                     /strain="ABV4_180"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477701"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-07-26"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWTJ010000001-JBSWTJ010000002
WGS_SCAFLD  NZ_JBSWTJ010000001-NZ_JBSWTJ010000002
//
LOCUS       NZ_MJQH01000000      3011057 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain BCW_4293, whole genome shotgun
            sequencing project.
ACCESSION   NZ_MJQH00000000
VERSION     NZ_MJQH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03358021
            Assembly: GCF_001827305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 3011057)
  AUTHORS   Chen,P., Weimer,B.C., Kong,N. and Huang,B.
  TITLE     100K Listeria isolates
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3011057)
  AUTHORS   Chen,P., Weimer,B.C., Kong,N. and Huang,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-SEP-2016) School of Veterinary Medicine, UCDavis,
            1089 Veterinary Medicine Drive, Davis, CA 95616, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MJQH00000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_MJQH00000000.  This version of the project
            (01) has the accession number NZ_MJQH01000000, and consists of
            sequences MJQH01000001-MJQH01000026.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Bart C. Weimer, UC Davis.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 02-FEB-2013
            Assembly Method        :: ABySS v. 1.5.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 53.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001827305.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:50:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,030
            CDSs (total)                      :: 2,972
            Genes (coding)                    :: 2,950
            CDSs (with protein)               :: 2,950
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 4, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 4 (16S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 4 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 4 of 22
            Pseudo Genes (multiple problems)  :: 1 of 22
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3011057
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="BCW_4293"
                     /db_xref="taxon:1639"
WGS         MJQH01000001-MJQH01000026
WGS_SCAFLD  NZ_MJQH01000001-NZ_MJQH01000026
//
LOCUS       NZ_QAZL01000000      2031050 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Limosilactobacillus reuteri strain DS22_10, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QAZL00000000
VERSION     NZ_QAZL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06464108
            Assembly: GCF_003064585.1
KEYWORDS    WGS; RefSeq.
SOURCE      Limosilactobacillus reuteri
  ORGANISM  Limosilactobacillus reuteri
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Limosilactobacillus.
REFERENCE   1  (bases 1 to 2031050)
  AUTHORS   Gangiredla,J., Barnaba,T.J., Mammel,M.K., Lacher,D.W., Elkins,C.A.,
            Lampel,K.A., Whitehouse,C.A. and Tartera,C.
  TITLE     Fifty-Six Draft Genome Sequences of 10 Lactobacillus Species from
            22 Commercial Dietary Supplements
  JOURNAL   Genome Announc 6 (26), e00621-18 (2018)
   PUBMED   29954914
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2031050)
  AUTHORS   Gangiredla,J., Barnaba,T.J., Mammel,M.K., Lacher,D.W., Elkins,C.A.,
            Lampel,K.A., Whitehouse,C.A. and Tartera,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2018) Department of Molecular Biology, USFDA,
            8301 Muirkirk Road, Laurel, MD 20708, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QAZL00000000.1.
            The Limosilactobacillus reuteri whole genome shotgun (WGS) project
            has the project accession NZ_QAZL00000000.  This version of the
            project (01) has the accession number NZ_QAZL01000000, and consists
            of sequences QAZL01000001-QAZL01000129.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 67.3x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003064585.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:49:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,098
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,888
            CDSs (with protein)               :: 1,888
            Genes (RNA)                       :: 91
            rRNAs                             :: 6, 9, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1 (5S, 16S)
            partial rRNAs                     :: 8, 5 (16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 119
            CDSs (without protein)            :: 119
            Pseudo Genes (ambiguous residues) :: 0 of 119
            Pseudo Genes (frameshifted)       :: 42 of 119
            Pseudo Genes (incomplete)         :: 66 of 119
            Pseudo Genes (internal stop)      :: 34 of 119
            Pseudo Genes (multiple problems)  :: 22 of 119
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2031050
                     /organism="Limosilactobacillus reuteri"
                     /mol_type="genomic DNA"
                     /strain="DS22_10"
                     /isolation_source="Commercial dietary supplements"
                     /host="Homo sapiens"
                     /db_xref="taxon:1598"
                     /geo_loc_name="USA: MD"
                     /collection_date="2016-12-16"
WGS         QAZL01000001-QAZL01000129
WGS_SCAFLD  NZ_QAZL01000001-NZ_QAZL01000129
//
LOCUS       NZ_QAZM01000000      2032246 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Limosilactobacillus reuteri strain DS17_10, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QAZM00000000
VERSION     NZ_QAZM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05942022
            Assembly: GCF_003065345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Limosilactobacillus reuteri
  ORGANISM  Limosilactobacillus reuteri
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Limosilactobacillus.
REFERENCE   1  (bases 1 to 2032246)
  AUTHORS   Gangiredla,J., Barnaba,T.J., Mammel,M.K., Lacher,D.W., Elkins,C.A.,
            Lampel,K.A., Whitehouse,C.A. and Tartera,C.
  TITLE     Fifty-Six Draft Genome Sequences of 10 Lactobacillus Species from
            22 Commercial Dietary Supplements
  JOURNAL   Genome Announc 6 (26), e00621-18 (2018)
   PUBMED   29954914
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2032246)
  AUTHORS   Gangiredla,J., Barnaba,T.J., Mammel,M.K., Lacher,D.W., Elkins,C.A.,
            Lampel,K.A., Whitehouse,C.A. and Tartera,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-APR-2018) Department of Molecular Biology, USFDA,
            8301 Muirkirk Road, Laurel, MD 20708, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QAZM00000000.1.
            The Limosilactobacillus reuteri whole genome shotgun (WGS) project
            has the project accession NZ_QAZM00000000.  This version of the
            project (01) has the accession number NZ_QAZM01000000, and consists
            of sequences QAZM01000001-QAZM01000135.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 63.4x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003065345.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:54:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,095
            CDSs (total)                      :: 2,004
            Genes (coding)                    :: 1,893
            CDSs (with protein)               :: 1,893
            Genes (RNA)                       :: 91
            rRNAs                             :: 6, 9, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1 (5S, 16S)
            partial rRNAs                     :: 8, 5 (16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 37 of 111
            Pseudo Genes (incomplete)         :: 61 of 111
            Pseudo Genes (internal stop)      :: 34 of 111
            Pseudo Genes (multiple problems)  :: 20 of 111
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2032246
                     /organism="Limosilactobacillus reuteri"
                     /mol_type="genomic DNA"
                     /strain="DS17_10"
                     /isolation_source="Commercial dietary supplements"
                     /host="Homo sapiens"
                     /db_xref="taxon:1598"
                     /geo_loc_name="USA: MD"
                     /collection_date="2016-10-07"
WGS         QAZM01000001-QAZM01000135
WGS_SCAFLD  NZ_QAZM01000001-NZ_QAZM01000135
//
LOCUS       NZ_JACAVK010000000   2877005 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain N18-1074, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JACAVK000000000
VERSION     NZ_JACAVK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN15325571
            Assembly: GCF_013402665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2877005)
  AUTHORS   Stevens,M.J.A., Bloemberg,G., Nusch-Inderbinnen,M. and Stephan,R.
  TITLE     Two Listeria outbreaks in Switzerland in 2018 and 2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2877005)
  AUTHORS   Stevens,M.J.A., Bloemberg,G., Nusch-Inderbinnen,M. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-JUN-2020) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JACAVK000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JACAVK000000000.  This version of the
            project (01) has the accession number NZ_JACAVK010000000, and
            consists of sequences JACAVK010000001-JACAVK010000023.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2020
            Assembly Method        :: SPAdes v. 3.13.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 62.29x
            Sequencing Technology  :: Illumina MiniSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013402665.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:06:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,879
            CDSs (total)                      :: 2,822
            Genes (coding)                    :: 2,790
            CDSs (with protein)               :: 2,790
            Genes (RNA)                       :: 57
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2, 2 (5S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 32
            CDSs (without protein)            :: 32
            Pseudo Genes (ambiguous residues) :: 0 of 32
            Pseudo Genes (frameshifted)       :: 16 of 32
            Pseudo Genes (incomplete)         :: 16 of 32
            Pseudo Genes (internal stop)      :: 5 of 32
            Pseudo Genes (multiple problems)  :: 5 of 32
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2877005
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="N18-1074"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /collection_date="2018"
                     /collected_by="NENT"
                     /genotype="ST6"
WGS         JACAVK010000001-JACAVK010000023
WGS_SCAFLD  NZ_JACAVK010000001-NZ_JACAVK010000023
//
LOCUS       NZ_CDVEOQ010000000   4432249 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Marinomonas shanghaiensis isolate MarMAG_002899, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVEOQ000000000
VERSION     NZ_CDVEOQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737683
            Assembly: GCF_977664245.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Marinomonas shanghaiensis (freshwater metagenome)
  ORGANISM  Marinomonas shanghaiensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Oceanospirillaceae; Marinomonas.
REFERENCE   1  (bases 1 to 4432249)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVEOQ000000000.1.
            The Marinomonas shanghaiensis whole genome shotgun (WGS) project
            has the project accession NZ_CDVEOQ000000000.  This version of the
            project (01) has the accession number NZ_CDVEOQ010000000, and
            consists of sequences CDVEOQ010000001-CDVEOQ010000039.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977664245.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:32:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,103
            CDSs (total)                      :: 4,056
            Genes (coding)                    :: 4,033
            CDSs (with protein)               :: 4,033
            Genes (RNA)                       :: 47
            rRNAs                             :: 1, 1 (5S, 16S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            tRNAs                             :: 39
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 23
            CDSs (without protein)            :: 23
            Pseudo Genes (ambiguous residues) :: 0 of 23
            Pseudo Genes (frameshifted)       :: 2 of 23
            Pseudo Genes (incomplete)         :: 20 of 23
            Pseudo Genes (internal stop)      :: 2 of 23
            Pseudo Genes (multiple problems)  :: 1 of 23
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4432249
                     /organism="Marinomonas shanghaiensis"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_002899"
                     /isolation_source="Bay water"
                     /db_xref="taxon:2202418"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /metagenome_source="freshwater metagenome"
                     /metagenomic
WGS         CDVEOQ010000001-CDVEOQ010000039
WGS_SCAFLD  NZ_CDVEOQ010000001-NZ_CDVEOQ010000039
//
LOCUS       NZ_CDVETH010000000   4636838 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Marinobacter salarius isolate MarMAG_096378, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVETH000000000
VERSION     NZ_CDVETH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120738528
            Assembly: GCF_977665455.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Marinobacter salarius (marine metagenome)
  ORGANISM  Marinobacter salarius
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (bases 1 to 4636838)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVETH000000000.1.
            The Marinobacter salarius whole genome shotgun (WGS) project has
            the project accession NZ_CDVETH000000000.  This version of the
            project (01) has the accession number NZ_CDVETH010000000, and
            consists of sequences CDVETH010000001-CDVETH010000040.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977665455.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:44:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,303
            CDSs (total)                      :: 4,256
            Genes (coding)                    :: 4,230
            CDSs (with protein)               :: 4,230
            Genes (RNA)                       :: 47
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 5 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 2 of 26
            Pseudo Genes (multiple problems)  :: 1 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4636838
                     /organism="Marinobacter salarius"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_096378"
                     /isolation_source="surface seawater"
                     /db_xref="taxon:1420917"
                     /environmental_sample
                     /geo_loc_name="Costa Rica"
                     /collection_date="2005-07-01"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVETH010000001-CDVETH010000040
WGS_SCAFLD  NZ_CDVETH010000001-NZ_CDVETH010000040
//
LOCUS       NZ_CBVJ010000000     6257966 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Paenibacillus gorillae isolate G1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_CBVJ000000000
VERSION     NZ_CBVJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA3138837
            Assembly: GCF_000513275.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paenibacillus gorillae
  ORGANISM  Paenibacillus gorillae
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1
  AUTHORS   Keita,M.B., Caputo,A., Robert,C., Raoult,D., Fournier,P.E. and
            Bittar,F.
  TITLE     Non contiguous-finished genome sequence and description of
            Paenibacillus massiliogorillae sp. nov
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6257966)
  AUTHORS   GENOMES,U.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-OCT-2013) Fac de medecine, URMITE, 27 Bd J Moulin,
            13385 Marseille Cedex 05, FRANCE
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBVJ000000000.1.
            The Paenibacillus gorillae whole genome shotgun (WGS) project has
            the project accession NZ_CBVJ000000000.  This version of the
            project (01) has the accession number NZ_CBVJ010000000, and
            consists of sequences CBVJ010000001-CBVJ010000167.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000513275.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:23:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,820
            CDSs (total)                      :: 5,754
            Genes (coding)                    :: 5,589
            CDSs (with protein)               :: 5,589
            Genes (RNA)                       :: 66
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 165
            CDSs (without protein)            :: 165
            Pseudo Genes (ambiguous residues) :: 0 of 165
            Pseudo Genes (frameshifted)       :: 115 of 165
            Pseudo Genes (incomplete)         :: 59 of 165
            Pseudo Genes (internal stop)      :: 6 of 165
            Pseudo Genes (multiple problems)  :: 12 of 165
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6257966
                     /organism="Paenibacillus gorillae"
                     /mol_type="genomic DNA"
                     /isolate="G1"
                     /type_material="type strain of Paenibacillus gorillae"
                     /db_xref="taxon:1243662"
WGS         CBVJ010000001-CBVJ010000167
WGS_SCAFLD  NZ_CBVJ010000001-NZ_CBVJ010000167
//
LOCUS       NZ_JBSZMO010000000   4562172 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Microbacterium sp. F01, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSZMO000000000
VERSION     NZ_JBSZMO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52752030
            Assembly: GCF_056156365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Microbacterium sp. F01
  ORGANISM  Microbacterium sp. F01
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (bases 1 to 4562172)
  AUTHORS   Chen,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-DEC-2025) Department of Molecular Biology, Guilin
            Medical University, #1 Zhiyuan Road, Guilin 541199, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSZMO000000000.1.
            The Microbacterium sp. F01 whole genome shotgun (WGS) project has
            the project accession NZ_JBSZMO000000000.  This version of the
            project (01) has the accession number NZ_JBSZMO010000000, and
            consists of sequence JBSZMO010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from #1 Zhiyuan road, Guilin,
            Guangxi, China.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 05-MAR-2024
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 506.0x
            Sequencing Technology  :: Illumina; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056156365.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:28:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,186
            CDSs (total)                      :: 4,128
            Genes (coding)                    :: 4,100
            CDSs (with protein)               :: 4,100
            Genes (RNA)                       :: 58
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 3 of 28
            Pseudo Genes (incomplete)         :: 26 of 28
            Pseudo Genes (internal stop)      :: 0 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4562172
                     /organism="Microbacterium sp. F01"
                     /mol_type="genomic DNA"
                     /strain="F01"
                     /isolation_source="soil"
                     /db_xref="taxon:3469809"
                     /geo_loc_name="China: Guangxi, Guilin"
                     /lat_lon="25.29 N 110.29 E"
                     /collection_date="2022-09-20"
WGS         JBSZMO010000001
WGS_SCAFLD  NZ_CM149592
//
LOCUS       NZ_CDVFFS010000000   4659289 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Marinobacter salarius isolate MarMAG_096367, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVFFS000000000
VERSION     NZ_CDVFFS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120738516
            Assembly: GCF_977668685.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Marinobacter salarius (marine metagenome)
  ORGANISM  Marinobacter salarius
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (bases 1 to 4659289)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVFFS000000000.1.
            The Marinobacter salarius whole genome shotgun (WGS) project has
            the project accession NZ_CDVFFS000000000.  This version of the
            project (01) has the accession number NZ_CDVFFS010000000, and
            consists of sequences CDVFFS010000001-CDVFFS010000041.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977668685.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:45:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,311
            CDSs (total)                      :: 4,264
            Genes (coding)                    :: 4,223
            CDSs (with protein)               :: 4,223
            Genes (RNA)                       :: 47
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 41
            CDSs (without protein)            :: 41
            Pseudo Genes (ambiguous residues) :: 0 of 41
            Pseudo Genes (frameshifted)       :: 14 of 41
            Pseudo Genes (incomplete)         :: 37 of 41
            Pseudo Genes (internal stop)      :: 4 of 41
            Pseudo Genes (multiple problems)  :: 11 of 41
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4659289
                     /organism="Marinobacter salarius"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_096367"
                     /isolation_source="surface seawater"
                     /db_xref="taxon:1420917"
                     /environmental_sample
                     /geo_loc_name="Costa Rica"
                     /collection_date="2005-07-01"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVFFS010000001-CDVFFS010000041
WGS_SCAFLD  NZ_CDVFFS010000001-NZ_CDVFFS010000041
//
LOCUS       NZ_CDVFOF010000000   4478790 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Marinobacter maritimus isolate MarMAG_001927, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVFOF000000000
VERSION     NZ_CDVFOF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737885
            Assembly: GCF_977670915.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Marinobacter maritimus (marine metagenome)
  ORGANISM  Marinobacter maritimus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (bases 1 to 4478790)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVFOF000000000.1.
            The Marinobacter maritimus whole genome shotgun (WGS) project has
            the project accession NZ_CDVFOF000000000.  This version of the
            project (01) has the accession number NZ_CDVFOF010000000, and
            consists of sequences CDVFOF010000001-CDVFOF010000041.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977670915.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:40:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,180
            CDSs (total)                      :: 4,132
            Genes (coding)                    :: 4,100
            CDSs (with protein)               :: 4,100
            Genes (RNA)                       :: 48
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 32
            CDSs (without protein)            :: 32
            Pseudo Genes (ambiguous residues) :: 0 of 32
            Pseudo Genes (frameshifted)       :: 5 of 32
            Pseudo Genes (incomplete)         :: 26 of 32
            Pseudo Genes (internal stop)      :: 2 of 32
            Pseudo Genes (multiple problems)  :: 1 of 32
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4478790
                     /organism="Marinobacter maritimus"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_001927"
                     /isolation_source="Pacific Ocean"
                     /db_xref="taxon:277961"
                     /environmental_sample
                     /geo_loc_name="Pacific Ocean"
                     /collection_date="2010-02-08"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVFOF010000001-CDVFOF010000041
WGS_SCAFLD  NZ_CDVFOF010000001-NZ_CDVFOF010000041
//
LOCUS       NZ_JBSWUK010000000   4956761 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Microbulbifer variabilis strain ABF4_145, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSWUK000000000
VERSION     NZ_JBSWUK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862010
            Assembly: GCF_056159025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Microbulbifer variabilis
  ORGANISM  Microbulbifer variabilis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Cellvibrionales; Microbulbiferaceae; Microbulbifer.
REFERENCE   1  (bases 1 to 4956761)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWUK000000000.1.
            The Microbulbifer variabilis whole genome shotgun (WGS) project has
            the project accession NZ_JBSWUK000000000.  This version of the
            project (01) has the accession number NZ_JBSWUK010000000, and
            consists of sequences JBSWUK010000001-JBSWUK010000005.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 778x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056159025.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:14:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,403
            CDSs (total)                      :: 4,325
            Genes (coding)                    :: 4,266
            CDSs (with protein)               :: 4,266
            Genes (RNA)                       :: 78
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 16 of 59
            Pseudo Genes (incomplete)         :: 46 of 59
            Pseudo Genes (internal stop)      :: 9 of 59
            Pseudo Genes (multiple problems)  :: 12 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4956761
                     /organism="Microbulbifer variabilis"
                     /mol_type="genomic DNA"
                     /strain="ABF4_145"
                     /isolation_source="Marine"
                     /db_xref="taxon:266805"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWUK010000001-JBSWUK010000005
WGS_SCAFLD  NZ_JBSWUK010000001-NZ_JBSWUK010000005
//
LOCUS       NZ_ASSG01000000      6986194 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Paenibacillus graminis RSA19, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ASSG00000000
VERSION     NZ_ASSG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02597343
            Assembly: GCF_000520655.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paenibacillus graminis RSA19
  ORGANISM  Paenibacillus graminis RSA19
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (bases 1 to 6986194)
  AUTHORS   Xie,J. and Chen,S.
  TITLE     Comparative Genomics of Paenibacillus
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6986194)
  AUTHORS   Xie,J. and Chen,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2013) The State Key Laboratory for
            Agrobiotechnology, China Agricultural University, No. 2
            Yuanmingyuan West Road, Haidian District, Beijing, Beijing 100094,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ASSG00000000.1.
            The Paenibacillus graminis RSA19 whole genome shotgun (WGS) project
            has the project accession NZ_ASSG00000000.  This version of the
            project (01) has the accession number NZ_ASSG01000000, and consists
            of sequences ASSG01000001-ASSG01000795.
            Source DNA available from The State Key Laboratory for
            Agrobiotechnology, China Agricultural University, Beijing 100094,
            China.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SOAPdenovo v. 1.04
            Genome Coverage       :: 84.8x
            Sequencing Technology :: Illumina GAII
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000520655.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:32:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,698
            CDSs (total)                      :: 6,631
            Genes (coding)                    :: 6,377
            CDSs (with protein)               :: 6,377
            Genes (RNA)                       :: 67
            rRNAs                             :: 2, 4 (16S, 23S)
            partial rRNAs                     :: 2, 4 (16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 254
            CDSs (without protein)            :: 254
            Pseudo Genes (ambiguous residues) :: 0 of 254
            Pseudo Genes (frameshifted)       :: 31 of 254
            Pseudo Genes (incomplete)         :: 233 of 254
            Pseudo Genes (internal stop)      :: 6 of 254
            Pseudo Genes (multiple problems)  :: 16 of 254
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6986194
                     /organism="Paenibacillus graminis RSA19"
                     /mol_type="genomic DNA"
                     /strain="RSA19"
                     /type_material="type strain of Paenibacillus graminis"
                     /db_xref="taxon:1333858"
WGS         ASSG01000001-ASSG01000795
WGS_SCAFLD  NZ_ASSG01000001-NZ_ASSG01000795
//
LOCUS       NZ_JBSWWI010000000   4594592 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Microbulbifer sp. ABH2_005, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWWI000000000
VERSION     NZ_JBSWWI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861952
            Assembly: GCF_056160005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Microbulbifer sp. ABH2_005
  ORGANISM  Microbulbifer sp. ABH2_005
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Cellvibrionales; Microbulbiferaceae; Microbulbifer.
REFERENCE   1  (bases 1 to 4594592)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWWI000000000.1.
            The Microbulbifer sp. ABH2_005 whole genome shotgun (WGS) project
            has the project accession NZ_JBSWWI000000000.  This version of the
            project (01) has the accession number NZ_JBSWWI010000000, and
            consists of sequences JBSWWI010000001-JBSWWI010000019.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 535x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056160005.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:18:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,011
            CDSs (total)                      :: 3,935
            Genes (coding)                    :: 3,907
            CDSs (with protein)               :: 3,907
            Genes (RNA)                       :: 76
            rRNAs                             :: 3, 4, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 4 (16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 9 of 28
            Pseudo Genes (incomplete)         :: 19 of 28
            Pseudo Genes (internal stop)      :: 10 of 28
            Pseudo Genes (multiple problems)  :: 8 of 28
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4594592
                     /organism="Microbulbifer sp. ABH2_005"
                     /mol_type="genomic DNA"
                     /strain="ABH2_005"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477738"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWWI010000001-JBSWWI010000019
WGS_SCAFLD  NZ_JBSWWI010000001-NZ_JBSWWI010000019
//
LOCUS       NZ_JBSWUX010000000   4389922 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mesobacillus sp. ABV4_183, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWUX000000000
VERSION     NZ_JBSWUX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861994
            Assembly: GCF_056159285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mesobacillus sp. ABV4_183
  ORGANISM  Mesobacillus sp. ABV4_183
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Mesobacillus.
REFERENCE   1  (bases 1 to 4389922)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWUX000000000.1.
            The Mesobacillus sp. ABV4_183 whole genome shotgun (WGS) project
            has the project accession NZ_JBSWUX000000000.  This version of the
            project (01) has the accession number NZ_JBSWUX010000000, and
            consists of sequences JBSWUX010000001-JBSWUX010000020.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1058x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056159285.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:14:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,464
            CDSs (total)                      :: 4,349
            Genes (coding)                    :: 4,315
            CDSs (with protein)               :: 4,315
            Genes (RNA)                       :: 115
            rRNAs                             :: 9, 10, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 83
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 8 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 7 of 34
            Pseudo Genes (multiple problems)  :: 4 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4389922
                     /organism="Mesobacillus sp. ABV4_183"
                     /mol_type="genomic DNA"
                     /strain="ABV4_183"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477725"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-07-26"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWUX010000001-JBSWUX010000020
WGS_SCAFLD  NZ_JBSWUX010000001-NZ_JBSWUX010000020
//
LOCUS       NZ_JBSWWT010000000   4011966 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Microbulbifer sp. ABF4_143, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWWT000000000
VERSION     NZ_JBSWWT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861939
            Assembly: GCF_056160225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Microbulbifer sp. ABF4_143
  ORGANISM  Microbulbifer sp. ABF4_143
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Cellvibrionales; Microbulbiferaceae; Microbulbifer.
REFERENCE   1  (bases 1 to 4011966)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWWT000000000.1.
            The Microbulbifer sp. ABF4_143 whole genome shotgun (WGS) project
            has the project accession NZ_JBSWWT000000000.  This version of the
            project (01) has the accession number NZ_JBSWWT010000000, and
            consists of sequences JBSWWT010000001-JBSWWT010000038.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 285x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056160225.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:23:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,567
            CDSs (total)                      :: 3,498
            Genes (coding)                    :: 3,477
            CDSs (with protein)               :: 3,477
            Genes (RNA)                       :: 69
            rRNAs                             :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2, 1 (5S, 16S)
            tRNAs                             :: 43
            ncRNAs                            :: 23
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 5 of 21
            Pseudo Genes (incomplete)         :: 18 of 21
            Pseudo Genes (internal stop)      :: 1 of 21
            Pseudo Genes (multiple problems)  :: 3 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4011966
                     /organism="Microbulbifer sp. ABF4_143"
                     /mol_type="genomic DNA"
                     /strain="ABF4_143"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477747"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-10-31"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWWT010000001-JBSWWT010000038
WGS_SCAFLD  NZ_JBSWWT010000001-NZ_JBSWWT010000038
//
LOCUS       NZ_QMFB01000000     10232414 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Paenibacillus contaminans strain CKOBP-6, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QMFB00000000
VERSION     NZ_QMFB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09478231
            Assembly: GCF_003285015.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paenibacillus contaminans
  ORGANISM  Paenibacillus contaminans
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (bases 1 to 10232414)
  AUTHORS   Chou,J.H., Lee,J.H., Lin,M.C., Chang,P.S., Arun,A.B., Young,C.C.
            and Chen,W.M.
  TITLE     Paenibacillus contaminans sp. nov., isolated from a contaminated
            laboratory plate
  JOURNAL   Int J Syst Evol Microbiol 59 (Pt 1), 125-129 (2009)
   PUBMED   19126735
REFERENCE   2  (bases 1 to 10232414)
  AUTHORS   Niu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-JUN-2018) School of Life Sciences, Shanghai
            University, No. 333 Nanchen Road, Shanghai 200444, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QMFB00000000.1.
            The Paenibacillus contaminans whole genome shotgun (WGS) project
            has the project accession NZ_QMFB00000000.  This version of the
            project (01) has the accession number NZ_QMFB01000000, and consists
            of sequences QMFB01000001-QMFB01000104.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 147.8x
            Sequencing Technology  :: Illuminate Hiseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003285015.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:38:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 8,283
            CDSs (total)                      :: 8,219
            Genes (coding)                    :: 8,122
            CDSs (with protein)               :: 8,122
            Genes (RNA)                       :: 64
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 3 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 97
            CDSs (without protein)            :: 97
            Pseudo Genes (ambiguous residues) :: 0 of 97
            Pseudo Genes (frameshifted)       :: 18 of 97
            Pseudo Genes (incomplete)         :: 80 of 97
            Pseudo Genes (internal stop)      :: 8 of 97
            Pseudo Genes (multiple problems)  :: 8 of 97
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10232414
                     /organism="Paenibacillus contaminans"
                     /mol_type="genomic DNA"
                     /strain="CKOBP-6"
                     /isolation_source="contaminated laboratory plate"
                     /type_material="type strain of Paenibacillus contaminans"
                     /db_xref="taxon:450362"
                     /geo_loc_name="Taiwan"
                     /collection_date="2008-10-30"
WGS         QMFB01000001-QMFB01000104
WGS_SCAFLD  NZ_QMFB01000001-NZ_QMFB01000104
//
LOCUS       NZ_JBSWXF010000000   5045211 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Microbulbifer variabilis strain ABM4_007, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSWXF000000000
VERSION     NZ_JBSWXF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861927
            Assembly: GCF_056160485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Microbulbifer variabilis
  ORGANISM  Microbulbifer variabilis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Cellvibrionales; Microbulbiferaceae; Microbulbifer.
REFERENCE   1  (bases 1 to 5045211)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWXF000000000.1.
            The Microbulbifer variabilis whole genome shotgun (WGS) project has
            the project accession NZ_JBSWXF000000000.  This version of the
            project (01) has the accession number NZ_JBSWXF010000000, and
            consists of sequences JBSWXF010000001-JBSWXF010000067.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 66x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056160485.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:35:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,592
            CDSs (total)                      :: 4,532
            Genes (coding)                    :: 4,500
            CDSs (with protein)               :: 4,500
            Genes (RNA)                       :: 60
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 32
            CDSs (without protein)            :: 32
            Pseudo Genes (ambiguous residues) :: 0 of 32
            Pseudo Genes (frameshifted)       :: 8 of 32
            Pseudo Genes (incomplete)         :: 25 of 32
            Pseudo Genes (internal stop)      :: 5 of 32
            Pseudo Genes (multiple problems)  :: 6 of 32
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5045211
                     /organism="Microbulbifer variabilis"
                     /mol_type="genomic DNA"
                     /strain="ABM4_007"
                     /isolation_source="Marine"
                     /db_xref="taxon:266805"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWXF010000001-JBSWXF010000067
WGS_SCAFLD  NZ_JBSWXF010000001-NZ_JBSWXF010000067
//
LOCUS       NZ_JBSWXL010000000   3272759 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Marivivens sp. ABH4_498, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWXL000000000
VERSION     NZ_JBSWXL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861921
            Assembly: GCF_056160585.1
KEYWORDS    WGS; RefSeq.
SOURCE      Marivivens sp. ABH4_498
  ORGANISM  Marivivens sp. ABH4_498
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Marivivens group; Marivivens.
REFERENCE   1  (bases 1 to 3272759)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWXL000000000.1.
            The Marivivens sp. ABH4_498 whole genome shotgun (WGS) project has
            the project accession NZ_JBSWXL000000000.  This version of the
            project (01) has the accession number NZ_JBSWXL010000000, and
            consists of sequences JBSWXL010000001-JBSWXL010000032.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 558x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056160585.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:38:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,306
            CDSs (total)                      :: 3,255
            Genes (coding)                    :: 3,229
            CDSs (with protein)               :: 3,229
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 6 of 26
            Pseudo Genes (incomplete)         :: 22 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            Pseudo Genes (multiple problems)  :: 7 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3272759
                     /organism="Marivivens sp. ABH4_498"
                     /mol_type="genomic DNA"
                     /strain="ABH4_498"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477757"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2024-02-16"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWXL010000001-JBSWXL010000032
WGS_SCAFLD  NZ_JBSWXL010000001-NZ_JBSWXL010000032
//
LOCUS       NZ_JACCBW010000000   4296555 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Nocardioides cavernae strain AT2.17, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JACCBW000000000
VERSION     NZ_JACCBW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12794396
            Assembly: GCF_013410035.1
KEYWORDS    WGS; RefSeq.
SOURCE      Nocardioides cavernae
  ORGANISM  Nocardioides cavernae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Nocardioidaceae; Nocardioides.
REFERENCE   1  (bases 1 to 4296555)
  AUTHORS   Partida-Martinez,L.P.
  TITLE     The Agave Microbiome: Exploring the role of microbial communities
            in plant adaptations to desert environments
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4296555)
  AUTHORS   Partida-Martinez,L., Huntemann,M., Clum,A., Wang,J.,
            Palaniappan,K., Ritter,S., Chen,I.-M., Stamatis,D., Reddy,T.,
            O'Malley,R., Daum,C., Shapiro,N., Ivanova,N., Kyrpides,N. and
            Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2020) Prokaryote Super Program, DOE Joint Genome
            Institute, 1 Cyclotron Road, Mail Stop: 91R0183, Berkeley, CA
            94720, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JACCBW000000000.1.
            The Nocardioides cavernae whole genome shotgun (WGS) project has
            the project accession NZ_JACCBW000000000.  This version of the
            project (01) has the accession number NZ_JACCBW010000000, and
            consists of sequences JACCBW010000001-JACCBW010000011.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 349.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013410035.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:22:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,135
            CDSs (total)                      :: 4,082
            Genes (coding)                    :: 4,072
            CDSs (with protein)               :: 4,072
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 1 (5S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 1 of 10
            Pseudo Genes (incomplete)         :: 9 of 10
            Pseudo Genes (internal stop)      :: 0 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4296555
                     /organism="Nocardioides cavernae"
                     /mol_type="genomic DNA"
                     /strain="AT2.17"
                     /db_xref="taxon:1921566"
WGS         JACCBW010000001-JACCBW010000011
WGS_SCAFLD  NZ_JACCBW010000001-NZ_JACCBW010000011
//
LOCUS       NZ_JBSWXV010000000   4147560 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Microbulbifer sp. ABE4_465, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWXV000000000
VERSION     NZ_JBSWXV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861910
            Assembly: GCF_056160765.1
KEYWORDS    WGS; RefSeq.
SOURCE      Microbulbifer sp. ABE4_465
  ORGANISM  Microbulbifer sp. ABE4_465
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Cellvibrionales; Microbulbiferaceae; Microbulbifer.
REFERENCE   1  (bases 1 to 4147560)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWXV000000000.1.
            The Microbulbifer sp. ABE4_465 whole genome shotgun (WGS) project
            has the project accession NZ_JBSWXV000000000.  This version of the
            project (01) has the accession number NZ_JBSWXV010000000, and
            consists of sequences JBSWXV010000001-JBSWXV010000036.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056160765.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:39:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,401
            CDSs (total)                      :: 3,343
            Genes (coding)                    :: 3,333
            CDSs (with protein)               :: 3,333
            Genes (RNA)                       :: 58
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3, 2 (5S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 0 of 10
            Pseudo Genes (incomplete)         :: 9 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4147560
                     /organism="Microbulbifer sp. ABE4_465"
                     /mol_type="genomic DNA"
                     /strain="ABE4_465"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477765"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-11-21"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWXV010000001-JBSWXV010000036
WGS_SCAFLD  NZ_JBSWXV010000001-NZ_JBSWXV010000036
//
LOCUS       NZ_QLVD01000000      3285756 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Ornithinimicrobium murale strain DSM 22056, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QLVD00000000
VERSION     NZ_QLVD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09464003
            Assembly: GCF_003352835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ornithinimicrobium murale
  ORGANISM  Ornithinimicrobium murale
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (bases 1 to 3285756)
  AUTHORS   Zhang,L.-Y., Ming,H., Meng,X.-L., Fang,B.-Z., Jiao,J.-Y.,
            Zhang,X.-T., Li,W.-J. and Nie,G.-X.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUN-2018) School of Life Sciences, Sun Yat-sen
            University, Xingang West Road, Guangzhou, Guangdong 510275, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QLVD00000000.1.
            The Ornithinimicrobium murale whole genome shotgun (WGS) project
            has the project accession NZ_QLVD00000000.  This version of the
            project (01) has the accession number NZ_QLVD01000000, and consists
            of sequences QLVD01000001-QLVD01000033.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.6.0
            Expected Final Version :: yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003352835.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:58:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,111
            CDSs (total)                      :: 3,042
            Genes (coding)                    :: 2,999
            CDSs (with protein)               :: 2,999
            Genes (RNA)                       :: 69
            rRNAs                             :: 2, 1 (5S, 16S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            tRNAs                             :: 63
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 10 of 43
            Pseudo Genes (incomplete)         :: 36 of 43
            Pseudo Genes (internal stop)      :: 2 of 43
            Pseudo Genes (multiple problems)  :: 5 of 43
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3285756
                     /organism="Ornithinimicrobium murale"
                     /mol_type="genomic DNA"
                     /strain="DSM 22056"
                     /isolation_source="cellar wall"
                     /type_material="type strain of Ornithinimicrobium murale"
                     /db_xref="taxon:1050153"
                     /geo_loc_name="Germany"
WGS         QLVD01000001-QLVD01000033
WGS_SCAFLD  NZ_QLVD01000001-NZ_QLVD01000033
//
LOCUS       NZ_BDMA01000000      6252485 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Metapseudomonas resinovorans strain MO-1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_BDMA00000000
VERSION     NZ_BDMA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMD00071031
            Sequence Read Archive: DRR083542
            Assembly: GCF_002003485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Metapseudomonas resinovorans
  ORGANISM  Metapseudomonas resinovorans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Metapseudomonas.
REFERENCE   1
  AUTHORS   Matsushita,S., Nakano,M., Aoi,Y., Kindaichi,T., Ozaki,N. and
            Ohashi,A.
  TITLE     Draft Genome Sequence of Mn(II)-Oxidizing Pseudomonas resinovorans
            Strain MO-1
  JOURNAL   Genome Announc 6 (11), e00088-18 (2018)
   PUBMED   29545293
  REMARK    DOI:10.1128/genomeA.00088-18
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6252485)
  AUTHORS   Matsushita,S. and Ohashi,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-JAN-2017) Contact:Shuji Matsushita Graduate School of
            Engineering, Hiroshima University, Department of Civil and
            Environmental Engineering; 1-4-1, Kagamiyama, Higashihiroshima,
            Hiroshima 739-8527, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            BDMA00000000.1.
            The Metapseudomonas resinovorans whole genome shotgun (WGS) project
            has the project accession NZ_BDMA00000000.  This version of the
            project (01) has the accession number NZ_BDMA01000000, and consists
            of sequences BDMA01000001-BDMA01000122.
            Please visit our website
            URL: http://www.civil-hu.jp/sanitary/
            
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Platanas v. 1.2.4
            Genome Coverage       :: 350x
            Sequencing Technology :: Illumina Hiseq2500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002003485.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:16:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,745
            CDSs (total)                      :: 5,677
            Genes (coding)                    :: 5,603
            CDSs (with protein)               :: 5,603
            Genes (RNA)                       :: 68
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 74
            CDSs (without protein)            :: 74
            Pseudo Genes (ambiguous residues) :: 0 of 74
            Pseudo Genes (frameshifted)       :: 23 of 74
            Pseudo Genes (incomplete)         :: 65 of 74
            Pseudo Genes (internal stop)      :: 5 of 74
            Pseudo Genes (multiple problems)  :: 16 of 74
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6252485
                     /organism="Metapseudomonas resinovorans"
                     /mol_type="genomic DNA"
                     /strain="MO-1"
                     /isolation_source="mud"
                     /db_xref="taxon:53412"
                     /geo_loc_name="Japan:Hiroshima, higashihiroshima,
                     Budou-ike in Hiroshima university"
                     /lat_lon="34.3989 N 132.7122 E"
                     /collection_date="2015-10-13"
WGS         BDMA01000001-BDMA01000122
WGS_SCAFLD  NZ_BDMA01000001-NZ_BDMA01000122
//
LOCUS       NZ_CDVNSX010000000   2858139 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Metallibacterium scheffleri isolate MarMAG_114999, whole
            genome shotgun sequencing project.
ACCESSION   NZ_CDVNSX000000000
VERSION     NZ_CDVNSX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737867
            Assembly: GCF_977726205.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Metallibacterium scheffleri (hypersaline lake metagenome)
  ORGANISM  Metallibacterium scheffleri
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Rhodanobacteraceae; Metallibacterium.
REFERENCE   1  (bases 1 to 2858139)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVNSX000000000.1.
            The Metallibacterium scheffleri whole genome shotgun (WGS) project
            has the project accession NZ_CDVNSX000000000.  This version of the
            project (01) has the accession number NZ_CDVNSX010000000, and
            consists of sequences CDVNSX010000001-CDVNSX010000017.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977726205.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:32:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,682
            CDSs (total)                      :: 2,634
            Genes (coding)                    :: 2,610
            CDSs (with protein)               :: 2,610
            Genes (RNA)                       :: 48
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 4 of 24
            Pseudo Genes (incomplete)         :: 21 of 24
            Pseudo Genes (internal stop)      :: 0 of 24
            Pseudo Genes (multiple problems)  :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2858139
                     /organism="Metallibacterium scheffleri"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_114999"
                     /isolation_source="Yellowstone National Park, Wyoming,
                     USA"
                     /db_xref="taxon:993689"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /metagenome_source="hypersaline lake metagenome"
                     /metagenomic
WGS         CDVNSX010000001-CDVNSX010000017
WGS_SCAFLD  NZ_CDVNSX010000001-NZ_CDVNSX010000017
//
LOCUS       NZ_CDVOFZ010000000   2913147 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Mesoflavibacter profundi isolate MarMAG_114326, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVOFZ000000000
VERSION     NZ_CDVOFZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737624
            Assembly: GCF_977729615.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Mesoflavibacter profundi (marine metagenome)
  ORGANISM  Mesoflavibacter profundi
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Mesoflavibacter.
REFERENCE   1  (bases 1 to 2913147)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVOFZ000000000.1.
            The Mesoflavibacter profundi whole genome shotgun (WGS) project has
            the project accession NZ_CDVOFZ000000000.  This version of the
            project (01) has the accession number NZ_CDVOFZ010000000, and
            consists of sequences CDVOFZ010000001-CDVOFZ010000072.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977729615.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:29:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,679
            CDSs (total)                      :: 2,645
            Genes (coding)                    :: 2,630
            CDSs (with protein)               :: 2,630
            Genes (RNA)                       :: 34
            tRNAs                             :: 30
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 15
            CDSs (without protein)            :: 15
            Pseudo Genes (ambiguous residues) :: 0 of 15
            Pseudo Genes (frameshifted)       :: 0 of 15
            Pseudo Genes (incomplete)         :: 14 of 15
            Pseudo Genes (internal stop)      :: 1 of 15
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2913147
                     /organism="Mesoflavibacter profundi"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_114326"
                     /isolation_source="Mariana Trench, particle-associated
                     microorganism hadal water (10,500 m)"
                     /db_xref="taxon:2708110"
                     /environmental_sample
                     /geo_loc_name="Pacific Ocean"
                     /collection_date="2016-09-18"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVOFZ010000001-CDVOFZ010000072
WGS_SCAFLD  NZ_CDVOFZ010000001-NZ_CDVOFZ010000072
//
LOCUS       NZ_CDUHDZ010000000   2235180 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Methanothrix soehngenii isolate MarMAG_093284, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDUHDZ000000000
VERSION     NZ_CDUHDZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120721670
            Assembly: GCF_977505945.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Methanothrix soehngenii (marine sediment metagenome)
  ORGANISM  Methanothrix soehngenii
            Archaea; Methanobacteriati; Methanobacteriota; Stenosarchaea group;
            Methanomicrobia; Methanotrichales; Methanotrichaceae; Methanothrix.
REFERENCE   1  (bases 1 to 2235180)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDUHDZ000000000.1.
            The Methanothrix soehngenii whole genome shotgun (WGS) project has
            the project accession NZ_CDUHDZ000000000.  This version of the
            project (01) has the accession number NZ_CDUHDZ010000000, and
            consists of sequences CDUHDZ010000001-CDUHDZ010000289.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977505945.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:12:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,367
            CDSs (total)                      :: 2,327
            Genes (coding)                    :: 2,272
            CDSs (with protein)               :: 2,272
            Genes (RNA)                       :: 40
            tRNAs                             :: 39
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 55
            CDSs (without protein)            :: 55
            Pseudo Genes (ambiguous residues) :: 0 of 55
            Pseudo Genes (frameshifted)       :: 3 of 55
            Pseudo Genes (incomplete)         :: 54 of 55
            Pseudo Genes (internal stop)      :: 0 of 55
            Pseudo Genes (multiple problems)  :: 2 of 55
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2235180
                     /organism="Methanothrix soehngenii"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_093284"
                     /isolation_source="coastal sea water"
                     /db_xref="taxon:2223"
                     /environmental_sample
                     /geo_loc_name="China"
                     /collection_date="2015-10-10"
                     /metagenome_source="marine sediment metagenome"
                     /metagenomic
WGS         CDUHDZ010000001-CDUHDZ010000289
WGS_SCAFLD  NZ_CDUHDZ010000001-NZ_CDUHDZ010000289
//
LOCUS       NZ_JBFWID020000000    684912 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Metamycoplasma hominis strain ZY_MH01, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBFWID000000000
VERSION     NZ_JBFWID000000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN42929155
            Assembly: GCF_046543865.2
KEYWORDS    WGS; RefSeq.
SOURCE      Metamycoplasma hominis (Mycoplasma hominis)
  ORGANISM  Metamycoplasma hominis
            Bacteria; Bacillati; Mycoplasmatota; Mycoplasmoidales;
            Metamycoplasmataceae; Metamycoplasma.
REFERENCE   1  (bases 1 to 684912)
  AUTHORS   Chen,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-MAR-2026) Respiratory Department, Zhejiang
            University, Jiefang Road, Hangzhou, Zhejiang 310016, China
REFERENCE   2  (bases 1 to 684912)
  AUTHORS   Chen,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JUL-2024) Clinical Laboratory, Zhejiang University,
            Qingchun Road, Hangzhou 310016, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBFWID000000000.2.
            
            On Mar 26, 2026 this sequence version replaced
            NZ_JBFWID000000000.1.
            The Metamycoplasma hominis whole genome shotgun (WGS) project has
            the project accession NZ_JBFWID000000000.  This version of the
            project (02) has the accession number NZ_JBFWID020000000, and
            consists of sequence JBFWID020000001.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 2025.5.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_046543865.2-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:24:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 616
            CDSs (total)                      :: 574
            Genes (coding)                    :: 571
            CDSs (with protein)               :: 571
            Genes (RNA)                       :: 42
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 1 of 3
            Pseudo Genes (incomplete)         :: 3 of 3
            Pseudo Genes (internal stop)      :: 0 of 3
            Pseudo Genes (multiple problems)  :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..684912
                     /organism="Metamycoplasma hominis"
                     /mol_type="genomic DNA"
                     /strain="ZY_MH01"
                     /isolation_source="pleural effusion"
                     /host="Homo sapiens"
                     /db_xref="taxon:2098"
                     /geo_loc_name="China"
                     /lat_lon="30.3 N 120.2 E"
                     /collection_date="2024-04"
                     /collected_by="hangfei chen"
WGS         JBFWID020000001
WGS_SCAFLD  NZ_CM149648
//
LOCUS       NZ_JBTKYM010000000   3737897 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Microbacterium foliorum strain 48, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTKYM000000000
VERSION     NZ_JBTKYM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54439458
            Assembly: GCF_056172095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Microbacterium foliorum
  ORGANISM  Microbacterium foliorum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (bases 1 to 3737897)
  AUTHORS   Guan,H., Qiu,Y., Guan,M., Quan,S., Liu,S., Chen,Y., Li,H., Yu,H.,
            Fang,L. and Huo,Z.
  TITLE     Isolation of a Protease Producing Microbacterium From the
            Intestinal Tract of Ruditapes philippinarum and Its Probiotic
            Effects
  JOURNAL   Aquac Nutr 2026 (1) (2026)
  REMARK    DOI: 10.1155/anu/8865049
REFERENCE   2  (bases 1 to 3737897)
  AUTHORS   Guan,H. and Qiu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JAN-2026) College of Fisheries and Life Science,
            Dalian Ocean University, Heishijiao street, Dalian, Liaoning
            116023, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTKYM000000000.1.
            The Microbacterium foliorum whole genome shotgun (WGS) project has
            the project accession NZ_JBTKYM000000000.  This version of the
            project (01) has the accession number NZ_JBTKYM010000000, and
            consists of sequence JBTKYM010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Dalian Ocean University,
            Engineering Research Center of Shellfish Culture and Breeding in
            Liaoning.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2025
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 620.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172095.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:56:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,641
            CDSs (total)                      :: 3,586
            Genes (coding)                    :: 3,579
            CDSs (with protein)               :: 3,579
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 4 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3737897
                     /organism="Microbacterium foliorum"
                     /mol_type="genomic DNA"
                     /strain="48"
                     /host="Ruditapes philippinarum"
                     /db_xref="taxon:104336"
                     /geo_loc_name="China: Liaoning,Dalian"
                     /collection_date="2023-04"
WGS         JBTKYM010000001
WGS_SCAFLD  NZ_CM149649
//
LOCUS       NZ_JBJKBP010000000   4886247 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S9, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKBP000000000
VERSION     NZ_JBJKBP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026088
            Assembly: GCF_045504015.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4886247)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKBP000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJKBP000000000.  This version of the project
            (01) has the accession number NZ_JBJKBP010000000, and consists of
            sequences JBJKBP010000001-JBJKBP010000072.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045504015.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:00:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,836
            CDSs (total)                      :: 4,739
            Genes (coding)                    :: 4,582
            CDSs (with protein)               :: 4,582
            Genes (RNA)                       :: 97
            rRNAs                             :: 2, 3 (16S, 23S)
            partial rRNAs                     :: 2, 3 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 15
            Pseudo Genes (total)              :: 157
            CDSs (without protein)            :: 157
            Pseudo Genes (ambiguous residues) :: 0 of 157
            Pseudo Genes (frameshifted)       :: 42 of 157
            Pseudo Genes (incomplete)         :: 123 of 157
            Pseudo Genes (internal stop)      :: 25 of 157
            Pseudo Genes (multiple problems)  :: 30 of 157
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4886247
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S9"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Yantai"
                     /collection_date="2019-03-15"
WGS         JBJKBP010000001-JBJKBP010000072
WGS_SCAFLD  NZ_JBJKBP010000001-NZ_JBJKBP010000072
//
LOCUS       NZ_JBJKIQ010000000   4752985 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S23, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKIQ000000000
VERSION     NZ_JBJKIQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026096
            Assembly: GCF_045504935.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4752985)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKIQ000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJKIQ000000000.  This version of the project
            (01) has the accession number NZ_JBJKIQ010000000, and consists of
            sequences JBJKIQ010000001-JBJKIQ010000040.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Chicken.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045504935.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:18:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,709
            CDSs (total)                      :: 4,615
            Genes (coding)                    :: 4,420
            CDSs (with protein)               :: 4,420
            Genes (RNA)                       :: 94
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 76
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 195
            CDSs (without protein)            :: 195
            Pseudo Genes (ambiguous residues) :: 0 of 195
            Pseudo Genes (frameshifted)       :: 72 of 195
            Pseudo Genes (incomplete)         :: 139 of 195
            Pseudo Genes (internal stop)      :: 32 of 195
            Pseudo Genes (multiple problems)  :: 43 of 195
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4752985
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S23"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Liaocheng"
                     /collection_date="2020-07-01"
WGS         JBJKIQ010000001-JBJKIQ010000040
WGS_SCAFLD  NZ_JBJKIQ010000001-NZ_JBJKIQ010000040
//
LOCUS       NZ_JBJLLL010000000   4757306 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S177, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLLL000000000
VERSION     NZ_JBJLLL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026133
            Assembly: GCF_045569275.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4757306)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLLL000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJLLL000000000.  This version of the project
            (01) has the accession number NZ_JBJLLL010000000, and consists of
            sequences JBJLLL010000001-JBJLLL010000048.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Chicken.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045569275.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:31:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,721
            CDSs (total)                      :: 4,627
            Genes (coding)                    :: 4,425
            CDSs (with protein)               :: 4,425
            Genes (RNA)                       :: 94
            rRNAs                             :: 2, 3 (16S, 23S)
            partial rRNAs                     :: 2, 3 (16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 202
            CDSs (without protein)            :: 202
            Pseudo Genes (ambiguous residues) :: 0 of 202
            Pseudo Genes (frameshifted)       :: 76 of 202
            Pseudo Genes (incomplete)         :: 138 of 202
            Pseudo Genes (internal stop)      :: 35 of 202
            Pseudo Genes (multiple problems)  :: 42 of 202
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4757306
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S177"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Weifang"
                     /collection_date="2022-04-13"
WGS         JBJLLL010000001-JBJLLL010000048
WGS_SCAFLD  NZ_JBJLLL010000001-NZ_JBJLLL010000048
//
LOCUS       NZ_JBJLLA010000000   4743870 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S86, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLLA000000000
VERSION     NZ_JBJLLA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026122
            Assembly: GCF_045569695.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4743870)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLLA000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJLLA000000000.  This version of the project
            (01) has the accession number NZ_JBJLLA010000000, and consists of
            sequences JBJLLA010000001-JBJLLA010000035.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Chicken.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045569695.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:17:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,686
            CDSs (total)                      :: 4,595
            Genes (coding)                    :: 4,401
            CDSs (with protein)               :: 4,401
            Genes (RNA)                       :: 91
            rRNAs                             :: 1, 2 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 74
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 194
            CDSs (without protein)            :: 194
            Pseudo Genes (ambiguous residues) :: 0 of 194
            Pseudo Genes (frameshifted)       :: 75 of 194
            Pseudo Genes (incomplete)         :: 135 of 194
            Pseudo Genes (internal stop)      :: 32 of 194
            Pseudo Genes (multiple problems)  :: 43 of 194
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4743870
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S86"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Liaocheng"
                     /collection_date="2021-04-15"
WGS         JBJLLA010000001-JBJLLA010000035
WGS_SCAFLD  NZ_JBJLLA010000001-NZ_JBJLLA010000035
//
LOCUS       NZ_JBJKBK010000000   4726919 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S4, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKBK000000000
VERSION     NZ_JBJKBK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026083
            Assembly: GCF_045504075.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4726919)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKBK000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJKBK000000000.  This version of the project
            (01) has the accession number NZ_JBJKBK010000000, and consists of
            sequences JBJKBK010000001-JBJKBK010000042.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045504075.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:00:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,669
            CDSs (total)                      :: 4,575
            Genes (coding)                    :: 4,381
            CDSs (with protein)               :: 4,381
            Genes (RNA)                       :: 94
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 76
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 194
            CDSs (without protein)            :: 194
            Pseudo Genes (ambiguous residues) :: 0 of 194
            Pseudo Genes (frameshifted)       :: 71 of 194
            Pseudo Genes (incomplete)         :: 138 of 194
            Pseudo Genes (internal stop)      :: 33 of 194
            Pseudo Genes (multiple problems)  :: 43 of 194
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4726919
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S4"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Liaocheng"
                     /collection_date="2019-03-03"
WGS         JBJKBK010000001-JBJKBK010000042
WGS_SCAFLD  NZ_JBJKBK010000001-NZ_JBJKBK010000042
//
LOCUS       NZ_JBJKIT010000000   4900859 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S39, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKIT000000000
VERSION     NZ_JBJKIT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026099
            Assembly: GCF_045504925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4900859)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKIT000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJKIT000000000.  This version of the project
            (01) has the accession number NZ_JBJKIT010000000, and consists of
            sequences JBJKIT010000001-JBJKIT010000124.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Duck.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045504925.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:14:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,895
            CDSs (total)                      :: 4,802
            Genes (coding)                    :: 4,596
            CDSs (with protein)               :: 4,596
            Genes (RNA)                       :: 93
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 3 (16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 206
            CDSs (without protein)            :: 206
            Pseudo Genes (ambiguous residues) :: 0 of 206
            Pseudo Genes (frameshifted)       :: 70 of 206
            Pseudo Genes (incomplete)         :: 140 of 206
            Pseudo Genes (internal stop)      :: 30 of 206
            Pseudo Genes (multiple problems)  :: 32 of 206
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4900859
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S39"
                     /host="duck"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Liaocheng"
                     /collection_date="2020-12-14"
WGS         JBJKIT010000001-JBJKIT010000124
WGS_SCAFLD  NZ_JBJKIT010000001-NZ_JBJKIT010000124
//
LOCUS       NZ_JBJLLJ010000000   4757339 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S175, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLLJ000000000
VERSION     NZ_JBJLLJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026131
            Assembly: GCF_045569215.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4757339)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLLJ000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJLLJ000000000.  This version of the project
            (01) has the accession number NZ_JBJLLJ010000000, and consists of
            sequences JBJLLJ010000001-JBJLLJ010000046.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Duck.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045569215.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:35:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,717
            CDSs (total)                      :: 4,624
            Genes (coding)                    :: 4,426
            CDSs (with protein)               :: 4,426
            Genes (RNA)                       :: 93
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 75
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 72 of 198
            Pseudo Genes (incomplete)         :: 138 of 198
            Pseudo Genes (internal stop)      :: 35 of 198
            Pseudo Genes (multiple problems)  :: 42 of 198
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4757339
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S175"
                     /host="duck"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Liaocheng"
                     /collection_date="2022-03-18"
WGS         JBJLLJ010000001-JBJLLJ010000046
WGS_SCAFLD  NZ_JBJLLJ010000001-NZ_JBJLLJ010000046
//
LOCUS       NZ_JBIRAD010000000   3935245 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Proteus vulgaris strain BTF15T2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIRAD000000000
VERSION     NZ_JBIRAD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44467135
            Assembly: GCF_056153985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Proteus vulgaris
  ORGANISM  Proteus vulgaris
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Proteus.
REFERENCE   1  (bases 1 to 3935245)
  AUTHORS   Reasoner,S.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JAN-2025) Department of Pathology, Microbiology and
            Immunology, Vanderbilt University Medical Center, 1211 21st Avenue
            South, Nashville, TN 37212, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIRAD000000000.1.
            The Proteus vulgaris whole genome shotgun (WGS) project has the
            project accession NZ_JBIRAD000000000.  This version of the project
            (01) has the accession number NZ_JBIRAD010000000, and consists of
            sequences JBIRAD010000001-JBIRAD010000030.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 138x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056153985.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:52:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,661
            CDSs (total)                      :: 3,579
            Genes (coding)                    :: 3,535
            CDSs (with protein)               :: 3,535
            Genes (RNA)                       :: 82
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 74
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 44
            CDSs (without protein)            :: 44
            Pseudo Genes (ambiguous residues) :: 0 of 44
            Pseudo Genes (frameshifted)       :: 15 of 44
            Pseudo Genes (incomplete)         :: 29 of 44
            Pseudo Genes (internal stop)      :: 11 of 44
            Pseudo Genes (multiple problems)  :: 10 of 44
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3935245
                     /organism="Proteus vulgaris"
                     /mol_type="genomic DNA"
                     /strain="BTF15T2"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:585"
                     /geo_loc_name="USA: Nashville, TN"
                     /lat_lon="36.1424 N 86.8014 W"
                     /collection_date="2024-08"
                     /collected_by="VUMC Urology"
WGS         JBIRAD010000001-JBIRAD010000030
WGS_SCAFLD  NZ_JBIRAD010000001-NZ_JBIRAD010000030
//
LOCUS       NZ_JBSWVK010000000   4469231 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Rossellomorea sp. ABR4_012, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWVK000000000
VERSION     NZ_JBSWVK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861978
            Assembly: GCF_056159545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Rossellomorea sp. ABR4_012
  ORGANISM  Rossellomorea sp. ABR4_012
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Rossellomorea.
REFERENCE   1  (bases 1 to 4469231)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWVK000000000.1.
            The Rossellomorea sp. ABR4_012 whole genome shotgun (WGS) project
            has the project accession NZ_JBSWVK000000000.  This version of the
            project (01) has the accession number NZ_JBSWVK010000000, and
            consists of sequences JBSWVK010000001-JBSWVK010000017.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 534x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056159545.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:13:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,506
            CDSs (total)                      :: 4,384
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 122
            rRNAs                             :: 8, 9, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 91
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 23 of 42
            Pseudo Genes (incomplete)         :: 16 of 42
            Pseudo Genes (internal stop)      :: 5 of 42
            Pseudo Genes (multiple problems)  :: 2 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4469231
                     /organism="Rossellomorea sp. ABR4_012"
                     /mol_type="genomic DNA"
                     /strain="ABR4_012"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477732"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWVK010000001-JBSWVK010000017
WGS_SCAFLD  NZ_JBSWVK010000001-NZ_JBSWVK010000017
//
LOCUS       NZ_JBSWUA010000000   4030109 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudoalteromonas ruthenica strain ABM4_036, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSWUA000000000
VERSION     NZ_JBSWUA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862023
            Assembly: GCF_056158825.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudoalteromonas ruthenica
  ORGANISM  Pseudoalteromonas ruthenica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.
REFERENCE   1  (bases 1 to 4030109)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWUA000000000.1.
            The Pseudoalteromonas ruthenica whole genome shotgun (WGS) project
            has the project accession NZ_JBSWUA000000000.  This version of the
            project (01) has the accession number NZ_JBSWUA010000000, and
            consists of sequences JBSWUA010000001-JBSWUA010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 326x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056158825.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:02:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,773
            CDSs (total)                      :: 3,653
            Genes (coding)                    :: 3,640
            CDSs (with protein)               :: 3,640
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 94
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 2 of 13
            Pseudo Genes (incomplete)         :: 11 of 13
            Pseudo Genes (internal stop)      :: 0 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4030109
                     /organism="Pseudoalteromonas ruthenica"
                     /mol_type="genomic DNA"
                     /strain="ABM4_036"
                     /isolation_source="Marine"
                     /db_xref="taxon:151081"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWUA010000001-JBSWUA010000002
WGS_SCAFLD  NZ_JBSWUA010000001-NZ_JBSWUA010000002
//
LOCUS       NZ_JBSWTY010000000   4031491 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudoalteromonas ruthenica strain ABM4_041, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSWTY000000000
VERSION     NZ_JBSWTY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862025
            Assembly: GCF_056158785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudoalteromonas ruthenica
  ORGANISM  Pseudoalteromonas ruthenica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.
REFERENCE   1  (bases 1 to 4031491)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWTY000000000.1.
            The Pseudoalteromonas ruthenica whole genome shotgun (WGS) project
            has the project accession NZ_JBSWTY000000000.  This version of the
            project (01) has the accession number NZ_JBSWTY010000000, and
            consists of sequences JBSWTY010000001-JBSWTY010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 313x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056158785.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:03:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,774
            CDSs (total)                      :: 3,651
            Genes (coding)                    :: 3,638
            CDSs (with protein)               :: 3,638
            Genes (RNA)                       :: 123
            rRNAs                             :: 10, 7, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 10, 7, 7 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 94
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 3 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 0 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4031491
                     /organism="Pseudoalteromonas ruthenica"
                     /mol_type="genomic DNA"
                     /strain="ABM4_041"
                     /isolation_source="Marine"
                     /db_xref="taxon:151081"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWTY010000001-JBSWTY010000002
WGS_SCAFLD  NZ_JBSWTY010000001-NZ_JBSWTY010000002
//
LOCUS       NZ_JBVTUB010000000   2967760 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Psychrobacter sp. TS_SC_6, whole genome shotgun sequencing project.
ACCESSION   NZ_JBVTUB000000000
VERSION     NZ_JBVTUB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52392038
            Assembly: GCF_056156305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Psychrobacter sp. TS_SC_6
  ORGANISM  Psychrobacter sp. TS_SC_6
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Psychrobacter.
REFERENCE   1  (bases 1 to 2967760)
  AUTHORS   Chatterjee,S., Dutta,S. and Ghosh,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-JAN-2026) Department of Biological Sciences, Bose
            Institute, Salt Lake, EN Block, Sector V, Kolkata 700091, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBVTUB000000000.1.
            The Psychrobacter sp. TS_SC_6 whole genome shotgun (WGS) project
            has the project accession NZ_JBVTUB000000000.  This version of the
            project (01) has the accession number NZ_JBVTUB010000000, and
            consists of sequences JBVTUB010000001-JBVTUB010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.5.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 1542.82x
            Sequencing Technology  :: Illumina; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056156305.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:31:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,526
            CDSs (total)                      :: 2,458
            Genes (coding)                    :: 2,419
            CDSs (with protein)               :: 2,419
            Genes (RNA)                       :: 68
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 11 of 39
            Pseudo Genes (incomplete)         :: 29 of 39
            Pseudo Genes (internal stop)      :: 9 of 39
            Pseudo Genes (multiple problems)  :: 7 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2967760
                     /organism="Psychrobacter sp. TS_SC_6"
                     /mol_type="genomic DNA"
                     /strain="TS_SC_6"
                     /isolation_source="TsoMoriri Lake Sediment"
                     /db_xref="taxon:3469946"
                     /geo_loc_name="India: TsoMoriri Lake, Ladakh"
                     /collection_date="2021-10-28"
WGS         JBVTUB010000001-JBVTUB010000004
WGS_SCAFLD  NZ_CM149590
WGS_SCAFLD  NZ_JBVTUB010000002-NZ_JBVTUB010000004
//
LOCUS       NZ_JBIRAT010000000   4419584 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Providencia rettgeri strain BTF15T-2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIRAT000000000
VERSION     NZ_JBIRAT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44467151
            Assembly: GCF_056153685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Providencia rettgeri
  ORGANISM  Providencia rettgeri
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Providencia.
REFERENCE   1  (bases 1 to 4419584)
  AUTHORS   Reasoner,S.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JAN-2025) Department of Pathology, Microbiology and
            Immunology, Vanderbilt University Medical Center, 1211 21st Avenue
            South, Nashville, TN 37212, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIRAT000000000.1.
            The Providencia rettgeri whole genome shotgun (WGS) project has the
            project accession NZ_JBIRAT000000000.  This version of the project
            (01) has the accession number NZ_JBIRAT010000000, and consists of
            sequences JBIRAT010000001-JBIRAT010000028.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 148x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056153685.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:57:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,082
            CDSs (total)                      :: 4,001
            Genes (coding)                    :: 3,960
            CDSs (with protein)               :: 3,960
            Genes (RNA)                       :: 81
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 72
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 41
            CDSs (without protein)            :: 41
            Pseudo Genes (ambiguous residues) :: 0 of 41
            Pseudo Genes (frameshifted)       :: 13 of 41
            Pseudo Genes (incomplete)         :: 33 of 41
            Pseudo Genes (internal stop)      :: 6 of 41
            Pseudo Genes (multiple problems)  :: 10 of 41
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4419584
                     /organism="Providencia rettgeri"
                     /mol_type="genomic DNA"
                     /strain="BTF15T-2"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:587"
                     /geo_loc_name="USA: Nashville, TN"
                     /lat_lon="36.1424 N 86.8014 W"
                     /collection_date="2021-05"
                     /collected_by="VUMC Urology"
WGS         JBIRAT010000001-JBIRAT010000028
WGS_SCAFLD  NZ_JBIRAT010000001-NZ_JBIRAT010000028
//
LOCUS       NZ_JBSWTW010000000   4030109 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudoalteromonas ruthenica strain ABM4_063, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSWTW000000000
VERSION     NZ_JBSWTW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862027
            Assembly: GCF_056158745.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudoalteromonas ruthenica
  ORGANISM  Pseudoalteromonas ruthenica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.
REFERENCE   1  (bases 1 to 4030109)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWTW000000000.1.
            The Pseudoalteromonas ruthenica whole genome shotgun (WGS) project
            has the project accession NZ_JBSWTW000000000.  This version of the
            project (01) has the accession number NZ_JBSWTW010000000, and
            consists of sequences JBSWTW010000001-JBSWTW010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 403x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056158745.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:01:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,777
            CDSs (total)                      :: 3,657
            Genes (coding)                    :: 3,643
            CDSs (with protein)               :: 3,643
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 94
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 14
            CDSs (without protein)            :: 14
            Pseudo Genes (ambiguous residues) :: 0 of 14
            Pseudo Genes (frameshifted)       :: 3 of 14
            Pseudo Genes (incomplete)         :: 11 of 14
            Pseudo Genes (internal stop)      :: 0 of 14
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4030109
                     /organism="Pseudoalteromonas ruthenica"
                     /mol_type="genomic DNA"
                     /strain="ABM4_063"
                     /isolation_source="Marine"
                     /db_xref="taxon:151081"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-07-26"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWTW010000001-JBSWTW010000002
WGS_SCAFLD  NZ_JBSWTW010000001-NZ_JBSWTW010000002
//
LOCUS       NZ_JBSWTZ010000000   4030099 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudoalteromonas ruthenica strain ABM4_039, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSWTZ000000000
VERSION     NZ_JBSWTZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862024
            Assembly: GCF_056158805.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudoalteromonas ruthenica
  ORGANISM  Pseudoalteromonas ruthenica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.
REFERENCE   1  (bases 1 to 4030099)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWTZ000000000.1.
            The Pseudoalteromonas ruthenica whole genome shotgun (WGS) project
            has the project accession NZ_JBSWTZ000000000.  This version of the
            project (01) has the accession number NZ_JBSWTZ010000000, and
            consists of sequences JBSWTZ010000001-JBSWTZ010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 415x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056158805.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:03:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,769
            CDSs (total)                      :: 3,649
            Genes (coding)                    :: 3,636
            CDSs (with protein)               :: 3,636
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 94
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 3 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 0 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4030099
                     /organism="Pseudoalteromonas ruthenica"
                     /mol_type="genomic DNA"
                     /strain="ABM4_039"
                     /isolation_source="Marine"
                     /db_xref="taxon:151081"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWTZ010000001-JBSWTZ010000002
WGS_SCAFLD  NZ_JBSWTZ010000001-NZ_JBSWTZ010000002
//
LOCUS       NZ_JBSWSW010000000   5260681 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Roseivirga sp. AWQ4_251, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWSW000000000
VERSION     NZ_JBSWSW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862054
            Assembly: GCF_056158225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Roseivirga sp. AWQ4_251
  ORGANISM  Roseivirga sp. AWQ4_251
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Roseivirgaceae; Roseivirga.
REFERENCE   1  (bases 1 to 5260681)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWSW000000000.1.
            The Roseivirga sp. AWQ4_251 whole genome shotgun (WGS) project has
            the project accession NZ_JBSWSW000000000.  This version of the
            project (01) has the accession number NZ_JBSWSW010000000, and
            consists of sequences JBSWSW010000001-JBSWSW010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 584x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056158225.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:04:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,597
            CDSs (total)                      :: 4,552
            Genes (coding)                    :: 4,529
            CDSs (with protein)               :: 4,529
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 23
            CDSs (without protein)            :: 23
            Pseudo Genes (ambiguous residues) :: 0 of 23
            Pseudo Genes (frameshifted)       :: 13 of 23
            Pseudo Genes (incomplete)         :: 2 of 23
            Pseudo Genes (internal stop)      :: 8 of 23
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5260681
                     /organism="Roseivirga sp. AWQ4_251"
                     /mol_type="genomic DNA"
                     /strain="AWQ4_251"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477690"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-10-31"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWSW010000001-JBSWSW010000002
WGS_SCAFLD  NZ_JBSWSW010000001-NZ_JBSWSW010000002
//
LOCUS       NZ_JBSWVM010000000   4636250 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Rossellomorea sp. ABR4_004, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWVM000000000
VERSION     NZ_JBSWVM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861976
            Assembly: GCF_056159585.1
KEYWORDS    WGS; RefSeq.
SOURCE      Rossellomorea sp. ABR4_004
  ORGANISM  Rossellomorea sp. ABR4_004
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Rossellomorea.
REFERENCE   1  (bases 1 to 4636250)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWVM000000000.1.
            The Rossellomorea sp. ABR4_004 whole genome shotgun (WGS) project
            has the project accession NZ_JBSWVM000000000.  This version of the
            project (01) has the accession number NZ_JBSWVM010000000, and
            consists of sequences JBSWVM010000001-JBSWVM010000021.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 504x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056159585.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:20:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,704
            CDSs (total)                      :: 4,558
            Genes (coding)                    :: 4,524
            CDSs (with protein)               :: 4,524
            Genes (RNA)                       :: 146
            rRNAs                             :: 11, 10, 11 (5S, 16S, 23S)
            complete rRNAs                    :: 11, 9, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 109
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 12 of 34
            Pseudo Genes (incomplete)         :: 16 of 34
            Pseudo Genes (internal stop)      :: 7 of 34
            Pseudo Genes (multiple problems)  :: 1 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4636250
                     /organism="Rossellomorea sp. ABR4_004"
                     /mol_type="genomic DNA"
                     /strain="ABR4_004"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477733"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWVM010000001-JBSWVM010000021
WGS_SCAFLD  NZ_JBSWVM010000001-NZ_JBSWVM010000021
//
LOCUS       NZ_JBSWUD010000000   3542635 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salinivibrio proteolyticus strain ABH4_079, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSWUD000000000
VERSION     NZ_JBSWUD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862017
            Assembly: GCF_056158905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salinivibrio proteolyticus
  ORGANISM  Salinivibrio proteolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Salinivibrio.
REFERENCE   1  (bases 1 to 3542635)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWUD000000000.1.
            The Salinivibrio proteolyticus whole genome shotgun (WGS) project
            has the project accession NZ_JBSWUD000000000.  This version of the
            project (01) has the accession number NZ_JBSWUD010000000, and
            consists of sequences JBSWUD010000001-JBSWUD010000003.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 402x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056158905.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:06:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,280
            CDSs (total)                      :: 3,155
            Genes (coding)                    :: 3,115
            CDSs (with protein)               :: 3,115
            Genes (RNA)                       :: 125
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 96
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 40
            CDSs (without protein)            :: 40
            Pseudo Genes (ambiguous residues) :: 0 of 40
            Pseudo Genes (frameshifted)       :: 10 of 40
            Pseudo Genes (incomplete)         :: 32 of 40
            Pseudo Genes (internal stop)      :: 6 of 40
            Pseudo Genes (multiple problems)  :: 7 of 40
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3542635
                     /organism="Salinivibrio proteolyticus"
                     /mol_type="genomic DNA"
                     /strain="ABH4_079"
                     /isolation_source="Marine"
                     /db_xref="taxon:334715"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-07-26"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWUD010000001-JBSWUD010000003
WGS_SCAFLD  NZ_JBSWUD010000001-NZ_JBSWUD010000003
//
LOCUS       NZ_JBSWWB010000000   3766847 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Ruegeria arenilitoris strain ABH4_020, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSWWB000000000
VERSION     NZ_JBSWWB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861960
            Assembly: GCF_056159845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ruegeria arenilitoris
  ORGANISM  Ruegeria arenilitoris
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Ruegeria.
REFERENCE   1  (bases 1 to 3766847)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWWB000000000.1.
            The Ruegeria arenilitoris whole genome shotgun (WGS) project has
            the project accession NZ_JBSWWB000000000.  This version of the
            project (01) has the accession number NZ_JBSWWB010000000, and
            consists of sequences JBSWWB010000001-JBSWWB010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 611x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056159845.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:22:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,744
            CDSs (total)                      :: 3,681
            Genes (coding)                    :: 3,672
            CDSs (with protein)               :: 3,672
            Genes (RNA)                       :: 63
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 3 of 9
            Pseudo Genes (incomplete)         :: 6 of 9
            Pseudo Genes (internal stop)      :: 1 of 9
            Pseudo Genes (multiple problems)  :: 1 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3766847
                     /organism="Ruegeria arenilitoris"
                     /mol_type="genomic DNA"
                     /strain="ABH4_020"
                     /isolation_source="Marine"
                     /db_xref="taxon:1173585"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWWB010000001-JBSWWB010000002
WGS_SCAFLD  NZ_JBSWWB010000001-NZ_JBSWWB010000002
//
LOCUS       NZ_JBIRAJ010000000   6493645 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain BTF58T-1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIRAJ000000000
VERSION     NZ_JBIRAJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44467141
            Assembly: GCF_056153885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6493645)
  AUTHORS   Reasoner,S.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JAN-2025) Department of Pathology, Microbiology and
            Immunology, Vanderbilt University Medical Center, 1211 21st Avenue
            South, Nashville, TN 37212, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIRAJ000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JBIRAJ000000000.  This version of the
            project (01) has the accession number NZ_JBIRAJ010000000, and
            consists of sequences JBIRAJ010000001-JBIRAJ010000055.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056153885.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:21:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,143
            CDSs (total)                      :: 6,077
            Genes (coding)                    :: 6,001
            CDSs (with protein)               :: 6,001
            Genes (RNA)                       :: 66
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 58
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 19 of 77
            Pseudo Genes (incomplete)         :: 64 of 77
            Pseudo Genes (internal stop)      :: 8 of 77
            Pseudo Genes (multiple problems)  :: 14 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6493645
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="BTF58T-1"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="USA: Nashville, TN"
                     /lat_lon="36.1424 N 86.8014 W"
                     /collection_date="2023-06"
                     /collected_by="VUMC Urology"
WGS         JBIRAJ010000001-JBIRAJ010000055
WGS_SCAFLD  NZ_JBIRAJ010000001-NZ_JBIRAJ010000055
//
LOCUS       NZ_JBSWUW010000000   3892924 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Saccharospirillum sp. ABV4_185, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWUW000000000
VERSION     NZ_JBSWUW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861995
            Assembly: GCF_056159245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Saccharospirillum sp. ABV4_185
  ORGANISM  Saccharospirillum sp. ABV4_185
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Saccharospirillaceae; Saccharospirillum.
REFERENCE   1  (bases 1 to 3892924)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWUW000000000.1.
            The Saccharospirillum sp. ABV4_185 whole genome shotgun (WGS)
            project has the project accession NZ_JBSWUW000000000.  This version
            of the project (01) has the accession number NZ_JBSWUW010000000,
            and consists of sequences JBSWUW010000001-JBSWUW010000003.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1128x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056159245.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:11:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,710
            CDSs (total)                      :: 3,640
            Genes (coding)                    :: 3,627
            CDSs (with protein)               :: 3,627
            Genes (RNA)                       :: 70
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 2 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 2 of 13
            Pseudo Genes (multiple problems)  :: 1 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3892924
                     /organism="Saccharospirillum sp. ABV4_185"
                     /mol_type="genomic DNA"
                     /strain="ABV4_185"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477724"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-07-26"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWUW010000001-JBSWUW010000003
WGS_SCAFLD  NZ_JBSWUW010000001-NZ_JBSWUW010000003
//
LOCUS       NZ_JBSWXI010000000   4171065 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Rheinheimera sp. ABH4_548, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWXI000000000
VERSION     NZ_JBSWXI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861924
            Assembly: GCF_056160525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Rheinheimera sp. ABH4_548
  ORGANISM  Rheinheimera sp. ABH4_548
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Chromatiales; Chromatiaceae; Rheinheimera.
REFERENCE   1  (bases 1 to 4171065)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWXI000000000.1.
            The Rheinheimera sp. ABH4_548 whole genome shotgun (WGS) project
            has the project accession NZ_JBSWXI000000000.  This version of the
            project (01) has the accession number NZ_JBSWXI010000000, and
            consists of sequences JBSWXI010000001-JBSWXI010000026.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 307x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056160525.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:33:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,901
            CDSs (total)                      :: 3,827
            Genes (coding)                    :: 3,818
            CDSs (with protein)               :: 3,818
            Genes (RNA)                       :: 74
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 0 of 9
            Pseudo Genes (incomplete)         :: 8 of 9
            Pseudo Genes (internal stop)      :: 1 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4171065
                     /organism="Rheinheimera sp. ABH4_548"
                     /mol_type="genomic DNA"
                     /strain="ABH4_548"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477755"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2024-02-27"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWXI010000001-JBSWXI010000026
WGS_SCAFLD  NZ_JBSWXI010000001-NZ_JBSWXI010000026
//
LOCUS       NZ_JBSWTO010000000   3555190 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salinivibrio proteolyticus strain ABN3_029, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSWTO000000000
VERSION     NZ_JBSWTO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862035
            Assembly: GCF_056158585.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salinivibrio proteolyticus
  ORGANISM  Salinivibrio proteolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Salinivibrio.
REFERENCE   1  (bases 1 to 3555190)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWTO000000000.1.
            The Salinivibrio proteolyticus whole genome shotgun (WGS) project
            has the project accession NZ_JBSWTO000000000.  This version of the
            project (01) has the accession number NZ_JBSWTO010000000, and
            consists of sequences JBSWTO010000001-JBSWTO010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 754x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056158585.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:53:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,296
            CDSs (total)                      :: 3,166
            Genes (coding)                    :: 3,125
            CDSs (with protein)               :: 3,125
            Genes (RNA)                       :: 130
            rRNAs                             :: 10, 9, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 10, 9, 9 (5S, 16S, 23S)
            tRNAs                             :: 98
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 41
            CDSs (without protein)            :: 41
            Pseudo Genes (ambiguous residues) :: 0 of 41
            Pseudo Genes (frameshifted)       :: 13 of 41
            Pseudo Genes (incomplete)         :: 31 of 41
            Pseudo Genes (internal stop)      :: 6 of 41
            Pseudo Genes (multiple problems)  :: 8 of 41
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3555190
                     /organism="Salinivibrio proteolyticus"
                     /mol_type="genomic DNA"
                     /strain="ABN3_029"
                     /isolation_source="Marine"
                     /db_xref="taxon:334715"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-07-26"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWTO010000001-JBSWTO010000004
WGS_SCAFLD  NZ_JBSWTO010000001-NZ_JBSWTO010000004
//
LOCUS       NZ_JBSWXB010000000   2833446 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Qipengyuania flava strain ABV3_043, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWXB000000000
VERSION     NZ_JBSWXB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861931
            Assembly: GCF_056160385.1
KEYWORDS    WGS; RefSeq.
SOURCE      Qipengyuania flava
  ORGANISM  Qipengyuania flava
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Qipengyuania.
REFERENCE   1  (bases 1 to 2833446)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWXB000000000.1.
            The Qipengyuania flava whole genome shotgun (WGS) project has the
            project accession NZ_JBSWXB000000000.  This version of the project
            (01) has the accession number NZ_JBSWXB010000000, and consists of
            sequences JBSWXB010000001-JBSWXB010000012.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 581x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056160385.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:34:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,791
            CDSs (total)                      :: 2,735
            Genes (coding)                    :: 2,726
            CDSs (with protein)               :: 2,726
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 1 of 9
            Pseudo Genes (incomplete)         :: 7 of 9
            Pseudo Genes (internal stop)      :: 2 of 9
            Pseudo Genes (multiple problems)  :: 1 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2833446
                     /organism="Qipengyuania flava"
                     /mol_type="genomic DNA"
                     /strain="ABV3_043"
                     /isolation_source="Marine"
                     /db_xref="taxon:192812"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-11-21"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWXB010000001-JBSWXB010000012
WGS_SCAFLD  NZ_JBSWXB010000001-NZ_JBSWXB010000012
//
LOCUS       NZ_JBSWVB010000000   4679151 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudoalteromonas sp. ABV4_021, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWVB000000000
VERSION     NZ_JBSWVB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861987
            Assembly: GCF_056159365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudoalteromonas sp. ABV4_021
  ORGANISM  Pseudoalteromonas sp. ABV4_021
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.
REFERENCE   1  (bases 1 to 4679151)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWVB000000000.1.
            The Pseudoalteromonas sp. ABV4_021 whole genome shotgun (WGS)
            project has the project accession NZ_JBSWVB000000000.  This version
            of the project (01) has the accession number NZ_JBSWVB010000000,
            and consists of sequences JBSWVB010000001-JBSWVB010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 495x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056159365.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:17:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,253
            CDSs (total)                      :: 4,131
            Genes (coding)                    :: 4,108
            CDSs (with protein)               :: 4,108
            Genes (RNA)                       :: 122
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 96
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 23
            CDSs (without protein)            :: 23
            Pseudo Genes (ambiguous residues) :: 0 of 23
            Pseudo Genes (frameshifted)       :: 8 of 23
            Pseudo Genes (incomplete)         :: 15 of 23
            Pseudo Genes (internal stop)      :: 4 of 23
            Pseudo Genes (multiple problems)  :: 3 of 23
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4679151
                     /organism="Pseudoalteromonas sp. ABV4_021"
                     /mol_type="genomic DNA"
                     /strain="ABV4_021"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477728"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWVB010000001-JBSWVB010000002
WGS_SCAFLD  NZ_JBSWVB010000001-NZ_JBSWVB010000002
//
LOCUS       NZ_JBSWVY010000000   5853109 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Rhodococcus ruber strain ABH4_050, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWVY000000000
VERSION     NZ_JBSWVY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861963
            Assembly: GCF_056159805.1
KEYWORDS    WGS; RefSeq.
SOURCE      Rhodococcus ruber
  ORGANISM  Rhodococcus ruber
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Nocardiaceae; Rhodococcus.
REFERENCE   1  (bases 1 to 5853109)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWVY000000000.1.
            The Rhodococcus ruber whole genome shotgun (WGS) project has the
            project accession NZ_JBSWVY000000000.  This version of the project
            (01) has the accession number NZ_JBSWVY010000000, and consists of
            sequences JBSWVY010000001-JBSWVY010000006.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 510x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056159805.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:43:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,482
            CDSs (total)                      :: 5,414
            Genes (coding)                    :: 5,319
            CDSs (with protein)               :: 5,319
            Genes (RNA)                       :: 68
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 95
            CDSs (without protein)            :: 95
            Pseudo Genes (ambiguous residues) :: 0 of 95
            Pseudo Genes (frameshifted)       :: 29 of 95
            Pseudo Genes (incomplete)         :: 69 of 95
            Pseudo Genes (internal stop)      :: 5 of 95
            Pseudo Genes (multiple problems)  :: 8 of 95
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5853109
                     /organism="Rhodococcus ruber"
                     /mol_type="genomic DNA"
                     /strain="ABH4_050"
                     /isolation_source="Marine"
                     /db_xref="taxon:1830"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWVY010000001-JBSWVY010000006
WGS_SCAFLD  NZ_JBSWVY010000001-NZ_JBSWVY010000006
//
LOCUS       NZ_JBSWTI010000000   4438932 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Ruegeria sp. ABV4_181, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWTI000000000
VERSION     NZ_JBSWTI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862042
            Assembly: GCF_056158465.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ruegeria sp. ABV4_181
  ORGANISM  Ruegeria sp. ABV4_181
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Ruegeria.
REFERENCE   1  (bases 1 to 4438932)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWTI000000000.1.
            The Ruegeria sp. ABV4_181 whole genome shotgun (WGS) project has
            the project accession NZ_JBSWTI000000000.  This version of the
            project (01) has the accession number NZ_JBSWTI010000000, and
            consists of sequences JBSWTI010000001-JBSWTI010000006.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 635x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056158465.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:06:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,344
            CDSs (total)                      :: 4,280
            Genes (coding)                    :: 4,243
            CDSs (with protein)               :: 4,243
            Genes (RNA)                       :: 64
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 20 of 37
            Pseudo Genes (incomplete)         :: 13 of 37
            Pseudo Genes (internal stop)      :: 10 of 37
            Pseudo Genes (multiple problems)  :: 4 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4438932
                     /organism="Ruegeria sp. ABV4_181"
                     /mol_type="genomic DNA"
                     /strain="ABV4_181"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477700"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-07-26"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWTI010000001-JBSWTI010000006
WGS_SCAFLD  NZ_JBSWTI010000001-NZ_JBSWTI010000006
//
LOCUS       NZ_JBSWSZ010000000   5775473 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudoalteromonas sp. AWM4_233, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWSZ000000000
VERSION     NZ_JBSWSZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862051
            Assembly: GCF_056158285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudoalteromonas sp. AWM4_233
  ORGANISM  Pseudoalteromonas sp. AWM4_233
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.
REFERENCE   1  (bases 1 to 5775473)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWSZ000000000.1.
            The Pseudoalteromonas sp. AWM4_233 whole genome shotgun (WGS)
            project has the project accession NZ_JBSWSZ000000000.  This version
            of the project (01) has the accession number NZ_JBSWSZ010000000,
            and consists of sequences JBSWSZ010000001-JBSWSZ010000160.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 686x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056158285.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:18:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,687
            CDSs (total)                      :: 5,524
            Genes (coding)                    :: 5,219
            CDSs (with protein)               :: 5,219
            Genes (RNA)                       :: 163
            rRNAs                             :: 10, 10, 15 (5S, 16S, 23S)
            complete rRNAs                    :: 10, 10, 9 (5S, 16S, 23S)
            partial rRNAs                     :: 6 (23S)
            tRNAs                             :: 124
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 305
            CDSs (without protein)            :: 305
            Pseudo Genes (ambiguous residues) :: 0 of 305
            Pseudo Genes (frameshifted)       :: 143 of 305
            Pseudo Genes (incomplete)         :: 181 of 305
            Pseudo Genes (internal stop)      :: 19 of 305
            Pseudo Genes (multiple problems)  :: 37 of 305
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5775473
                     /organism="Pseudoalteromonas sp. AWM4_233"
                     /mol_type="genomic DNA"
                     /strain="AWM4_233"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477692"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-10-31"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWSZ010000001-JBSWSZ010000160
WGS_SCAFLD  NZ_JBSWSZ010000001-NZ_JBSWSZ010000160
//
LOCUS       NZ_JBSWVU010000000   6689759 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Roseibium algicola strain ABL4_130, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWVU000000000
VERSION     NZ_JBSWVU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861967
            Assembly: GCF_056159725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Roseibium algicola
  ORGANISM  Roseibium algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Stappiaceae; Roseibium.
REFERENCE   1  (bases 1 to 6689759)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWVU000000000.1.
            The Roseibium algicola whole genome shotgun (WGS) project has the
            project accession NZ_JBSWVU000000000.  This version of the project
            (01) has the accession number NZ_JBSWVU010000000, and consists of
            sequences JBSWVU010000001-JBSWVU010000086.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 753x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056159725.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:42:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,172
            CDSs (total)                      :: 6,118
            Genes (coding)                    :: 6,073
            CDSs (with protein)               :: 6,073
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 45
            CDSs (without protein)            :: 45
            Pseudo Genes (ambiguous residues) :: 0 of 45
            Pseudo Genes (frameshifted)       :: 8 of 45
            Pseudo Genes (incomplete)         :: 37 of 45
            Pseudo Genes (internal stop)      :: 8 of 45
            Pseudo Genes (multiple problems)  :: 6 of 45
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6689759
                     /organism="Roseibium algicola"
                     /mol_type="genomic DNA"
                     /strain="ABL4_130"
                     /isolation_source="Marine"
                     /db_xref="taxon:2857014"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-07-26"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWVU010000001-JBSWVU010000086
WGS_SCAFLD  NZ_JBSWVU010000001-NZ_JBSWVU010000086
//
LOCUS       NZ_JBSWTP010000000   5993639 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salipiger sp. ABN3_019, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWTP000000000
VERSION     NZ_JBSWTP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862034
            Assembly: GCF_056158605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salipiger sp. ABN3_019
  ORGANISM  Salipiger sp. ABN3_019
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (bases 1 to 5993639)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWTP000000000.1.
            The Salipiger sp. ABN3_019 whole genome shotgun (WGS) project has
            the project accession NZ_JBSWTP000000000.  This version of the
            project (01) has the accession number NZ_JBSWTP010000000, and
            consists of sequences JBSWTP010000001-JBSWTP010000011.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 456x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056158605.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:15:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,670
            CDSs (total)                      :: 5,595
            Genes (coding)                    :: 5,472
            CDSs (with protein)               :: 5,472
            Genes (RNA)                       :: 75
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 54 of 123
            Pseudo Genes (incomplete)         :: 79 of 123
            Pseudo Genes (internal stop)      :: 33 of 123
            Pseudo Genes (multiple problems)  :: 33 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5993639
                     /organism="Salipiger sp. ABN3_019"
                     /mol_type="genomic DNA"
                     /strain="ABN3_019"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477705"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-07-26"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWTP010000001-JBSWTP010000011
WGS_SCAFLD  NZ_JBSWTP010000001-NZ_JBSWTP010000011
//
LOCUS       NZ_JBSWVF010000000   6330942 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomaricurvus sp. ABR4_320, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWVF000000000
VERSION     NZ_JBSWVF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861983
            Assembly: GCF_056159445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomaricurvus sp. ABR4_320
  ORGANISM  Pseudomaricurvus sp. ABR4_320
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Cellvibrionales; Cellvibrionaceae; Pseudomaricurvus.
REFERENCE   1  (bases 1 to 6330942)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWVF000000000.1.
            The Pseudomaricurvus sp. ABR4_320 whole genome shotgun (WGS)
            project has the project accession NZ_JBSWVF000000000.  This version
            of the project (01) has the accession number NZ_JBSWVF010000000,
            and consists of sequences JBSWVF010000001-JBSWVF010000145.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 517x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056159445.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:19:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,549
            CDSs (total)                      :: 5,502
            Genes (coding)                    :: 5,451
            CDSs (with protein)               :: 5,451
            Genes (RNA)                       :: 47
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 11 of 51
            Pseudo Genes (incomplete)         :: 42 of 51
            Pseudo Genes (internal stop)      :: 8 of 51
            Pseudo Genes (multiple problems)  :: 9 of 51
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6330942
                     /organism="Pseudomaricurvus sp. ABR4_320"
                     /mol_type="genomic DNA"
                     /strain="ABR4_320"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477729"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-07-26"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWVF010000001-JBSWVF010000145
WGS_SCAFLD  NZ_JBSWVF010000001-NZ_JBSWVF010000145
//
LOCUS       NZ_JBSWYH010000000   5573372 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Roseibium sp. AWQ4_254, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWYH000000000
VERSION     NZ_JBSWYH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861898
            Assembly: GCF_056161025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Roseibium sp. AWQ4_254
  ORGANISM  Roseibium sp. AWQ4_254
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Stappiaceae; Roseibium.
REFERENCE   1  (bases 1 to 5573372)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWYH000000000.1.
            The Roseibium sp. AWQ4_254 whole genome shotgun (WGS) project has
            the project accession NZ_JBSWYH000000000.  This version of the
            project (01) has the accession number NZ_JBSWYH010000000, and
            consists of sequences JBSWYH010000001-JBSWYH010000144.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 207x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161025.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:51:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,991
            CDSs (total)                      :: 4,938
            Genes (coding)                    :: 4,851
            CDSs (with protein)               :: 4,851
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 87
            CDSs (without protein)            :: 87
            Pseudo Genes (ambiguous residues) :: 0 of 87
            Pseudo Genes (frameshifted)       :: 24 of 87
            Pseudo Genes (incomplete)         :: 69 of 87
            Pseudo Genes (internal stop)      :: 12 of 87
            Pseudo Genes (multiple problems)  :: 15 of 87
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5573372
                     /organism="Roseibium sp. AWQ4_254"
                     /mol_type="genomic DNA"
                     /strain="AWQ4_254"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477773"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-10-31"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWYH010000001-JBSWYH010000144
WGS_SCAFLD  NZ_JBSWYH010000001-NZ_JBSWYH010000144
//
LOCUS       NZ_JBSWUU010000000   4606890 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Ruegeria sp. AWH4_226, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWUU000000000
VERSION     NZ_JBSWUU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861998
            Assembly: GCF_056159225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ruegeria sp. AWH4_226
  ORGANISM  Ruegeria sp. AWH4_226
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Ruegeria.
REFERENCE   1  (bases 1 to 4606890)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWUU000000000.1.
            The Ruegeria sp. AWH4_226 whole genome shotgun (WGS) project has
            the project accession NZ_JBSWUU000000000.  This version of the
            project (01) has the accession number NZ_JBSWUU010000000, and
            consists of sequences JBSWUU010000001-JBSWUU010000008.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 606x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056159225.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:12:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,548
            CDSs (total)                      :: 4,486
            Genes (coding)                    :: 4,447
            CDSs (with protein)               :: 4,447
            Genes (RNA)                       :: 62
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 10 of 39
            Pseudo Genes (incomplete)         :: 32 of 39
            Pseudo Genes (internal stop)      :: 11 of 39
            Pseudo Genes (multiple problems)  :: 12 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4606890
                     /organism="Ruegeria sp. AWH4_226"
                     /mol_type="genomic DNA"
                     /strain="AWH4_226"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477721"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-10-31"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWUU010000001-JBSWUU010000008
WGS_SCAFLD  NZ_JBSWUU010000001-NZ_JBSWUU010000008
//
LOCUS       NZ_JBSWYK010000000   5894719 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudoalteromonas luteoviolacea strain AWM4_215, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JBSWYK000000000
VERSION     NZ_JBSWYK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861895
            Assembly: GCF_056161065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudoalteromonas luteoviolacea
  ORGANISM  Pseudoalteromonas luteoviolacea
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.
REFERENCE   1  (bases 1 to 5894719)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWYK000000000.1.
            The Pseudoalteromonas luteoviolacea whole genome shotgun (WGS)
            project has the project accession NZ_JBSWYK000000000.  This version
            of the project (01) has the accession number NZ_JBSWYK010000000,
            and consists of sequences JBSWYK010000001-JBSWYK010000117.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 175x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161065.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:49:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,141
            CDSs (total)                      :: 5,010
            Genes (coding)                    :: 4,958
            CDSs (with protein)               :: 4,958
            Genes (RNA)                       :: 131
            rRNAs                             :: 4, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 117
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 10 of 52
            Pseudo Genes (incomplete)         :: 41 of 52
            Pseudo Genes (internal stop)      :: 8 of 52
            Pseudo Genes (multiple problems)  :: 6 of 52
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5894719
                     /organism="Pseudoalteromonas luteoviolacea"
                     /mol_type="genomic DNA"
                     /strain="AWM4_215"
                     /isolation_source="Marine"
                     /db_xref="taxon:43657"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-10-31"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWYK010000001-JBSWYK010000117
WGS_SCAFLD  NZ_JBSWYK010000001-NZ_JBSWYK010000117
//
LOCUS       NZ_JBSWYG010000000   5629177 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Roseibium sp. AWQ4_290, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWYG000000000
VERSION     NZ_JBSWYG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861899
            Assembly: GCF_056160985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Roseibium sp. AWQ4_290
  ORGANISM  Roseibium sp. AWQ4_290
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Stappiaceae; Roseibium.
REFERENCE   1  (bases 1 to 5629177)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWYG000000000.1.
            The Roseibium sp. AWQ4_290 whole genome shotgun (WGS) project has
            the project accession NZ_JBSWYG000000000.  This version of the
            project (01) has the accession number NZ_JBSWYG010000000, and
            consists of sequences JBSWYG010000001-JBSWYG010000145.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 227x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056160985.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:08:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,094
            CDSs (total)                      :: 5,040
            Genes (coding)                    :: 4,959
            CDSs (with protein)               :: 4,959
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 17 of 81
            Pseudo Genes (incomplete)         :: 64 of 81
            Pseudo Genes (internal stop)      :: 15 of 81
            Pseudo Genes (multiple problems)  :: 11 of 81
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5629177
                     /organism="Roseibium sp. AWQ4_290"
                     /mol_type="genomic DNA"
                     /strain="AWQ4_290"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477772"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-10-31"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWYG010000001-JBSWYG010000145
WGS_SCAFLD  NZ_JBSWYG010000001-NZ_JBSWYG010000145
//
LOCUS       NZ_NOIU01000000      3037640 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Rothia halotolerans strain JCM 31975, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NOIU00000000
VERSION     NZ_NOIU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07337062
            Assembly: GCF_004136635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Rothia halotolerans
  ORGANISM  Rothia halotolerans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Rothia.
REFERENCE   1  (bases 1 to 3037640)
  AUTHORS   Braun,M.S., Wang,E., Zimmermann,S., Boutin,S. and Wink,M.
  TITLE     Kocuria uropygioeca sp. nov. and Kocuria uropygialis sp. nov.,
            isolated from the preen glands of Great Spotted Woodpeckers
            (Dendrocopos major)
  JOURNAL   Syst Appl Microbiol 41 (1), 38-43 (2018)
   PUBMED   29169691
REFERENCE   2  (bases 1 to 3037640)
  AUTHORS   Braun,M.S., Wang,E., Zimmermann,S., Boutin,S. and Wink,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2017) Biology, Institute of Pharmacy and
            Molecular Biotechnology, Im Neuenheimer Feld 364, Heidelberg,
            Baden-Wuerttemberg 69120, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NOIU00000000.1.
            The Rothia halotolerans whole genome shotgun (WGS) project has the
            project accession NZ_NOIU00000000.  This version of the project
            (01) has the accession number NZ_NOIU01000000, and consists of
            sequences NOIU01000001-NOIU01000010.
            Bacteria available from DSMZ - DSM 18442.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 07-JUL-2017
            Assembly Method        :: SPAdes v. 3.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 382.7x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004136635.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:07:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,761
            CDSs (total)                      :: 2,707
            Genes (coding)                    :: 2,688
            CDSs (with protein)               :: 2,688
            Genes (RNA)                       :: 54
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 19
            CDSs (without protein)            :: 19
            Pseudo Genes (ambiguous residues) :: 0 of 19
            Pseudo Genes (frameshifted)       :: 4 of 19
            Pseudo Genes (incomplete)         :: 16 of 19
            Pseudo Genes (internal stop)      :: 1 of 19
            Pseudo Genes (multiple problems)  :: 2 of 19
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3037640
                     /organism="Rothia halotolerans"
                     /mol_type="genomic DNA"
                     /strain="JCM 31975"
                     /isolation_source="saline soil"
                     /type_material="type strain of Kocuria halotolerans"
                     /db_xref="taxon:405770"
                     /geo_loc_name="China"
                     /collection_date="2009"
WGS         NOIU01000001-NOIU01000010
WGS_SCAFLD  NZ_NOIU01000001-NZ_NOIU01000010
//
LOCUS       NZ_CDVGYU010000000   3941972 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Rheinheimera lutimaris isolate MarMAG_103643, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVGYU000000000
VERSION     NZ_CDVGYU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737680
            Assembly: GCF_977680405.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Rheinheimera lutimaris (freshwater metagenome)
  ORGANISM  Rheinheimera lutimaris
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Chromatiales; Chromatiaceae; Rheinheimera.
REFERENCE   1  (bases 1 to 3941972)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVGYU000000000.1.
            The Rheinheimera lutimaris whole genome shotgun (WGS) project has
            the project accession NZ_CDVGYU000000000.  This version of the
            project (01) has the accession number NZ_CDVGYU010000000, and
            consists of sequences CDVGYU010000001-CDVGYU010000060.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977680405.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:28:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,704
            CDSs (total)                      :: 3,655
            Genes (coding)                    :: 3,633
            CDSs (with protein)               :: 3,633
            Genes (RNA)                       :: 49
            rRNAs                             :: 2 (5S)
            complete rRNAs                    :: 2 (5S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 0 of 22
            Pseudo Genes (incomplete)         :: 21 of 22
            Pseudo Genes (internal stop)      :: 1 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3941972
                     /organism="Rheinheimera lutimaris"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_103643"
                     /isolation_source="Bay water"
                     /db_xref="taxon:2740584"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /metagenome_source="freshwater metagenome"
                     /metagenomic
WGS         CDVGYU010000001-CDVGYU010000060
WGS_SCAFLD  NZ_CDVGYU010000001-NZ_CDVGYU010000060
//
LOCUS       NZ_JBSWTT010000000   4754471 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Ruegeria sp. ABM4_193, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWTT000000000
VERSION     NZ_JBSWTT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862030
            Assembly: GCF_056158705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ruegeria sp. ABM4_193
  ORGANISM  Ruegeria sp. ABM4_193
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Ruegeria.
REFERENCE   1  (bases 1 to 4754471)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWTT000000000.1.
            The Ruegeria sp. ABM4_193 whole genome shotgun (WGS) project has
            the project accession NZ_JBSWTT000000000.  This version of the
            project (01) has the accession number NZ_JBSWTT010000000, and
            consists of sequences JBSWTT010000001-JBSWTT010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 521x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056158705.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:14:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,614
            CDSs (total)                      :: 4,550
            Genes (coding)                    :: 4,517
            CDSs (with protein)               :: 4,517
            Genes (RNA)                       :: 64
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 33
            CDSs (without protein)            :: 33
            Pseudo Genes (ambiguous residues) :: 0 of 33
            Pseudo Genes (frameshifted)       :: 9 of 33
            Pseudo Genes (incomplete)         :: 22 of 33
            Pseudo Genes (internal stop)      :: 9 of 33
            Pseudo Genes (multiple problems)  :: 7 of 33
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4754471
                     /organism="Ruegeria sp. ABM4_193"
                     /mol_type="genomic DNA"
                     /strain="ABM4_193"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477708"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWTT010000001-JBSWTT010000004
WGS_SCAFLD  NZ_JBSWTT010000001-NZ_JBSWTT010000004
//
LOCUS       NZ_JBSWYM010000000   5804998 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudoalteromonas sp. AWH4_217, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWYM000000000
VERSION     NZ_JBSWYM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861893
            Assembly: GCF_056161105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudoalteromonas sp. AWH4_217
  ORGANISM  Pseudoalteromonas sp. AWH4_217
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.
REFERENCE   1  (bases 1 to 5804998)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWYM000000000.1.
            The Pseudoalteromonas sp. AWH4_217 whole genome shotgun (WGS)
            project has the project accession NZ_JBSWYM000000000.  This version
            of the project (01) has the accession number NZ_JBSWYM010000000,
            and consists of sequences JBSWYM010000001-JBSWYM010000112.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 170x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161105.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:51:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,966
            CDSs (total)                      :: 4,833
            Genes (coding)                    :: 4,798
            CDSs (with protein)               :: 4,798
            Genes (RNA)                       :: 133
            rRNAs                             :: 3, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 112
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 8 of 35
            Pseudo Genes (incomplete)         :: 31 of 35
            Pseudo Genes (internal stop)      :: 9 of 35
            Pseudo Genes (multiple problems)  :: 11 of 35
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5804998
                     /organism="Pseudoalteromonas sp. AWH4_217"
                     /mol_type="genomic DNA"
                     /strain="AWH4_217"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477775"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-10-31"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWYM010000001-JBSWYM010000112
WGS_SCAFLD  NZ_JBSWYM010000001-NZ_JBSWYM010000112
//
LOCUS       NZ_SIOQ01000000      7191120 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Rhizobium leguminosarum strain SM136A, whole genome shotgun
            sequencing project.
ACCESSION   NZ_SIOQ00000000
VERSION     NZ_SIOQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10618072
            Assembly: GCF_004304335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Rhizobium leguminosarum
  ORGANISM  Rhizobium leguminosarum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Rhizobium.
REFERENCE   1  (bases 1 to 7191120)
  AUTHORS   Cavassim,M.I.A., Moeskjaer,S., Moslemi,C., Fields,B., Bachmann,A.,
            Vilhjalmsson,B., Schierup,M.H., Young,J.P.W. and Andersen,S.U.
  TITLE     The genomic architecture of introgression among sibling species of
            bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7191120)
  AUTHORS   Cavassim,M.I.A. and Young,J.P.W.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2019) Biology, University of York, Heslington,
            York YO10 5DD, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SIOQ00000000.1.
            The Rhizobium leguminosarum whole genome shotgun (WGS) project has
            the project accession NZ_SIOQ00000000.  This version of the project
            (01) has the accession number NZ_SIOQ01000000, and consists of
            sequences SIOQ01000001-SIOQ01000015.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method           :: SPAdes v. 3.7; Jigome v. 1.0
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: GCF_000023185.1
            Genome Coverage           :: 8.73823x
            Sequencing Technology     :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004304335.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:04:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,001
            CDSs (total)                      :: 6,936
            Genes (coding)                    :: 6,714
            CDSs (with protein)               :: 6,714
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 222
            CDSs (without protein)            :: 222
            Pseudo Genes (ambiguous residues) :: 0 of 222
            Pseudo Genes (frameshifted)       :: 118 of 222
            Pseudo Genes (incomplete)         :: 150 of 222
            Pseudo Genes (internal stop)      :: 26 of 222
            Pseudo Genes (multiple problems)  :: 62 of 222
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7191120
                     /organism="Rhizobium leguminosarum"
                     /mol_type="genomic DNA"
                     /strain="SM136A"
                     /isolation_source="root nodule of Trifolium repens growing
                     with Lolium perenne in an organic farm field"
                     /host="Trifolium repens"
                     /db_xref="taxon:384"
                     /geo_loc_name="Denmark: Central Denmark"
                     /lat_lon="55.096 N 9.274 E"
                     /collection_date="2015-07-20"
WGS         SIOQ01000001-SIOQ01000015
WGS_SCAFLD  NZ_SIOQ01000001-NZ_SIOQ01000015
//
LOCUS       NZ_CDVOFY010000000   2620989 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Qipengyuania flava isolate MarMAG_118367, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CDVOFY000000000
VERSION     NZ_CDVOFY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737625
            Assembly: GCF_977729575.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Qipengyuania flava (marine metagenome)
  ORGANISM  Qipengyuania flava
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Qipengyuania.
REFERENCE   1  (bases 1 to 2620989)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVOFY000000000.1.
            The Qipengyuania flava whole genome shotgun (WGS) project has the
            project accession NZ_CDVOFY000000000.  This version of the project
            (01) has the accession number NZ_CDVOFY010000000, and consists of
            sequences CDVOFY010000001-CDVOFY010000098.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977729575.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:30:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,689
            CDSs (total)                      :: 2,647
            Genes (coding)                    :: 2,616
            CDSs (with protein)               :: 2,616
            Genes (RNA)                       :: 42
            tRNAs                             :: 38
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 1 of 31
            Pseudo Genes (incomplete)         :: 30 of 31
            Pseudo Genes (internal stop)      :: 0 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2620989
                     /organism="Qipengyuania flava"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_118367"
                     /isolation_source="Mariana Trench, particle-associated
                     microorganism hadal water (10,500 m)"
                     /db_xref="taxon:192812"
                     /environmental_sample
                     /geo_loc_name="Pacific Ocean"
                     /collection_date="2016-09-18"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVOFY010000001-CDVOFY010000098
WGS_SCAFLD  NZ_CDVOFY010000001-NZ_CDVOFY010000098
//
LOCUS       NZ_JBSWXY010000000   3904414 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudoalteromonas ruthenica strain ABD4_528, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSWXY000000000
VERSION     NZ_JBSWXY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861907
            Assembly: GCF_056160845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudoalteromonas ruthenica
  ORGANISM  Pseudoalteromonas ruthenica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.
REFERENCE   1  (bases 1 to 3904414)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWXY000000000.1.
            The Pseudoalteromonas ruthenica whole genome shotgun (WGS) project
            has the project accession NZ_JBSWXY000000000.  This version of the
            project (01) has the accession number NZ_JBSWXY010000000, and
            consists of sequences JBSWXY010000001-JBSWXY010000067.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056160845.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:46:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,660
            CDSs (total)                      :: 3,555
            Genes (coding)                    :: 3,533
            CDSs (with protein)               :: 3,533
            Genes (RNA)                       :: 105
            rRNAs                             :: 2, 4, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 3 (16S, 23S)
            tRNAs                             :: 92
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 3 of 22
            Pseudo Genes (incomplete)         :: 16 of 22
            Pseudo Genes (internal stop)      :: 3 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3904414
                     /organism="Pseudoalteromonas ruthenica"
                     /mol_type="genomic DNA"
                     /strain="ABD4_528"
                     /isolation_source="Marine"
                     /db_xref="taxon:151081"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-11-21"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWXY010000001-JBSWXY010000067
WGS_SCAFLD  NZ_JBSWXY010000001-NZ_JBSWXY010000067
//
LOCUS       NZ_JBSWYT010000000   4001129 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudoalteromonas ruthenica strain ABM2_036, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSWYT000000000
VERSION     NZ_JBSWYT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861886
            Assembly: GCF_056161225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudoalteromonas ruthenica
  ORGANISM  Pseudoalteromonas ruthenica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.
REFERENCE   1  (bases 1 to 4001129)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWYT000000000.1.
            The Pseudoalteromonas ruthenica whole genome shotgun (WGS) project
            has the project accession NZ_JBSWYT000000000.  This version of the
            project (01) has the accession number NZ_JBSWYT010000000, and
            consists of sequences JBSWYT010000001-JBSWYT010000048.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 258x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161225.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:48:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,774
            CDSs (total)                      :: 3,651
            Genes (coding)                    :: 3,638
            CDSs (with protein)               :: 3,638
            Genes (RNA)                       :: 123
            rRNAs                             :: 6, 13, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 13, 8 (5S, 16S, 23S)
            tRNAs                             :: 92
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 2 of 13
            Pseudo Genes (incomplete)         :: 11 of 13
            Pseudo Genes (internal stop)      :: 0 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4001129
                     /organism="Pseudoalteromonas ruthenica"
                     /mol_type="genomic DNA"
                     /strain="ABM2_036"
                     /isolation_source="Marine"
                     /db_xref="taxon:151081"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWYT010000001-JBSWYT010000048
WGS_SCAFLD  NZ_JBSWYT010000001-NZ_JBSWYT010000048
//
LOCUS       NZ_JBSWWE010000000   4352174 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Ruegeria arenilitoris strain ABH3_006, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSWWE000000000
VERSION     NZ_JBSWWE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861956
            Assembly: GCF_056159905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ruegeria arenilitoris
  ORGANISM  Ruegeria arenilitoris
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Ruegeria.
REFERENCE   1  (bases 1 to 4352174)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWWE000000000.1.
            The Ruegeria arenilitoris whole genome shotgun (WGS) project has
            the project accession NZ_JBSWWE000000000.  This version of the
            project (01) has the accession number NZ_JBSWWE010000000, and
            consists of sequences JBSWWE010000001-JBSWWE010000005.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 832x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056159905.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:17:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,231
            CDSs (total)                      :: 4,168
            Genes (coding)                    :: 4,152
            CDSs (with protein)               :: 4,152
            Genes (RNA)                       :: 63
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 3 of 16
            Pseudo Genes (incomplete)         :: 15 of 16
            Pseudo Genes (internal stop)      :: 2 of 16
            Pseudo Genes (multiple problems)  :: 3 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4352174
                     /organism="Ruegeria arenilitoris"
                     /mol_type="genomic DNA"
                     /strain="ABH3_006"
                     /isolation_source="Marine"
                     /db_xref="taxon:1173585"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWWE010000001-JBSWWE010000005
WGS_SCAFLD  NZ_JBSWWE010000001-NZ_JBSWWE010000005
//
LOCUS       NZ_CDVOIM010000000   2755420 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Qipengyuania flava isolate MarMAG_118355, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CDVOIM000000000
VERSION     NZ_CDVOIM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120738417
            Assembly: GCF_977730245.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Qipengyuania flava (marine metagenome)
  ORGANISM  Qipengyuania flava
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Qipengyuania.
REFERENCE   1  (bases 1 to 2755420)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVOIM000000000.1.
            The Qipengyuania flava whole genome shotgun (WGS) project has the
            project accession NZ_CDVOIM000000000.  This version of the project
            (01) has the accession number NZ_CDVOIM010000000, and consists of
            sequences CDVOIM010000001-CDVOIM010000300.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977730245.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:37:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,916
            CDSs (total)                      :: 2,873
            Genes (coding)                    :: 2,770
            CDSs (with protein)               :: 2,770
            Genes (RNA)                       :: 43
            tRNAs                             :: 39
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 103
            CDSs (without protein)            :: 103
            Pseudo Genes (ambiguous residues) :: 0 of 103
            Pseudo Genes (frameshifted)       :: 5 of 103
            Pseudo Genes (incomplete)         :: 97 of 103
            Pseudo Genes (internal stop)      :: 3 of 103
            Pseudo Genes (multiple problems)  :: 2 of 103
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2755420
                     /organism="Qipengyuania flava"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_118355"
                     /isolation_source="surface seawater"
                     /db_xref="taxon:192812"
                     /environmental_sample
                     /geo_loc_name="Costa Rica"
                     /collection_date="2005-07-30"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVOIM010000001-CDVOIM010000300
WGS_SCAFLD  NZ_CDVOIM010000001-NZ_CDVOIM010000300
//
LOCUS       NZ_CDVOHP010000000   4039557 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Pseudoalteromonas lipolytica isolate MarMAG_096435, whole
            genome shotgun sequencing project.
ACCESSION   NZ_CDVOHP000000000
VERSION     NZ_CDVOHP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120738073
            Assembly: GCF_977730005.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Pseudoalteromonas lipolytica (marine metagenome)
  ORGANISM  Pseudoalteromonas lipolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.
REFERENCE   1  (bases 1 to 4039557)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVOHP000000000.1.
            The Pseudoalteromonas lipolytica whole genome shotgun (WGS) project
            has the project accession NZ_CDVOHP000000000.  This version of the
            project (01) has the accession number NZ_CDVOHP010000000, and
            consists of sequences CDVOHP010000001-CDVOHP010000154.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977730005.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:41:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,596
            CDSs (total)                      :: 3,559
            Genes (coding)                    :: 3,525
            CDSs (with protein)               :: 3,525
            Genes (RNA)                       :: 37
            tRNAs                             :: 33
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 4 of 34
            Pseudo Genes (incomplete)         :: 26 of 34
            Pseudo Genes (internal stop)      :: 4 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4039557
                     /organism="Pseudoalteromonas lipolytica"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_096435"
                     /isolation_source="Pacific Ocean"
                     /db_xref="taxon:570156"
                     /environmental_sample
                     /geo_loc_name="Pacific Ocean"
                     /collection_date="2013-06-22"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVOHP010000001-CDVOHP010000154
WGS_SCAFLD  NZ_CDVOHP010000001-NZ_CDVOHP010000154
//
LOCUS       NZ_CDVLHA010000000   4357810 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Roseivirga spongicola isolate MarMAG_115745, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVLHA000000000
VERSION     NZ_CDVLHA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120738431
            Assembly: GCF_977709585.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Roseivirga spongicola (marine metagenome)
  ORGANISM  Roseivirga spongicola
            Bacteria; Pseudomonadati; Bacteroidota; Cytophagia; Cytophagales;
            Roseivirgaceae; Roseivirga.
REFERENCE   1  (bases 1 to 4357810)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVLHA000000000.1.
            The Roseivirga spongicola whole genome shotgun (WGS) project has
            the project accession NZ_CDVLHA000000000.  This version of the
            project (01) has the accession number NZ_CDVLHA010000000, and
            consists of sequences CDVLHA010000001-CDVLHA010000047.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977709585.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:30:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,841
            CDSs (total)                      :: 3,805
            Genes (coding)                    :: 3,791
            CDSs (with protein)               :: 3,791
            Genes (RNA)                       :: 36
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 14
            CDSs (without protein)            :: 14
            Pseudo Genes (ambiguous residues) :: 0 of 14
            Pseudo Genes (frameshifted)       :: 2 of 14
            Pseudo Genes (incomplete)         :: 12 of 14
            Pseudo Genes (internal stop)      :: 1 of 14
            Pseudo Genes (multiple problems)  :: 1 of 14
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4357810
                     /organism="Roseivirga spongicola"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_115745"
                     /isolation_source="surface seawater"
                     /db_xref="taxon:333140"
                     /environmental_sample
                     /geo_loc_name="Costa Rica"
                     /collection_date="2005-07-01"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVLHA010000001-CDVLHA010000047
WGS_SCAFLD  NZ_CDVLHA010000001-NZ_CDVLHA010000047
//
LOCUS       NZ_CDVHBP010000000   3238799 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Qipengyuania pacifica isolate MarMAG_116288, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVHBP000000000
VERSION     NZ_CDVHBP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120738511
            Assembly: GCF_977681125.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Qipengyuania pacifica (marine metagenome)
  ORGANISM  Qipengyuania pacifica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Qipengyuania.
REFERENCE   1  (bases 1 to 3238799)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVHBP000000000.1.
            The Qipengyuania pacifica whole genome shotgun (WGS) project has
            the project accession NZ_CDVHBP000000000.  This version of the
            project (01) has the accession number NZ_CDVHBP010000000, and
            consists of sequences CDVHBP010000001-CDVHBP010000023.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977681125.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:36:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,135
            CDSs (total)                      :: 3,088
            Genes (coding)                    :: 3,073
            CDSs (with protein)               :: 3,073
            Genes (RNA)                       :: 47
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 15
            CDSs (without protein)            :: 15
            Pseudo Genes (ambiguous residues) :: 0 of 15
            Pseudo Genes (frameshifted)       :: 2 of 15
            Pseudo Genes (incomplete)         :: 11 of 15
            Pseudo Genes (internal stop)      :: 3 of 15
            Pseudo Genes (multiple problems)  :: 1 of 15
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3238799
                     /organism="Qipengyuania pacifica"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_116288"
                     /isolation_source="surface seawater"
                     /db_xref="taxon:2860199"
                     /environmental_sample
                     /geo_loc_name="Costa Rica"
                     /collection_date="2005-07-01"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVHBP010000001-CDVHBP010000023
WGS_SCAFLD  NZ_CDVHBP010000001-NZ_CDVHBP010000023
//
LOCUS       NZ_JANXKT010000000   2381037 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudolactococcus carnosus strain TMW 2.2571, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JANXKT000000000
VERSION     NZ_JANXKT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN30630353
            Assembly: GCF_056172675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudolactococcus carnosus (Lactococcus carnosus)
  ORGANISM  Pseudolactococcus carnosus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Pseudolactococcus.
REFERENCE   1  (bases 1 to 2381037)
  AUTHORS   Matthias,E. and Werum,V.
  TITLE     Diversity of Dellaglioa algida
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2381037)
  AUTHORS   Matthias,E. and Werum,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-SEP-2022) Mikrobiologie, Technische Universitaet
            Muenchen, Gregor-Mendel Str. 4, Freising 85354, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JANXKT000000000.1.
            The Pseudolactococcus carnosus whole genome shotgun (WGS) project
            has the project accession NZ_JANXKT000000000.  This version of the
            project (01) has the accession number NZ_JANXKT010000000, and
            consists of sequences JANXKT010000001-JANXKT010000071.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 558x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172675.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:53:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,346
            CDSs (total)                      :: 2,296
            Genes (coding)                    :: 2,256
            CDSs (with protein)               :: 2,256
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 41
            CDSs (without protein)            :: 40
            Pseudo Genes (ambiguous residues) :: 0 of 41
            Pseudo Genes (frameshifted)       :: 8 of 41
            Pseudo Genes (incomplete)         :: 31 of 41
            Pseudo Genes (internal stop)      :: 6 of 41
            Pseudo Genes (multiple problems)  :: 4 of 41
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2381037
                     /organism="Pseudolactococcus carnosus"
                     /mol_type="genomic DNA"
                     /strain="TMW 2.2571"
                     /isolation_source="high oxygen packaged turkey steak (+ 2
                     CD, spoiled)"
                     /db_xref="taxon:2749961"
                     /geo_loc_name="Germany: Bavaria"
                     /collection_date="2022-06-01"
WGS         JANXKT010000001-JANXKT010000071
WGS_SCAFLD  NZ_JANXKT010000001-NZ_JANXKT010000071
//
LOCUS       NZ_CDVFFN010000000   3238457 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Qipengyuania pacifica isolate MarMAG_116287, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVFFN000000000
VERSION     NZ_CDVFFN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120738505
            Assembly: GCF_977668635.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Qipengyuania pacifica (marine metagenome)
  ORGANISM  Qipengyuania pacifica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Qipengyuania.
REFERENCE   1  (bases 1 to 3238457)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVFFN000000000.1.
            The Qipengyuania pacifica whole genome shotgun (WGS) project has
            the project accession NZ_CDVFFN000000000.  This version of the
            project (01) has the accession number NZ_CDVFFN010000000, and
            consists of sequences CDVFFN010000001-CDVFFN010000022.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977668635.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:32:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,119
            CDSs (total)                      :: 3,072
            Genes (coding)                    :: 3,058
            CDSs (with protein)               :: 3,058
            Genes (RNA)                       :: 47
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 14
            CDSs (without protein)            :: 14
            Pseudo Genes (ambiguous residues) :: 0 of 14
            Pseudo Genes (frameshifted)       :: 3 of 14
            Pseudo Genes (incomplete)         :: 9 of 14
            Pseudo Genes (internal stop)      :: 4 of 14
            Pseudo Genes (multiple problems)  :: 2 of 14
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3238457
                     /organism="Qipengyuania pacifica"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_116287"
                     /isolation_source="surface seawater"
                     /db_xref="taxon:2860199"
                     /environmental_sample
                     /geo_loc_name="Costa Rica"
                     /collection_date="2005-07-01"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVFFN010000001-CDVFFN010000022
WGS_SCAFLD  NZ_CDVFFN010000001-NZ_CDVFFN010000022
//
LOCUS       NZ_JBSWWK010000000   4840999 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Ruegeria sp. ABF4_144, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWWK000000000
VERSION     NZ_JBSWWK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861950
            Assembly: GCF_056160045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ruegeria sp. ABF4_144
  ORGANISM  Ruegeria sp. ABF4_144
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Ruegeria.
REFERENCE   1  (bases 1 to 4840999)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWWK000000000.1.
            The Ruegeria sp. ABF4_144 whole genome shotgun (WGS) project has
            the project accession NZ_JBSWWK000000000.  This version of the
            project (01) has the accession number NZ_JBSWWK010000000, and
            consists of sequences JBSWWK010000001-JBSWWK010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 823x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056160045.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:24:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,674
            CDSs (total)                      :: 4,608
            Genes (coding)                    :: 4,586
            CDSs (with protein)               :: 4,586
            Genes (RNA)                       :: 66
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 10 of 22
            Pseudo Genes (incomplete)         :: 15 of 22
            Pseudo Genes (internal stop)      :: 8 of 22
            Pseudo Genes (multiple problems)  :: 10 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4840999
                     /organism="Ruegeria sp. ABF4_144"
                     /mol_type="genomic DNA"
                     /strain="ABF4_144"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477739"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWWK010000001-JBSWWK010000004
WGS_SCAFLD  NZ_JBSWWK010000001-NZ_JBSWWK010000004
//
LOCUS       NZ_JBKFGI010000000   4579095 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Romboutsia sp. LXY-2, whole genome shotgun sequencing project.
ACCESSION   NZ_JBKFGI000000000
VERSION     NZ_JBKFGI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44702177
            Assembly: GCF_056171995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Romboutsia sp. LXY-2
  ORGANISM  Romboutsia sp. LXY-2
            Bacteria; Bacillati; Bacillota; Clostridia; Peptostreptococcales;
            Peptostreptococcaceae; Romboutsia.
REFERENCE   1  (bases 1 to 4579095)
  AUTHORS   Wu,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-DEC-2024) Institute of Science Research, China
            University of Geosciences(Beijing), Haidian, Beijing, Beijing
            100083, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBKFGI000000000.1.
            The Romboutsia sp. LXY-2 whole genome shotgun (WGS) project has the
            project accession NZ_JBKFGI000000000.  This version of the project
            (01) has the accession number NZ_JBKFGI010000000, and consists of
            sequences JBKFGI010000001-JBKFGI010000052.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056171995.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:39:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,460
            CDSs (total)                      :: 4,370
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 90
            rRNAs                             :: 14, 6, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 6 (5S)
            partial rRNAs                     :: 8, 6, 7 (5S, 16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 4 of 28
            Pseudo Genes (incomplete)         :: 22 of 28
            Pseudo Genes (internal stop)      :: 3 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4579095
                     /organism="Romboutsia sp. LXY-2"
                     /mol_type="genomic DNA"
                     /strain="LXY-2"
                     /isolation_source="soil"
                     /db_xref="taxon:3379827"
                     /geo_loc_name="China"
                     /collection_date="2024"
WGS         JBKFGI010000001-JBKFGI010000052
WGS_SCAFLD  NZ_JBKFGI010000001-NZ_JBKFGI010000052
//
LOCUS       NZ_JAIVZU010000000   4567187 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Pseudoalteromonas shioyasakiensis isolate SFP3_US_10_2, whole
            genome shotgun sequencing project.
ACCESSION   NZ_JAIVZU000000000
VERSION     NZ_JAIVZU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17982471
            Assembly: GCF_048634755.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Pseudoalteromonas shioyasakiensis (cold seep metagenome)
  ORGANISM  Pseudoalteromonas shioyasakiensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.
REFERENCE   1  (bases 1 to 4567187)
  AUTHORS   Li,W.
  TITLE     Metagenomic views of element cycling mediated by sulfur metabolism
            microbes in cold seep surface sediment
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4567187)
  AUTHORS   Li,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-FEB-2021) The science department, Institute of
            Deep-sea Science and Engineering, Luhuitou street, Sanya 572000,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIVZU000000000.1.
            The Pseudoalteromonas shioyasakiensis whole genome shotgun (WGS)
            project has the project accession NZ_JAIVZU000000000.  This version
            of the project (01) has the accession number NZ_JAIVZU010000000,
            and consists of sequences JAIVZU010000001-JAIVZU010000088.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. 1.2.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 0.0852562402375x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_048634755.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:46:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,183
            CDSs (total)                      :: 4,103
            Genes (coding)                    :: 4,075
            CDSs (with protein)               :: 4,075
            Genes (RNA)                       :: 80
            rRNAs                             :: 2, 1 (5S, 16S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 73
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 4 of 28
            Pseudo Genes (incomplete)         :: 24 of 28
            Pseudo Genes (internal stop)      :: 0 of 28
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4567187
                     /organism="Pseudoalteromonas shioyasakiensis"
                     /mol_type="genomic DNA"
                     /isolate="SFP3_US_10_2"
                     /isolation_source="cold seep sediments"
                     /db_xref="taxon:1190813"
                     /environmental_sample
                     /geo_loc_name="Pacific Ocean: South China Sea"
                     /lat_lon="22.1162 N 119.2847 E"
                     /collection_date="2018-05-13"
                     /metagenome_source="cold seep metagenome"
                     /metagenomic
WGS         JAIVZU010000001-JAIVZU010000088
WGS_SCAFLD  NZ_JAIVZU010000001-NZ_JAIVZU010000088
//
LOCUS       NZ_JBSWYP010000000   4759845 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Ruegeria sp. ABV3_008, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWYP000000000
VERSION     NZ_JBSWYP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861890
            Assembly: GCF_056161185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ruegeria sp. ABV3_008
  ORGANISM  Ruegeria sp. ABV3_008
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Ruegeria.
REFERENCE   1  (bases 1 to 4759845)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWYP000000000.1.
            The Ruegeria sp. ABV3_008 whole genome shotgun (WGS) project has
            the project accession NZ_JBSWYP000000000.  This version of the
            project (01) has the accession number NZ_JBSWYP010000000, and
            consists of sequences JBSWYP010000001-JBSWYP010000035.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 223x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161185.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:46:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,619
            CDSs (total)                      :: 4,565
            Genes (coding)                    :: 4,509
            CDSs (with protein)               :: 4,509
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 56
            CDSs (without protein)            :: 56
            Pseudo Genes (ambiguous residues) :: 0 of 56
            Pseudo Genes (frameshifted)       :: 22 of 56
            Pseudo Genes (incomplete)         :: 36 of 56
            Pseudo Genes (internal stop)      :: 24 of 56
            Pseudo Genes (multiple problems)  :: 23 of 56
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4759845
                     /organism="Ruegeria sp. ABV3_008"
                     /mol_type="genomic DNA"
                     /strain="ABV3_008"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477776"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWYP010000001-JBSWYP010000035
WGS_SCAFLD  NZ_JBSWYP010000001-NZ_JBSWYP010000035
//
LOCUS       NZ_JBQWNO010000000   1996122 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pediococcus acidilactici strain PA14, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBQWNO000000000
VERSION     NZ_JBQWNO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50892793
            Assembly: GCF_056155685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pediococcus acidilactici
  ORGANISM  Pediococcus acidilactici
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Pediococcus; Pediococcus acidilactici group.
REFERENCE   1  (bases 1 to 1996122)
  AUTHORS   Chaichana,N.
  TITLE     Comparative Genomic Analysis of the Pediococcus Genus Reveals
            Functional Diversity Supporting Applications in Fermentation and
            Probiotics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1996122)
  AUTHORS   Chaichana,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-AUG-2025) Biomedical Sciences and Biomedical
            Engineering, Prince of Songkla University, Karnjanavanich Rd,
            Hatyai, Songkhla 90110, Thailand
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBQWNO000000000.1.
            The Pediococcus acidilactici whole genome shotgun (WGS) project has
            the project accession NZ_JBQWNO000000000.  This version of the
            project (01) has the accession number NZ_JBQWNO010000000, and
            consists of sequences JBQWNO010000001-JBQWNO010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.1.12
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGIseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155685.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,932
            CDSs (total)                      :: 1,857
            Genes (coding)                    :: 1,823
            CDSs (with protein)               :: 1,823
            Genes (RNA)                       :: 75
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 9 of 34
            Pseudo Genes (incomplete)         :: 21 of 34
            Pseudo Genes (internal stop)      :: 6 of 34
            Pseudo Genes (multiple problems)  :: 2 of 34
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1996122
                     /organism="Pediococcus acidilactici"
                     /mol_type="genomic DNA"
                     /strain="PA14"
                     /isolation_source="fermented food"
                     /db_xref="taxon:1254"
                     /geo_loc_name="Thailand"
                     /collection_date="2023"
WGS         JBQWNO010000001-JBQWNO010000004
WGS_SCAFLD  NZ_JBQWNO010000001-NZ_JBQWNO010000004
//
LOCUS       NZ_JBQWNL010000000   1806739 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pediococcus pentosaceus strain NH2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBQWNL000000000
VERSION     NZ_JBQWNL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50892790
            Assembly: GCF_056155745.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pediococcus pentosaceus
  ORGANISM  Pediococcus pentosaceus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Pediococcus.
REFERENCE   1  (bases 1 to 1806739)
  AUTHORS   Chaichana,N.
  TITLE     Comparative Genomic Analysis of the Pediococcus Genus Reveals
            Functional Diversity Supporting Applications in Fermentation and
            Probiotics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1806739)
  AUTHORS   Chaichana,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-AUG-2025) Biomedical Sciences and Biomedical
            Engineering, Prince of Songkla University, Karnjanavanich Rd,
            Hatyai, Songkhla 90110, Thailand
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBQWNL000000000.1.
            The Pediococcus pentosaceus whole genome shotgun (WGS) project has
            the project accession NZ_JBQWNL000000000.  This version of the
            project (01) has the accession number NZ_JBQWNL010000000, and
            consists of sequences JBQWNL010000001-JBQWNL010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.1.12
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGIseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155745.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:46:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,801
            CDSs (total)                      :: 1,727
            Genes (coding)                    :: 1,689
            CDSs (with protein)               :: 1,689
            Genes (RNA)                       :: 74
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 38
            CDSs (without protein)            :: 38
            Pseudo Genes (ambiguous residues) :: 0 of 38
            Pseudo Genes (frameshifted)       :: 15 of 38
            Pseudo Genes (incomplete)         :: 14 of 38
            Pseudo Genes (internal stop)      :: 14 of 38
            Pseudo Genes (multiple problems)  :: 5 of 38
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1806739
                     /organism="Pediococcus pentosaceus"
                     /mol_type="genomic DNA"
                     /strain="NH2"
                     /isolation_source="fermented food"
                     /db_xref="taxon:1255"
                     /geo_loc_name="Thailand"
                     /collection_date="2023"
WGS         JBQWNL010000001-JBQWNL010000002
WGS_SCAFLD  NZ_JBQWNL010000001-NZ_JBQWNL010000002
//
LOCUS       NZ_JBNHEO010000000   4077749 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Proteus mirabilis strain 87H:C, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBNHEO000000000
VERSION     NZ_JBNHEO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN46311745
            Assembly: GCF_056156865.1
KEYWORDS    WGS; RefSeq.
SOURCE      Proteus mirabilis
  ORGANISM  Proteus mirabilis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Proteus.
REFERENCE   1  (bases 1 to 4077749)
  AUTHORS   Martel,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2025) bacteriology, CHU Arnaud de Villeneuve
            Montpellier, 191 avenue du Doyen Gaston Giraud, Montpellier 34295,
            France
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNHEO000000000.1.
            The Proteus mirabilis whole genome shotgun (WGS) project has the
            project accession NZ_JBNHEO000000000.  This version of the project
            (01) has the accession number NZ_JBNHEO010000000, and consists of
            sequences JBNHEO010000001-JBNHEO010000020.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Complete Genomics
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056156865.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:22:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,820
            CDSs (total)                      :: 3,731
            Genes (coding)                    :: 3,686
            CDSs (with protein)               :: 3,686
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 4 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 45
            CDSs (without protein)            :: 45
            Pseudo Genes (ambiguous residues) :: 0 of 45
            Pseudo Genes (frameshifted)       :: 13 of 45
            Pseudo Genes (incomplete)         :: 33 of 45
            Pseudo Genes (internal stop)      :: 13 of 45
            Pseudo Genes (multiple problems)  :: 12 of 45
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4077749
                     /organism="Proteus mirabilis"
                     /mol_type="genomic DNA"
                     /strain="87H:C"
                     /host="yellow legged gulls"
                     /db_xref="taxon:584"
                     /geo_loc_name="France: Montpellier"
                     /collection_date="2023-06-26"
                     /collected_by="Nicolas Martel"
WGS         JBNHEO010000001-JBNHEO010000020
WGS_SCAFLD  NZ_JBNHEO010000001-NZ_JBNHEO010000020
//
LOCUS       NZ_CDVHAK010000000   4112039 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Pseudoalteromonas tetraodonis isolate MarMAG_001429, whole
            genome shotgun sequencing project.
ACCESSION   NZ_CDVHAK000000000
VERSION     NZ_CDVHAK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120738070
            Assembly: GCF_977680845.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Pseudoalteromonas tetraodonis (marine metagenome)
  ORGANISM  Pseudoalteromonas tetraodonis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.
REFERENCE   1  (bases 1 to 4112039)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVHAK000000000.1.
            The Pseudoalteromonas tetraodonis whole genome shotgun (WGS)
            project has the project accession NZ_CDVHAK000000000.  This version
            of the project (01) has the accession number NZ_CDVHAK010000000,
            and consists of sequences CDVHAK010000001-CDVHAK010000080.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977680845.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:36:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,755
            CDSs (total)                      :: 3,695
            Genes (coding)                    :: 3,653
            CDSs (with protein)               :: 3,653
            Genes (RNA)                       :: 60
            rRNAs                             :: 7 (5S)
            complete rRNAs                    :: 7 (5S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 17 of 42
            Pseudo Genes (incomplete)         :: 26 of 42
            Pseudo Genes (internal stop)      :: 11 of 42
            Pseudo Genes (multiple problems)  :: 11 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4112039
                     /organism="Pseudoalteromonas tetraodonis"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_001429"
                     /isolation_source="Pacific Ocean"
                     /db_xref="taxon:43659"
                     /environmental_sample
                     /geo_loc_name="Pacific Ocean"
                     /collection_date="2013-06-22"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVHAK010000001-CDVHAK010000080
WGS_SCAFLD  NZ_CDVHAK010000001-NZ_CDVHAK010000080
//
LOCUS       NZ_JBSWYA010000000   3746213 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Ruegeria sp. ABD4_443, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWYA000000000
VERSION     NZ_JBSWYA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861905
            Assembly: GCF_056160865.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ruegeria sp. ABD4_443
  ORGANISM  Ruegeria sp. ABD4_443
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Ruegeria.
REFERENCE   1  (bases 1 to 3746213)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWYA000000000.1.
            The Ruegeria sp. ABD4_443 whole genome shotgun (WGS) project has
            the project accession NZ_JBSWYA000000000.  This version of the
            project (01) has the accession number NZ_JBSWYA010000000, and
            consists of sequences JBSWYA010000001-JBSWYA010000026.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 115x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056160865.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:48:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,703
            CDSs (total)                      :: 3,652
            Genes (coding)                    :: 3,626
            CDSs (with protein)               :: 3,626
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 7 of 26
            Pseudo Genes (incomplete)         :: 21 of 26
            Pseudo Genes (internal stop)      :: 3 of 26
            Pseudo Genes (multiple problems)  :: 4 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3746213
                     /organism="Ruegeria sp. ABD4_443"
                     /mol_type="genomic DNA"
                     /strain="ABD4_443"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477768"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-11-21"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWYA010000001-JBSWYA010000026
WGS_SCAFLD  NZ_JBSWYA010000001-NZ_JBSWYA010000026
//
LOCUS       NZ_JBUBQD010000000   6623345 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas trutticola BRTCR10, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBUBQD000000000
VERSION     NZ_JBUBQD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52920053
            Assembly: GCF_056155105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas trutticola BRTCR10
  ORGANISM  Pseudomonas trutticola BRTCR10
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6623345)
  AUTHORS   Shahi,N., Kala,K. and Mallik,S.K.
  TITLE     WGS of Pseudomonas trutticola
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6623345)
  AUTHORS   Shahi,N., Kala,K. and Mallik,S.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-DEC-2025) Diagnostic Bacteriology Laboratory,
            ICAR-Central Institute of Coldwater Fisheries Research, Dr Neetu
            Shahi, Bhimtal, Uttarakhand 263136, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBUBQD000000000.1.
            The Pseudomonas trutticola BRTCR10 whole genome shotgun (WGS)
            project has the project accession NZ_JBUBQD000000000.  This version
            of the project (01) has the accession number NZ_JBUBQD010000000,
            and consists of sequence JBUBQD010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Diagnostic Bacteriology
            Laboratory, CICFR, Bhimtal Neetu Shahi.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 20-MAR-2025
            Assembly Method        :: SPAdes v. 4.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155105.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:11:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,035
            CDSs (total)                      :: 5,944
            Genes (coding)                    :: 5,880
            CDSs (with protein)               :: 5,880
            Genes (RNA)                       :: 91
            rRNAs                             :: 5, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 11 of 64
            Pseudo Genes (incomplete)         :: 54 of 64
            Pseudo Genes (internal stop)      :: 7 of 64
            Pseudo Genes (multiple problems)  :: 8 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6623345
                     /organism="Pseudomonas trutticola BRTCR10"
                     /mol_type="genomic DNA"
                     /strain="BRTCR10"
                     /isolation_source="Body ulcer"
                     /host="Grass carp"
                     /db_xref="taxon:3470387"
                     /geo_loc_name="India"
                     /altitude="2286 m"
                     /collection_date="2022-02-07"
                     /collected_by="DCFR"
                     /identified_by="Neetu Shahi"
WGS         JBUBQD010000001
WGS_SCAFLD  NZ_CM149552
//
LOCUS       NZ_JBSWTG010000000   5326022 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Planctobacterium sp. AWH2_060, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWTG000000000
VERSION     NZ_JBSWTG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862044
            Assembly: GCF_056158425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Planctobacterium sp. AWH2_060
  ORGANISM  Planctobacterium sp. AWH2_060
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Alteromonadaceae; Planctobacterium.
REFERENCE   1  (bases 1 to 5326022)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWTG000000000.1.
            The Planctobacterium sp. AWH2_060 whole genome shotgun (WGS)
            project has the project accession NZ_JBSWTG000000000.  This version
            of the project (01) has the accession number NZ_JBSWTG010000000,
            and consists of sequences JBSWTG010000001-JBSWTG010000007.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 713x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056158425.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:11:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,651
            CDSs (total)                      :: 4,586
            Genes (coding)                    :: 4,539
            CDSs (with protein)               :: 4,539
            Genes (RNA)                       :: 65
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 47
            CDSs (without protein)            :: 47
            Pseudo Genes (ambiguous residues) :: 0 of 47
            Pseudo Genes (frameshifted)       :: 12 of 47
            Pseudo Genes (incomplete)         :: 33 of 47
            Pseudo Genes (internal stop)      :: 6 of 47
            Pseudo Genes (multiple problems)  :: 4 of 47
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5326022
                     /organism="Planctobacterium sp. AWH2_060"
                     /mol_type="genomic DNA"
                     /strain="AWH2_060"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477698"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-10-31"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWTG010000001-JBSWTG010000007
WGS_SCAFLD  NZ_JBSWTG010000001-NZ_JBSWTG010000007
//
LOCUS       NZ_JBQWNK010000000   1818212 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pediococcus pentosaceus strain MC22, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBQWNK000000000
VERSION     NZ_JBQWNK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50892789
            Assembly: GCF_056155765.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pediococcus pentosaceus
  ORGANISM  Pediococcus pentosaceus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Pediococcus.
REFERENCE   1  (bases 1 to 1818212)
  AUTHORS   Chaichana,N.
  TITLE     Comparative Genomic Analysis of the Pediococcus Genus Reveals
            Functional Diversity Supporting Applications in Fermentation and
            Probiotics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1818212)
  AUTHORS   Chaichana,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-AUG-2025) Biomedical Sciences and Biomedical
            Engineering, Prince of Songkla University, Karnjanavanich Rd,
            Hatyai, Songkhla 90110, Thailand
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBQWNK000000000.1.
            The Pediococcus pentosaceus whole genome shotgun (WGS) project has
            the project accession NZ_JBQWNK000000000.  This version of the
            project (01) has the accession number NZ_JBQWNK010000000, and
            consists of sequences JBQWNK010000001-JBQWNK010000017.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.1.12
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGIseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155765.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:48:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,832
            CDSs (total)                      :: 1,765
            Genes (coding)                    :: 1,733
            CDSs (with protein)               :: 1,733
            Genes (RNA)                       :: 67
            rRNAs                             :: 4, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 32
            CDSs (without protein)            :: 32
            Pseudo Genes (ambiguous residues) :: 0 of 32
            Pseudo Genes (frameshifted)       :: 15 of 32
            Pseudo Genes (incomplete)         :: 12 of 32
            Pseudo Genes (internal stop)      :: 11 of 32
            Pseudo Genes (multiple problems)  :: 6 of 32
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1818212
                     /organism="Pediococcus pentosaceus"
                     /mol_type="genomic DNA"
                     /strain="MC22"
                     /isolation_source="fermented food"
                     /db_xref="taxon:1255"
                     /geo_loc_name="Thailand"
                     /collection_date="2023"
WGS         JBQWNK010000001-JBQWNK010000017
WGS_SCAFLD  NZ_JBQWNK010000001-NZ_JBQWNK010000017
//
LOCUS       NZ_JBREIE010000000   6035551 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas fragariae (ex Marin et al. 2024) strain J3, whole
            genome shotgun sequencing project.
ACCESSION   NZ_JBREIE000000000
VERSION     NZ_JBREIE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51224421
            Assembly: GCF_056155925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas fragariae (ex Marin et al. 2024)
  ORGANISM  Pseudomonas fragariae (ex Marin et al. 2024)
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6035551)
  AUTHORS   Nunez,P., Apablaza,H., Morales,C. and Ortega,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-SEP-2025) Research and development, Agroadvance spa.,
            Camino a Melipilla 26200, Santiago, RM 9750000, Chile
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBREIE000000000.1.
            The Pseudomonas fragariae (ex Marin et al. 2024) whole genome
            shotgun (WGS) project has the project accession NZ_JBREIE000000000.
            This version of the project (01) has the accession number
            NZ_JBREIE010000000, and consists of sequence JBREIE010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Agroadvance R&D.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2025
            Assembly Method        :: Flye v. 2.9.6
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 164.0x
            Sequencing Technology  :: Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155925.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:51:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,239
            CDSs (total)                      :: 5,156
            Genes (coding)                    :: 5,013
            CDSs (with protein)               :: 5,013
            Genes (RNA)                       :: 83
            rRNAs                             :: 6, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 143
            CDSs (without protein)            :: 143
            Pseudo Genes (ambiguous residues) :: 0 of 143
            Pseudo Genes (frameshifted)       :: 43 of 143
            Pseudo Genes (incomplete)         :: 113 of 143
            Pseudo Genes (internal stop)      :: 19 of 143
            Pseudo Genes (multiple problems)  :: 24 of 143
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6035551
                     /organism="Pseudomonas fragariae (ex Marin et al. 2024)"
                     /mol_type="genomic DNA"
                     /strain="J3"
                     /host="Prunus avium"
                     /db_xref="taxon:3080056"
                     /geo_loc_name="Chile"
                     /collection_date="2019"
WGS         JBREIE010000001
WGS_SCAFLD  NZ_CM149584
//
LOCUS       NZ_JBQWNI010000000   1841124 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pediococcus acidilactici strain CLF11, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBQWNI000000000
VERSION     NZ_JBQWNI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50892786
            Assembly: GCF_056155805.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pediococcus acidilactici
  ORGANISM  Pediococcus acidilactici
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Pediococcus; Pediococcus acidilactici group.
REFERENCE   1  (bases 1 to 1841124)
  AUTHORS   Chaichana,N.
  TITLE     Comparative Genomic Analysis of the Pediococcus Genus Reveals
            Functional Diversity Supporting Applications in Fermentation and
            Probiotics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1841124)
  AUTHORS   Chaichana,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-AUG-2025) Biomedical Sciences and Biomedical
            Engineering, Prince of Songkla University, Karnjanavanich Rd,
            Hatyai, Songkhla 90110, Thailand
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBQWNI000000000.1.
            The Pediococcus acidilactici whole genome shotgun (WGS) project has
            the project accession NZ_JBQWNI000000000.  This version of the
            project (01) has the accession number NZ_JBQWNI010000000, and
            consists of sequences JBQWNI010000001-JBQWNI010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.1.12
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGIseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155805.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:48:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,748
            Genes (coding)                    :: 1,718
            CDSs (with protein)               :: 1,718
            Genes (RNA)                       :: 75
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 30
            CDSs (without protein)            :: 30
            Pseudo Genes (ambiguous residues) :: 0 of 30
            Pseudo Genes (frameshifted)       :: 17 of 30
            Pseudo Genes (incomplete)         :: 11 of 30
            Pseudo Genes (internal stop)      :: 5 of 30
            Pseudo Genes (multiple problems)  :: 3 of 30
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1841124
                     /organism="Pediococcus acidilactici"
                     /mol_type="genomic DNA"
                     /strain="CLF11"
                     /isolation_source="fermented food"
                     /db_xref="taxon:1254"
                     /geo_loc_name="Thailand"
                     /collection_date="2023"
WGS         JBQWNI010000001-JBQWNI010000002
WGS_SCAFLD  NZ_JBQWNI010000001-NZ_JBQWNI010000002
//
LOCUS       NZ_JBRFLM010000000   6041035 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas syringae pv. syringae strain BC-0774, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JBRFLM000000000
VERSION     NZ_JBRFLM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51206046
            Assembly: GCF_056155885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas syringae pv. syringae
  ORGANISM  Pseudomonas syringae pv. syringae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas
            syringae.
REFERENCE   1  (bases 1 to 6041035)
  AUTHORS   Nunez,P., Apablaza,H., Morales,C. and Ortega,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-SEP-2025) Research and development, Agroadvance spa.,
            Camino a Melipilla 26200, Santiago, RM 9750000, Chile
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRFLM000000000.1.
            The Pseudomonas syringae pv. syringae whole genome shotgun (WGS)
            project has the project accession NZ_JBRFLM000000000.  This version
            of the project (01) has the accession number NZ_JBRFLM010000000,
            and consists of sequences JBRFLM010000001-JBRFLM010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Agroadvance R&D.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2025
            Assembly Method        :: Flye v. 2.9.6
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110.0x
            Sequencing Technology  :: Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155885.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:02:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,303
            CDSs (total)                      :: 5,220
            Genes (coding)                    :: 5,101
            CDSs (with protein)               :: 5,101
            Genes (RNA)                       :: 83
            rRNAs                             :: 6, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 119
            CDSs (without protein)            :: 119
            Pseudo Genes (ambiguous residues) :: 0 of 119
            Pseudo Genes (frameshifted)       :: 32 of 119
            Pseudo Genes (incomplete)         :: 103 of 119
            Pseudo Genes (internal stop)      :: 20 of 119
            Pseudo Genes (multiple problems)  :: 31 of 119
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6041035
                     /organism="Pseudomonas syringae pv. syringae"
                     /mol_type="genomic DNA"
                     /strain="BC-0774"
                     /isolation_source="fruit"
                     /host="Prunus avium"
                     /db_xref="taxon:321"
                     /geo_loc_name="Chile: Region de O'higgins"
                     /collection_date="2024"
WGS         JBRFLM010000001-JBRFLM010000002
WGS_SCAFLD  NZ_CM149582
WGS_SCAFLD  NZ_JBRFLM010000002
//
LOCUS       NZ_JBSWUB010000000   5144494 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Priestia sp. ABM2_011, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWUB000000000
VERSION     NZ_JBSWUB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862021
            Assembly: GCF_056158845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Priestia sp. ABM2_011
  ORGANISM  Priestia sp. ABM2_011
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Priestia.
REFERENCE   1  (bases 1 to 5144494)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWUB000000000.1.
            The Priestia sp. ABM2_011 whole genome shotgun (WGS) project has
            the project accession NZ_JBSWUB000000000.  This version of the
            project (01) has the accession number NZ_JBSWUB010000000, and
            consists of sequences JBSWUB010000001-JBSWUB010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 681x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056158845.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:14:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,386
            CDSs (total)                      :: 5,227
            Genes (coding)                    :: 5,123
            CDSs (with protein)               :: 5,123
            Genes (RNA)                       :: 159
            rRNAs                             :: 13, 12, 13 (5S, 16S, 23S)
            complete rRNAs                    :: 13, 12, 12 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 115
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 104
            CDSs (without protein)            :: 104
            Pseudo Genes (ambiguous residues) :: 0 of 104
            Pseudo Genes (frameshifted)       :: 55 of 104
            Pseudo Genes (incomplete)         :: 45 of 104
            Pseudo Genes (internal stop)      :: 16 of 104
            Pseudo Genes (multiple problems)  :: 12 of 104
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5144494
                     /organism="Priestia sp. ABM2_011"
                     /mol_type="genomic DNA"
                     /strain="ABM2_011"
                     /isolation_source="Marine"
                     /db_xref="taxon:3466040"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWUB010000001-JBSWUB010000002
WGS_SCAFLD  NZ_JBSWUB010000001-NZ_JBSWUB010000002
//
LOCUS       NZ_JBRFLJ010000000   5930414 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas syringae pv. syringae strain BC-0253, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JBRFLJ000000000
VERSION     NZ_JBRFLJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51205843
            Assembly: GCF_056155825.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas syringae pv. syringae
  ORGANISM  Pseudomonas syringae pv. syringae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas
            syringae.
REFERENCE   1  (bases 1 to 5930414)
  AUTHORS   Nunez,P., Apablaza,H., Morales,C. and Ortega,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-SEP-2025) Research and development, Agroadvance spa.,
            Camino a Melipilla 26200, Santiago, RM 9750000, Chile
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRFLJ000000000.1.
            The Pseudomonas syringae pv. syringae whole genome shotgun (WGS)
            project has the project accession NZ_JBRFLJ000000000.  This version
            of the project (01) has the accession number NZ_JBRFLJ010000000,
            and consists of sequence JBRFLJ010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Agroadvance R&D.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2025
            Assembly Method        :: Flye v. 2.9.6
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 106.0x
            Sequencing Technology  :: Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155825.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:29:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,168
            CDSs (total)                      :: 5,083
            Genes (coding)                    :: 4,960
            CDSs (with protein)               :: 4,960
            Genes (RNA)                       :: 85
            rRNAs                             :: 6, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 35 of 123
            Pseudo Genes (incomplete)         :: 110 of 123
            Pseudo Genes (internal stop)      :: 13 of 123
            Pseudo Genes (multiple problems)  :: 32 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5930414
                     /organism="Pseudomonas syringae pv. syringae"
                     /mol_type="genomic DNA"
                     /strain="BC-0253"
                     /isolation_source="buds"
                     /host="Corylus avellana"
                     /db_xref="taxon:321"
                     /geo_loc_name="Chile: Region del Maule"
                     /collection_date="2024"
WGS         JBRFLJ010000001
WGS_SCAFLD  NZ_CM149579
//
LOCUS       NZ_JBSWYX010000000   5868807 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salipiger sp. ABF4_146, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWYX000000000
VERSION     NZ_JBSWYX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861882
            Assembly: GCF_056161345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salipiger sp. ABF4_146
  ORGANISM  Salipiger sp. ABF4_146
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (bases 1 to 5868807)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWYX000000000.1.
            The Salipiger sp. ABF4_146 whole genome shotgun (WGS) project has
            the project accession NZ_JBSWYX000000000.  This version of the
            project (01) has the accession number NZ_JBSWYX010000000, and
            consists of sequences JBSWYX010000001-JBSWYX010000095.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 221x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161345.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:06:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,541
            CDSs (total)                      :: 5,488
            Genes (coding)                    :: 5,410
            CDSs (with protein)               :: 5,410
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 78
            CDSs (without protein)            :: 78
            Pseudo Genes (ambiguous residues) :: 0 of 78
            Pseudo Genes (frameshifted)       :: 25 of 78
            Pseudo Genes (incomplete)         :: 61 of 78
            Pseudo Genes (internal stop)      :: 14 of 78
            Pseudo Genes (multiple problems)  :: 19 of 78
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5868807
                     /organism="Salipiger sp. ABF4_146"
                     /mol_type="genomic DNA"
                     /strain="ABF4_146"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477782"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWYX010000001-JBSWYX010000095
WGS_SCAFLD  NZ_JBSWYX010000001-NZ_JBSWYX010000095
//
LOCUS       NZ_JBRFLK010000000   5958126 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas syringae pv. syringae strain BC-0269, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JBRFLK000000000
VERSION     NZ_JBRFLK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51205886
            Assembly: GCF_056155845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas syringae pv. syringae
  ORGANISM  Pseudomonas syringae pv. syringae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas
            syringae.
REFERENCE   1  (bases 1 to 5958126)
  AUTHORS   Nunez,P., Apablaza,H., Morales,C. and Ortega,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-SEP-2025) Research and development, Agroadvance spa.,
            Camino a Melipilla 26200, Santiago, RM 9750000, Chile
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRFLK000000000.1.
            The Pseudomonas syringae pv. syringae whole genome shotgun (WGS)
            project has the project accession NZ_JBRFLK000000000.  This version
            of the project (01) has the accession number NZ_JBRFLK010000000,
            and consists of sequence JBRFLK010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Agroadvance R&D.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2025
            Assembly Method        :: Flye v. 2.9.6
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 145.0x
            Sequencing Technology  :: Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155845.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:42:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,192
            CDSs (total)                      :: 5,108
            Genes (coding)                    :: 5,021
            CDSs (with protein)               :: 5,021
            Genes (RNA)                       :: 84
            rRNAs                             :: 6, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 87
            CDSs (without protein)            :: 87
            Pseudo Genes (ambiguous residues) :: 0 of 87
            Pseudo Genes (frameshifted)       :: 18 of 87
            Pseudo Genes (incomplete)         :: 71 of 87
            Pseudo Genes (internal stop)      :: 11 of 87
            Pseudo Genes (multiple problems)  :: 13 of 87
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5958126
                     /organism="Pseudomonas syringae pv. syringae"
                     /mol_type="genomic DNA"
                     /strain="BC-0269"
                     /isolation_source="buds"
                     /host="Corylus avellana"
                     /db_xref="taxon:321"
                     /geo_loc_name="Chile: Region del Maule"
                     /collection_date="2024"
WGS         JBRFLK010000001
WGS_SCAFLD  NZ_CM149580
//
LOCUS       NZ_JBSWTF010000000   6459177 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Photobacterium sp. AWH4_225, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWTF000000000
VERSION     NZ_JBSWTF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862045
            Assembly: GCF_056158405.1
KEYWORDS    WGS; RefSeq.
SOURCE      Photobacterium sp. AWH4_225
  ORGANISM  Photobacterium sp. AWH4_225
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Photobacterium.
REFERENCE   1  (bases 1 to 6459177)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWTF000000000.1.
            The Photobacterium sp. AWH4_225 whole genome shotgun (WGS) project
            has the project accession NZ_JBSWTF000000000.  This version of the
            project (01) has the accession number NZ_JBSWTF010000000, and
            consists of sequences JBSWTF010000001-JBSWTF010000006.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 650x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056158405.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:15:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,907
            CDSs (total)                      :: 5,707
            Genes (coding)                    :: 5,673
            CDSs (with protein)               :: 5,673
            Genes (RNA)                       :: 200
            rRNAs                             :: 13, 12, 12 (5S, 16S, 23S)
            complete rRNAs                    :: 13, 8, 12 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (16S)
            tRNAs                             :: 159
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 9 of 34
            Pseudo Genes (incomplete)         :: 27 of 34
            Pseudo Genes (internal stop)      :: 2 of 34
            Pseudo Genes (multiple problems)  :: 4 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6459177
                     /organism="Photobacterium sp. AWH4_225"
                     /mol_type="genomic DNA"
                     /strain="AWH4_225"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477697"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-10-31"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWTF010000001-JBSWTF010000006
WGS_SCAFLD  NZ_JBSWTF010000001-NZ_JBSWTF010000006
//
LOCUS       NZ_JBRFLL010000000   6307252 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas fragariae (ex Marin et al. 2024) strain BC-0729, whole
            genome shotgun sequencing project.
ACCESSION   NZ_JBRFLL000000000
VERSION     NZ_JBRFLL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51206009
            Assembly: GCF_056155865.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas fragariae (ex Marin et al. 2024)
  ORGANISM  Pseudomonas fragariae (ex Marin et al. 2024)
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6307252)
  AUTHORS   Nunez,P., Apablaza,H., Morales,C. and Ortega,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-SEP-2025) Research and development, Agroadvance spa.,
            Camino a Melipilla 26200, Santiago, RM 9750000, Chile
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRFLL000000000.1.
            The Pseudomonas fragariae (ex Marin et al. 2024) whole genome
            shotgun (WGS) project has the project accession NZ_JBRFLL000000000.
            This version of the project (01) has the accession number
            NZ_JBRFLL010000000, and consists of sequence JBRFLL010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Agroadvance R&D.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2025
            Assembly Method        :: Flye v. 2.9.6
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 118.0x
            Sequencing Technology  :: Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155865.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:49:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,527
            CDSs (total)                      :: 5,443
            Genes (coding)                    :: 5,291
            CDSs (with protein)               :: 5,291
            Genes (RNA)                       :: 84
            rRNAs                             :: 6, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 152
            CDSs (without protein)            :: 152
            Pseudo Genes (ambiguous residues) :: 0 of 152
            Pseudo Genes (frameshifted)       :: 48 of 152
            Pseudo Genes (incomplete)         :: 119 of 152
            Pseudo Genes (internal stop)      :: 27 of 152
            Pseudo Genes (multiple problems)  :: 34 of 152
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6307252
                     /organism="Pseudomonas fragariae (ex Marin et al. 2024)"
                     /mol_type="genomic DNA"
                     /strain="BC-0729"
                     /isolation_source="flower"
                     /host="Prunus avium"
                     /db_xref="taxon:3080056"
                     /geo_loc_name="Chile: Region de O'higgins"
                     /collection_date="2024"
WGS         JBRFLL010000001
WGS_SCAFLD  NZ_CM149581
//
LOCUS       NZ_AZWO01000000      5865847 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salinispora pacifica CNR114, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AZWO00000000
VERSION     NZ_AZWO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02597245
            Assembly: GCF_000514775.1
KEYWORDS    WGS; IMPROVED_HIGH_QUALITY_DRAFT; RefSeq.
SOURCE      Salinispora pacifica CNR114
  ORGANISM  Salinispora pacifica CNR114
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Micromonosporales; Micromonosporaceae; Salinispora.
REFERENCE   1  (bases 1 to 5865847)
  AUTHORS   Jensen,P., Huntemann,M., Han,J., Chen,A., Kyrpides,N.,
            Mavromatis,K., Markowitz,V., Palaniappan,K., Ivanova,N.,
            Schaumberg,A., Pati,A., Liolios,K., Nordberg,H.P., Cantor,M.N.,
            Hua,S.X. and Woyke,T.
  CONSRTM   DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (20-DEC-2013) DOE Joint Genome Institute, 2800 Mitchell
            Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AZWO00000000.1.
            The Salinispora pacifica CNR114 whole genome shotgun (WGS) project
            has the project accession NZ_AZWO00000000.  This version of the
            project (01) has the accession number NZ_AZWO01000000, and consists
            of sequences AZWO01000001-AZWO01000101.
            URL -- http://www.jgi.doe.gov
            JGI Project ID: 407416
            Source DNA and Organism available from Paul  Jensen
            (pjensen@ucsd.edu)
            Source DNA available from Paul  Jensen (pjensen@ucsd.edu)
            Organism available from Paul  Jensen (pjensen@ucsd.edu)
            Contacts: Paul  Jensen (pjensen@ucsd.edu)
                      Tanja Woyke (microbe@cuba.jgi-psf.org)
            Whole genome sequencing and draft assembly at JGI-PGF
            Annotation by JGI-ORNL
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376)
            Full annotations are available from IMG.
            
            ##MIGS-Data-START##
            assembly           :: Velvet v. 1.1.04; ALLPATHS v. R41043
            investigation_type :: bacteria_archaea
            project_name       :: Salinispora pacifica CNR114
            sequencing_meth    :: WGS
            GOLD Stamp ID      :: Gi14634
            Funding Program    :: DOE-CSP-ICBG 2011
            Isolation Site     :: Microbial mats
            Gram Staining      :: Gram+
            ##MIGS-Data-END##
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: Improved High-Quality Draft
            Current Finishing Status :: Improved High-Quality Draft
            Assembly Method          :: Velvet v. 1.1.04; ALLPATHS v. R41043
            Genome Coverage          :: Unknown
            Sequencing Technology    :: Unknown
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000514775.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:16:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,536
            CDSs (total)                      :: 5,469
            Genes (coding)                    :: 5,229
            CDSs (with protein)               :: 5,229
            Genes (RNA)                       :: 67
            rRNAs                             :: 3, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 3, 4 (16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 240
            CDSs (without protein)            :: 240
            Pseudo Genes (ambiguous residues) :: 1 of 240
            Pseudo Genes (frameshifted)       :: 82 of 240
            Pseudo Genes (incomplete)         :: 198 of 240
            Pseudo Genes (internal stop)      :: 15 of 240
            Pseudo Genes (multiple problems)  :: 52 of 240
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5865847
                     /organism="Salinispora pacifica CNR114"
                     /mol_type="genomic DNA"
                     /strain="CNR114"
                     /isolation_source="not provided; submitted under MIGS 2.1"
                     /type_material="type strain of Salinispora pacifica"
                     /db_xref="taxon:1137260"
WGS         AZWO01000001-AZWO01000101
WGS_SCAFLD  NZ_AZWO01000001
WGS_SCAFLD  NZ_AZWO01000004-NZ_AZWO01000008
WGS_SCAFLD  NZ_AZWO01000011-NZ_AZWO01000101
WGS_SCAFLD  NZ_KI911467-NZ_KI911468
//
LOCUS       NZ_JBSWVV010000000   3811433 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Paracoccus homiensis strain ABL3_022, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSWVV000000000
VERSION     NZ_JBSWVV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861966
            Assembly: GCF_056159745.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paracoccus homiensis
  ORGANISM  Paracoccus homiensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Paracoccus.
REFERENCE   1  (bases 1 to 3811433)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWVV000000000.1.
            The Paracoccus homiensis whole genome shotgun (WGS) project has the
            project accession NZ_JBSWVV000000000.  This version of the project
            (01) has the accession number NZ_JBSWVV010000000, and consists of
            sequences JBSWVV010000001-JBSWVV010000055.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 999x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056159745.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:13:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,755
            CDSs (total)                      :: 3,704
            Genes (coding)                    :: 3,652
            CDSs (with protein)               :: 3,652
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 24 of 52
            Pseudo Genes (incomplete)         :: 35 of 52
            Pseudo Genes (internal stop)      :: 12 of 52
            Pseudo Genes (multiple problems)  :: 16 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3811433
                     /organism="Paracoccus homiensis"
                     /mol_type="genomic DNA"
                     /strain="ABL3_022"
                     /isolation_source="Marine"
                     /db_xref="taxon:364199"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-07-26"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWVV010000001-JBSWVV010000055
WGS_SCAFLD  NZ_JBSWVV010000001-NZ_JBSWVV010000055
//
LOCUS       NZ_JBVTTX010000000   4036479 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas sp. TS_SC_3, whole genome shotgun sequencing project.
ACCESSION   NZ_JBVTTX000000000
VERSION     NZ_JBVTTX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52016221
            Assembly: GCF_056156225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas sp. TS_SC_3
  ORGANISM  Pseudomonas sp. TS_SC_3
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 4036479)
  AUTHORS   Chatterjee,S., Dutta,S. and Ghosh,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-JAN-2026) Department of Biological Sciences, Bose
            Institute, Salt Lake, EN Block, Sector V, Kolkata 700091, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBVTTX000000000.1.
            The Pseudomonas sp. TS_SC_3 whole genome shotgun (WGS) project has
            the project accession NZ_JBVTTX000000000.  This version of the
            project (01) has the accession number NZ_JBVTTX010000000, and
            consists of sequence JBVTTX010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.5.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 285.73x
            Sequencing Technology  :: Illumina; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056156225.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:25:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,804
            CDSs (total)                      :: 3,710
            Genes (coding)                    :: 3,641
            CDSs (with protein)               :: 3,641
            Genes (RNA)                       :: 94
            rRNAs                             :: 7, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 14 of 69
            Pseudo Genes (incomplete)         :: 61 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 10 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4036479
                     /organism="Pseudomonas sp. TS_SC_3"
                     /mol_type="genomic DNA"
                     /strain="TS_SC_3"
                     /isolation_source="TsoMoriri Lake Sediment"
                     /db_xref="taxon:3466784"
                     /geo_loc_name="India: TsoMoriri Lake, Ladakh"
                     /collection_date="2021-10-28"
WGS         JBVTTX010000001
WGS_SCAFLD  NZ_CM149586
//
LOCUS       NZ_JBSWWQ010000000   6358778 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Photobacterium sp. ABD4_091, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWWQ000000000
VERSION     NZ_JBSWWQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861942
            Assembly: GCF_056160145.1
KEYWORDS    WGS; RefSeq.
SOURCE      Photobacterium sp. ABD4_091
  ORGANISM  Photobacterium sp. ABD4_091
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Photobacterium.
REFERENCE   1  (bases 1 to 6358778)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWWQ000000000.1.
            The Photobacterium sp. ABD4_091 whole genome shotgun (WGS) project
            has the project accession NZ_JBSWWQ000000000.  This version of the
            project (01) has the accession number NZ_JBSWWQ010000000, and
            consists of sequences JBSWWQ010000001-JBSWWQ010000026.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 423x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056160145.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:38:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,819
            CDSs (total)                      :: 5,589
            Genes (coding)                    :: 5,524
            CDSs (with protein)               :: 5,524
            Genes (RNA)                       :: 230
            rRNAs                             :: 14, 16, 16 (5S, 16S, 23S)
            complete rRNAs                    :: 14, 13, 13 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 3 (16S, 23S)
            tRNAs                             :: 179
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 22 of 65
            Pseudo Genes (incomplete)         :: 43 of 65
            Pseudo Genes (internal stop)      :: 7 of 65
            Pseudo Genes (multiple problems)  :: 7 of 65
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6358778
                     /organism="Photobacterium sp. ABD4_091"
                     /mol_type="genomic DNA"
                     /strain="ABD4_091"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477745"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWWQ010000001-JBSWWQ010000026
WGS_SCAFLD  NZ_JBSWWQ010000001-NZ_JBSWWQ010000026
//
LOCUS       NZ_JBSWUY010000000   5643359 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas luteola strain ABV4_182, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSWUY000000000
VERSION     NZ_JBSWUY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861993
            Assembly: GCF_056159305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas luteola
  ORGANISM  Pseudomonas luteola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 5643359)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWUY000000000.1.
            The Pseudomonas luteola whole genome shotgun (WGS) project has the
            project accession NZ_JBSWUY000000000.  This version of the project
            (01) has the accession number NZ_JBSWUY010000000, and consists of
            sequences JBSWUY010000001-JBSWUY010000005.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 855x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056159305.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:22:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,351
            CDSs (total)                      :: 5,258
            Genes (coding)                    :: 5,146
            CDSs (with protein)               :: 5,146
            Genes (RNA)                       :: 93
            rRNAs                             :: 7, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 112
            CDSs (without protein)            :: 112
            Pseudo Genes (ambiguous residues) :: 0 of 112
            Pseudo Genes (frameshifted)       :: 33 of 112
            Pseudo Genes (incomplete)         :: 84 of 112
            Pseudo Genes (internal stop)      :: 19 of 112
            Pseudo Genes (multiple problems)  :: 20 of 112
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5643359
                     /organism="Pseudomonas luteola"
                     /mol_type="genomic DNA"
                     /strain="ABV4_182"
                     /isolation_source="Marine"
                     /db_xref="taxon:47886"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-07-26"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWUY010000001-JBSWUY010000005
WGS_SCAFLD  NZ_JBSWUY010000001-NZ_JBSWUY010000005
//
LOCUS       NZ_JBSYFZ010000000   5675042 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas mosselii strain PhMP1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSYFZ000000000
VERSION     NZ_JBSYFZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53089019
            Assembly: GCF_056161405.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas mosselii
  ORGANISM  Pseudomonas mosselii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 5675042)
  AUTHORS   Shahi,N., Mallik,S.K., Rathore,R., Bisht,M.S. and Singh,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-DEC-2025) Diagnostic Bacteriology Laboratory,
            ICAR-Central Institute of Coldwater Fisheries Research, Dr Neetu
            Shahi, Bhimtal, Uttarakhand 263136, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSYFZ000000000.1.
            The Pseudomonas mosselii whole genome shotgun (WGS) project has the
            project accession NZ_JBSYFZ000000000.  This version of the project
            (01) has the accession number NZ_JBSYFZ010000000, and consists of
            sequences JBSYFZ010000001-JBSYFZ010000063.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from DBL, ICAR-CICFR, Bhimtal.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 20-MAR-2025
            Assembly Method        :: SPAdes v. 4.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50.0x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161405.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:07:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,195
            CDSs (total)                      :: 5,122
            Genes (coding)                    :: 5,042
            CDSs (with protein)               :: 5,042
            Genes (RNA)                       :: 73
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 65
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 80
            CDSs (without protein)            :: 80
            Pseudo Genes (ambiguous residues) :: 0 of 80
            Pseudo Genes (frameshifted)       :: 16 of 80
            Pseudo Genes (incomplete)         :: 70 of 80
            Pseudo Genes (internal stop)      :: 3 of 80
            Pseudo Genes (multiple problems)  :: 9 of 80
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5675042
                     /organism="Pseudomonas mosselii"
                     /mol_type="genomic DNA"
                     /strain="PhMP1"
                     /isolation_source="Mouth"
                     /host="Pangasius"
                     /db_xref="taxon:78327"
                     /geo_loc_name="India"
                     /altitude="246 m"
                     /collection_date="2024-12"
                     /collected_by="Neetu"
                     /identified_by="Neetu Shahi"
WGS         JBSYFZ010000001-JBSYFZ010000063
WGS_SCAFLD  NZ_JBSYFZ010000001-NZ_JBSYFZ010000063
//
LOCUS       NZ_JBSWWX010000000   4955341 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Planctobacterium sp. AWM4_229, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWWX000000000
VERSION     NZ_JBSWWX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861935
            Assembly: GCF_056160305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Planctobacterium sp. AWM4_229
  ORGANISM  Planctobacterium sp. AWM4_229
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Alteromonadaceae; Planctobacterium.
REFERENCE   1  (bases 1 to 4955341)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWWX000000000.1.
            The Planctobacterium sp. AWM4_229 whole genome shotgun (WGS)
            project has the project accession NZ_JBSWWX000000000.  This version
            of the project (01) has the accession number NZ_JBSWWX010000000,
            and consists of sequences JBSWWX010000001-JBSWWX010000041.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 164x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056160305.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:38:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,429
            CDSs (total)                      :: 4,364
            Genes (coding)                    :: 4,341
            CDSs (with protein)               :: 4,341
            Genes (RNA)                       :: 65
            rRNAs                             :: 5, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 4, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 23
            CDSs (without protein)            :: 23
            Pseudo Genes (ambiguous residues) :: 0 of 23
            Pseudo Genes (frameshifted)       :: 3 of 23
            Pseudo Genes (incomplete)         :: 17 of 23
            Pseudo Genes (internal stop)      :: 5 of 23
            Pseudo Genes (multiple problems)  :: 1 of 23
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4955341
                     /organism="Planctobacterium sp. AWM4_229"
                     /mol_type="genomic DNA"
                     /strain="AWM4_229"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477750"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-10-31"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWWX010000001-JBSWWX010000041
WGS_SCAFLD  NZ_JBSWWX010000001-NZ_JBSWWX010000041
//
LOCUS       NZ_JBSWYN010000000   5406621 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Priestia sp. ABX4_074, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWYN000000000
VERSION     NZ_JBSWYN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861892
            Assembly: GCF_056161125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Priestia sp. ABX4_074
  ORGANISM  Priestia sp. ABX4_074
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Priestia.
REFERENCE   1  (bases 1 to 5406621)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWYN000000000.1.
            The Priestia sp. ABX4_074 whole genome shotgun (WGS) project has
            the project accession NZ_JBSWYN000000000.  This version of the
            project (01) has the accession number NZ_JBSWYN010000000, and
            consists of sequences JBSWYN010000001-JBSWYN010000067.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 184x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161125.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:57:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,724
            CDSs (total)                      :: 5,554
            Genes (coding)                    :: 5,496
            CDSs (with protein)               :: 5,496
            Genes (RNA)                       :: 170
            rRNAs                             :: 20, 12, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 6 (5S)
            partial rRNAs                     :: 14, 12, 9 (5S, 16S, 23S)
            tRNAs                             :: 123
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 58
            CDSs (without protein)            :: 58
            Pseudo Genes (ambiguous residues) :: 0 of 58
            Pseudo Genes (frameshifted)       :: 11 of 58
            Pseudo Genes (incomplete)         :: 42 of 58
            Pseudo Genes (internal stop)      :: 12 of 58
            Pseudo Genes (multiple problems)  :: 7 of 58
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5406621
                     /organism="Priestia sp. ABX4_074"
                     /mol_type="genomic DNA"
                     /strain="ABX4_074"
                     /isolation_source="Marine"
                     /db_xref="taxon:3466039"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWYN010000001-JBSWYN010000067
WGS_SCAFLD  NZ_JBSWYN010000001-NZ_JBSWYN010000067
//
LOCUS       NZ_CAEL01000000      1816348 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Peptoniphilus senegalensis JC140 strain type strain: JC140, whole
            genome shotgun sequencing project.
ACCESSION   NZ_CAEL00000000
VERSION     NZ_CAEL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA2272315
            Assembly: GCF_000321025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Peptoniphilus senegalensis JC140
  ORGANISM  Peptoniphilus senegalensis JC140
            Bacteria; Bacillati; Bacillota; Tissierellia; Tissierellales;
            Peptoniphilaceae; Peptoniphilus.
REFERENCE   1
  AUTHORS   Million,M.M., Armougom,F.A., Lagier,J.C., Pagnier,I.P.,
            Robert,C.R., Bittar,F.B., Henry,M.H., Leroy,Q.L., Fournous,G.F.,
            Gimenez,G.G., Dridi,B.D., Trape,J.F.T., La Scola,B.L.,
            Drancourt,M.D. and Raoult,D.R.
  TITLE     Microbial culturomics: the african gut microbiota paradigm
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1816348)
  AUTHORS   ARMOUGOM,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JUL-2011) URMITE, CNRS UMR6236 IRD, 27 bld jean
            Moulin, 13005, FRANCE
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAEL00000000.1.
            The Peptoniphilus senegalensis JC140 whole genome shotgun (WGS)
            project has the project accession NZ_CAEL00000000.  This version of
            the project (01) has the accession number NZ_CAEL01000000, and
            consists of sequences CAEL01000001-CAEL01000064.
            454 FLX titanium and de novo assembly using newbler.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000321025.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:16:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,796
            CDSs (total)                      :: 1,748
            Genes (coding)                    :: 1,720
            CDSs (with protein)               :: 1,720
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1, 6 (5S, 23S)
            tRNAs                             :: 35
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 10 of 28
            Pseudo Genes (incomplete)         :: 16 of 28
            Pseudo Genes (internal stop)      :: 3 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1816348
                     /organism="Peptoniphilus senegalensis JC140"
                     /mol_type="genomic DNA"
                     /strain="type strain: JC140"
                     /isolation_source="host stool sample"
                     /host="Homo sapiens"
                     /type_material="type strain of Peptoniphilus senegalensis"
                     /db_xref="taxon:1033744"
                     /geo_loc_name="Senegal"
WGS         CAEL01000001-CAEL01000064
WGS_SCAFLD  NZ_CAEL01000040-NZ_CAEL01000064
WGS_SCAFLD  NZ_HE610717-NZ_HE610720
//
LOCUS       NZ_JBSPCY010000000   7015241 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas protegens strain Pf4, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSPCY000000000
VERSION     NZ_JBSPCY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53311908
            Assembly: GCF_056161465.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas protegens
  ORGANISM  Pseudomonas protegens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7015241)
  AUTHORS   Castiglione,A.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-NOV-2025) R&D, Green Has Italia S.P.A, Corso Alba 89,
            Canale, CN 12043, Italy
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSPCY000000000.1.
            The Pseudomonas protegens whole genome shotgun (WGS) project has
            the project accession NZ_JBSPCY000000000.  This version of the
            project (01) has the accession number NZ_JBSPCY010000000, and
            consists of sequences JBSPCY010000001-JBSPCY010000011.
            Bacteria and source DNA available from Green Has Italia,
            Microbiology Unit, Corso Alba 89, 12043 Canale, CN.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161465.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:11:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,446
            CDSs (total)                      :: 6,376
            Genes (coding)                    :: 6,300
            CDSs (with protein)               :: 6,300
            Genes (RNA)                       :: 70
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 13 of 76
            Pseudo Genes (incomplete)         :: 67 of 76
            Pseudo Genes (internal stop)      :: 3 of 76
            Pseudo Genes (multiple problems)  :: 6 of 76
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7015241
                     /organism="Pseudomonas protegens"
                     /mol_type="genomic DNA"
                     /strain="Pf4"
                     /isolation_source="soil"
                     /db_xref="taxon:380021"
                     /geo_loc_name="Italy: Savona"
                     /collection_date="2013-06"
                     /collected_by="Dipartimento Scienze Ambientali e Vita -
                     Universita degli Studi del Piemonte Orientale Amedeo
                     Avogadro"
WGS         JBSPCY010000001-JBSPCY010000011
WGS_SCAFLD  NZ_JBSPCY010000001-NZ_JBSPCY010000011
//
LOCUS       NZ_JBJKIV010000000   4725701 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S42, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKIV000000000
VERSION     NZ_JBJKIV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026101
            Assembly: GCF_045504915.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4725701)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKIV000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJKIV000000000.  This version of the project
            (01) has the accession number NZ_JBJKIV010000000, and consists of
            sequences JBJKIV010000001-JBJKIV010000039.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Duck.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045504915.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:11:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,668
            CDSs (total)                      :: 4,573
            Genes (coding)                    :: 4,381
            CDSs (with protein)               :: 4,381
            Genes (RNA)                       :: 95
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 77
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 192
            CDSs (without protein)            :: 192
            Pseudo Genes (ambiguous residues) :: 0 of 192
            Pseudo Genes (frameshifted)       :: 71 of 192
            Pseudo Genes (incomplete)         :: 136 of 192
            Pseudo Genes (internal stop)      :: 33 of 192
            Pseudo Genes (multiple problems)  :: 43 of 192
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4725701
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S42"
                     /host="duck"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Liaocheng"
                     /collection_date="2021-01-06"
WGS         JBJKIV010000001-JBJKIV010000039
WGS_SCAFLD  NZ_JBJKIV010000001-NZ_JBJKIV010000039
//
LOCUS       NZ_JYOO01000000      5095483 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Priestia aryabhattai B8W22, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JYOO00000000
VERSION     NZ_JYOO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03159255
            Assembly: GCF_000956595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Priestia aryabhattai B8W22
  ORGANISM  Priestia aryabhattai B8W22
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Priestia.
REFERENCE   1  (bases 1 to 5095483)
  AUTHORS   Shivaji,S., Chaturvedi,P., Begum,Z., Pindi,P.K., Manorama,R.,
            Padmanaban,D.A., Shouche,Y.S., Pawar,S., Vaishampayan,P.,
            Dutt,C.B., Datta,G.N., Manchanda,R.K., Rao,U.R., Bhargava,P.M. and
            Narlikar,J.V.
  TITLE     Janibacter hoylei sp. nov., Bacillus isronensis sp. nov. and
            Bacillus aryabhattai sp. nov., isolated from cryotubes used for
            collecting air from the upper atmosphere
  JOURNAL   Int J Syst Evol Microbiol 59 (Pt 12), 2977-2986 (2009)
   PUBMED   19643890
REFERENCE   2  (bases 1 to 5095483)
  AUTHORS   Shivaji,S., Ara,S. and Reddy,G.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-FEB-2015) CCMB, Centre for Cellular and Molecular
            Biology, Uppal Road, Hyderabad, Andhra Pradesh 500 007, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JYOO00000000.1.
            The Priestia aryabhattai B8W22 whole genome shotgun (WGS) project
            has the project accession NZ_JYOO00000000.  This version of the
            project (01) has the accession number NZ_JYOO01000000, and consists
            of sequences JYOO01000001-JYOO01000072.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: SEP-2014
            Assembly Method        :: GS De Novo Assembler v. 2.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 17.8x
            Sequencing Technology  :: 454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000956595.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:50:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,334
            CDSs (total)                      :: 5,243
            Genes (coding)                    :: 5,129
            CDSs (with protein)               :: 5,129
            Genes (RNA)                       :: 91
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 114
            CDSs (without protein)            :: 114
            Pseudo Genes (ambiguous residues) :: 0 of 114
            Pseudo Genes (frameshifted)       :: 76 of 114
            Pseudo Genes (incomplete)         :: 45 of 114
            Pseudo Genes (internal stop)      :: 7 of 114
            Pseudo Genes (multiple problems)  :: 12 of 114
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5095483
                     /organism="Priestia aryabhattai B8W22"
                     /mol_type="genomic DNA"
                     /strain="B8W22"
                     /isolation_source="high-altitude air sample"
                     /culture_collection="JCM:13839"
                     /culture_collection="MTCC:7755"
                     /type_material="type strain of Bacillus aryabhattai"
                     /db_xref="taxon:1358420"
                     /geo_loc_name="India: Hyderabad"
                     /collection_date="20-Apr-2005"
                     /collected_by="Dr. Shivaji"
                     /identified_by="Dr. Shivaji"
WGS         JYOO01000001-JYOO01000072
WGS_SCAFLD  NZ_JYOO01000001-NZ_JYOO01000072
//
LOCUS       NZ_JBJKIZ010000000   4725433 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S47, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKIZ000000000
VERSION     NZ_JBJKIZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026106
            Assembly: GCF_045504975.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4725433)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKIZ000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJKIZ000000000.  This version of the project
            (01) has the accession number NZ_JBJKIZ010000000, and consists of
            sequences JBJKIZ010000001-JBJKIZ010000044.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Chicken.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045504975.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:14:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,667
            CDSs (total)                      :: 4,574
            Genes (coding)                    :: 4,381
            CDSs (with protein)               :: 4,381
            Genes (RNA)                       :: 93
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 75
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 193
            CDSs (without protein)            :: 193
            Pseudo Genes (ambiguous residues) :: 0 of 193
            Pseudo Genes (frameshifted)       :: 71 of 193
            Pseudo Genes (incomplete)         :: 137 of 193
            Pseudo Genes (internal stop)      :: 33 of 193
            Pseudo Genes (multiple problems)  :: 43 of 193
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4725433
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S47"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Liaocheng"
                     /collection_date="2021-04-09"
WGS         JBJKIZ010000001-JBJKIZ010000044
WGS_SCAFLD  NZ_JBJKIZ010000001-NZ_JBJKIZ010000044
//
LOCUS       NZ_JPHU01000000      3354504 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Parvularcula oceani strain JLT2013, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JPHU00000000
VERSION     NZ_JPHU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02905868
            Assembly: GCF_000733125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Parvularcula oceani
  ORGANISM  Parvularcula oceani
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Parvularculales; Parvularculaceae; Parvularcula.
REFERENCE   1  (bases 1 to 3354504)
  AUTHORS   Tang,K.
  TITLE     Genome sequence of Parvularcula oceani,a marine bacterium encoding
            proteorhodopsin protein of the order 'Parvularculales'
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3354504)
  AUTHORS   Tang,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-JUL-2014) State Key Laboratory of Marine
            Environmental Science, College of Ocean and Earth Sciences, Xiamen
            University, Xiamen 361005, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JPHU00000000.1.
            The Parvularcula oceani whole genome shotgun (WGS) project has the
            project accession NZ_JPHU00000000.  This version of the project
            (01) has the accession number NZ_JPHU01000000, and consists of
            sequences JPHU01000001-JPHU01000038.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Newbler v. 2.8
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 25.0x
            Sequencing Technology  :: 454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000733125.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:28:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,207
            CDSs (total)                      :: 3,157
            Genes (coding)                    :: 3,114
            CDSs (with protein)               :: 3,114
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 12 of 43
            Pseudo Genes (incomplete)         :: 27 of 43
            Pseudo Genes (internal stop)      :: 11 of 43
            Pseudo Genes (multiple problems)  :: 6 of 43
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3354504
                     /organism="Parvularcula oceani"
                     /mol_type="genomic DNA"
                     /strain="JLT2013"
                     /isolation_source="deep sea water"
                     /type_material="type strain of Parvularcula oceani"
                     /db_xref="taxon:1247963"
                     /geo_loc_name="China: Southeastern Pacific"
                     /collection_date="2013"
WGS         JPHU01000001-JPHU01000038
WGS_SCAFLD  NZ_JPHU01000001-NZ_JPHU01000038
//
LOCUS       NZ_CDVDYJ010000000   4939256 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Paraglaciecola polaris isolate MarMAG_001912, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVDYJ000000000
VERSION     NZ_CDVDYJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737881
            Assembly: GCF_977660015.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Paraglaciecola polaris (marine metagenome)
  ORGANISM  Paraglaciecola polaris
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Alteromonadaceae; Paraglaciecola.
REFERENCE   1  (bases 1 to 4939256)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVDYJ000000000.1.
            The Paraglaciecola polaris whole genome shotgun (WGS) project has
            the project accession NZ_CDVDYJ000000000.  This version of the
            project (01) has the accession number NZ_CDVDYJ010000000, and
            consists of sequences CDVDYJ010000001-CDVDYJ010000042.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977660015.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:42:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,301
            CDSs (total)                      :: 4,248
            Genes (coding)                    :: 4,195
            CDSs (with protein)               :: 4,195
            Genes (RNA)                       :: 53
            tRNAs                             :: 50
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 53
            CDSs (without protein)            :: 53
            Pseudo Genes (ambiguous residues) :: 0 of 53
            Pseudo Genes (frameshifted)       :: 14 of 53
            Pseudo Genes (incomplete)         :: 39 of 53
            Pseudo Genes (internal stop)      :: 9 of 53
            Pseudo Genes (multiple problems)  :: 8 of 53
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4939256
                     /organism="Paraglaciecola polaris"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_001912"
                     /isolation_source="Pacific Ocean"
                     /db_xref="taxon:222814"
                     /environmental_sample
                     /geo_loc_name="Pacific Ocean"
                     /collection_date="2010-02-08"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVDYJ010000001-CDVDYJ010000042
WGS_SCAFLD  NZ_CDVDYJ010000001-NZ_CDVDYJ010000042
//
LOCUS       NZ_JBJLLE010000000   4843214 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S102, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLLE000000000
VERSION     NZ_JBJLLE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026126
            Assembly: GCF_045569765.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4843214)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLLE000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJLLE000000000.  This version of the project
            (01) has the accession number NZ_JBJLLE010000000, and consists of
            sequences JBJLLE010000001-JBJLLE010000034.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Chicken.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045569765.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:18:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,798
            CDSs (total)                      :: 4,717
            Genes (coding)                    :: 4,357
            CDSs (with protein)               :: 4,357
            Genes (RNA)                       :: 81
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 360
            CDSs (without protein)            :: 360
            Pseudo Genes (ambiguous residues) :: 0 of 360
            Pseudo Genes (frameshifted)       :: 179 of 360
            Pseudo Genes (incomplete)         :: 128 of 360
            Pseudo Genes (internal stop)      :: 112 of 360
            Pseudo Genes (multiple problems)  :: 51 of 360
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4843214
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S102"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Liaocheng"
                     /collection_date="2021-08-07"
WGS         JBJLLE010000001-JBJLLE010000034
WGS_SCAFLD  NZ_JBJLLE010000001-NZ_JBJLLE010000034
//
LOCUS       NZ_CDVJLH010000000   5612739 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Paraglaciecola chathamensis isolate MarMAG_085306, whole
            genome shotgun sequencing project.
ACCESSION   NZ_CDVJLH000000000
VERSION     NZ_CDVJLH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120738484
            Assembly: GCF_977697195.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Paraglaciecola chathamensis (marine metagenome)
  ORGANISM  Paraglaciecola chathamensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Alteromonadaceae; Paraglaciecola.
REFERENCE   1  (bases 1 to 5612739)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVJLH000000000.1.
            The Paraglaciecola chathamensis whole genome shotgun (WGS) project
            has the project accession NZ_CDVJLH000000000.  This version of the
            project (01) has the accession number NZ_CDVJLH010000000, and
            consists of sequences CDVJLH010000001-CDVJLH010000045.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977697195.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:41:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,876
            CDSs (total)                      :: 4,827
            Genes (coding)                    :: 4,771
            CDSs (with protein)               :: 4,771
            Genes (RNA)                       :: 49
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 56
            CDSs (without protein)            :: 56
            Pseudo Genes (ambiguous residues) :: 0 of 56
            Pseudo Genes (frameshifted)       :: 13 of 56
            Pseudo Genes (incomplete)         :: 36 of 56
            Pseudo Genes (internal stop)      :: 22 of 56
            Pseudo Genes (multiple problems)  :: 13 of 56
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5612739
                     /organism="Paraglaciecola chathamensis"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_085306"
                     /isolation_source="surface seawater"
                     /db_xref="taxon:368405"
                     /environmental_sample
                     /geo_loc_name="Costa Rica"
                     /collection_date="2005-07-01"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVJLH010000001-CDVJLH010000045
WGS_SCAFLD  NZ_CDVJLH010000001-NZ_CDVJLH010000045
//
LOCUS       NZ_AMPQ01000000      2712396 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salimicrobium jeotgali strain MJ3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AMPQ00000000
VERSION     NZ_AMPQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02469590
            Assembly: GCF_000299295.2
KEYWORDS    WGS; RefSeq.
SOURCE      Salimicrobium jeotgali
  ORGANISM  Salimicrobium jeotgali
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Salimicrobium.
REFERENCE   1  (bases 1 to 2712396)
  AUTHORS   Lee,S.H., Jung,J.Y. and Jeon,C.O.
  TITLE     Draft genome sequence of Salimicrobium sp. strain MJ3, isolated
            from Myulchi-Jeot, Korean fermented seafood
  JOURNAL   J Bacteriol 194 (23), 6695 (2012)
   PUBMED   23144427
REFERENCE   2  (bases 1 to 2712396)
  AUTHORS   Lee,S.H. and Jeon,C.O.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-SEP-2012) Department of Life Science, Chung-Ang
            University, 84, HeukSeok-Ro, Dongjak-Gu, Seoul 156-756, Republic of
            Korea
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AMPQ00000000.1.
            
            On Apr 7, 2016 this sequence version replaced gi:407798013.
            The Salimicrobium jeotgali whole genome shotgun (WGS) project has
            the project accession NZ_AMPQ00000000.  This version of the project
            (01) has the accession number NZ_AMPQ01000000, and consists of
            sequences AMPQ01000026-AMPQ01000045.
            Bacteria available from Korean Agricultural Culture Collection
            (KACC16972).
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: CLC Genomics Workbench v. 5.1; Celera
                                     Assembler v.7.0
            Genome Coverage       :: 472.53x
            Sequencing Technology :: Illumina Miseq; PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000299295.2-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:55:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,816
            CDSs (total)                      :: 2,742
            Genes (coding)                    :: 2,724
            CDSs (with protein)               :: 2,724
            Genes (RNA)                       :: 74
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 18
            CDSs (without protein)            :: 18
            Pseudo Genes (ambiguous residues) :: 0 of 18
            Pseudo Genes (frameshifted)       :: 6 of 18
            Pseudo Genes (incomplete)         :: 9 of 18
            Pseudo Genes (internal stop)      :: 8 of 18
            Pseudo Genes (multiple problems)  :: 5 of 18
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2712396
                     /organism="Salimicrobium jeotgali"
                     /mol_type="genomic DNA"
                     /strain="MJ3"
                     /isolation_source="Myulchi Jeot which is fermented anchovy
                     (Engraulis japonica) food"
                     /type_material="type strain of Salimicrobium jeotgali"
                     /db_xref="taxon:1230341"
                     /geo_loc_name="South Korea"
                     /collection_date="2012-02"
WGS         AMPQ01000001-AMPQ01000024
WGS         AMPQ01000026-AMPQ01000045
WGS_SCAFLD  NZ_AMPQ01000001-NZ_AMPQ01000024
WGS_SCAFLD  NZ_AMPQ01000026-NZ_AMPQ01000045
//
LOCUS       NZ_JBSPCZ010000000   7383887 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas sp. 5Vm1k, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSPCZ000000000
VERSION     NZ_JBSPCZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53311953
            Assembly: GCF_056161485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas sp. 5Vm1k
  ORGANISM  Pseudomonas sp. 5Vm1k
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7383887)
  AUTHORS   Castiglione,A.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-NOV-2025) R&D, Green Has Italia S.P.A, Corso Alba 89,
            Canale, CN 12043, Italy
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSPCZ000000000.1.
            The Pseudomonas sp. 5Vm1k whole genome shotgun (WGS) project has
            the project accession NZ_JBSPCZ000000000.  This version of the
            project (01) has the accession number NZ_JBSPCZ010000000, and
            consists of sequences JBSPCZ010000001-JBSPCZ010000039.
            Bacteria and source DNA available from Green Has Italia,
            Microbiology Unit, Corso Alba 89, 12043 Canale, CN.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161485.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:15:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,655
            CDSs (total)                      :: 6,588
            Genes (coding)                    :: 6,489
            CDSs (with protein)               :: 6,489
            Genes (RNA)                       :: 67
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 99
            CDSs (without protein)            :: 99
            Pseudo Genes (ambiguous residues) :: 0 of 99
            Pseudo Genes (frameshifted)       :: 28 of 99
            Pseudo Genes (incomplete)         :: 75 of 99
            Pseudo Genes (internal stop)      :: 14 of 99
            Pseudo Genes (multiple problems)  :: 15 of 99
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7383887
                     /organism="Pseudomonas sp. 5Vm1k"
                     /mol_type="genomic DNA"
                     /strain="5Vm1k"
                     /isolation_source="soil"
                     /db_xref="taxon:3471427"
                     /geo_loc_name="Italy"
                     /collection_date="2013-09"
                     /collected_by="DISIT Universita del Piemonte Orientale A.
                     Avogadro"
WGS         JBSPCZ010000001-JBSPCZ010000039
WGS_SCAFLD  NZ_JBSPCZ010000001-NZ_JBSPCZ010000039
//
LOCUS       NZ_QDDR01000000      5079942 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pararhodobacter aggregans strain D1-19, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QDDR00000000
VERSION     NZ_QDDR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08970498
            Assembly: GCF_003075525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pararhodobacter aggregans
  ORGANISM  Pararhodobacter aggregans
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Pararhodobacter.
REFERENCE   1  (bases 1 to 5079942)
  AUTHORS   Foesel,B.U., Drake,H.L. and Schramm,A.
  TITLE     Defluviimonas denitrificans gen. nov., sp. nov., and
            Pararhodobacter aggregans gen. nov., sp. nov., non-phototrophic
            Rhodobacteraceae from the biofilter of a marine aquaculture
  JOURNAL   Syst Appl Microbiol 34 (7), 498-502 (2011)
   PUBMED   21959289
REFERENCE   2  (bases 1 to 5079942)
  AUTHORS   Wang,X.-L. and Du,Z.-J.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-APR-2018) Marine College, Shandong University,
            Wenhuaxilu No. 180, Weihai 264209, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QDDR00000000.1.
            The Pararhodobacter aggregans whole genome shotgun (WGS) project
            has the project accession NZ_QDDR00000000.  This version of the
            project (01) has the accession number NZ_QDDR01000000, and consists
            of sequences QDDR01000001-QDDR01000032.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 210.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003075525.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:03:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,019
            CDSs (total)                      :: 4,965
            Genes (coding)                    :: 4,934
            CDSs (with protein)               :: 4,934
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 6 of 31
            Pseudo Genes (incomplete)         :: 25 of 31
            Pseudo Genes (internal stop)      :: 4 of 31
            Pseudo Genes (multiple problems)  :: 3 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5079942
                     /organism="Pararhodobacter aggregans"
                     /mol_type="genomic DNA"
                     /strain="D1-19"
                     /isolation_source="biofilter from a recirculating marine
                     aquaculture"
                     /type_material="type strain of Pararhodobacter aggregans"
                     /db_xref="taxon:404875"
                     /geo_loc_name="Israel: Rehovot"
                     /collection_date="2011-10-24"
WGS         QDDR01000001-QDDR01000032
WGS_SCAFLD  NZ_QDDR01000001-NZ_QDDR01000032
//
LOCUS       NZ_CBDBYE010000000   1726645 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pediococcus pentosaceus isolate Pediococcus pentosaceus VK-ES,
            whole genome shotgun sequencing project.
ACCESSION   NZ_CBDBYE000000000
VERSION     NZ_CBDBYE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117819816
            Assembly: GCF_965213305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pediococcus pentosaceus
  ORGANISM  Pediococcus pentosaceus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Pediococcus.
REFERENCE   1  (bases 1 to 1726645)
  AUTHORS   Kisand,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAR-2025) University of Tartu, Institute of
            Technology, Environmental Microbiology, Nooruse 1, 50411, Estonia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBDBYE000000000.1.
            The Pediococcus pentosaceus whole genome shotgun (WGS) project has
            the project accession NZ_CBDBYE000000000.  This version of the
            project (01) has the accession number NZ_CBDBYE010000000, and
            consists of sequences CBDBYE010000001-CBDBYE010000002.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_965213305.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 15:29:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,740
            CDSs (total)                      :: 1,666
            Genes (coding)                    :: 1,635
            CDSs (with protein)               :: 1,635
            Genes (RNA)                       :: 74
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 32
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 32
            Pseudo Genes (frameshifted)       :: 17 of 32
            Pseudo Genes (incomplete)         :: 7 of 32
            Pseudo Genes (internal stop)      :: 9 of 32
            Pseudo Genes (multiple problems)  :: 2 of 32
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1726645
                     /organism="Pediococcus pentosaceus"
                     /mol_type="genomic DNA"
                     /isolate="Pediococcus pentosaceus VK-ES"
                     /db_xref="taxon:1255"
                     /geo_loc_name="Turkey"
                     /collection_date="2021"
WGS         CBDBYE010000001-CBDBYE010000002
WGS_SCAFLD  NZ_CBDBYE010000001-NZ_CBDBYE010000002
//
LOCUS       NZ_JBJLKS010000000   4841412 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S59, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLKS000000000
VERSION     NZ_JBJLKS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026114
            Assembly: GCF_045566235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4841412)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLKS000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJLKS000000000.  This version of the project
            (01) has the accession number NZ_JBJLKS010000000, and consists of
            sequences JBJLKS010000001-JBJLKS010000060.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Goose.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045566235.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:22:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,831
            CDSs (total)                      :: 4,733
            Genes (coding)                    :: 4,574
            CDSs (with protein)               :: 4,574
            Genes (RNA)                       :: 98
            rRNAs                             :: 2, 2, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 5 (16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 159
            CDSs (without protein)            :: 159
            Pseudo Genes (ambiguous residues) :: 0 of 159
            Pseudo Genes (frameshifted)       :: 63 of 159
            Pseudo Genes (incomplete)         :: 110 of 159
            Pseudo Genes (internal stop)      :: 27 of 159
            Pseudo Genes (multiple problems)  :: 35 of 159
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4841412
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S59"
                     /host="goose"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Yantai"
                     /collection_date="2020-05-12"
WGS         JBJLKS010000001-JBJLKS010000060
WGS_SCAFLD  NZ_JBJLKS010000001-NZ_JBJLKS010000060
//
LOCUS       NZ_JBWBZN010000000   7008901 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas gorinensis strain NG1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWBZN000000000
VERSION     NZ_JBWBZN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56475372
            Assembly: GCF_056161525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas gorinensis
  ORGANISM  Pseudomonas gorinensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7008901)
  AUTHORS   Wilbourn,E.K., Humphrey,B., Lobitz,M., Ricken,J.B., Smallwood,C.,
            Cahill,J. and Davis,R.W.
  TITLE     Draft genome sequence of the putative plant growth-promoting
            bacterium Pseudomonas gorinensis strain NG1 isolated from a
            high-lipid algae strain
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7008901)
  AUTHORS   Wilbourn,E.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2026) Bioresource and Environmental Security,
            Sandia National Laboratories, 7011 East Ave, Livermore, CA 94550,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBZN000000000.1.
            The Pseudomonas gorinensis whole genome shotgun (WGS) project has
            the project accession NZ_JBWBZN000000000.  This version of the
            project (01) has the accession number NZ_JBWBZN010000000, and
            consists of sequence JBWBZN010000001.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 121.0x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161525.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:24:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,437
            CDSs (total)                      :: 6,352
            Genes (coding)                    :: 6,228
            CDSs (with protein)               :: 6,228
            Genes (RNA)                       :: 85
            rRNAs                             :: 6, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 124
            CDSs (without protein)            :: 124
            Pseudo Genes (ambiguous residues) :: 0 of 124
            Pseudo Genes (frameshifted)       :: 31 of 124
            Pseudo Genes (incomplete)         :: 97 of 124
            Pseudo Genes (internal stop)      :: 14 of 124
            Pseudo Genes (multiple problems)  :: 17 of 124
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7008901
                     /organism="Pseudomonas gorinensis"
                     /mol_type="genomic DNA"
                     /strain="NG1"
                     /isolation_source="Nannochloropsis gaditana culture"
                     /db_xref="taxon:3240790"
                     /geo_loc_name="USA: Albuquerque, New Mexico"
                     /collection_date="2025"
WGS         JBWBZN010000001
WGS_SCAFLD  NZ_CM149604
//
LOCUS       NZ_JBSAXK010000000   5944637 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas fluorescens strain Li1LvB1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSAXK000000000
VERSION     NZ_JBSAXK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50273551
            Assembly: GCF_056156685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas fluorescens
  ORGANISM  Pseudomonas fluorescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 5944637)
  AUTHORS   Knecht,C.A., Prack Mccormick,B., Alvarez,V.E., Buzzola,F.,
            Fuchs,J., Salgado,P., Campos,J., Quiroga,M.P. and Centron,D.
  TITLE     The use of glyphosate in agriculture contributes to the rise of
            species causing multidrug hospital-acquired infections
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5944637)
  AUTHORS   Knecht,C.A., Campos,J., Alvarez,V.E., Quiroga,M.P. and Centron,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JUL-2025) Institute of Research in Medical
            Microbiology and Parasitology, Universidad de Buenos Aires,
            CONICET, Paraguay 2155, Buenos Aires 1121, Argentina
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSAXK000000000.1.
            The Pseudomonas fluorescens whole genome shotgun (WGS) project has
            the project accession NZ_JBSAXK000000000.  This version of the
            project (01) has the accession number NZ_JBSAXK010000000, and
            consists of sequences JBSAXK010000001-JBSAXK010000085.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 302x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056156685.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:38:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,493
            CDSs (total)                      :: 5,431
            Genes (coding)                    :: 5,320
            CDSs (with protein)               :: 5,320
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 27 of 111
            Pseudo Genes (incomplete)         :: 81 of 111
            Pseudo Genes (internal stop)      :: 10 of 111
            Pseudo Genes (multiple problems)  :: 6 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5944637
                     /organism="Pseudomonas fluorescens"
                     /mol_type="genomic DNA"
                     /strain="Li1LvB1"
                     /isolation_source="sediment"
                     /db_xref="taxon:294"
                     /geo_loc_name="Argentina: Ramsar site at the Parana Delta"
                     /lat_lon="34.2228988 S 58.8975770 W"
                     /collection_date="2020-12"
WGS         JBSAXK010000001-JBSAXK010000085
WGS_SCAFLD  NZ_JBSAXK010000001-NZ_JBSAXK010000085
//
LOCUS       NZ_AQQX01000000      4938305 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudooceanicola atlanticus strain 22II-s11g, whole genome shotgun
            sequencing project.
ACCESSION   NZ_AQQX00000000
VERSION     NZ_AQQX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02954390
            Assembly: GCF_000768315.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudooceanicola atlanticus
  ORGANISM  Pseudooceanicola atlanticus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Pseudooceanicola.
REFERENCE   1  (bases 1 to 4938305)
  AUTHORS   Lai,Q., Li,G., Liu,X., Du,Y., Sun,F. and Shao,Z.
  TITLE     Pseudooceanicola atlanticus gen. nov. sp. nov., isolated from
            surface seawater of the Atlantic Ocean and reclassification of
            Oceanicola batsensis, Oceanicola marinus, Oceanicola
            nitratireducens, Oceanicola nanhaiensis, Oceanicola antarcticus and
            Oceanicola flagellatus, as Pseudooceanicola batsensis comb. nov.,
            Pseudooceanicola marinus comb. nov., Pseudooceanicola
            nitratireducens comb. nov., Pseudooceanicola nanhaiensis comb.
            nov., Pseudooceanicola antarcticus comb. nov., and Pseudooceanicola
            flagellatus comb. nov
  JOURNAL   Antonie Van Leeuwenhoek 107 (4), 1065-1074 (2015)
   PUBMED   25663028
REFERENCE   2  (bases 1 to 4938305)
  AUTHORS   Li,G., Lai,Q., Liu,X., Du,Y., Sun,F. and Shao,Z.
  TITLE     Oceanicola atlantica sp. nov., isolated from surface seawater of
            the Atlantic Ocean
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 4938305)
  AUTHORS   Lai,Q., Li,G. and Shao,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-APR-2013) The Third Institute of Oceanography, State
            of Oceanic Administration (SOA), Daxue Road 184#, Xiamen, Fujian
            361005, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AQQX00000000.1.
            The Pseudooceanicola atlanticus whole genome shotgun (WGS) project
            has the project accession NZ_AQQX00000000.  This version of the
            project (01) has the accession number NZ_AQQX01000000, and consists
            of sequences AQQX01000001-AQQX01000047.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SOAPdenovo v. 1.05
            Genome Coverage       :: 162.0x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000768315.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:22:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,715
            CDSs (total)                      :: 4,665
            Genes (coding)                    :: 4,622
            CDSs (with protein)               :: 4,622
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 12 of 43
            Pseudo Genes (incomplete)         :: 34 of 43
            Pseudo Genes (internal stop)      :: 7 of 43
            Pseudo Genes (multiple problems)  :: 9 of 43
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4938305
                     /organism="Pseudooceanicola atlanticus"
                     /mol_type="genomic DNA"
                     /strain="22II-s11g"
                     /isolation_source="deep sea sediment"
                     /db_xref="taxon:1461694"
                     /geo_loc_name="Atlantic Ocean"
                     /collection_date="2012-11-15"
WGS         AQQX01000001-AQQX01000047
WGS_SCAFLD  NZ_AQQX01000001-NZ_AQQX01000047
//
LOCUS       NZ_ANGD01000000      6235607 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas syringae pv. actinidiae ICMP 18744, whole genome
            shotgun sequencing project.
ACCESSION   NZ_ANGD00000000
VERSION     NZ_ANGD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02471919
            Assembly: GCF_000342185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas syringae pv. actinidiae ICMP 18744
  ORGANISM  Pseudomonas syringae pv. actinidiae ICMP 18744
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas
            syringae.
REFERENCE   1  (bases 1 to 6235607)
  AUTHORS   Butler,M., Poulter,R., Day,R., Black,M., Zhibo,Z., Lamont,I.,
            Huang,L. and Stockwell,P.
  TITLE     Pseudomonas syringae pv. actinidiae (PSA) Isolates from Recent
            Outbreaks of Bacterial Canker of Kiwifruit Belong to Different
            Genetic Lineages that Originated in China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6235607)
  AUTHORS   Butler,M., Poulter,R., Day,R., Black,M., Zhibo,Z., Lamont,I.,
            Huang,L. and Stockwell,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-NOV-2012) Biochemistry, University of Otago, 710
            Cumberland Street, Dunedin, Otago 9016, New Zealand
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ANGD00000000.1.
            The Pseudomonas syringae pv. actinidiae ICMP 18744 whole genome
            shotgun (WGS) project has the project accession NZ_ANGD00000000.
            This version of the project (01) has the accession number
            NZ_ANGD01000000, and consists of sequences
            ANGD01000001-ANGD01000442.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Edena v. 110920
            Assembly Name         :: ICMP18744PSA1.0
            Genome Coverage       :: 200.0x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000342185.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:21:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,795
            CDSs (total)                      :: 5,729
            Genes (coding)                    :: 5,369
            CDSs (with protein)               :: 5,369
            Genes (RNA)                       :: 66
            rRNAs                             :: 3, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 23S)
            partial rRNAs                     :: 3 (16S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 360
            CDSs (without protein)            :: 360
            Pseudo Genes (ambiguous residues) :: 0 of 360
            Pseudo Genes (frameshifted)       :: 116 of 360
            Pseudo Genes (incomplete)         :: 248 of 360
            Pseudo Genes (internal stop)      :: 33 of 360
            Pseudo Genes (multiple problems)  :: 36 of 360
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6235607
                     /organism="Pseudomonas syringae pv. actinidiae ICMP 18744"
                     /mol_type="genomic DNA"
                     /strain="ICMP 18744"
                     /host="Actinidia deliciosa"
                     /culture_collection="ICMP:18744"
                     /db_xref="taxon:1104680"
                     /geo_loc_name="Italy: Rome"
                     /pathovar="actinidiae"
                     /note="causes bacterial canker, Kiwifruit vine disease"
WGS         ANGD01000001-ANGD01000442
WGS_SCAFLD  NZ_ANGD01000001-NZ_ANGD01000442
//
LOCUS       NZ_JBSAXM010000000   6476128 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas fitomaticsae strain Li3LvA2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSAXM000000000
VERSION     NZ_JBSAXM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50273554
            Assembly: GCF_056156625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas fitomaticsae
  ORGANISM  Pseudomonas fitomaticsae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6476128)
  AUTHORS   Knecht,C.A., Prack Mccormick,B., Alvarez,V.E., Buzzola,F.,
            Fuchs,J., Salgado,P., Campos,J., Quiroga,M.P. and Centron,D.
  TITLE     The use of glyphosate in agriculture contributes to the rise of
            species causing multidrug hospital-acquired infections
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6476128)
  AUTHORS   Knecht,C.A., Campos,J., Alvarez,V.E., Quiroga,M.P. and Centron,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JUL-2025) Institute of Research in Medical
            Microbiology and Parasitology, Universidad de Buenos Aires,
            CONICET, Paraguay 2155, Buenos Aires 1121, Argentina
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSAXM000000000.1.
            The Pseudomonas fitomaticsae whole genome shotgun (WGS) project has
            the project accession NZ_JBSAXM000000000.  This version of the
            project (01) has the accession number NZ_JBSAXM010000000, and
            consists of sequences JBSAXM010000001-JBSAXM010000094.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 143x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056156625.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:43:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,977
            CDSs (total)                      :: 5,905
            Genes (coding)                    :: 5,805
            CDSs (with protein)               :: 5,805
            Genes (RNA)                       :: 72
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 12 of 100
            Pseudo Genes (incomplete)         :: 88 of 100
            Pseudo Genes (internal stop)      :: 7 of 100
            Pseudo Genes (multiple problems)  :: 7 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6476128
                     /organism="Pseudomonas fitomaticsae"
                     /mol_type="genomic DNA"
                     /strain="Li3LvA2"
                     /isolation_source="sediment"
                     /db_xref="taxon:2837969"
                     /geo_loc_name="Argentina: Ramsar site at the Parana Delta"
                     /lat_lon="34.2228988 S 58.8975770 W"
                     /collection_date="2020-12"
WGS         JBSAXM010000001-JBSAXM010000094
WGS_SCAFLD  NZ_JBSAXM010000001-NZ_JBSAXM010000094
//
LOCUS       NZ_CDVIYD010000000   5162985 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Salipiger bermudensis isolate MarMAG_005456, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVIYD000000000
VERSION     NZ_CDVIYD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737634
            Assembly: GCF_977693725.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Salipiger bermudensis (marine metagenome)
  ORGANISM  Salipiger bermudensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (bases 1 to 5162985)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVIYD000000000.1.
            The Salipiger bermudensis whole genome shotgun (WGS) project has
            the project accession NZ_CDVIYD000000000.  This version of the
            project (01) has the accession number NZ_CDVIYD010000000, and
            consists of sequences CDVIYD010000001-CDVIYD010000133.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977693725.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:47:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,987
            CDSs (total)                      :: 4,943
            Genes (coding)                    :: 4,864
            CDSs (with protein)               :: 4,864
            Genes (RNA)                       :: 44
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 79
            CDSs (without protein)            :: 79
            Pseudo Genes (ambiguous residues) :: 0 of 79
            Pseudo Genes (frameshifted)       :: 14 of 79
            Pseudo Genes (incomplete)         :: 68 of 79
            Pseudo Genes (internal stop)      :: 8 of 79
            Pseudo Genes (multiple problems)  :: 9 of 79
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5162985
                     /organism="Salipiger bermudensis"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_005456"
                     /isolation_source="Mariana Trench, particle-associated
                     microorganism hadal water (10,500 m)"
                     /db_xref="taxon:344736"
                     /environmental_sample
                     /geo_loc_name="Pacific Ocean"
                     /collection_date="2016-09-18"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVIYD010000001-CDVIYD010000133
WGS_SCAFLD  NZ_CDVIYD010000001-NZ_CDVIYD010000133
//
LOCUS       NZ_AKBS01000000      5847426 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas avellanae BPIC 631, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AKBS00000000
VERSION     NZ_AKBS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02471966
            Assembly: GCF_000302915.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas avellanae BPIC 631
  ORGANISM  Pseudomonas avellanae BPIC 631
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 5847426)
  AUTHORS   O'Brien,H.E., Thakur,S., Gong,Y., Fung,P., Zhang,J., Yuan,L.,
            Wang,P.W., Yong,C., Scortichini,M. and Guttman,D.S.
  TITLE     Extensive remodeling of the Pseudomonas syringae pv. avellanae type
            III secretome associated with two independent host shifts onto
            hazelnut
  JOURNAL   BMC Microbiol 12, 141 (2012)
   PUBMED   22800299
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5847426)
  AUTHORS   O'Brien,H.E., Thakur,S., Gong,Y., Fung,P., Zhang,J., Yuan,L.,
            Wang,P.W., Yong,C., Scortichini,M. and Guttman,D.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-APR-2012) Cell and Systems Biology, University of
            Toronto, 25 Willcocks, Toronto, ON M5S 3B2, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AKBS00000000.1.
            The Pseudomonas avellanae BPIC 631 whole genome shotgun (WGS)
            project has the project accession NZ_AKBS00000000.  This version of
            the project (01) has the accession number NZ_AKBS01000000, and
            consists of sequences AKBS01000001-AKBS01001602.
            Bacteria and source DNA available from David Guttman, Department of
            Cell and Systems Biology, University of Toronto, 25 Willcocks St.
            Toronto ON, M5S 3B2, Canada.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: CLC Genomics Workbench v. 4.8
            Assembly Name         :: Pav631_1.0
            Genome Coverage       :: 150.0x
            Sequencing Technology :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000302915.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:48:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,817
            CDSs (total)                      :: 5,782
            Genes (coding)                    :: 5,312
            CDSs (with protein)               :: 5,312
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 470
            CDSs (without protein)            :: 470
            Pseudo Genes (ambiguous residues) :: 0 of 470
            Pseudo Genes (frameshifted)       :: 125 of 470
            Pseudo Genes (incomplete)         :: 340 of 470
            Pseudo Genes (internal stop)      :: 32 of 470
            Pseudo Genes (multiple problems)  :: 26 of 470
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5847426
                     /organism="Pseudomonas avellanae BPIC 631"
                     /mol_type="genomic DNA"
                     /strain="BPIC 631"
                     /host="Corylus avellana"
                     /type_material="type strain of Pseudomonas avellanae"
                     /db_xref="taxon:1154758"
                     /geo_loc_name="Greece"
                     /collection_date="1976"
                     /collected_by="P. G. Psallidas"
                     /note="type strain of Pseudomonas avellanae BPIC 631"
WGS         AKBS01000001-AKBS01001602
WGS_SCAFLD  NZ_JH951446-NZ_JH951742
//
LOCUS       NZ_CDVLWM010000000   4303266 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Pseudooceanicola atlanticus isolate MarMAG_005387, whole
            genome shotgun sequencing project.
ACCESSION   NZ_CDVLWM000000000
VERSION     NZ_CDVLWM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737656
            Assembly: GCF_977713595.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Pseudooceanicola atlanticus (marine metagenome)
  ORGANISM  Pseudooceanicola atlanticus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Pseudooceanicola.
REFERENCE   1  (bases 1 to 4303266)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVLWM000000000.1.
            The Pseudooceanicola atlanticus whole genome shotgun (WGS) project
            has the project accession NZ_CDVLWM000000000.  This version of the
            project (01) has the accession number NZ_CDVLWM010000000, and
            consists of sequences CDVLWM010000001-CDVLWM010000250.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977713595.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:44:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,324
            CDSs (total)                      :: 4,294
            Genes (coding)                    :: 4,175
            CDSs (with protein)               :: 4,175
            Genes (RNA)                       :: 30
            tRNAs                             :: 27
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 119
            CDSs (without protein)            :: 119
            Pseudo Genes (ambiguous residues) :: 0 of 119
            Pseudo Genes (frameshifted)       :: 7 of 119
            Pseudo Genes (incomplete)         :: 108 of 119
            Pseudo Genes (internal stop)      :: 9 of 119
            Pseudo Genes (multiple problems)  :: 5 of 119
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4303266
                     /organism="Pseudooceanicola atlanticus"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_005387"
                     /isolation_source="Mariana Trench, particle-associated
                     microorganism hadal water (10,500 m)"
                     /db_xref="taxon:1461694"
                     /environmental_sample
                     /geo_loc_name="Pacific Ocean"
                     /collection_date="2016-09-18"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVLWM010000001-CDVLWM010000250
WGS_SCAFLD  NZ_CDVLWM010000001-NZ_CDVLWM010000250
//
LOCUS       NZ_JAOQBS010000000   4747868 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain SAL_FB6666AA, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAOQBS000000000
VERSION     NZ_JAOQBS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN31037845
            Assembly: GCF_027383285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4747868)
  AUTHORS   Zhou,X. and Yue,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-SEP-2022) Veterinary Medicine, College of Animal
            Science, 866 Yuhangtang Road, Hangzhou, Zhejiang 310058, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAOQBS000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JAOQBS000000000.  This version of the project
            (01) has the accession number NZ_JAOQBS010000000, and consists of
            sequences JAOQBS010000001-JAOQBS010000053.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SKESA v. 2.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_027383285.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:59:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,676
            CDSs (total)                      :: 4,584
            Genes (coding)                    :: 4,219
            CDSs (with protein)               :: 4,219
            Genes (RNA)                       :: 92
            rRNAs                             :: 8, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 2 (5S, 16S)
            tRNAs                             :: 66
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 365
            CDSs (without protein)            :: 365
            Pseudo Genes (ambiguous residues) :: 0 of 365
            Pseudo Genes (frameshifted)       :: 183 of 365
            Pseudo Genes (incomplete)         :: 127 of 365
            Pseudo Genes (internal stop)      :: 111 of 365
            Pseudo Genes (multiple problems)  :: 47 of 365
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4747868
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="SAL_FB6666AA"
                     /host="Aves"
                     /db_xref="taxon:28901"
WGS         JAOQBS010000001-JAOQBS010000053
WGS_SCAFLD  NZ_JAOQBS010000001-NZ_JAOQBS010000053
//
LOCUS       NZ_JAPTIP010000000   4854769 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain SAL00734, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAPTIP000000000
VERSION     NZ_JAPTIP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN31047895
            Assembly: GCF_027382935.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4854769)
  AUTHORS   Zhou,X.
  TITLE     Population genetic analysis of Salmonella Pullorum
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4854769)
  AUTHORS   Zhou,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-SEP-2022) Veterinary Medicine, College of Animal
            Science, 866 Yuhangtang Road, Hangzhou, Zhejiang 310058, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAPTIP000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JAPTIP000000000.  This version of the project
            (01) has the accession number NZ_JAPTIP010000000, and consists of
            sequences JAPTIP010000001-JAPTIP010000039.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 290x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_027382935.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:31:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,819
            CDSs (total)                      :: 4,729
            Genes (coding)                    :: 4,367
            CDSs (with protein)               :: 4,367
            Genes (RNA)                       :: 90
            rRNAs                             :: 7, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 6, 2 (5S, 16S)
            tRNAs                             :: 68
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 362
            CDSs (without protein)            :: 362
            Pseudo Genes (ambiguous residues) :: 0 of 362
            Pseudo Genes (frameshifted)       :: 178 of 362
            Pseudo Genes (incomplete)         :: 133 of 362
            Pseudo Genes (internal stop)      :: 111 of 362
            Pseudo Genes (multiple problems)  :: 51 of 362
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4854769
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="SAL00734"
                     /host="Aves"
                     /db_xref="taxon:28901"
WGS         JAPTIP010000001-JAPTIP010000039
WGS_SCAFLD  NZ_JAPTIP010000001-NZ_JAPTIP010000039
//
LOCUS       NZ_JAPTIO010000000   4864333 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain SAL03428, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAPTIO000000000
VERSION     NZ_JAPTIO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN31047896
            Assembly: GCF_027382895.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4864333)
  AUTHORS   Zhou,X.
  TITLE     Population genetic analysis of Salmonella Pullorum
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4864333)
  AUTHORS   Zhou,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-SEP-2022) Veterinary Medicine, College of Animal
            Science, 866 Yuhangtang Road, Hangzhou, Zhejiang 310058, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAPTIO000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JAPTIO000000000.  This version of the project
            (01) has the accession number NZ_JAPTIO010000000, and consists of
            sequences JAPTIO010000001-JAPTIO010000084.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 290x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_027382895.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:39:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,851
            CDSs (total)                      :: 4,762
            Genes (coding)                    :: 4,391
            CDSs (with protein)               :: 4,391
            Genes (RNA)                       :: 89
            rRNAs                             :: 7, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 6, 2 (5S, 16S)
            tRNAs                             :: 67
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 371
            CDSs (without protein)            :: 371
            Pseudo Genes (ambiguous residues) :: 0 of 371
            Pseudo Genes (frameshifted)       :: 177 of 371
            Pseudo Genes (incomplete)         :: 143 of 371
            Pseudo Genes (internal stop)      :: 111 of 371
            Pseudo Genes (multiple problems)  :: 51 of 371
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4864333
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="SAL03428"
                     /host="Aves"
                     /db_xref="taxon:28901"
WGS         JAPTIO010000001-JAPTIO010000084
WGS_SCAFLD  NZ_JAPTIO010000001-NZ_JAPTIO010000084
//
LOCUS       NZ_JAPTIT010000000   4753477 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain ERS2630752, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAPTIT000000000
VERSION     NZ_JAPTIT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN31047891
            Assembly: GCF_027382995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4753477)
  AUTHORS   Zhou,X.
  TITLE     Population genetic analysis of Salmonella Pullorum
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4753477)
  AUTHORS   Zhou,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-SEP-2022) Veterinary Medicine, College of Animal
            Science, 866 Yuhangtang Road, Hangzhou, Zhejiang 310058, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAPTIT000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JAPTIT000000000.  This version of the project
            (01) has the accession number NZ_JAPTIT010000000, and consists of
            sequences JAPTIT010000001-JAPTIT010000033.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SKESA v. 2.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 97x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_027382995.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:45:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,693
            CDSs (total)                      :: 4,609
            Genes (coding)                    :: 4,242
            CDSs (with protein)               :: 4,242
            Genes (RNA)                       :: 84
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 66
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 367
            CDSs (without protein)            :: 367
            Pseudo Genes (ambiguous residues) :: 0 of 367
            Pseudo Genes (frameshifted)       :: 181 of 367
            Pseudo Genes (incomplete)         :: 132 of 367
            Pseudo Genes (internal stop)      :: 114 of 367
            Pseudo Genes (multiple problems)  :: 52 of 367
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4753477
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="ERS2630752"
                     /host="Aves"
                     /db_xref="taxon:28901"
WGS         JAPTIT010000001-JAPTIT010000033
WGS_SCAFLD  NZ_JAPTIT010000001-NZ_JAPTIT010000033
//
LOCUS       NZ_JAMZIB010000000   4775185 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain SAL04095, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAMZIB000000000
VERSION     NZ_JAMZIB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN29402819
            Assembly: GCF_027397255.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4775185)
  AUTHORS   Yue,M. and Zhou,X.
  TITLE     Salmonella sequencing
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4775185)
  AUTHORS   Yue,M. and Zhou,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-JUN-2022) College of Animal Sciences, Zhejiang
            University, Yuhangtang Road, Hangzhou 310058, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAMZIB000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JAMZIB000000000.  This version of the project
            (01) has the accession number NZ_JAMZIB010000000, and consists of
            sequences JAMZIB010000001-JAMZIB010000030.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 290x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_027397255.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:48:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,701
            CDSs (total)                      :: 4,607
            Genes (coding)                    :: 4,229
            CDSs (with protein)               :: 4,229
            Genes (RNA)                       :: 94
            rRNAs                             :: 7, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 7, 2 (5S, 16S)
            tRNAs                             :: 70
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 378
            CDSs (without protein)            :: 378
            Pseudo Genes (ambiguous residues) :: 0 of 378
            Pseudo Genes (frameshifted)       :: 192 of 378
            Pseudo Genes (incomplete)         :: 137 of 378
            Pseudo Genes (internal stop)      :: 110 of 378
            Pseudo Genes (multiple problems)  :: 52 of 378
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4775185
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="SAL04095"
                     /host="Aves"
                     /db_xref="taxon:28901"
WGS         JAMZIB010000001-JAMZIB010000030
WGS_SCAFLD  NZ_JAMZIB010000001-NZ_JAMZIB010000030
//
LOCUS       NZ_ABUNEW020000000   6304291 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas putida strain 2024EL-00550, whole genome shotgun
            sequencing project.
ACCESSION   NZ_ABUNEW000000000
VERSION     NZ_ABUNEW000000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43525241
            Assembly: GCF_041867535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas putida
  ORGANISM  Pseudomonas putida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6304291)
  AUTHORS   Dale,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-SEP-2024) Public Health Laboratory - Infectious
            Disease Lab, Minnesota Department of Health Infectious Disease
            Laboratory Submission Group, 601 Robert St. N, St. Paul, MN 55164,
            USA
REFERENCE   2  (bases 1 to 6304291)
  CONSRTM   Clinical and Environmental Microbiology Branch: Whole genome
            sequencing antimicrobial resistance pathogens in the healthcare
            setting
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2024) Division of Healthcare Quality Promotion,
            US Centers for Disease Control and Prevention, 1600 Clifton Rd,
            Atlanta, GA, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ABUNEW000000000.2.
            The Pseudomonas putida whole genome shotgun (WGS) project has the
            project accession NZ_ABUNEW000000000.  This version of the project
            (02) has the accession number NZ_ABUNEW020000000, and consists of
            sequences ABUNEW020000001-ABUNEW020000140.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 78x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_041867535.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:13:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,049
            CDSs (total)                      :: 5,967
            Genes (coding)                    :: 5,789
            CDSs (with protein)               :: 5,789
            Genes (RNA)                       :: 82
            rRNAs                             :: 5, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 16S)
            partial rRNAs                     :: 1, 1, 2 (5S, 16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 178
            CDSs (without protein)            :: 178
            Pseudo Genes (ambiguous residues) :: 0 of 178
            Pseudo Genes (frameshifted)       :: 27 of 178
            Pseudo Genes (incomplete)         :: 154 of 178
            Pseudo Genes (internal stop)      :: 12 of 178
            Pseudo Genes (multiple problems)  :: 14 of 178
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6304291
                     /organism="Pseudomonas putida"
                     /mol_type="genomic DNA"
                     /strain="2024EL-00550"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:303"
                     /geo_loc_name="USA"
                     /collection_date="2024"
WGS         ABUNEW020000001-ABUNEW020000140
WGS_SCAFLD  NZ_ABUNEW020000001-NZ_ABUNEW020000140
//
LOCUS       NZ_ASQS01000000      6977933 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa str. C 763, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ASQS00000000
VERSION     NZ_ASQS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02142557
            Assembly: GCF_000412355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa str. C 763
  ORGANISM  Pseudomonas aeruginosa str. C 763
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6977933)
  AUTHORS   Stewart,L., Ford,A., Sangal,V., Jeukens,J., Boyle,B.,
            Kukavica-Ibrulj,I., Caim,S., Crossman,L., Hoskisson,P.A.,
            Levesque,R. and Tucker,N.P.
  TITLE     Draft genomes of 12 host-adapted and environmental isolates of
            Pseudomonas aeruginosa and their positions in the core genome
            phylogeny
  JOURNAL   Pathog Dis 71 (1), 20-25 (2014)
   PUBMED   24167005
REFERENCE   2  (bases 1 to 6977933)
  AUTHORS   Stewart,L. and Tucker,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-MAY-2013) SIPBS, University of Strathclyde, 161
            Cathedral Street, Glasgow g4 0re, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ASQS00000000.1.
            The Pseudomonas aeruginosa str. C 763 whole genome shotgun (WGS)
            project has the project accession NZ_ASQS00000000.  This version of
            the project (01) has the accession number NZ_ASQS01000000, and
            consists of sequences ASQS01000001-ASQS01000844.
            Bacteria and source DNA available from Nicholas Tucker, University
            of Strathclyde, 161 Cathedral St, Glasgow, G4 0RE, United Kingdom.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: CLC NGS Cell v. 2012-09-01
            Genome Coverage       :: 29.8x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000412355.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:27:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,072
            CDSs (total)                      :: 7,025
            Genes (coding)                    :: 6,674
            CDSs (with protein)               :: 6,674
            Genes (RNA)                       :: 47
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 351
            CDSs (without protein)            :: 351
            Pseudo Genes (ambiguous residues) :: 0 of 351
            Pseudo Genes (frameshifted)       :: 24 of 351
            Pseudo Genes (incomplete)         :: 326 of 351
            Pseudo Genes (internal stop)      :: 11 of 351
            Pseudo Genes (multiple problems)  :: 8 of 351
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6977933
                     /organism="Pseudomonas aeruginosa str. C 763"
                     /mol_type="genomic DNA"
                     /strain="C 763"
                     /isolation_source="cystic fibrosis lung infection"
                     /host="Homo sapiens"
                     /db_xref="taxon:1333540"
WGS         ASQS01000001-ASQS01000844
WGS_SCAFLD  NZ_ASQS01000001-NZ_ASQS01000844
//
LOCUS       NZ_JAPTIF010000000   4860802 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain SAL02666, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAPTIF000000000
VERSION     NZ_JAPTIF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN31047885
            Assembly: GCF_027382705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4860802)
  AUTHORS   Zhou,X.
  TITLE     Genetic evolutionary relationships among different lineages of
            Salmonella Pullorum
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4860802)
  AUTHORS   Zhou,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-SEP-2022) Veterinary Medicine, College of Animal
            Science, 866 Yuhangtang Road, Hangzhou, Zhejiang 310058, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAPTIF000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JAPTIF000000000.  This version of the project
            (01) has the accession number NZ_JAPTIF010000000, and consists of
            sequences JAPTIF010000001-JAPTIF010000332.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 290x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_027382705.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:44:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,965
            CDSs (total)                      :: 4,866
            Genes (coding)                    :: 4,466
            CDSs (with protein)               :: 4,466
            Genes (RNA)                       :: 99
            rRNAs                             :: 8, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 8, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 400
            CDSs (without protein)            :: 400
            Pseudo Genes (ambiguous residues) :: 0 of 400
            Pseudo Genes (frameshifted)       :: 184 of 400
            Pseudo Genes (incomplete)         :: 164 of 400
            Pseudo Genes (internal stop)      :: 111 of 400
            Pseudo Genes (multiple problems)  :: 50 of 400
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4860802
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="SAL02666"
                     /host="Aves"
                     /db_xref="taxon:28901"
WGS         JAPTIF010000001-JAPTIF010000332
WGS_SCAFLD  NZ_JAPTIF010000001-NZ_JAPTIF010000332
//
LOCUS       NZ_JAOQBN010000000   4868818 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain SAL03406, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAOQBN000000000
VERSION     NZ_JAOQBN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN31037850
            Assembly: GCF_027383195.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4868818)
  AUTHORS   Zhou,X. and Yue,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-SEP-2022) Veterinary Medicine, College of Animal
            Science, 866 Yuhangtang Road, Hangzhou, Zhejiang 310058, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAOQBN000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JAOQBN000000000.  This version of the project
            (01) has the accession number NZ_JAOQBN010000000, and consists of
            sequences JAOQBN010000001-JAOQBN010000091.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 290x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_027383195.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:54:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,860
            CDSs (total)                      :: 4,771
            Genes (coding)                    :: 4,397
            CDSs (with protein)               :: 4,397
            Genes (RNA)                       :: 89
            rRNAs                             :: 7, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 7, 2 (5S, 16S)
            tRNAs                             :: 66
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 374
            CDSs (without protein)            :: 374
            Pseudo Genes (ambiguous residues) :: 0 of 374
            Pseudo Genes (frameshifted)       :: 178 of 374
            Pseudo Genes (incomplete)         :: 145 of 374
            Pseudo Genes (internal stop)      :: 112 of 374
            Pseudo Genes (multiple problems)  :: 52 of 374
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4868818
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="SAL03406"
                     /host="Aves"
                     /db_xref="taxon:28901"
WGS         JAOQBN010000001-JAOQBN010000091
WGS_SCAFLD  NZ_JAOQBN010000001-NZ_JAOQBN010000091
//
LOCUS       NZ_LSIF01000000      3942209 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudoxanthomonas mexicana strain CCH9-G4, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LSIF00000000
VERSION     NZ_LSIF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04299429
            Assembly: GCF_001556105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudoxanthomonas mexicana
  ORGANISM  Pseudoxanthomonas mexicana
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
REFERENCE   1  (bases 1 to 3942209)
  AUTHORS   Konstantinidis,K.T. and Soto-Giron,M.J.
  TITLE     Characterization of biofilms developing on hospital showerheads and
            implications for nosocomial infections
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3942209)
  AUTHORS   Santo-Domingo,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-FEB-2016) Biology, Georgia Institute of Technology,
            North Ave NW, Atlanta, GA 30332, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LSIF00000000.1.
            The Pseudoxanthomonas mexicana whole genome shotgun (WGS) project
            has the project accession NZ_LSIF00000000.  This version of the
            project (01) has the accession number NZ_LSIF01000000, and consists
            of sequences LSIF01000001-LSIF01000108.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SPAdes v. 3.5
            Genome Coverage       :: 5x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001556105.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:57:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,737
            CDSs (total)                      :: 3,682
            Genes (coding)                    :: 3,611
            CDSs (with protein)               :: 3,611
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 12 of 71
            Pseudo Genes (incomplete)         :: 63 of 71
            Pseudo Genes (internal stop)      :: 1 of 71
            Pseudo Genes (multiple problems)  :: 4 of 71
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3942209
                     /organism="Pseudoxanthomonas mexicana"
                     /mol_type="genomic DNA"
                     /strain="CCH9-G4"
                     /isolation_source="hospital shower hose biofilm"
                     /db_xref="taxon:128785"
                     /geo_loc_name="USA: Ohio"
                     /lat_lon="40.10720842 N 82.18359231 W"
                     /collection_date="2012"
WGS         LSIF01000001-LSIF01000108
WGS_SCAFLD  NZ_LSIF01000001-NZ_LSIF01000108
//
LOCUS       NZ_CAADQE010000000   6302744 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa isolate XDR-PA, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CAADQE000000000
VERSION     NZ_CAADQE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5312864
            Assembly: GCF_900708665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1
  AUTHORS   Del Barrio-Tofino,E., Cabot,G., Oliver,A., Lopez-Causape,C. and
            Cortes,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-MAR-2019) Institut d'Investigacio Sanitaria de Palma,
            Microbiology, Ctra. Valldemossa, 79 - Mod (i) - Flat (-1), 07120,
            Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAADQE000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_CAADQE000000000.  This version of the
            project (01) has the accession number NZ_CAADQE010000000, and
            consists of sequences CAADQE010000001-CAADQE010000775.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900708665.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:33:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,411
            CDSs (total)                      :: 6,375
            Genes (coding)                    :: 6,042
            CDSs (with protein)               :: 6,042
            Genes (RNA)                       :: 36
            rRNAs                             :: 2, 2 (16S, 23S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 333
            CDSs (without protein)            :: 333
            Pseudo Genes (ambiguous residues) :: 0 of 333
            Pseudo Genes (frameshifted)       :: 27 of 333
            Pseudo Genes (incomplete)         :: 305 of 333
            Pseudo Genes (internal stop)      :: 2 of 333
            Pseudo Genes (multiple problems)  :: 1 of 333
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6302744
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /isolate="XDR-PA"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Spain"
                     /collection_date="2018"
                     /collected_by="GEMARA-SEIMC Pseudomonas study group"
WGS         CAADQE010000001-CAADQE010000775
WGS_SCAFLD  NZ_CAADQE010000001-NZ_CAADQE010000775
//
LOCUS       NZ_JBJKNO010000000   6685172 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PA2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKNO000000000
VERSION     NZ_JBJKNO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45048887
            Assembly: GCF_045569755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6685172)
  AUTHORS   Zhang,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) Department of Clinical Microbiology, First
            Affiliated Hospital of Nanchang University, Nanchang University,
            Nanchang, Yong wai zheng jie No. 17, Nanchang 330006, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKNO000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JBJKNO000000000.  This version of the
            project (01) has the accession number NZ_JBJKNO010000000, and
            consists of sequences JBJKNO010000001-JBJKNO010000097.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. 1.2.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 388.0x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045569755.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:43:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,348
            CDSs (total)                      :: 6,279
            Genes (coding)                    :: 6,183
            CDSs (with protein)               :: 6,183
            Genes (RNA)                       :: 69
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 58
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 96
            CDSs (without protein)            :: 96
            Pseudo Genes (ambiguous residues) :: 0 of 96
            Pseudo Genes (frameshifted)       :: 20 of 96
            Pseudo Genes (incomplete)         :: 80 of 96
            Pseudo Genes (internal stop)      :: 4 of 96
            Pseudo Genes (multiple problems)  :: 7 of 96
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6685172
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PA2"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="China: Nanchang"
                     /collection_date="2021/2022"
WGS         JBJKNO010000001-JBJKNO010000097
WGS_SCAFLD  NZ_JBJKNO010000001-NZ_JBJKNO010000097
//
LOCUS       NZ_JBJKFH010000000   6681926 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain Ch39, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKFH000000000
VERSION     NZ_JBJKFH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45008372
            Assembly: GCF_045505155.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6681926)
  AUTHORS   Castelan-Sanchez,H., Fernandez Dodero,J., Martinez-Ocampo,F.,
            Rojas-Vargas,J., Hurtado-Ramirez,J.M., Rios-Vazquez,D.I.,
            Sanchez-Alonso,P.G., Vazquez-Cruz,C. and Rojas-Ruiz,N.
  TITLE     Thermophilic Pseudomonas aeruginosa Strain Ch39 Isolated from
            Chignahuapan Hot Springs in Puebla, Mexico
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6681926)
  AUTHORS   Castelan-Sanchez,H., Fernandez Dodero,J., Martinez-Ocampo,F.,
            Rojas-Vargas,J., Hurtado-Ramirez,J.M., Rios-Vazquez,D.I.,
            Sanchez-Alonso,P.G., Vazquez-Cruz,C. and Rojas-Ruiz,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Department of Pathology and Laboratory
            Medicine, Western University, London, ON, Canada, Western
            University, 1151 Richmond Street, London N6A 3K7, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKFH000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JBJKFH000000000.  This version of the
            project (01) has the accession number NZ_JBJKFH010000000, and
            consists of sequences JBJKFH010000001-JBJKFH010000097.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Centro de Investigaciones en
            Ciencias Microbiologicas, Instituto de Ciencias, Benemerita
            Universidad Autonoma de Puebla.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: FEB-2023
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 2241.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045505155.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:38:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,286
            CDSs (total)                      :: 6,218
            Genes (coding)                    :: 6,132
            CDSs (with protein)               :: 6,132
            Genes (RNA)                       :: 68
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (5S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 86
            CDSs (without protein)            :: 86
            Pseudo Genes (ambiguous residues) :: 0 of 86
            Pseudo Genes (frameshifted)       :: 19 of 86
            Pseudo Genes (incomplete)         :: 70 of 86
            Pseudo Genes (internal stop)      :: 7 of 86
            Pseudo Genes (multiple problems)  :: 10 of 86
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6681926
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="Ch39"
                     /isolation_source="Thermal Water"
                     /db_xref="taxon:287"
                     /geo_loc_name="Mexico: Puebla"
                     /lat_lon="19.8416 N 97.9947 W"
                     /collection_date="2018-02"
WGS         JBJKFH010000001-JBJKFH010000097
WGS_SCAFLD  NZ_JBJKFH010000001-NZ_JBJKFH010000097
//
LOCUS       NZ_JBQYFV010000000   5958534 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas sp. B002-5F, whole genome shotgun sequencing project.
ACCESSION   NZ_JBQYFV000000000
VERSION     NZ_JBQYFV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50785819
            Assembly: GCF_056171715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas sp. B002-5F
  ORGANISM  Pseudomonas sp. B002-5F
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 5958534)
  AUTHORS   Sharma,P., Mckeown,C., Kingdon,A.D.H., Mcleman,A. and Roberts,A.P.
  TITLE     Pseudomonas spp. Draft Genome
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5958534)
  AUTHORS   Sharma,P., Mckeown,C., Kingdon,A.D.H., Mcleman,A. and Roberts,A.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-AUG-2025) Tropical Disease Biology, Liverpool School
            of Tropical Medicine, Pembroke Place, Liverpool L3 5QA, United
            Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBQYFV000000000.1.
            The Pseudomonas sp. B002-5F whole genome shotgun (WGS) project has
            the project accession NZ_JBQYFV000000000.  This version of the
            project (01) has the accession number NZ_JBQYFV010000000, and
            consists of sequences JBQYFV010000001-JBQYFV010000078.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Prof Adam Roberts, Liverpool
            School of Tropical Medicine.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 69.08x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056171715.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:09:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,596
            CDSs (total)                      :: 5,504
            Genes (coding)                    :: 5,432
            CDSs (with protein)               :: 5,432
            Genes (RNA)                       :: 92
            rRNAs                             :: 10, 4, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 8, 3, 5 (5S, 16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 72
            CDSs (without protein)            :: 72
            Pseudo Genes (ambiguous residues) :: 0 of 72
            Pseudo Genes (frameshifted)       :: 8 of 72
            Pseudo Genes (incomplete)         :: 64 of 72
            Pseudo Genes (internal stop)      :: 3 of 72
            Pseudo Genes (multiple problems)  :: 2 of 72
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5958534
                     /organism="Pseudomonas sp. B002-5F"
                     /mol_type="genomic DNA"
                     /strain="B002-5F"
                     /isolation_source="Seal of a Bathtub"
                     /db_xref="taxon:3458702"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2021-03-24"
WGS         JBQYFV010000001-JBQYFV010000078
WGS_SCAFLD  NZ_JBQYFV010000001-NZ_JBQYFV010000078
//
LOCUS       NZ_CAADMU010000000   6672342 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa isolate XDR-PA, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CAADMU000000000
VERSION     NZ_CAADMU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5312778
            Assembly: GCF_900707785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1
  AUTHORS   Del Barrio-Tofino,E., Cabot,G., Oliver,A., Lopez-Causape,C. and
            Cortes,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-MAR-2019) Institut d'Investigacio Sanitaria de Palma,
            Microbiology, Ctra. Valldemossa, 79 - Mod (i) - Flat (-1), 07120,
            Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAADMU000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_CAADMU000000000.  This version of the
            project (01) has the accession number NZ_CAADMU010000000, and
            consists of sequences CAADMU010000001-CAADMU010001134.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900707785.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:55:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,090
            CDSs (total)                      :: 7,058
            Genes (coding)                    :: 6,619
            CDSs (with protein)               :: 6,619
            Genes (RNA)                       :: 32
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 26
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 439
            CDSs (without protein)            :: 439
            Pseudo Genes (ambiguous residues) :: 0 of 439
            Pseudo Genes (frameshifted)       :: 32 of 439
            Pseudo Genes (incomplete)         :: 409 of 439
            Pseudo Genes (internal stop)      :: 7 of 439
            Pseudo Genes (multiple problems)  :: 8 of 439
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6672342
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /isolate="XDR-PA"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Spain"
                     /collection_date="2018"
                     /collected_by="GEMARA-SEIMC Pseudomonas study group"
WGS         CAADMU010000001-CAADMU010001134
WGS_SCAFLD  NZ_CAADMU010000001-NZ_CAADMU010001134
//
LOCUS       NZ_JBJKNP010000000   6226595 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PA3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKNP000000000
VERSION     NZ_JBJKNP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45049789
            Assembly: GCF_045569785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6226595)
  AUTHORS   Zhang,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) Department of Clinical Microbiology, First
            Affiliated Hospital of Nanchang University, Nanchang University,
            Nanchang, Yong wai zheng jie No. 17, Nanchang 330006, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKNP000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JBJKNP000000000.  This version of the
            project (01) has the accession number NZ_JBJKNP010000000, and
            consists of sequences JBJKNP010000001-JBJKNP010000058.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. 1.2.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1267.0x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045569785.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:36:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,853
            CDSs (total)                      :: 5,789
            Genes (coding)                    :: 5,720
            CDSs (with protein)               :: 5,720
            Genes (RNA)                       :: 64
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 12 of 69
            Pseudo Genes (incomplete)         :: 57 of 69
            Pseudo Genes (internal stop)      :: 3 of 69
            Pseudo Genes (multiple problems)  :: 3 of 69
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6226595
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PA3"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="China: Nanchang"
                     /collection_date="2021/2022"
WGS         JBJKNP010000001-JBJKNP010000058
WGS_SCAFLD  NZ_JBJKNP010000001-NZ_JBJKNP010000058
//
LOCUS       NZ_PCQE01000000      6107235 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas cedrina strain MYb184, whole genome shotgun sequencing
            project.
ACCESSION   NZ_PCQE00000000
VERSION     NZ_PCQE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07581351
            Assembly: GCF_002980025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas cedrina
  ORGANISM  Pseudomonas cedrina
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6107235)
  AUTHORS   Zimmermann,J., Obeng,N., Yang,W., Obeng,O., Kissoyan,K., Pees,B.,
            Dirksen,P., Hoppner,M., Franke,A., Rosenstiel,P., Leippe,M.,
            Dierking,K., Kaleta,C. and Schulenburg,H.
  TITLE     Genomic, metabolic, and phenotypic characteristics of bacterial
            isolates from the natural microbiome of the model nematode
            Caenorhabditis elegans
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6107235)
  AUTHORS   Schulenburg,H., Petersen,C. and Yang,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2017) Evolutionary Ecology and Genetics,
            Zoological Institute, Kiel University, Am Botanischen Garten 3 - 9,
            Kiel 24118, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PCQE00000000.1.
            The Pseudomonas cedrina whole genome shotgun (WGS) project has the
            project accession NZ_PCQE00000000.  This version of the project
            (01) has the accession number NZ_PCQE01000000, and consists of
            sequences PCQE01000001-PCQE01000151.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 91x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002980025.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:14:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,591
            CDSs (total)                      :: 5,527
            Genes (coding)                    :: 5,401
            CDSs (with protein)               :: 5,401
            Genes (RNA)                       :: 64
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 126
            CDSs (without protein)            :: 126
            Pseudo Genes (ambiguous residues) :: 1 of 126
            Pseudo Genes (frameshifted)       :: 28 of 126
            Pseudo Genes (incomplete)         :: 106 of 126
            Pseudo Genes (internal stop)      :: 11 of 126
            Pseudo Genes (multiple problems)  :: 18 of 126
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6107235
                     /organism="Pseudomonas cedrina"
                     /mol_type="genomic DNA"
                     /strain="MYb184"
                     /isolation_source="compost"
                     /db_xref="taxon:651740"
                     /geo_loc_name="Germany: Roxel"
WGS         PCQE01000001-PCQE01000151
WGS_SCAFLD  NZ_PCQE01000001-NZ_PCQE01000151
//
LOCUS       NZ_JBJKBL010000000   4723850 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKBL000000000
VERSION     NZ_JBJKBL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026084
            Assembly: GCF_045504135.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4723850)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKBL000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJKBL000000000.  This version of the project
            (01) has the accession number NZ_JBJKBL010000000, and consists of
            sequences JBJKBL010000001-JBJKBL010000042.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045504135.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:03:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,666
            CDSs (total)                      :: 4,572
            Genes (coding)                    :: 4,378
            CDSs (with protein)               :: 4,378
            Genes (RNA)                       :: 94
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 76
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 194
            CDSs (without protein)            :: 194
            Pseudo Genes (ambiguous residues) :: 0 of 194
            Pseudo Genes (frameshifted)       :: 71 of 194
            Pseudo Genes (incomplete)         :: 137 of 194
            Pseudo Genes (internal stop)      :: 34 of 194
            Pseudo Genes (multiple problems)  :: 43 of 194
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4723850
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S5"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Liaocheng"
                     /collection_date="2019-03-03"
WGS         JBJKBL010000001-JBJKBL010000042
WGS_SCAFLD  NZ_JBJKBL010000001-NZ_JBJKBL010000042
//
LOCUS       NZ_JAKKZX010000000   6858195 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain Pae-30039, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAKKZX000000000
VERSION     NZ_JAKKZX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN25248203
            Assembly: GCF_021891535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6858195)
  AUTHORS   Papagiannitsis,C.C., Medvecky,M., Chudejova,K., Skalova,A.,
            Rotova,V., Spanelova,P., Jakubu,V., Zemlickova,H. and Hrabak,J.
  CONSRTM   Czech Participants of the European Antimicrobial Resistance
            Surveillance Network
  TITLE     Molecular Characterization of Carbapenemase-Producing Pseudomonas
            aeruginosa of Czech Origin and Evidence for Clonal Spread of
            Extensively Resistant Sequence Type 357 Expressing IMP-7
            Metallo-beta-Lactamase
  JOURNAL   Antimicrob Agents Chemother 61 (12), e01811-17 (2017)
   PUBMED   28993328
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6858195)
  AUTHORS   Papagiannitsis,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2022) Department of Microbiology, Faculty of
            Medicine, Charles University, Alej Svobody, Pilsen 32300, Czech
            Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAKKZX000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAKKZX000000000.  This version of the
            project (01) has the accession number NZ_JAKKZX010000000, and
            consists of sequences JAKKZX010000001-JAKKZX010000172.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.6.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 24x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_021891535.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:05:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,488
            CDSs (total)                      :: 6,416
            Genes (coding)                    :: 6,266
            CDSs (with protein)               :: 6,266
            Genes (RNA)                       :: 72
            rRNAs                             :: 5, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 1 (5S, 16S)
            tRNAs                             :: 59
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 150
            CDSs (without protein)            :: 150
            Pseudo Genes (ambiguous residues) :: 0 of 150
            Pseudo Genes (frameshifted)       :: 29 of 150
            Pseudo Genes (incomplete)         :: 126 of 150
            Pseudo Genes (internal stop)      :: 6 of 150
            Pseudo Genes (multiple problems)  :: 10 of 150
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6858195
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="Pae-30039"
                     /isolation_source="clinical sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Czech Republic"
                     /collection_date="2015"
WGS         JAKKZX010000001-JAKKZX010000172
WGS_SCAFLD  NZ_JAKKZX010000001-NZ_JAKKZX010000172
//
LOCUS       NZ_JBJKIS010000000   4901265 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S38, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKIS000000000
VERSION     NZ_JBJKIS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026098
            Assembly: GCF_045504795.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4901265)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKIS000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJKIS000000000.  This version of the project
            (01) has the accession number NZ_JBJKIS010000000, and consists of
            sequences JBJKIS010000001-JBJKIS010000126.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Duck.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045504795.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:13:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,898
            CDSs (total)                      :: 4,805
            Genes (coding)                    :: 4,597
            CDSs (with protein)               :: 4,597
            Genes (RNA)                       :: 93
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 3 (16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 208
            CDSs (without protein)            :: 208
            Pseudo Genes (ambiguous residues) :: 0 of 208
            Pseudo Genes (frameshifted)       :: 70 of 208
            Pseudo Genes (incomplete)         :: 142 of 208
            Pseudo Genes (internal stop)      :: 30 of 208
            Pseudo Genes (multiple problems)  :: 32 of 208
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4901265
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S38"
                     /host="duck"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Liaocheng"
                     /collection_date="2020-12-14"
WGS         JBJKIS010000001-JBJKIS010000126
WGS_SCAFLD  NZ_JBJKIS010000001-NZ_JBJKIS010000126
//
LOCUS       NZ_JBJKBM010000000   4749624 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S6, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKBM000000000
VERSION     NZ_JBJKBM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026085
            Assembly: GCF_045504105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4749624)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKBM000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJKBM000000000.  This version of the project
            (01) has the accession number NZ_JBJKBM010000000, and consists of
            sequences JBJKBM010000001-JBJKBM010000030.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045504105.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:55:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,673
            CDSs (total)                      :: 4,589
            Genes (coding)                    :: 4,233
            CDSs (with protein)               :: 4,233
            Genes (RNA)                       :: 84
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 356
            CDSs (without protein)            :: 356
            Pseudo Genes (ambiguous residues) :: 0 of 356
            Pseudo Genes (frameshifted)       :: 183 of 356
            Pseudo Genes (incomplete)         :: 126 of 356
            Pseudo Genes (internal stop)      :: 106 of 356
            Pseudo Genes (multiple problems)  :: 50 of 356
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4749624
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S6"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Liaocheng"
                     /collection_date="2019-03-03"
WGS         JBJKBM010000001-JBJKBM010000030
WGS_SCAFLD  NZ_JBJKBM010000001-NZ_JBJKBM010000030
//
LOCUS       NZ_JBJKNN010000000   7386882 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PA1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKNN000000000
VERSION     NZ_JBJKNN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45048886
            Assembly: GCF_045569815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7386882)
  AUTHORS   Zhang,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) Department of Clinical Microbiology, First
            Affiliated Hospital of Nanchang University, Nanchang University,
            Nanchang, Yong wai zheng jie No. 17, Nanchang 330006, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKNN000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JBJKNN000000000.  This version of the
            project (01) has the accession number NZ_JBJKNN010000000, and
            consists of sequences JBJKNN010000001-JBJKNN010000094.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. 1.2.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 321.0x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045569815.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:41:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,182
            CDSs (total)                      :: 7,111
            Genes (coding)                    :: 7,022
            CDSs (with protein)               :: 7,022
            Genes (RNA)                       :: 71
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 61
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 89
            CDSs (without protein)            :: 89
            Pseudo Genes (ambiguous residues) :: 0 of 89
            Pseudo Genes (frameshifted)       :: 8 of 89
            Pseudo Genes (incomplete)         :: 82 of 89
            Pseudo Genes (internal stop)      :: 2 of 89
            Pseudo Genes (multiple problems)  :: 3 of 89
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7386882
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PA1"
                     /isolation_source="Catheter tip"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="China: Nanchang"
                     /collection_date="2021/2022"
WGS         JBJKNN010000001-JBJKNN010000094
WGS_SCAFLD  NZ_JBJKNN010000001-NZ_JBJKNN010000094
//
LOCUS       NZ_JBJKIL010000000   4900424 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S14, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKIL000000000
VERSION     NZ_JBJKIL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026091
            Assembly: GCF_045504525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4900424)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKIL000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJKIL000000000.  This version of the project
            (01) has the accession number NZ_JBJKIL010000000, and consists of
            sequences JBJKIL010000001-JBJKIL010000128.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Chicken.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045504525.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:11:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,895
            CDSs (total)                      :: 4,801
            Genes (coding)                    :: 4,593
            CDSs (with protein)               :: 4,593
            Genes (RNA)                       :: 94
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 3 (16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 15
            Pseudo Genes (total)              :: 208
            CDSs (without protein)            :: 208
            Pseudo Genes (ambiguous residues) :: 0 of 208
            Pseudo Genes (frameshifted)       :: 70 of 208
            Pseudo Genes (incomplete)         :: 142 of 208
            Pseudo Genes (internal stop)      :: 30 of 208
            Pseudo Genes (multiple problems)  :: 32 of 208
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4900424
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S14"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Yantai"
                     /collection_date="2019-04-05"
WGS         JBJKIL010000001-JBJKIL010000128
WGS_SCAFLD  NZ_JBJKIL010000001-NZ_JBJKIL010000128
//
LOCUS       NZ_JBJKIO010000000   4749141 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S20, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKIO000000000
VERSION     NZ_JBJKIO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026094
            Assembly: GCF_045504835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4749141)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKIO000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJKIO000000000.  This version of the project
            (01) has the accession number NZ_JBJKIO010000000, and consists of
            sequences JBJKIO010000001-JBJKIO010000030.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Chicken.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045504835.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:13:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,673
            CDSs (total)                      :: 4,589
            Genes (coding)                    :: 4,233
            CDSs (with protein)               :: 4,233
            Genes (RNA)                       :: 84
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 356
            CDSs (without protein)            :: 356
            Pseudo Genes (ambiguous residues) :: 0 of 356
            Pseudo Genes (frameshifted)       :: 183 of 356
            Pseudo Genes (incomplete)         :: 126 of 356
            Pseudo Genes (internal stop)      :: 106 of 356
            Pseudo Genes (multiple problems)  :: 50 of 356
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4749141
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S20"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Liaocheng"
                     /collection_date="2020-07-01"
WGS         JBJKIO010000001-JBJKIO010000030
WGS_SCAFLD  NZ_JBJKIO010000001-NZ_JBJKIO010000030
//
LOCUS       NZ_JBJKBN010000000   4749261 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S7, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKBN000000000
VERSION     NZ_JBJKBN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026086
            Assembly: GCF_045503985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4749261)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKBN000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJKBN000000000.  This version of the project
            (01) has the accession number NZ_JBJKBN010000000, and consists of
            sequences JBJKBN010000001-JBJKBN010000031.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045503985.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:06:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,667
            CDSs (total)                      :: 4,588
            Genes (coding)                    :: 4,231
            CDSs (with protein)               :: 4,231
            Genes (RNA)                       :: 79
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 357
            CDSs (without protein)            :: 357
            Pseudo Genes (ambiguous residues) :: 0 of 357
            Pseudo Genes (frameshifted)       :: 184 of 357
            Pseudo Genes (incomplete)         :: 126 of 357
            Pseudo Genes (internal stop)      :: 106 of 357
            Pseudo Genes (multiple problems)  :: 50 of 357
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4749261
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S7"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Liaocheng"
                     /collection_date="2019-03-03"
WGS         JBJKBN010000001-JBJKBN010000031
WGS_SCAFLD  NZ_JBJKBN010000001-NZ_JBJKBN010000031
//
LOCUS       NZ_JBBEUM010000000   4977219 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas bubulae strain A1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBBEUM000000000
VERSION     NZ_JBBEUM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40424036
            Assembly: GCF_037402875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas bubulae
  ORGANISM  Pseudomonas bubulae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 4977219)
  AUTHORS   Chen,H.
  TITLE     Isolation of Psychrophilic Pseudomonas spp. from Tilapia and
            Preliminary Analysis of its Cold-resistant Genes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4977219)
  AUTHORS   Chen,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAR-2024) College of Food Science, South China
            Agricultural University, Wushan, Guangzhou, Guangdong 510642, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBEUM000000000.1.
            The Pseudomonas bubulae whole genome shotgun (WGS) project has the
            project accession NZ_JBBEUM000000000.  This version of the project
            (01) has the accession number NZ_JBBEUM010000000, and consists of
            sequences JBBEUM010000001-JBBEUM010000033.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: A5-Miseq v. V20160825
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 252.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037402875.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:52:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,568
            CDSs (total)                      :: 4,495
            Genes (coding)                    :: 4,425
            CDSs (with protein)               :: 4,425
            Genes (RNA)                       :: 73
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 17 of 70
            Pseudo Genes (incomplete)         :: 54 of 70
            Pseudo Genes (internal stop)      :: 11 of 70
            Pseudo Genes (multiple problems)  :: 12 of 70
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4977219
                     /organism="Pseudomonas bubulae"
                     /mol_type="genomic DNA"
                     /strain="A1"
                     /isolation_source="spoiled tilapia fillet"
                     /db_xref="taxon:2316085"
                     /geo_loc_name="China: Zhanjiang"
                     /collection_date="2021-12-29"
WGS         JBBEUM010000001-JBBEUM010000033
WGS_SCAFLD  NZ_JBBEUM010000001-NZ_JBBEUM010000033
//
LOCUS       NZ_JBJJOX010000000   4881017 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJJOX000000000
VERSION     NZ_JBJJOX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026081
            Assembly: GCF_045504355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4881017)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJJOX000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJJOX000000000.  This version of the project
            (01) has the accession number NZ_JBJJOX010000000, and consists of
            sequences JBJJOX010000001-JBJJOX010000098.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Chicken.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045504355.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:07:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,854
            CDSs (total)                      :: 4,754
            Genes (coding)                    :: 4,587
            CDSs (with protein)               :: 4,587
            Genes (RNA)                       :: 100
            rRNAs                             :: 2, 1, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 5 (5S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 15
            Pseudo Genes (total)              :: 167
            CDSs (without protein)            :: 167
            Pseudo Genes (ambiguous residues) :: 0 of 167
            Pseudo Genes (frameshifted)       :: 51 of 167
            Pseudo Genes (incomplete)         :: 129 of 167
            Pseudo Genes (internal stop)      :: 23 of 167
            Pseudo Genes (multiple problems)  :: 34 of 167
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4881017
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S1"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Weifang"
                     /collection_date="2019-01-01"
WGS         JBJJOX010000001-JBJJOX010000098
WGS_SCAFLD  NZ_JBJJOX010000001-NZ_JBJJOX010000098
//
LOCUS       NZ_JBJKBQ010000000   4901608 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S10, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKBQ000000000
VERSION     NZ_JBJKBQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026089
            Assembly: GCF_045503975.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4901608)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKBQ000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJKBQ000000000.  This version of the project
            (01) has the accession number NZ_JBJKBQ010000000, and consists of
            sequences JBJKBQ010000001-JBJKBQ010000124.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045503975.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:06:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,892
            CDSs (total)                      :: 4,800
            Genes (coding)                    :: 4,593
            CDSs (with protein)               :: 4,593
            Genes (RNA)                       :: 92
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 3 (16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 207
            CDSs (without protein)            :: 207
            Pseudo Genes (ambiguous residues) :: 0 of 207
            Pseudo Genes (frameshifted)       :: 70 of 207
            Pseudo Genes (incomplete)         :: 141 of 207
            Pseudo Genes (internal stop)      :: 30 of 207
            Pseudo Genes (multiple problems)  :: 32 of 207
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4901608
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S10"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Yantai"
                     /collection_date="2019-03-15"
WGS         JBJKBQ010000001-JBJKBQ010000124
WGS_SCAFLD  NZ_JBJKBQ010000001-NZ_JBJKBQ010000124
//
LOCUS       NZ_JBJKIY010000000   4717950 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S45, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKIY000000000
VERSION     NZ_JBJKIY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026104
            Assembly: GCF_045504815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4717950)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKIY000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJKIY000000000.  This version of the project
            (01) has the accession number NZ_JBJKIY010000000, and consists of
            sequences JBJKIY010000001-JBJKIY010000040.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Chicken.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045504815.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:04:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,655
            CDSs (total)                      :: 4,561
            Genes (coding)                    :: 4,367
            CDSs (with protein)               :: 4,367
            Genes (RNA)                       :: 94
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 76
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 194
            CDSs (without protein)            :: 194
            Pseudo Genes (ambiguous residues) :: 0 of 194
            Pseudo Genes (frameshifted)       :: 71 of 194
            Pseudo Genes (incomplete)         :: 137 of 194
            Pseudo Genes (internal stop)      :: 34 of 194
            Pseudo Genes (multiple problems)  :: 43 of 194
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4717950
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S45"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Liaocheng"
                     /collection_date="2021-04-09"
WGS         JBJKIY010000001-JBJKIY010000040
WGS_SCAFLD  NZ_JBJKIY010000001-NZ_JBJKIY010000040
//
LOCUS       NZ_JAJPNA010000000   6722023 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain 17905/2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAJPNA000000000
VERSION     NZ_JAJPNA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN23763281
            Assembly: GCF_022552975.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6722023)
  AUTHORS   Bocharova,Y., Savinova,T. and Chebotar,I.
  TITLE     Cystic fibrosis Pseudomonas aeruginosa
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6722023)
  AUTHORS   Bocharova,Y., Savinova,T. and Chebotar,I.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-DEC-2021) Laboratory of Molecular Microbiology,
            Pirogov Russian National Research Medical University, Ostrovitianov
            Str., Moscow 117997, Russia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAJPNA000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAJPNA000000000.  This version of the
            project (01) has the accession number NZ_JAJPNA010000000, and
            consists of sequences JAJPNA010000001-JAJPNA010000099.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. MAY-2021
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 6x
            Sequencing Technology  :: MGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_022552975.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:07:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,336
            CDSs (total)                      :: 6,270
            Genes (coding)                    :: 6,160
            CDSs (with protein)               :: 6,160
            Genes (RNA)                       :: 66
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 110
            CDSs (without protein)            :: 110
            Pseudo Genes (ambiguous residues) :: 0 of 110
            Pseudo Genes (frameshifted)       :: 27 of 110
            Pseudo Genes (incomplete)         :: 83 of 110
            Pseudo Genes (internal stop)      :: 6 of 110
            Pseudo Genes (multiple problems)  :: 5 of 110
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6722023
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="17905/2"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Russia: Moscow"
                     /collection_date="2020-01-18"
WGS         JAJPNA010000001-JAJPNA010000099
WGS_SCAFLD  NZ_JAJPNA010000001-NZ_JAJPNA010000099
//
LOCUS       NZ_JBJKBO010000000   4752350 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S8, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKBO000000000
VERSION     NZ_JBJKBO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026087
            Assembly: GCF_045503995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4752350)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKBO000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJKBO000000000.  This version of the project
            (01) has the accession number NZ_JBJKBO010000000, and consists of
            sequences JBJKBO010000001-JBJKBO010000037.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045503995.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:52:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,703
            CDSs (total)                      :: 4,610
            Genes (coding)                    :: 4,416
            CDSs (with protein)               :: 4,416
            Genes (RNA)                       :: 93
            rRNAs                             :: 1, 2 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 76
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 194
            CDSs (without protein)            :: 194
            Pseudo Genes (ambiguous residues) :: 0 of 194
            Pseudo Genes (frameshifted)       :: 72 of 194
            Pseudo Genes (incomplete)         :: 138 of 194
            Pseudo Genes (internal stop)      :: 32 of 194
            Pseudo Genes (multiple problems)  :: 43 of 194
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4752350
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S8"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Dongying"
                     /collection_date="2019-03-10"
WGS         JBJKBO010000001-JBJKBO010000037
WGS_SCAFLD  NZ_JBJKBO010000001-NZ_JBJKBO010000037
//
LOCUS       NZ_JBJKJF010000000   4721165 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S55, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKJF000000000
VERSION     NZ_JBJKJF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026112
            Assembly: GCF_045505065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4721165)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKJF000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJKJF000000000.  This version of the project
            (01) has the accession number NZ_JBJKJF010000000, and consists of
            sequences JBJKJF010000001-JBJKJF010000044.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Duck.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045505065.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:15:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,661
            CDSs (total)                      :: 4,568
            Genes (coding)                    :: 4,373
            CDSs (with protein)               :: 4,373
            Genes (RNA)                       :: 93
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 75
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 195
            CDSs (without protein)            :: 195
            Pseudo Genes (ambiguous residues) :: 0 of 195
            Pseudo Genes (frameshifted)       :: 71 of 195
            Pseudo Genes (incomplete)         :: 137 of 195
            Pseudo Genes (internal stop)      :: 35 of 195
            Pseudo Genes (multiple problems)  :: 43 of 195
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4721165
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S55"
                     /host="duck"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Liaocheng"
                     /collection_date="2021-05-25"
WGS         JBJKJF010000001-JBJKJF010000044
WGS_SCAFLD  NZ_JBJKJF010000001-NZ_JBJKJF010000044
//
LOCUS       NZ_JBJKIR010000000   4901155 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S36, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKIR000000000
VERSION     NZ_JBJKIR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026097
            Assembly: GCF_045504725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4901155)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKIR000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJKIR000000000.  This version of the project
            (01) has the accession number NZ_JBJKIR010000000, and consists of
            sequences JBJKIR010000001-JBJKIR010000127.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Duck.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045504725.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:12:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,893
            CDSs (total)                      :: 4,802
            Genes (coding)                    :: 4,594
            CDSs (with protein)               :: 4,594
            Genes (RNA)                       :: 91
            rRNAs                             :: 2, 3 (16S, 23S)
            partial rRNAs                     :: 2, 3 (16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 208
            CDSs (without protein)            :: 208
            Pseudo Genes (ambiguous residues) :: 0 of 208
            Pseudo Genes (frameshifted)       :: 70 of 208
            Pseudo Genes (incomplete)         :: 142 of 208
            Pseudo Genes (internal stop)      :: 30 of 208
            Pseudo Genes (multiple problems)  :: 32 of 208
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4901155
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S36"
                     /host="duck"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Liaocheng"
                     /collection_date="2020-12-14"
WGS         JBJKIR010000001-JBJKIR010000127
WGS_SCAFLD  NZ_JBJKIR010000001-NZ_JBJKIR010000127
//
LOCUS       NZ_JBJLKV010000000   4729194 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S67, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLKV000000000
VERSION     NZ_JBJLKV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026117
            Assembly: GCF_045566915.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4729194)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLKV000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJLKV000000000.  This version of the project
            (01) has the accession number NZ_JBJLKV010000000, and consists of
            sequences JBJLKV010000001-JBJLKV010000035.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Chicken.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045566915.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:26:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,670
            CDSs (total)                      :: 4,576
            Genes (coding)                    :: 4,384
            CDSs (with protein)               :: 4,384
            Genes (RNA)                       :: 94
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 76
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 192
            CDSs (without protein)            :: 192
            Pseudo Genes (ambiguous residues) :: 0 of 192
            Pseudo Genes (frameshifted)       :: 74 of 192
            Pseudo Genes (incomplete)         :: 134 of 192
            Pseudo Genes (internal stop)      :: 32 of 192
            Pseudo Genes (multiple problems)  :: 43 of 192
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4729194
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S67"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Qingdao"
                     /collection_date="2021-05-18"
WGS         JBJLKV010000001-JBJLKV010000035
WGS_SCAFLD  NZ_JBJLKV010000001-NZ_JBJLKV010000035
//
LOCUS       NZ_JBJKIU010000000   4901813 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S41, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKIU000000000
VERSION     NZ_JBJKIU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026100
            Assembly: GCF_045504495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4901813)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKIU000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJKIU000000000.  This version of the project
            (01) has the accession number NZ_JBJKIU010000000, and consists of
            sequences JBJKIU010000001-JBJKIU010000124.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Duck.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045504495.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:13:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,895
            CDSs (total)                      :: 4,801
            Genes (coding)                    :: 4,595
            CDSs (with protein)               :: 4,595
            Genes (RNA)                       :: 94
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 3 (16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 15
            Pseudo Genes (total)              :: 206
            CDSs (without protein)            :: 206
            Pseudo Genes (ambiguous residues) :: 0 of 206
            Pseudo Genes (frameshifted)       :: 70 of 206
            Pseudo Genes (incomplete)         :: 140 of 206
            Pseudo Genes (internal stop)      :: 30 of 206
            Pseudo Genes (multiple problems)  :: 32 of 206
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4901813
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S41"
                     /host="duck"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Liaocheng"
                     /collection_date="2020-12-14"
WGS         JBJKIU010000001-JBJKIU010000124
WGS_SCAFLD  NZ_JBJKIU010000001-NZ_JBJKIU010000124
//
LOCUS       NZ_RWWW01000000      6816524 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain B348, whole genome shotgun sequencing
            project.
ACCESSION   NZ_RWWW00000000
VERSION     NZ_RWWW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10523612
            Assembly: GCF_003954925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6816524)
  AUTHORS   D'Souza,R., Fouts,D., Singh,I. and Nguyen,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-DEC-2018) Informatics Core Services, JCVI, 9605
            Medical Center Drive, Rockville, MD 20850, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RWWW00000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_RWWW00000000.  This version of the project
            (01) has the accession number NZ_RWWW01000000, and consists of
            sequences RWWW01000001-RWWW01000117.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.1.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 137.55x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003954925.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:30:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,445
            CDSs (total)                      :: 6,375
            Genes (coding)                    :: 6,267
            CDSs (with protein)               :: 6,267
            Genes (RNA)                       :: 70
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 28 of 108
            Pseudo Genes (incomplete)         :: 80 of 108
            Pseudo Genes (internal stop)      :: 10 of 108
            Pseudo Genes (multiple problems)  :: 8 of 108
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6816524
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="B348"
                     /db_xref="taxon:287"
WGS         RWWW01000001-RWWW01000117
WGS_SCAFLD  NZ_RWWW01000001-NZ_RWWW01000117
//
LOCUS       NZ_JBJLKY010000000   4661656 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S84, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLKY000000000
VERSION     NZ_JBJLKY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026120
            Assembly: GCF_045569615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4661656)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLKY000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJLKY000000000.  This version of the project
            (01) has the accession number NZ_JBJLKY010000000, and consists of
            sequences JBJLKY010000001-JBJLKY010000031.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Chicken.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045569615.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:41:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,577
            CDSs (total)                      :: 4,486
            Genes (coding)                    :: 4,308
            CDSs (with protein)               :: 4,308
            Genes (RNA)                       :: 91
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 73
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 178
            CDSs (without protein)            :: 178
            Pseudo Genes (ambiguous residues) :: 0 of 178
            Pseudo Genes (frameshifted)       :: 65 of 178
            Pseudo Genes (incomplete)         :: 127 of 178
            Pseudo Genes (internal stop)      :: 31 of 178
            Pseudo Genes (multiple problems)  :: 40 of 178
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4661656
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S84"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Liaocheng"
                     /collection_date="2021-06-17"
WGS         JBJLKY010000001-JBJLKY010000031
WGS_SCAFLD  NZ_JBJLKY010000001-NZ_JBJLKY010000031
//
LOCUS       NZ_JBJKIN010000000   4749898 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S19, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKIN000000000
VERSION     NZ_JBJKIN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026093
            Assembly: GCF_045504895.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4749898)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKIN000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJKIN000000000.  This version of the project
            (01) has the accession number NZ_JBJKIN010000000, and consists of
            sequences JBJKIN010000001-JBJKIN010000028.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Chicken.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045504895.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:16:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,675
            CDSs (total)                      :: 4,589
            Genes (coding)                    :: 4,231
            CDSs (with protein)               :: 4,231
            Genes (RNA)                       :: 86
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 358
            CDSs (without protein)            :: 358
            Pseudo Genes (ambiguous residues) :: 0 of 358
            Pseudo Genes (frameshifted)       :: 184 of 358
            Pseudo Genes (incomplete)         :: 126 of 358
            Pseudo Genes (internal stop)      :: 107 of 358
            Pseudo Genes (multiple problems)  :: 50 of 358
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4749898
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S19"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Liaocheng"
                     /collection_date="2020-07-01"
WGS         JBJKIN010000001-JBJKIN010000028
WGS_SCAFLD  NZ_JBJKIN010000001-NZ_JBJKIN010000028
//
LOCUS       NZ_JAMZHZ010000000   4889550 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain SAL04029, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAMZHZ000000000
VERSION     NZ_JAMZHZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN29402820
            Assembly: GCF_027397315.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4889550)
  AUTHORS   Yue,M. and Zhou,X.
  TITLE     Salmonella sequencing
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4889550)
  AUTHORS   Yue,M. and Zhou,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-JUN-2022) College of Animal Sciences, Zhejiang
            University, Yuhangtang Road, Hangzhou 310058, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAMZHZ000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JAMZHZ000000000.  This version of the project
            (01) has the accession number NZ_JAMZHZ010000000, and consists of
            sequences JAMZHZ010000001-JAMZHZ010000432.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 290x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_027397315.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:50:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,057
            CDSs (total)                      :: 4,961
            Genes (coding)                    :: 4,498
            CDSs (with protein)               :: 4,498
            Genes (RNA)                       :: 96
            rRNAs                             :: 7, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 7, 3, 1 (5S, 16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 463
            CDSs (without protein)            :: 463
            Pseudo Genes (ambiguous residues) :: 0 of 463
            Pseudo Genes (frameshifted)       :: 190 of 463
            Pseudo Genes (incomplete)         :: 225 of 463
            Pseudo Genes (internal stop)      :: 109 of 463
            Pseudo Genes (multiple problems)  :: 52 of 463
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4889550
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="SAL04029"
                     /host="Aves"
                     /db_xref="taxon:28901"
WGS         JAMZHZ010000001-JAMZHZ010000432
WGS_SCAFLD  NZ_JAMZHZ010000001-NZ_JAMZHZ010000432
//
LOCUS       NZ_JBJKJE010000000   4751896 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S54, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKJE000000000
VERSION     NZ_JBJKJE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026111
            Assembly: GCF_045505055.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4751896)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKJE000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJKJE000000000.  This version of the project
            (01) has the accession number NZ_JBJKJE010000000, and consists of
            sequences JBJKJE010000001-JBJKJE010000037.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Chicken.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045505055.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:13:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,703
            CDSs (total)                      :: 4,610
            Genes (coding)                    :: 4,414
            CDSs (with protein)               :: 4,414
            Genes (RNA)                       :: 93
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 75
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 196
            CDSs (without protein)            :: 196
            Pseudo Genes (ambiguous residues) :: 0 of 196
            Pseudo Genes (frameshifted)       :: 73 of 196
            Pseudo Genes (incomplete)         :: 138 of 196
            Pseudo Genes (internal stop)      :: 33 of 196
            Pseudo Genes (multiple problems)  :: 43 of 196
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4751896
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S54"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Liaocheng"
                     /collection_date="2021-05-17"
WGS         JBJKJE010000001-JBJKJE010000037
WGS_SCAFLD  NZ_JBJKJE010000001-NZ_JBJKJE010000037
//
LOCUS       NZ_JBJKIM010000000   4749630 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S18, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKIM000000000
VERSION     NZ_JBJKIM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026092
            Assembly: GCF_045504705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4749630)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKIM000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJKIM000000000.  This version of the project
            (01) has the accession number NZ_JBJKIM010000000, and consists of
            sequences JBJKIM010000001-JBJKIM010000030.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Chicken.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045504705.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:12:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,673
            CDSs (total)                      :: 4,589
            Genes (coding)                    :: 4,232
            CDSs (with protein)               :: 4,232
            Genes (RNA)                       :: 84
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 357
            CDSs (without protein)            :: 357
            Pseudo Genes (ambiguous residues) :: 0 of 357
            Pseudo Genes (frameshifted)       :: 184 of 357
            Pseudo Genes (incomplete)         :: 125 of 357
            Pseudo Genes (internal stop)      :: 107 of 357
            Pseudo Genes (multiple problems)  :: 50 of 357
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4749630
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S18"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Liaocheng"
                     /collection_date="2020-07-01"
WGS         JBJKIM010000001-JBJKIM010000030
WGS_SCAFLD  NZ_JBJKIM010000001-NZ_JBJKIM010000030
//
LOCUS       NZ_JAMZHU010000000   4755457 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain SAL03447, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAMZHU000000000
VERSION     NZ_JAMZHU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN29402830
            Assembly: GCF_027397415.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4755457)
  AUTHORS   Yue,M. and Zhou,X.
  TITLE     Salmonella sequencing
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4755457)
  AUTHORS   Yue,M. and Zhou,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-JUN-2022) College of Animal Sciences, Zhejiang
            University, Yuhangtang Road, Hangzhou 310058, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAMZHU000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JAMZHU000000000.  This version of the project
            (01) has the accession number NZ_JAMZHU010000000, and consists of
            sequences JAMZHU010000001-JAMZHU010000032.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 290x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_027397415.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:42:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,703
            CDSs (total)                      :: 4,610
            Genes (coding)                    :: 4,242
            CDSs (with protein)               :: 4,242
            Genes (RNA)                       :: 93
            rRNAs                             :: 8, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 8, 2 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 368
            CDSs (without protein)            :: 368
            Pseudo Genes (ambiguous residues) :: 0 of 368
            Pseudo Genes (frameshifted)       :: 186 of 368
            Pseudo Genes (incomplete)         :: 131 of 368
            Pseudo Genes (internal stop)      :: 110 of 368
            Pseudo Genes (multiple problems)  :: 51 of 368
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4755457
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="SAL03447"
                     /host="Aves"
                     /db_xref="taxon:28901"
WGS         JAMZHU010000001-JAMZHU010000032
WGS_SCAFLD  NZ_JAMZHU010000001-NZ_JAMZHU010000032
//
LOCUS       NZ_JABLTW010000000   6962611 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PASP612, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JABLTW000000000
VERSION     NZ_JABLTW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14970744
            Assembly: GCF_013178425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6962611)
  AUTHORS   Ozer,E.A., Pincus,N.B. and Hauser,A.R.
  TITLE     Pseudomonas aeruginosa clinical isolates
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6962611)
  AUTHORS   Ozer,E.A., Pincus,N.B. and Hauser,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-MAY-2020) Medicine, Northwestern University Feinberg
            School of Medicine, 645 N Michigan Ave, Suite 900, Chicago, IL
            60611, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JABLTW000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JABLTW000000000.  This version of the
            project (01) has the accession number NZ_JABLTW010000000, and
            consists of sequences JABLTW010000001-JABLTW010000209.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 135.1241x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013178425.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:45:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,751
            CDSs (total)                      :: 6,682
            Genes (coding)                    :: 6,544
            CDSs (with protein)               :: 6,544
            Genes (RNA)                       :: 69
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 138
            CDSs (without protein)            :: 138
            Pseudo Genes (ambiguous residues) :: 0 of 138
            Pseudo Genes (frameshifted)       :: 23 of 138
            Pseudo Genes (incomplete)         :: 114 of 138
            Pseudo Genes (internal stop)      :: 6 of 138
            Pseudo Genes (multiple problems)  :: 5 of 138
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6962611
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PASP612"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Spain"
                     /collection_date="2008/2009"
                     /collected_by="Spanish Network for Research in Infectious
                     Diseases (REIPI)"
WGS         JABLTW010000001-JABLTW010000209
WGS_SCAFLD  NZ_JABLTW010000001-NZ_JABLTW010000209
//
LOCUS       NZ_JBJKBJ010000000   4693260 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKBJ000000000
VERSION     NZ_JBJKBJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026082
            Assembly: GCF_045504195.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4693260)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKBJ000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJKBJ000000000.  This version of the project
            (01) has the accession number NZ_JBJKBJ010000000, and consists of
            sequences JBJKBJ010000001-JBJKBJ010000037.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045504195.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:05:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,625
            CDSs (total)                      :: 4,532
            Genes (coding)                    :: 4,341
            CDSs (with protein)               :: 4,341
            Genes (RNA)                       :: 93
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 75
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 191
            CDSs (without protein)            :: 191
            Pseudo Genes (ambiguous residues) :: 0 of 191
            Pseudo Genes (frameshifted)       :: 72 of 191
            Pseudo Genes (incomplete)         :: 135 of 191
            Pseudo Genes (internal stop)      :: 32 of 191
            Pseudo Genes (multiple problems)  :: 43 of 191
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4693260
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S3"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Liaocheng"
                     /collection_date="2019-03-03"
WGS         JBJKBJ010000001-JBJKBJ010000037
WGS_SCAFLD  NZ_JBJKBJ010000001-NZ_JBJKBJ010000037
//
LOCUS       NZ_JBJKBR010000000   4901622 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S11, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKBR000000000
VERSION     NZ_JBJKBR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026090
            Assembly: GCF_045504095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4901622)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKBR000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJKBR000000000.  This version of the project
            (01) has the accession number NZ_JBJKBR010000000, and consists of
            sequences JBJKBR010000001-JBJKBR010000125.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045504095.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:57:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,896
            CDSs (total)                      :: 4,802
            Genes (coding)                    :: 4,595
            CDSs (with protein)               :: 4,595
            Genes (RNA)                       :: 94
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 3 (16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 15
            Pseudo Genes (total)              :: 207
            CDSs (without protein)            :: 207
            Pseudo Genes (ambiguous residues) :: 0 of 207
            Pseudo Genes (frameshifted)       :: 70 of 207
            Pseudo Genes (incomplete)         :: 141 of 207
            Pseudo Genes (internal stop)      :: 30 of 207
            Pseudo Genes (multiple problems)  :: 32 of 207
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4901622
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S11"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Yantai"
                     /collection_date="2019-03-15"
WGS         JBJKBR010000001-JBJKBR010000125
WGS_SCAFLD  NZ_JBJKBR010000001-NZ_JBJKBR010000125
//
LOCUS       NZ_JACELV010000000   6494441 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PHELES20, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JACELV000000000
VERSION     NZ_JACELV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14453472
            Assembly: GCF_013625685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6494441)
  AUTHORS   Moore,M.P. and Winstanley,C.
  TITLE     Transmission, adaptation and geographical spread of the Pseudomonas
            aeruginosa Liverpool Epidemic Strain
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6494441)
  AUTHORS   Moore,M.P. and Winstanley,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-MAY-2020) NDM, University of Oxford, Old Road Campus,
            Oxford OX37LF, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JACELV000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JACELV000000000.  This version of the
            project (01) has the accession number NZ_JACELV010000000, and
            consists of sequences JACELV010000001-JACELV010000100.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: A5-miseq v. 20140401
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 64.30x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013625685.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:59:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,158
            CDSs (total)                      :: 6,094
            Genes (coding)                    :: 5,987
            CDSs (with protein)               :: 5,987
            Genes (RNA)                       :: 64
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 107
            CDSs (without protein)            :: 107
            Pseudo Genes (ambiguous residues) :: 0 of 107
            Pseudo Genes (frameshifted)       :: 43 of 107
            Pseudo Genes (incomplete)         :: 58 of 107
            Pseudo Genes (internal stop)      :: 12 of 107
            Pseudo Genes (multiple problems)  :: 5 of 107
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6494441
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PHELES20"
                     /isolation_source="lung"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2012"
WGS         JACELV010000001-JACELV010000100
WGS_SCAFLD  NZ_JACELV010000001-NZ_JACELV010000100
//
LOCUS       NZ_JBJKIX010000000   4942703 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S44, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKIX000000000
VERSION     NZ_JBJKIX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026103
            Assembly: GCF_045504855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4942703)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKIX000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJKIX000000000.  This version of the project
            (01) has the accession number NZ_JBJKIX010000000, and consists of
            sequences JBJKIX010000001-JBJKIX010000089.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Duck.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045504855.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:06:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,934
            CDSs (total)                      :: 4,840
            Genes (coding)                    :: 4,659
            CDSs (with protein)               :: 4,659
            Genes (RNA)                       :: 94
            rRNAs                             :: 2, 5 (16S, 23S)
            partial rRNAs                     :: 2, 5 (16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 15
            Pseudo Genes (total)              :: 181
            CDSs (without protein)            :: 181
            Pseudo Genes (ambiguous residues) :: 0 of 181
            Pseudo Genes (frameshifted)       :: 72 of 181
            Pseudo Genes (incomplete)         :: 118 of 181
            Pseudo Genes (internal stop)      :: 29 of 181
            Pseudo Genes (multiple problems)  :: 34 of 181
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4942703
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S44"
                     /host="duck"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Heze"
                     /collection_date="2021-03-22"
WGS         JBJKIX010000001-JBJKIX010000089
WGS_SCAFLD  NZ_JBJKIX010000001-NZ_JBJKIX010000089
//
LOCUS       NZ_JAKLAF010000000   6900068 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain Pae-29652, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAKLAF000000000
VERSION     NZ_JAKLAF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN25248195
            Assembly: GCF_021891735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6900068)
  AUTHORS   Papagiannitsis,C.C., Medvecky,M., Chudejova,K., Skalova,A.,
            Rotova,V., Spanelova,P., Jakubu,V., Zemlickova,H. and Hrabak,J.
  CONSRTM   Czech Participants of the European Antimicrobial Resistance
            Surveillance Network
  TITLE     Molecular Characterization of Carbapenemase-Producing Pseudomonas
            aeruginosa of Czech Origin and Evidence for Clonal Spread of
            Extensively Resistant Sequence Type 357 Expressing IMP-7
            Metallo-beta-Lactamase
  JOURNAL   Antimicrob Agents Chemother 61 (12), e01811-17 (2017)
   PUBMED   28993328
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6900068)
  AUTHORS   Papagiannitsis,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2022) Department of Microbiology, Faculty of
            Medicine, Charles University, Alej Svobody, Pilsen 32300, Czech
            Republic
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAKLAF000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAKLAF000000000.  This version of the
            project (01) has the accession number NZ_JAKLAF010000000, and
            consists of sequences JAKLAF010000001-JAKLAF010000197.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.6.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_021891735.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:06:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,578
            CDSs (total)                      :: 6,507
            Genes (coding)                    :: 6,360
            CDSs (with protein)               :: 6,360
            Genes (RNA)                       :: 71
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 147
            CDSs (without protein)            :: 147
            Pseudo Genes (ambiguous residues) :: 0 of 147
            Pseudo Genes (frameshifted)       :: 31 of 147
            Pseudo Genes (incomplete)         :: 120 of 147
            Pseudo Genes (internal stop)      :: 8 of 147
            Pseudo Genes (multiple problems)  :: 10 of 147
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6900068
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="Pae-29652"
                     /isolation_source="clinical sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Czech Republic"
                     /collection_date="2015"
WGS         JAKLAF010000001-JAKLAF010000197
WGS_SCAFLD  NZ_JAKLAF010000001-NZ_JAKLAF010000197
//
LOCUS       NZ_JBJLKR010000000   4815534 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S56, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLKR000000000
VERSION     NZ_JBJLKR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026113
            Assembly: GCF_045566675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4815534)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLKR000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJLKR000000000.  This version of the project
            (01) has the accession number NZ_JBJLKR010000000, and consists of
            sequences JBJLKR010000001-JBJLKR010000059.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Duck.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045566675.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:29:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,796
            CDSs (total)                      :: 4,699
            Genes (coding)                    :: 4,545
            CDSs (with protein)               :: 4,545
            Genes (RNA)                       :: 97
            rRNAs                             :: 2, 2, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 5 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 154
            CDSs (without protein)            :: 154
            Pseudo Genes (ambiguous residues) :: 0 of 154
            Pseudo Genes (frameshifted)       :: 62 of 154
            Pseudo Genes (incomplete)         :: 107 of 154
            Pseudo Genes (internal stop)      :: 27 of 154
            Pseudo Genes (multiple problems)  :: 35 of 154
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4815534
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S56"
                     /host="duck"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Weifang"
                     /collection_date="2020-04-10"
WGS         JBJLKR010000001-JBJLKR010000059
WGS_SCAFLD  NZ_JBJLKR010000001-NZ_JBJLKR010000059
//
LOCUS       NZ_JBJLLB010000000   4849272 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S99, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLLB000000000
VERSION     NZ_JBJLLB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026123
            Assembly: GCF_045569635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4849272)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLLB000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJLLB000000000.  This version of the project
            (01) has the accession number NZ_JBJLLB010000000, and consists of
            sequences JBJLLB010000001-JBJLLB010000033.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Chicken.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045569635.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:23:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,803
            CDSs (total)                      :: 4,724
            Genes (coding)                    :: 4,366
            CDSs (with protein)               :: 4,366
            Genes (RNA)                       :: 79
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 358
            CDSs (without protein)            :: 358
            Pseudo Genes (ambiguous residues) :: 0 of 358
            Pseudo Genes (frameshifted)       :: 174 of 358
            Pseudo Genes (incomplete)         :: 133 of 358
            Pseudo Genes (internal stop)      :: 112 of 358
            Pseudo Genes (multiple problems)  :: 52 of 358
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4849272
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S99"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Liaocheng"
                     /collection_date="2021-08-07"
WGS         JBJLLB010000001-JBJLLB010000033
WGS_SCAFLD  NZ_JBJLLB010000001-NZ_JBJLLB010000033
//
LOCUS       NZ_JADDLY010000000   6371145 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PA_141, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JADDLY000000000
VERSION     NZ_JADDLY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN16505637
            Assembly: GCF_021441525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6371145)
  AUTHORS   Irum,S., Naz,K., Ullah,N., Mustafa,Z., Ali,A., Arslan,M., Khalid,K.
            and Andleeb,S.
  TITLE     Antimicrobial Resistance and Genomic Characterization of Six New
            Sequence Types in Multidrug-Resistant Pseudomonas aeruginosa
            Clinical Isolates from Pakistan
  JOURNAL   Antibiotics (Basel) 10 (11), 1386 (2021)
   PUBMED   34827324
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6371145)
  AUTHORS   Irum,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-OCT-2020) ASAB, National University of Science and
            Technology, H-12, Islamabad 44000, Pakistan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JADDLY000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JADDLY000000000.  This version of the
            project (01) has the accession number NZ_JADDLY010000000, and
            consists of sequences JADDLY010000001-JADDLY010000102.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 01-MAY-2018
            Assembly Method        :: SPAdes v. 3.14
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 22x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_021441525.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:44:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,989
            CDSs (total)                      :: 5,926
            Genes (coding)                    :: 5,805
            CDSs (with protein)               :: 5,805
            Genes (RNA)                       :: 63
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 121
            CDSs (without protein)            :: 121
            Pseudo Genes (ambiguous residues) :: 0 of 121
            Pseudo Genes (frameshifted)       :: 43 of 121
            Pseudo Genes (incomplete)         :: 91 of 121
            Pseudo Genes (internal stop)      :: 8 of 121
            Pseudo Genes (multiple problems)  :: 19 of 121
            CRISPR Arrays                     :: 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6371145
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PA_141"
                     /serotype="O13"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Pakistan"
                     /lat_lon="33.68 N 73.04 E"
                     /collection_date="2017"
                     /collected_by="Sidra Irum"
WGS         JADDLY010000001-JADDLY010000102
WGS_SCAFLD  NZ_JADDLY010000001-NZ_JADDLY010000102
//
LOCUS       NZ_JBJKJA010000000   4804736 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S50, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKJA000000000
VERSION     NZ_JBJKJA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026107
            Assembly: GCF_045505025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4804736)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKJA000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJKJA000000000.  This version of the project
            (01) has the accession number NZ_JBJKJA010000000, and consists of
            sequences JBJKJA010000001-JBJKJA010000103.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Chicken.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045505025.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:16:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,709
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,450
            CDSs (with protein)               :: 4,450
            Genes (RNA)                       :: 98
            rRNAs                             :: 3, 2, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 2, 5 (5S, 16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 161
            CDSs (without protein)            :: 161
            Pseudo Genes (ambiguous residues) :: 0 of 161
            Pseudo Genes (frameshifted)       :: 64 of 161
            Pseudo Genes (incomplete)         :: 123 of 161
            Pseudo Genes (internal stop)      :: 31 of 161
            Pseudo Genes (multiple problems)  :: 48 of 161
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4804736
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S50"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Liaocheng"
                     /collection_date="2021-04-09"
WGS         JBJKJA010000001-JBJKJA010000103
WGS_SCAFLD  NZ_JBJKJA010000001-NZ_JBJKJA010000103
//
LOCUS       NZ_CAADMQ010000000   6785862 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa isolate XDR-PA, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CAADMQ000000000
VERSION     NZ_CAADMQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5312773
            Assembly: GCF_900707725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1
  AUTHORS   Del Barrio-Tofino,E., Cabot,G., Oliver,A., Lopez-Causape,C. and
            Cortes,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-MAR-2019) Institut d'Investigacio Sanitaria de Palma,
            Microbiology, Ctra. Valldemossa, 79 - Mod (i) - Flat (-1), 07120,
            Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAADMQ000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_CAADMQ000000000.  This version of the
            project (01) has the accession number NZ_CAADMQ010000000, and
            consists of sequences CAADMQ010000001-CAADMQ010000938.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900707725.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:44:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,106
            CDSs (total)                      :: 7,072
            Genes (coding)                    :: 6,677
            CDSs (with protein)               :: 6,677
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 395
            CDSs (without protein)            :: 395
            Pseudo Genes (ambiguous residues) :: 0 of 395
            Pseudo Genes (frameshifted)       :: 32 of 395
            Pseudo Genes (incomplete)         :: 355 of 395
            Pseudo Genes (internal stop)      :: 10 of 395
            Pseudo Genes (multiple problems)  :: 2 of 395
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6785862
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /isolate="XDR-PA"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Spain"
                     /collection_date="2018"
                     /collected_by="GEMARA-SEIMC Pseudomonas study group"
WGS         CAADMQ010000001-CAADMQ010000938
WGS_SCAFLD  NZ_CAADMQ010000001-NZ_CAADMQ010000938
//
LOCUS       NZ_JBJLKX010000000   4662309 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S83, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLKX000000000
VERSION     NZ_JBJLKX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026119
            Assembly: GCF_045569655.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4662309)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLKX000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJLKX000000000.  This version of the project
            (01) has the accession number NZ_JBJLKX010000000, and consists of
            sequences JBJLKX010000001-JBJLKX010000032.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Chicken.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045569655.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:16:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,581
            CDSs (total)                      :: 4,486
            Genes (coding)                    :: 4,308
            CDSs (with protein)               :: 4,308
            Genes (RNA)                       :: 95
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 77
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 178
            CDSs (without protein)            :: 178
            Pseudo Genes (ambiguous residues) :: 0 of 178
            Pseudo Genes (frameshifted)       :: 65 of 178
            Pseudo Genes (incomplete)         :: 127 of 178
            Pseudo Genes (internal stop)      :: 31 of 178
            Pseudo Genes (multiple problems)  :: 40 of 178
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4662309
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S83"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Liaocheng"
                     /collection_date="2021-06-17"
WGS         JBJLKX010000001-JBJLKX010000032
WGS_SCAFLD  NZ_JBJLKX010000001-NZ_JBJLKX010000032
//
LOCUS       NZ_JBJKJD010000000   4700410 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S53, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKJD000000000
VERSION     NZ_JBJKJD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026110
            Assembly: GCF_045505115.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4700410)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKJD000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJKJD000000000.  This version of the project
            (01) has the accession number NZ_JBJKJD010000000, and consists of
            sequences JBJKJD010000001-JBJKJD010000038.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Chicken.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045505115.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:11:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,630
            CDSs (total)                      :: 4,541
            Genes (coding)                    :: 4,345
            CDSs (with protein)               :: 4,345
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 71
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 196
            CDSs (without protein)            :: 196
            Pseudo Genes (ambiguous residues) :: 0 of 196
            Pseudo Genes (frameshifted)       :: 75 of 196
            Pseudo Genes (incomplete)         :: 136 of 196
            Pseudo Genes (internal stop)      :: 34 of 196
            Pseudo Genes (multiple problems)  :: 44 of 196
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4700410
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S53"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Liaocheng"
                     /collection_date="2021-04-09"
WGS         JBJKJD010000001-JBJKJD010000038
WGS_SCAFLD  NZ_JBJKJD010000001-NZ_JBJKJD010000038
//
LOCUS       NZ_JBJLKU010000000   4880479 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S62, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLKU000000000
VERSION     NZ_JBJLKU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026116
            Assembly: GCF_045566335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4880479)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLKU000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJLKU000000000.  This version of the project
            (01) has the accession number NZ_JBJLKU010000000, and consists of
            sequences JBJLKU010000001-JBJLKU010000081.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Chicken.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045566335.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:22:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,850
            CDSs (total)                      :: 4,756
            Genes (coding)                    :: 4,610
            CDSs (with protein)               :: 4,610
            Genes (RNA)                       :: 94
            rRNAs                             :: 1, 3, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 6 (16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 146
            CDSs (without protein)            :: 146
            Pseudo Genes (ambiguous residues) :: 0 of 146
            Pseudo Genes (frameshifted)       :: 50 of 146
            Pseudo Genes (incomplete)         :: 116 of 146
            Pseudo Genes (internal stop)      :: 20 of 146
            Pseudo Genes (multiple problems)  :: 35 of 146
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4880479
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S62"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Qingdao"
                     /collection_date="2020-05-12"
WGS         JBJLKU010000001-JBJLKU010000081
WGS_SCAFLD  NZ_JBJLKU010000001-NZ_JBJLKU010000081
//
LOCUS       NZ_JBJKIW010000000   4725580 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S43, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKIW000000000
VERSION     NZ_JBJKIW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026102
            Assembly: GCF_045504965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4725580)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKIW000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJKIW000000000.  This version of the project
            (01) has the accession number NZ_JBJKIW010000000, and consists of
            sequences JBJKIW010000001-JBJKIW010000039.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Duck.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045504965.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:15:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,668
            CDSs (total)                      :: 4,572
            Genes (coding)                    :: 4,379
            CDSs (with protein)               :: 4,379
            Genes (RNA)                       :: 96
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 78
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 193
            CDSs (without protein)            :: 193
            Pseudo Genes (ambiguous residues) :: 0 of 193
            Pseudo Genes (frameshifted)       :: 71 of 193
            Pseudo Genes (incomplete)         :: 137 of 193
            Pseudo Genes (internal stop)      :: 33 of 193
            Pseudo Genes (multiple problems)  :: 43 of 193
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4725580
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S43"
                     /host="duck"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Liaocheng"
                     /collection_date="2021-01-06"
WGS         JBJKIW010000001-JBJKIW010000039
WGS_SCAFLD  NZ_JBJKIW010000001-NZ_JBJKIW010000039
//
LOCUS       NZ_JBJLLH010000000   4719814 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S173, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLLH000000000
VERSION     NZ_JBJLLH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026129
            Assembly: GCF_045569235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4719814)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLLH000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJLLH000000000.  This version of the project
            (01) has the accession number NZ_JBJLLH010000000, and consists of
            sequences JBJLLH010000001-JBJLLH010000044.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Chicken.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045569235.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:30:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,660
            CDSs (total)                      :: 4,567
            Genes (coding)                    :: 4,371
            CDSs (with protein)               :: 4,371
            Genes (RNA)                       :: 93
            rRNAs                             :: 2, 3 (16S, 23S)
            partial rRNAs                     :: 2, 3 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 196
            CDSs (without protein)            :: 196
            Pseudo Genes (ambiguous residues) :: 0 of 196
            Pseudo Genes (frameshifted)       :: 72 of 196
            Pseudo Genes (incomplete)         :: 138 of 196
            Pseudo Genes (internal stop)      :: 34 of 196
            Pseudo Genes (multiple problems)  :: 43 of 196
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4719814
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S173"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Jinan"
                     /collection_date="2022-07-04"
WGS         JBJLLH010000001-JBJLLH010000044
WGS_SCAFLD  NZ_JBJLLH010000001-NZ_JBJLLH010000044
//
LOCUS       NZ_JBJKJC010000000   4812902 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S52, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKJC000000000
VERSION     NZ_JBJKJC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026109
            Assembly: GCF_045505035.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4812902)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKJC000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJKJC000000000.  This version of the project
            (01) has the accession number NZ_JBJKJC010000000, and consists of
            sequences JBJKJC010000001-JBJKJC010000044.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Chicken.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045505035.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:19:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,766
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,476
            CDSs (with protein)               :: 4,476
            Genes (RNA)                       :: 86
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 68
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 204
            CDSs (without protein)            :: 204
            Pseudo Genes (ambiguous residues) :: 0 of 204
            Pseudo Genes (frameshifted)       :: 73 of 204
            Pseudo Genes (incomplete)         :: 144 of 204
            Pseudo Genes (internal stop)      :: 35 of 204
            Pseudo Genes (multiple problems)  :: 43 of 204
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4812902
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S52"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Liaocheng"
                     /collection_date="2021-04-09"
WGS         JBJKJC010000001-JBJKJC010000044
WGS_SCAFLD  NZ_JBJKJC010000001-NZ_JBJKJC010000044
//
LOCUS       NZ_JBJLLI010000000   4751529 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S174, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLLI000000000
VERSION     NZ_JBJLLI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026130
            Assembly: GCF_045569255.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4751529)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLLI000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJLLI000000000.  This version of the project
            (01) has the accession number NZ_JBJLLI010000000, and consists of
            sequences JBJLLI010000001-JBJLLI010000040.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Chicken.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045569255.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:41:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,705
            CDSs (total)                      :: 4,612
            Genes (coding)                    :: 4,417
            CDSs (with protein)               :: 4,417
            Genes (RNA)                       :: 93
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 75
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 195
            CDSs (without protein)            :: 195
            Pseudo Genes (ambiguous residues) :: 0 of 195
            Pseudo Genes (frameshifted)       :: 72 of 195
            Pseudo Genes (incomplete)         :: 138 of 195
            Pseudo Genes (internal stop)      :: 33 of 195
            Pseudo Genes (multiple problems)  :: 43 of 195
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4751529
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S174"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Weifang"
                     /collection_date="2022-06-10"
WGS         JBJLLI010000001-JBJLLI010000040
WGS_SCAFLD  NZ_JBJLLI010000001-NZ_JBJLLI010000040
//
LOCUS       NZ_JBJKIP010000000   4838700 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S22, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKIP000000000
VERSION     NZ_JBJKIP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026095
            Assembly: GCF_045504845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4838700)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKIP000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJKIP000000000.  This version of the project
            (01) has the accession number NZ_JBJKIP010000000, and consists of
            sequences JBJKIP010000001-JBJKIP010000035.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Chicken.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045504845.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:04:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,792
            CDSs (total)                      :: 4,713
            Genes (coding)                    :: 4,353
            CDSs (with protein)               :: 4,353
            Genes (RNA)                       :: 79
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 360
            CDSs (without protein)            :: 360
            Pseudo Genes (ambiguous residues) :: 0 of 360
            Pseudo Genes (frameshifted)       :: 179 of 360
            Pseudo Genes (incomplete)         :: 128 of 360
            Pseudo Genes (internal stop)      :: 112 of 360
            Pseudo Genes (multiple problems)  :: 51 of 360
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4838700
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S22"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Liaocheng"
                     /collection_date="2020-07-01"
WGS         JBJKIP010000001-JBJKIP010000035
WGS_SCAFLD  NZ_JBJKIP010000001-NZ_JBJKIP010000035
//
LOCUS       NZ_JBJKJB010000000   4925207 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S51, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKJB000000000
VERSION     NZ_JBJKJB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026108
            Assembly: GCF_045505015.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4925207)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKJB000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJKJB000000000.  This version of the project
            (01) has the accession number NZ_JBJKJB010000000, and consists of
            sequences JBJKJB010000001-JBJKJB010000092.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Chicken.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045505015.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:16:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,898
            CDSs (total)                      :: 4,799
            Genes (coding)                    :: 4,641
            CDSs (with protein)               :: 4,641
            Genes (RNA)                       :: 99
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 3 (16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 15
            Pseudo Genes (total)              :: 158
            CDSs (without protein)            :: 158
            Pseudo Genes (ambiguous residues) :: 0 of 158
            Pseudo Genes (frameshifted)       :: 46 of 158
            Pseudo Genes (incomplete)         :: 122 of 158
            Pseudo Genes (internal stop)      :: 23 of 158
            Pseudo Genes (multiple problems)  :: 30 of 158
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4925207
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S51"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Liaocheng"
                     /collection_date="2021-04-09"
WGS         JBJKJB010000001-JBJKJB010000092
WGS_SCAFLD  NZ_JBJKJB010000001-NZ_JBJKJB010000092
//
LOCUS       NZ_JBJLLK010000000   4721004 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S176, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLLK000000000
VERSION     NZ_JBJLLK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026132
            Assembly: GCF_045569335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4721004)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLLK000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJLLK000000000.  This version of the project
            (01) has the accession number NZ_JBJLLK010000000, and consists of
            sequences JBJLLK010000001-JBJLLK010000041.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Duck.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045569335.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:31:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,660
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,373
            CDSs (with protein)               :: 4,373
            Genes (RNA)                       :: 94
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 76
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 193
            CDSs (without protein)            :: 193
            Pseudo Genes (ambiguous residues) :: 0 of 193
            Pseudo Genes (frameshifted)       :: 71 of 193
            Pseudo Genes (incomplete)         :: 137 of 193
            Pseudo Genes (internal stop)      :: 33 of 193
            Pseudo Genes (multiple problems)  :: 43 of 193
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4721004
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S176"
                     /host="duck"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Liaocheng"
                     /collection_date="2022-03-18"
WGS         JBJLLK010000001-JBJLLK010000041
WGS_SCAFLD  NZ_JBJLLK010000001-NZ_JBJLLK010000041
//
LOCUS       NZ_AHSC01000000      1977039 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus mutans G123, whole genome shotgun sequencing project.
ACCESSION   NZ_AHSC00000000
VERSION     NZ_AHSC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02428931
            Assembly: GCF_000339815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus mutans G123
  ORGANISM  Streptococcus mutans G123
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1977039)
  AUTHORS   Cornejo,O.E., Lefebure,T., Bitar,P.D., Lang,P., Richards,V.P.,
            Eilertson,K., Do,T., Beighton,D., Zeng,L., Ahn,S.J., Burne,R.A.,
            Siepel,A., Bustamante,C.D. and Stanhope,M.J.
  TITLE     Evolutionary and population genomics of the cavity causing bacteria
            Streptococcus mutans
  JOURNAL   Mol Biol Evol 30 (4), 881-893 (2013)
   PUBMED   23228887
REFERENCE   2  (bases 1 to 1977039)
  AUTHORS   Lefebure,T., Suzuki,H., Pavinski Bitar,P.D., Burne,R.A. and
            Stanhope,M.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-JUL-2010) Population Medicine and Diagnostic
            Sciences, Cornell University, Ithaca, NY 14853, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AHSC00000000.1.
            The Streptococcus mutans G123 whole genome shotgun (WGS) project
            has the project accession NZ_AHSC00000000.  This version of the
            project (01) has the accession number NZ_AHSC01000000, and consists
            of sequences AHSC01000001-AHSC01000122.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 0.7.55
            Genome Coverage       :: 50x
            Sequencing Technology :: Illumina GAII single end reads
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000339815.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:21:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,948
            CDSs (total)                      :: 1,913
            Genes (coding)                    :: 1,844
            CDSs (with protein)               :: 1,844
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 31 of 69
            Pseudo Genes (incomplete)         :: 35 of 69
            Pseudo Genes (internal stop)      :: 21 of 69
            Pseudo Genes (multiple problems)  :: 14 of 69
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1977039
                     /organism="Streptococcus mutans G123"
                     /mol_type="genomic DNA"
                     /strain="G123"
                     /isolation_source="oral cavity"
                     /host="Homo sapiens"
                     /db_xref="taxon:857134"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2006"
WGS         AHSC01000001-AHSC01000122
WGS_SCAFLD  NZ_AHSC01000001-NZ_AHSC01000122
//
LOCUS       NZ_ALYQ01000000      2173582 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus mutans B12Sm1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ALYQ00000000
VERSION     NZ_ALYQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02641536
            Assembly: GCF_000522605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus mutans B12Sm1
  ORGANISM  Streptococcus mutans B12Sm1
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2173582)
  AUTHORS   Argimon,S., Konganti,K., Chen,H., Alekseyenko,A.V., Brown,S. and
            Caufield,P.W.
  TITLE     Comparative genomics of oral isolates of Streptococcus mutans by in
            silico genome subtraction does not reveal accessory DNA associated
            with severe early childhood caries
  JOURNAL   Infect Genet Evol 21, 269-278 (2014)
   PUBMED   24291226
REFERENCE   2  (bases 1 to 2173582)
  AUTHORS   Argimon,S., Brown,S. and Caufield,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-AUG-2012) New York University College of Dentistry,
            345 East 24th St, New York, NY 10010, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ALYQ00000000.1.
            The Streptococcus mutans B12Sm1 whole genome shotgun (WGS) project
            has the project accession NZ_ALYQ00000000.  This version of the
            project (01) has the accession number NZ_ALYQ01000000, and consists
            of sequences ALYQ01000001-ALYQ01000091.
            Bacteria and source DNA available from Dr. Page W. Caufield, NYU
            College of Dentistry, 345 E. 24th Street, New York, NY 10010, USA.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABySS v. 1.2.7
            Genome Coverage       :: 100.0x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000522605.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:03:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,163
            CDSs (total)                      :: 2,093
            Genes (coding)                    :: 1,999
            CDSs (with protein)               :: 1,999
            Genes (RNA)                       :: 70
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 94
            CDSs (without protein)            :: 94
            Pseudo Genes (ambiguous residues) :: 0 of 94
            Pseudo Genes (frameshifted)       :: 42 of 94
            Pseudo Genes (incomplete)         :: 57 of 94
            Pseudo Genes (internal stop)      :: 19 of 94
            Pseudo Genes (multiple problems)  :: 17 of 94
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2173582
                     /organism="Streptococcus mutans B12Sm1"
                     /mol_type="genomic DNA"
                     /strain="B12Sm1"
                     /isolation_source="oral cavity"
                     /host="Homo sapiens"
                     /db_xref="taxon:1225189"
                     /geo_loc_name="USA"
                     /collection_date="2003"
WGS         ALYQ01000001-ALYQ01000091
WGS_SCAFLD  NZ_ALYQ01000001-NZ_ALYQ01000091
//
LOCUS       NZ_ALYV01000000      2289140 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus mutans B24Sm2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ALYV00000000
VERSION     NZ_ALYV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02641541
            Assembly: GCF_000522705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus mutans B24Sm2
  ORGANISM  Streptococcus mutans B24Sm2
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2289140)
  AUTHORS   Argimon,S., Konganti,K., Chen,H., Alekseyenko,A.V., Brown,S. and
            Caufield,P.W.
  TITLE     Comparative genomics of oral isolates of Streptococcus mutans by in
            silico genome subtraction does not reveal accessory DNA associated
            with severe early childhood caries
  JOURNAL   Infect Genet Evol 21, 269-278 (2014)
   PUBMED   24291226
REFERENCE   2  (bases 1 to 2289140)
  AUTHORS   Argimon,S., Brown,S. and Caufield,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-AUG-2012) New York University College of Dentistry,
            345 East 24th St, New York, NY 10010, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ALYV00000000.1.
            The Streptococcus mutans B24Sm2 whole genome shotgun (WGS) project
            has the project accession NZ_ALYV00000000.  This version of the
            project (01) has the accession number NZ_ALYV01000000, and consists
            of sequences ALYV01000001-ALYV01000063.
            Bacteria and source DNA available from Dr. Page W. Caufield, NYU
            College of Dentistry, 345 E. 24th Street, New York, NY 10010, USA.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABySS v. 1.2.7
            Genome Coverage       :: 100.0x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000522705.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:09:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,200
            CDSs (total)                      :: 2,124
            Genes (coding)                    :: 2,022
            CDSs (with protein)               :: 2,022
            Genes (RNA)                       :: 76
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 102
            CDSs (without protein)            :: 102
            Pseudo Genes (ambiguous residues) :: 0 of 102
            Pseudo Genes (frameshifted)       :: 53 of 102
            Pseudo Genes (incomplete)         :: 59 of 102
            Pseudo Genes (internal stop)      :: 25 of 102
            Pseudo Genes (multiple problems)  :: 27 of 102
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2289140
                     /organism="Streptococcus mutans B24Sm2"
                     /mol_type="genomic DNA"
                     /strain="B24Sm2"
                     /isolation_source="oral cavity"
                     /host="Homo sapiens"
                     /db_xref="taxon:1225194"
                     /geo_loc_name="USA"
                     /collection_date="2004"
WGS         ALYV01000001-ALYV01000063
WGS_SCAFLD  NZ_ALYV01000001-NZ_ALYV01000063
//
LOCUS       NZ_ALZB01000000      2101922 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus mutans B85SM-B, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ALZB00000000
VERSION     NZ_ALZB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02641547
            Assembly: GCF_000522825.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus mutans B85SM-B
  ORGANISM  Streptococcus mutans B85SM-B
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2101922)
  AUTHORS   Argimon,S., Konganti,K., Chen,H., Alekseyenko,A.V., Brown,S. and
            Caufield,P.W.
  TITLE     Comparative genomics of oral isolates of Streptococcus mutans by in
            silico genome subtraction does not reveal accessory DNA associated
            with severe early childhood caries
  JOURNAL   Infect Genet Evol 21, 269-278 (2014)
   PUBMED   24291226
REFERENCE   2  (bases 1 to 2101922)
  AUTHORS   Argimon,S., Brown,S. and Caufield,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-AUG-2012) New York University College of Dentistry,
            345 East 24th St, New York, NY 10010, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ALZB00000000.1.
            The Streptococcus mutans B85SM-B whole genome shotgun (WGS) project
            has the project accession NZ_ALZB00000000.  This version of the
            project (01) has the accession number NZ_ALZB01000000, and consists
            of sequences ALZB01000001-ALZB01000046.
            Bacteria and source DNA available from Dr. Page W. Caufield, NYU
            College of Dentistry, 345 E. 24th Street, New York, NY 10010, USA.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABySS v. 1.2.7
            Genome Coverage       :: 100.0x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000522825.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:08:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,073
            CDSs (total)                      :: 1,991
            Genes (coding)                    :: 1,925
            CDSs (with protein)               :: 1,925
            Genes (RNA)                       :: 82
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 66
            CDSs (without protein)            :: 66
            Pseudo Genes (ambiguous residues) :: 0 of 66
            Pseudo Genes (frameshifted)       :: 30 of 66
            Pseudo Genes (incomplete)         :: 39 of 66
            Pseudo Genes (internal stop)      :: 20 of 66
            Pseudo Genes (multiple problems)  :: 18 of 66
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2101922
                     /organism="Streptococcus mutans B85SM-B"
                     /mol_type="genomic DNA"
                     /strain="B85SM-B"
                     /isolation_source="oral cavity"
                     /host="Homo sapiens"
                     /db_xref="taxon:1225200"
                     /geo_loc_name="USA"
                     /collection_date="2008"
WGS         ALZB01000001-ALZB01000046
WGS_SCAFLD  NZ_ALZB01000001-NZ_ALZB01000046
//
LOCUS       NZ_ALZG01000000      2110426 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus mutans B114SM-A, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ALZG00000000
VERSION     NZ_ALZG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02641552
            Assembly: GCF_000522925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus mutans B114SM-A
  ORGANISM  Streptococcus mutans B114SM-A
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2110426)
  AUTHORS   Argimon,S., Konganti,K., Chen,H., Alekseyenko,A.V., Brown,S. and
            Caufield,P.W.
  TITLE     Comparative genomics of oral isolates of Streptococcus mutans by in
            silico genome subtraction does not reveal accessory DNA associated
            with severe early childhood caries
  JOURNAL   Infect Genet Evol 21, 269-278 (2014)
   PUBMED   24291226
REFERENCE   2  (bases 1 to 2110426)
  AUTHORS   Argimon,S., Brown,S. and Caufield,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-AUG-2012) New York University College of Dentistry,
            345 East 24th St, New York, NY 10010, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ALZG00000000.1.
            The Streptococcus mutans B114SM-A whole genome shotgun (WGS)
            project has the project accession NZ_ALZG00000000.  This version of
            the project (01) has the accession number NZ_ALZG01000000, and
            consists of sequences ALZG01000001-ALZG01000053.
            Bacteria and source DNA available from Dr. Page W. Caufield, NYU
            College of Dentistry, 345 E. 24th Street, New York, NY 10010, USA.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABySS v. 1.2.7
            Genome Coverage       :: 100.0x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000522925.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:08:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,078
            CDSs (total)                      :: 1,994
            Genes (coding)                    :: 1,929
            CDSs (with protein)               :: 1,929
            Genes (RNA)                       :: 84
            rRNAs                             :: 7, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 37 of 65
            Pseudo Genes (incomplete)         :: 33 of 65
            Pseudo Genes (internal stop)      :: 24 of 65
            Pseudo Genes (multiple problems)  :: 24 of 65
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2110426
                     /organism="Streptococcus mutans B114SM-A"
                     /mol_type="genomic DNA"
                     /strain="B114SM-A"
                     /isolation_source="oral cavity"
                     /host="Homo sapiens"
                     /db_xref="taxon:1225204"
                     /geo_loc_name="USA"
                     /collection_date="2009"
WGS         ALZG01000001-ALZG01000053
WGS_SCAFLD  NZ_ALZG01000001-NZ_ALZG01000053
//
LOCUS       NZ_ALZH01000000      2283584 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus mutans B115SM-A, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ALZH00000000
VERSION     NZ_ALZH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02641553
            Assembly: GCF_000522945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus mutans B115SM-A
  ORGANISM  Streptococcus mutans B115SM-A
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2283584)
  AUTHORS   Argimon,S., Konganti,K., Chen,H., Alekseyenko,A.V., Brown,S. and
            Caufield,P.W.
  TITLE     Comparative genomics of oral isolates of Streptococcus mutans by in
            silico genome subtraction does not reveal accessory DNA associated
            with severe early childhood caries
  JOURNAL   Infect Genet Evol 21, 269-278 (2014)
   PUBMED   24291226
REFERENCE   2  (bases 1 to 2283584)
  AUTHORS   Argimon,S., Brown,S. and Caufield,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-AUG-2012) New York University College of Dentistry,
            345 East 24th St, New York, NY 10010, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ALZH00000000.1.
            The Streptococcus mutans B115SM-A whole genome shotgun (WGS)
            project has the project accession NZ_ALZH00000000.  This version of
            the project (01) has the accession number NZ_ALZH01000000, and
            consists of sequences ALZH01000001-ALZH01000049.
            Bacteria and source DNA available from Dr. Page W. Caufield, NYU
            College of Dentistry, 345 E. 24th Street, New York, NY 10010, USA.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABySS v. 1.2.7
            Genome Coverage       :: 100.0x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000522945.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:08:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,237
            CDSs (total)                      :: 2,190
            Genes (coding)                    :: 2,117
            CDSs (with protein)               :: 2,117
            Genes (RNA)                       :: 47
            rRNAs                             :: 3, 3 (16S, 23S)
            complete rRNAs                    :: 3, 3 (16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 73
            CDSs (without protein)            :: 73
            Pseudo Genes (ambiguous residues) :: 0 of 73
            Pseudo Genes (frameshifted)       :: 34 of 73
            Pseudo Genes (incomplete)         :: 40 of 73
            Pseudo Genes (internal stop)      :: 22 of 73
            Pseudo Genes (multiple problems)  :: 19 of 73
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2283584
                     /organism="Streptococcus mutans B115SM-A"
                     /mol_type="genomic DNA"
                     /strain="B115SM-A"
                     /isolation_source="oral cavity"
                     /host="Homo sapiens"
                     /db_xref="taxon:1225205"
                     /geo_loc_name="USA"
                     /collection_date="2009"
WGS         ALZH01000001-ALZH01000049
WGS_SCAFLD  NZ_ALZH01000001-NZ_ALZH01000049
//
LOCUS       NZ_ALZC01000000      2061948 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus mutans B88SM-A, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ALZC00000000
VERSION     NZ_ALZC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02641548
            Assembly: GCF_000522845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus mutans B88SM-A
  ORGANISM  Streptococcus mutans B88SM-A
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2061948)
  AUTHORS   Argimon,S., Konganti,K., Chen,H., Alekseyenko,A.V., Brown,S. and
            Caufield,P.W.
  TITLE     Comparative genomics of oral isolates of Streptococcus mutans by in
            silico genome subtraction does not reveal accessory DNA associated
            with severe early childhood caries
  JOURNAL   Infect Genet Evol 21, 269-278 (2014)
   PUBMED   24291226
REFERENCE   2  (bases 1 to 2061948)
  AUTHORS   Argimon,S., Brown,S. and Caufield,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-AUG-2012) New York University College of Dentistry,
            345 East 24th St, New York, NY 10010, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ALZC00000000.1.
            The Streptococcus mutans B88SM-A whole genome shotgun (WGS) project
            has the project accession NZ_ALZC00000000.  This version of the
            project (01) has the accession number NZ_ALZC01000000, and consists
            of sequences ALZC01000001-ALZC01000075.
            Bacteria and source DNA available from Dr. Page W. Caufield, NYU
            College of Dentistry, 345 E. 24th Street, New York, NY 10010, USA.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABySS v. 1.2.7
            Genome Coverage       :: 100.0x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000522845.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:09:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,051
            CDSs (total)                      :: 1,986
            Genes (coding)                    :: 1,915
            CDSs (with protein)               :: 1,915
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 35 of 71
            Pseudo Genes (incomplete)         :: 40 of 71
            Pseudo Genes (internal stop)      :: 21 of 71
            Pseudo Genes (multiple problems)  :: 19 of 71
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2061948
                     /organism="Streptococcus mutans B88SM-A"
                     /mol_type="genomic DNA"
                     /strain="B88SM-A"
                     /isolation_source="oral cavity"
                     /host="Homo sapiens"
                     /db_xref="taxon:1225201"
                     /geo_loc_name="USA"
                     /collection_date="2008"
WGS         ALZC01000001-ALZC01000075
WGS_SCAFLD  NZ_ALZC01000001-NZ_ALZC01000075
//
LOCUS       NZ_JBUEBV010000000   5002063 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Dublin strain
            SAL-24-526461, whole genome shotgun sequencing project.
ACCESSION   NZ_JBUEBV000000000
VERSION     NZ_JBUEBV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54991715
            Assembly: GCF_056163465.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Dublin
  ORGANISM  Salmonella enterica subsp. enterica serovar Dublin
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5002063)
  AUTHORS   Dezoysa,A.R., Edison,L.K., Kariyawasam,S., Bommineni,Y.R., Glick,L.
            and Denagamage,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JAN-2026) Department of Comparative, Diagnostic and
            Population Medicine, University of Florida, 1600 SW Archer Road,
            Gainesville, FL 32610, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBUEBV000000000.1.
            The Salmonella enterica subsp. enterica serovar Dublin whole genome
            shotgun (WGS) project has the project accession NZ_JBUEBV000000000.
            This version of the project (01) has the accession number
            NZ_JBUEBV010000000, and consists of sequences
            JBUEBV010000001-JBUEBV010000003.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 25.0.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1.0x
            Sequencing Technology  :: Illumina MiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056163465.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:52:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,969
            CDSs (total)                      :: 4,849
            Genes (coding)                    :: 4,600
            CDSs (with protein)               :: 4,600
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 17
            Pseudo Genes (total)              :: 249
            CDSs (without protein)            :: 249
            Pseudo Genes (ambiguous residues) :: 0 of 249
            Pseudo Genes (frameshifted)       :: 121 of 249
            Pseudo Genes (incomplete)         :: 123 of 249
            Pseudo Genes (internal stop)      :: 59 of 249
            Pseudo Genes (multiple problems)  :: 49 of 249
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5002063
                     /organism="Salmonella enterica subsp. enterica serovar
                     Dublin"
                     /mol_type="genomic DNA"
                     /strain="SAL-24-526461"
                     /serovar="Dublin"
                     /host="Bos taurus"
                     /sub_species="enterica"
                     /db_xref="taxon:98360"
                     /geo_loc_name="USA: Florida"
                     /collected_by="Clinical Microbiology, Parasitology, and
                     Serology Laboratory at the College of Veterinary Medicine
                     (CVM), University of Florida (UF)"
WGS         JBUEBV010000001-JBUEBV010000003
WGS_SCAFLD  NZ_CM149641
WGS_SCAFLD  NZ_JBUEBV010000002-NZ_JBUEBV010000003
//
LOCUS       NZ_JBUEBX010000000   5013301 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Dublin strain
            SAL-24-529737, whole genome shotgun sequencing project.
ACCESSION   NZ_JBUEBX000000000
VERSION     NZ_JBUEBX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54991741
            Assembly: GCF_056163505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Dublin
  ORGANISM  Salmonella enterica subsp. enterica serovar Dublin
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5013301)
  AUTHORS   Dezoysa,A.R., Edison,L.K., Kariyawasam,S., Bommineni,Y.R., Glick,L.
            and Denagamage,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JAN-2026) Department of Comparative, Diagnostic and
            Population Medicine, University of Florida, 1600 SW Archer Road,
            Gainesville, FL 32610, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBUEBX000000000.1.
            The Salmonella enterica subsp. enterica serovar Dublin whole genome
            shotgun (WGS) project has the project accession NZ_JBUEBX000000000.
            This version of the project (01) has the accession number
            NZ_JBUEBX010000000, and consists of sequences
            JBUEBX010000001-JBUEBX010000003.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 25.0.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1.0x
            Sequencing Technology  :: Illumina MiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056163505.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:54:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,986
            CDSs (total)                      :: 4,866
            Genes (coding)                    :: 4,609
            CDSs (with protein)               :: 4,609
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 17
            Pseudo Genes (total)              :: 257
            CDSs (without protein)            :: 257
            Pseudo Genes (ambiguous residues) :: 0 of 257
            Pseudo Genes (frameshifted)       :: 121 of 257
            Pseudo Genes (incomplete)         :: 132 of 257
            Pseudo Genes (internal stop)      :: 58 of 257
            Pseudo Genes (multiple problems)  :: 49 of 257
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5013301
                     /organism="Salmonella enterica subsp. enterica serovar
                     Dublin"
                     /mol_type="genomic DNA"
                     /strain="SAL-24-529737"
                     /serovar="Dublin"
                     /host="Bos taurus"
                     /sub_species="enterica"
                     /db_xref="taxon:98360"
                     /geo_loc_name="USA: Florida"
                     /collected_by="Clinical Microbiology, Parasitology, and
                     Serology Laboratory at the College of Veterinary Medicine
                     (CVM), University of Florida (UF)"
WGS         JBUEBX010000001-JBUEBX010000003
WGS_SCAFLD  NZ_CM149643
WGS_SCAFLD  NZ_JBUEBX010000002-NZ_JBUEBX010000003
//
LOCUS       NZ_JBUEBU010000000   5040985 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Dublin strain
            SAL-23-488122, whole genome shotgun sequencing project.
ACCESSION   NZ_JBUEBU000000000
VERSION     NZ_JBUEBU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54991714
            Assembly: GCF_056163445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Dublin
  ORGANISM  Salmonella enterica subsp. enterica serovar Dublin
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5040985)
  AUTHORS   Dezoysa,A.R., Edison,L.K., Kariyawasam,S., Bommineni,Y.R., Glick,L.
            and Denagamage,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JAN-2026) Department of Comparative, Diagnostic and
            Population Medicine, University of Florida, 1600 SW Archer Road,
            Gainesville, FL 32610, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBUEBU000000000.1.
            The Salmonella enterica subsp. enterica serovar Dublin whole genome
            shotgun (WGS) project has the project accession NZ_JBUEBU000000000.
            This version of the project (01) has the accession number
            NZ_JBUEBU010000000, and consists of sequences
            JBUEBU010000001-JBUEBU010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 25.0.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1.0x
            Sequencing Technology  :: Illumina MiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056163445.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:56:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,021
            CDSs (total)                      :: 4,901
            Genes (coding)                    :: 4,651
            CDSs (with protein)               :: 4,651
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 17
            Pseudo Genes (total)              :: 250
            CDSs (without protein)            :: 250
            Pseudo Genes (ambiguous residues) :: 0 of 250
            Pseudo Genes (frameshifted)       :: 119 of 250
            Pseudo Genes (incomplete)         :: 132 of 250
            Pseudo Genes (internal stop)      :: 56 of 250
            Pseudo Genes (multiple problems)  :: 52 of 250
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5040985
                     /organism="Salmonella enterica subsp. enterica serovar
                     Dublin"
                     /mol_type="genomic DNA"
                     /strain="SAL-23-488122"
                     /serovar="Dublin"
                     /host="Bos taurus"
                     /sub_species="enterica"
                     /db_xref="taxon:98360"
                     /geo_loc_name="USA: Florida"
                     /collected_by="Clinical Microbiology, Parasitology, and
                     Serology Laboratory at the College of Veterinary Medicine
                     (CVM), University of Florida (UF)"
WGS         JBUEBU010000001-JBUEBU010000002
WGS_SCAFLD  NZ_CM149640
WGS_SCAFLD  NZ_JBUEBU010000002
//
LOCUS       NZ_JBUEBW010000000   4989205 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Dublin strain
            SAL-24-529735, whole genome shotgun sequencing project.
ACCESSION   NZ_JBUEBW000000000
VERSION     NZ_JBUEBW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54991740
            Assembly: GCF_056163485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Dublin
  ORGANISM  Salmonella enterica subsp. enterica serovar Dublin
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4989205)
  AUTHORS   Dezoysa,A.R., Edison,L.K., Kariyawasam,S., Bommineni,Y.R., Glick,L.
            and Denagamage,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JAN-2026) Department of Comparative, Diagnostic and
            Population Medicine, University of Florida, 1600 SW Archer Road,
            Gainesville, FL 32610, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBUEBW000000000.1.
            The Salmonella enterica subsp. enterica serovar Dublin whole genome
            shotgun (WGS) project has the project accession NZ_JBUEBW000000000.
            This version of the project (01) has the accession number
            NZ_JBUEBW010000000, and consists of sequences
            JBUEBW010000001-JBUEBW010000003.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 25.0.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1.0x
            Sequencing Technology  :: Illumina MiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056163485.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 05:01:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,957
            CDSs (total)                      :: 4,837
            Genes (coding)                    :: 4,587
            CDSs (with protein)               :: 4,587
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 17
            Pseudo Genes (total)              :: 250
            CDSs (without protein)            :: 250
            Pseudo Genes (ambiguous residues) :: 0 of 250
            Pseudo Genes (frameshifted)       :: 120 of 250
            Pseudo Genes (incomplete)         :: 126 of 250
            Pseudo Genes (internal stop)      :: 58 of 250
            Pseudo Genes (multiple problems)  :: 49 of 250
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4989205
                     /organism="Salmonella enterica subsp. enterica serovar
                     Dublin"
                     /mol_type="genomic DNA"
                     /strain="SAL-24-529735"
                     /serovar="Dublin"
                     /host="Bos taurus"
                     /sub_species="enterica"
                     /db_xref="taxon:98360"
                     /geo_loc_name="USA: Florida"
                     /collected_by="Clinical Microbiology, Parasitology, and
                     Serology Laboratory at the College of Veterinary Medicine
                     (CVM), University of Florida (UF)"
WGS         JBUEBW010000001-JBUEBW010000003
WGS_SCAFLD  NZ_CM149642
WGS_SCAFLD  NZ_JBUEBW010000002-NZ_JBUEBW010000003
//
LOCUS       NZ_AHRL01000000      2005341 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus mutans 4SM1, whole genome shotgun sequencing project.
ACCESSION   NZ_AHRL00000000
VERSION     NZ_AHRL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02429083
            Assembly: GCF_000339175.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus mutans 4SM1
  ORGANISM  Streptococcus mutans 4SM1
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2005341)
  AUTHORS   Cornejo,O.E., Lefebure,T., Bitar,P.D., Lang,P., Richards,V.P.,
            Eilertson,K., Do,T., Beighton,D., Zeng,L., Ahn,S.J., Burne,R.A.,
            Siepel,A., Bustamante,C.D. and Stanhope,M.J.
  TITLE     Evolutionary and population genomics of the cavity causing bacteria
            Streptococcus mutans
  JOURNAL   Mol Biol Evol 30 (4), 881-893 (2013)
   PUBMED   23228887
REFERENCE   2  (bases 1 to 2005341)
  AUTHORS   Lefebure,T., Suzuki,H., Pavinski Bitar,P.D., Burne,R.A. and
            Stanhope,M.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JUL-2010) Population Medicine and Diagnostic
            Sciences, Cornell University, Ithaca, NY 14853, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AHRL00000000.1.
            The Streptococcus mutans 4SM1 whole genome shotgun (WGS) project
            has the project accession NZ_AHRL00000000.  This version of the
            project (01) has the accession number NZ_AHRL01000000, and consists
            of sequences AHRL01000001-AHRL01000097.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 0.7.55
            Genome Coverage       :: 50x
            Sequencing Technology :: Illumina GAII single end reads
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000339175.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:17:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,928
            CDSs (total)                      :: 1,893
            Genes (coding)                    :: 1,842
            CDSs (with protein)               :: 1,842
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 18 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 15 of 51
            Pseudo Genes (multiple problems)  :: 11 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2005341
                     /organism="Streptococcus mutans 4SM1"
                     /mol_type="genomic DNA"
                     /strain="4SM1"
                     /serotype="c"
                     /isolation_source="oral cavity"
                     /host="Homo sapiens"
                     /db_xref="taxon:857150"
                     /geo_loc_name="Brazil"
WGS         AHRL01000001-AHRL01000097
WGS_SCAFLD  NZ_AHRL01000001-NZ_AHRL01000097
//
LOCUS       NZ_JBUEBS010000000   5003848 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Dublin strain
            SAL-23-0005, whole genome shotgun sequencing project.
ACCESSION   NZ_JBUEBS000000000
VERSION     NZ_JBUEBS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54991711
            Assembly: GCF_056163405.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Dublin
  ORGANISM  Salmonella enterica subsp. enterica serovar Dublin
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5003848)
  AUTHORS   Dezoysa,A.R., Edison,L.K., Kariyawasam,S., Bommineni,Y.R.,
            Pellissery,A.J., Satharasinghe,D.A., Simon,D., Coiner,D. and
            Denagamage,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JAN-2026) Department of Comparative, Diagnostic and
            Population Medicine, University of Florida, 1600 SW Archer Road,
            Gainesville, FL 32610, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBUEBS000000000.1.
            The Salmonella enterica subsp. enterica serovar Dublin whole genome
            shotgun (WGS) project has the project accession NZ_JBUEBS000000000.
            This version of the project (01) has the accession number
            NZ_JBUEBS010000000, and consists of sequences
            JBUEBS010000001-JBUEBS010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 25.0.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1.0x
            Sequencing Technology  :: Illumina MiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056163405.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 05:02:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,850
            Genes (coding)                    :: 4,607
            CDSs (with protein)               :: 4,607
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 17
            Pseudo Genes (total)              :: 243
            CDSs (without protein)            :: 243
            Pseudo Genes (ambiguous residues) :: 0 of 243
            Pseudo Genes (frameshifted)       :: 118 of 243
            Pseudo Genes (incomplete)         :: 121 of 243
            Pseudo Genes (internal stop)      :: 58 of 243
            Pseudo Genes (multiple problems)  :: 49 of 243
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5003848
                     /organism="Salmonella enterica subsp. enterica serovar
                     Dublin"
                     /mol_type="genomic DNA"
                     /strain="SAL-23-0005"
                     /serovar="Dublin"
                     /host="Bos taurus"
                     /sub_species="enterica"
                     /db_xref="taxon:98360"
                     /geo_loc_name="USA: Florida"
                     /collected_by="Bronson Animal Disease Diagnostic
                     Laboratory (BADDL)"
WGS         JBUEBS010000001-JBUEBS010000002
WGS_SCAFLD  NZ_CM149639
WGS_SCAFLD  NZ_JBUEBS010000002
//
LOCUS       NZ_AHRN01000000      1965562 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus mutans 2ST1, whole genome shotgun sequencing project.
ACCESSION   NZ_AHRN00000000
VERSION     NZ_AHRN00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02428984
            Assembly: GCF_000339195.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus mutans 2ST1
  ORGANISM  Streptococcus mutans 2ST1
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1965562)
  AUTHORS   Cornejo,O.E., Lefebure,T., Bitar,P.D., Lang,P., Richards,V.P.,
            Eilertson,K., Do,T., Beighton,D., Zeng,L., Ahn,S.J., Burne,R.A.,
            Siepel,A., Bustamante,C.D. and Stanhope,M.J.
  TITLE     Evolutionary and population genomics of the cavity causing bacteria
            Streptococcus mutans
  JOURNAL   Mol Biol Evol 30 (4), 881-893 (2013)
   PUBMED   23228887
REFERENCE   2  (bases 1 to 1965562)
  AUTHORS   Lefebure,T., Suzuki,H., Pavinski Bitar,P.D., Burne,R.A. and
            Stanhope,M.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JUL-2010) Population Medicine and Diagnostic
            Sciences, Cornell University, Ithaca, NY 14853, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AHRN00000000.1.
            The Streptococcus mutans 2ST1 whole genome shotgun (WGS) project
            has the project accession NZ_AHRN00000000.  This version of the
            project (01) has the accession number NZ_AHRN01000000, and consists
            of sequences AHRN01000001-AHRN01000111.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 0.7.55
            Genome Coverage       :: 50x
            Sequencing Technology :: Illumina GAII single end reads
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000339195.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:18:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,940
            CDSs (total)                      :: 1,903
            Genes (coding)                    :: 1,853
            CDSs (with protein)               :: 1,853
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 30
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 26 of 50
            Pseudo Genes (incomplete)         :: 31 of 50
            Pseudo Genes (internal stop)      :: 17 of 50
            Pseudo Genes (multiple problems)  :: 20 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1965562
                     /organism="Streptococcus mutans 2ST1"
                     /mol_type="genomic DNA"
                     /strain="2ST1"
                     /serotype="e"
                     /isolation_source="oral cavity"
                     /host="Homo sapiens"
                     /db_xref="taxon:857148"
                     /geo_loc_name="Brazil"
WGS         AHRN01000001-AHRN01000111
WGS_SCAFLD  NZ_AHRN01000001-NZ_AHRN01000111
//
LOCUS       NZ_JBUEBP010000000   4977571 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Dublin strain
            SAL-20-0031, whole genome shotgun sequencing project.
ACCESSION   NZ_JBUEBP000000000
VERSION     NZ_JBUEBP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54991131
            Assembly: GCF_056163365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Dublin
  ORGANISM  Salmonella enterica subsp. enterica serovar Dublin
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4977571)
  AUTHORS   Dezoysa,A.R., Edison,L.K., Kariyawasam,S., Bommineni,Y.R.,
            Pellissery,A.J., Satharasinghe,D.A., Simon,D., Coiner,D. and
            Denagamage,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JAN-2026) Department of Comparative, Diagnostic and
            Population Medicine, University of Florida, 1600 SW Archer Road,
            Gainesville, FL 32610, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBUEBP000000000.1.
            The Salmonella enterica subsp. enterica serovar Dublin whole genome
            shotgun (WGS) project has the project accession NZ_JBUEBP000000000.
            This version of the project (01) has the accession number
            NZ_JBUEBP010000000, and consists of sequences
            JBUEBP010000001-JBUEBP010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 25.0.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1.0x
            Sequencing Technology  :: Illumina MiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056163365.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 05:08:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,950
            CDSs (total)                      :: 4,830
            Genes (coding)                    :: 4,574
            CDSs (with protein)               :: 4,574
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 17
            Pseudo Genes (total)              :: 256
            CDSs (without protein)            :: 256
            Pseudo Genes (ambiguous residues) :: 0 of 256
            Pseudo Genes (frameshifted)       :: 122 of 256
            Pseudo Genes (incomplete)         :: 130 of 256
            Pseudo Genes (internal stop)      :: 58 of 256
            Pseudo Genes (multiple problems)  :: 49 of 256
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4977571
                     /organism="Salmonella enterica subsp. enterica serovar
                     Dublin"
                     /mol_type="genomic DNA"
                     /strain="SAL-20-0031"
                     /serovar="Dublin"
                     /host="Bos taurus"
                     /sub_species="enterica"
                     /db_xref="taxon:98360"
                     /geo_loc_name="USA: Florida"
                     /collected_by="Bronson Animal Disease Diagnostic
                     Laboratory (BADDL)"
WGS         JBUEBP010000001-JBUEBP010000002
WGS_SCAFLD  NZ_CM149635
WGS_SCAFLD  NZ_JBUEBP010000002
//
LOCUS       NZ_AHRB01000000      1908740 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus mutans 8ID3, whole genome shotgun sequencing project.
ACCESSION   NZ_AHRB00000000
VERSION     NZ_AHRB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02429079
            Assembly: GCF_000339595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus mutans 8ID3
  ORGANISM  Streptococcus mutans 8ID3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1908740)
  AUTHORS   Cornejo,O.E., Lefebure,T., Bitar,P.D., Lang,P., Richards,V.P.,
            Eilertson,K., Do,T., Beighton,D., Zeng,L., Ahn,S.J., Burne,R.A.,
            Siepel,A., Bustamante,C.D. and Stanhope,M.J.
  TITLE     Evolutionary and population genomics of the cavity causing bacteria
            Streptococcus mutans
  JOURNAL   Mol Biol Evol 30 (4), 881-893 (2013)
   PUBMED   23228887
REFERENCE   2  (bases 1 to 1908740)
  AUTHORS   Lefebure,T., Suzuki,H., Pavinski Bitar,P.D., Burne,R.A. and
            Stanhope,M.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JUL-2010) Population Medicine and Diagnostic
            Sciences, Cornell University, Ithaca, NY 14853, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AHRB00000000.1.
            The Streptococcus mutans 8ID3 whole genome shotgun (WGS) project
            has the project accession NZ_AHRB00000000.  This version of the
            project (01) has the accession number NZ_AHRB01000000, and consists
            of sequences AHRB01000001-AHRB01000100.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 0.7.55
            Genome Coverage       :: 50x
            Sequencing Technology :: Illumina GAII single end reads
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000339595.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:21:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,892
            CDSs (total)                      :: 1,857
            Genes (coding)                    :: 1,792
            CDSs (with protein)               :: 1,792
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 37 of 65
            Pseudo Genes (incomplete)         :: 34 of 65
            Pseudo Genes (internal stop)      :: 20 of 65
            Pseudo Genes (multiple problems)  :: 22 of 65
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1908740
                     /organism="Streptococcus mutans 8ID3"
                     /mol_type="genomic DNA"
                     /strain="8ID3"
                     /serotype="c"
                     /isolation_source="oral cavity"
                     /host="Homo sapiens"
                     /db_xref="taxon:857153"
                     /geo_loc_name="Brazil"
WGS         AHRB01000001-AHRB01000100
WGS_SCAFLD  NZ_AHRB01000001-NZ_AHRB01000100
//
LOCUS       NZ_JBUEBR010000000   5000534 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Dublin strain
            SAL-22-0010, whole genome shotgun sequencing project.
ACCESSION   NZ_JBUEBR000000000
VERSION     NZ_JBUEBR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54991198
            Assembly: GCF_056163345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Dublin
  ORGANISM  Salmonella enterica subsp. enterica serovar Dublin
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5000534)
  AUTHORS   Dezoysa,A.R., Edison,L.K., Kariyawasam,S., Bommineni,Y.R.,
            Pellissery,A.J., Satharasinghe,D.A., Simon,D., Coiner,D. and
            Denagamage,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JAN-2026) Department of Comparative, Diagnostic and
            Population Medicine, University of Florida, 1600 SW Archer Road,
            Gainesville, FL 32610, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBUEBR000000000.1.
            The Salmonella enterica subsp. enterica serovar Dublin whole genome
            shotgun (WGS) project has the project accession NZ_JBUEBR000000000.
            This version of the project (01) has the accession number
            NZ_JBUEBR010000000, and consists of sequences
            JBUEBR010000001-JBUEBR010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 25.0.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1.0x
            Sequencing Technology  :: Illumina MiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056163345.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 05:07:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,976
            CDSs (total)                      :: 4,856
            Genes (coding)                    :: 4,572
            CDSs (with protein)               :: 4,572
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 17
            Pseudo Genes (total)              :: 284
            CDSs (without protein)            :: 284
            Pseudo Genes (ambiguous residues) :: 0 of 284
            Pseudo Genes (frameshifted)       :: 153 of 284
            Pseudo Genes (incomplete)         :: 127 of 284
            Pseudo Genes (internal stop)      :: 69 of 284
            Pseudo Genes (multiple problems)  :: 60 of 284
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5000534
                     /organism="Salmonella enterica subsp. enterica serovar
                     Dublin"
                     /mol_type="genomic DNA"
                     /strain="SAL-22-0010"
                     /serovar="Dublin"
                     /host="Bos taurus"
                     /sub_species="enterica"
                     /db_xref="taxon:98360"
                     /geo_loc_name="USA: Florida"
                     /collected_by="Bronson Animal Disease Diagnostic
                     Laboratory (BADDL)"
WGS         JBUEBR010000001-JBUEBR010000002
WGS_SCAFLD  NZ_CM149636
WGS_SCAFLD  NZ_JBUEBR010000002
//
LOCUS       NZ_AHSX01000000      1872370 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus mutans 1ID3, whole genome shotgun sequencing project.
ACCESSION   NZ_AHSX00000000
VERSION     NZ_AHSX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02429024
            Assembly: GCF_000340095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus mutans 1ID3
  ORGANISM  Streptococcus mutans 1ID3
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1872370)
  AUTHORS   Cornejo,O.E., Lefebure,T., Bitar,P.D., Lang,P., Richards,V.P.,
            Eilertson,K., Do,T., Beighton,D., Zeng,L., Ahn,S.J., Burne,R.A.,
            Siepel,A., Bustamante,C.D. and Stanhope,M.J.
  TITLE     Evolutionary and population genomics of the cavity causing bacteria
            Streptococcus mutans
  JOURNAL   Mol Biol Evol 30 (4), 881-893 (2013)
   PUBMED   23228887
REFERENCE   2  (bases 1 to 1872370)
  AUTHORS   Lefebure,T., Suzuki,H., Pavinski Bitar,P.D., Burne,R.A. and
            Stanhope,M.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-JUL-2010) Population Medicine and Diagnostic
            Sciences, Cornell University, Ithaca, NY 14853, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AHSX00000000.1.
            The Streptococcus mutans 1ID3 whole genome shotgun (WGS) project
            has the project accession NZ_AHSX00000000.  This version of the
            project (01) has the accession number NZ_AHSX01000000, and consists
            of sequences AHSX01000001-AHSX01000090.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 0.7.55
            Genome Coverage       :: 50x
            Sequencing Technology :: Illumina GAII single end reads
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000340095.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:26:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,848
            CDSs (total)                      :: 1,811
            Genes (coding)                    :: 1,737
            CDSs (with protein)               :: 1,737
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 30
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 74
            CDSs (without protein)            :: 74
            Pseudo Genes (ambiguous residues) :: 0 of 74
            Pseudo Genes (frameshifted)       :: 40 of 74
            Pseudo Genes (incomplete)         :: 33 of 74
            Pseudo Genes (internal stop)      :: 19 of 74
            Pseudo Genes (multiple problems)  :: 16 of 74
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1872370
                     /organism="Streptococcus mutans 1ID3"
                     /mol_type="genomic DNA"
                     /strain="1ID3"
                     /serotype="e"
                     /isolation_source="oral cavity"
                     /host="Homo sapiens"
                     /db_xref="taxon:857154"
                     /geo_loc_name="Brazil"
WGS         AHSX01000001-AHSX01000090
WGS_SCAFLD  NZ_AHSX01000001-NZ_AHSX01000090
//
LOCUS       NZ_JBUEBY010000000   5010755 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Dublin strain
            SAL-24-529738, whole genome shotgun sequencing project.
ACCESSION   NZ_JBUEBY000000000
VERSION     NZ_JBUEBY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54991748
            Assembly: GCF_056163525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Dublin
  ORGANISM  Salmonella enterica subsp. enterica serovar Dublin
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5010755)
  AUTHORS   Dezoysa,A.R., Edison,L.K., Kariyawasam,S., Bommineni,Y.R., Glick,L.
            and Denagamage,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JAN-2026) Department of Comparative, Diagnostic and
            Population Medicine, University of Florida, 1600 SW Archer Road,
            Gainesville, FL 32610, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBUEBY000000000.1.
            The Salmonella enterica subsp. enterica serovar Dublin whole genome
            shotgun (WGS) project has the project accession NZ_JBUEBY000000000.
            This version of the project (01) has the accession number
            NZ_JBUEBY010000000, and consists of sequences
            JBUEBY010000001-JBUEBY010000003.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 25.0.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1.0x
            Sequencing Technology  :: Illumina MiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056163525.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 05:08:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,984
            CDSs (total)                      :: 4,864
            Genes (coding)                    :: 4,611
            CDSs (with protein)               :: 4,611
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 17
            Pseudo Genes (total)              :: 253
            CDSs (without protein)            :: 253
            Pseudo Genes (ambiguous residues) :: 0 of 253
            Pseudo Genes (frameshifted)       :: 120 of 253
            Pseudo Genes (incomplete)         :: 130 of 253
            Pseudo Genes (internal stop)      :: 58 of 253
            Pseudo Genes (multiple problems)  :: 50 of 253
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5010755
                     /organism="Salmonella enterica subsp. enterica serovar
                     Dublin"
                     /mol_type="genomic DNA"
                     /strain="SAL-24-529738"
                     /serovar="Dublin"
                     /host="Bos taurus"
                     /sub_species="enterica"
                     /db_xref="taxon:98360"
                     /geo_loc_name="USA: Florida"
                     /collected_by="Clinical Microbiology, Parasitology, and
                     Serology Laboratory at the College of Veterinary Medicine
                     (CVM), University of Florida (UF)"
WGS         JBUEBY010000001-JBUEBY010000003
WGS_SCAFLD  NZ_CM149644
WGS_SCAFLD  NZ_JBUEBY010000002-NZ_JBUEBY010000003
//
LOCUS       NZ_JBUEBT010000000   5025891 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Dublin strain
            SAL-24-0001, whole genome shotgun sequencing project.
ACCESSION   NZ_JBUEBT000000000
VERSION     NZ_JBUEBT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54991712
            Assembly: GCF_056163415.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Dublin
  ORGANISM  Salmonella enterica subsp. enterica serovar Dublin
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5025891)
  AUTHORS   Dezoysa,A.R., Edison,L.K., Kariyawasam,S., Bommineni,Y.R.,
            Pellissery,A.J., Satharasinghe,D.A., Simon,D., Coiner,D. and
            Denagamage,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JAN-2026) Department of Comparative, Diagnostic and
            Population Medicine, University of Florida, 1600 SW Archer Road,
            Gainesville, FL 32610, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBUEBT000000000.1.
            The Salmonella enterica subsp. enterica serovar Dublin whole genome
            shotgun (WGS) project has the project accession NZ_JBUEBT000000000.
            This version of the project (01) has the accession number
            NZ_JBUEBT010000000, and consists of sequences
            JBUEBT010000001-JBUEBT010000003.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 25.0.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1.0x
            Sequencing Technology  :: Illumina MiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056163415.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 05:09:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,998
            CDSs (total)                      :: 4,878
            Genes (coding)                    :: 4,621
            CDSs (with protein)               :: 4,621
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 17
            Pseudo Genes (total)              :: 257
            CDSs (without protein)            :: 257
            Pseudo Genes (ambiguous residues) :: 0 of 257
            Pseudo Genes (frameshifted)       :: 121 of 257
            Pseudo Genes (incomplete)         :: 128 of 257
            Pseudo Genes (internal stop)      :: 61 of 257
            Pseudo Genes (multiple problems)  :: 48 of 257
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5025891
                     /organism="Salmonella enterica subsp. enterica serovar
                     Dublin"
                     /mol_type="genomic DNA"
                     /strain="SAL-24-0001"
                     /serovar="Dublin"
                     /host="Canis lupus familiaris"
                     /sub_species="enterica"
                     /db_xref="taxon:98360"
                     /geo_loc_name="USA: Florida"
                     /collected_by="Bronson Animal Disease Diagnostic
                     Laboratory (BADDL)"
WGS         JBUEBT010000001-JBUEBT010000003
WGS_SCAFLD  NZ_CM149638
WGS_SCAFLD  NZ_JBUEBT010000002-NZ_JBUEBT010000003
//
LOCUS       NZ_AHSY01000000      1969096 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus mutans 14D, whole genome shotgun sequencing project.
ACCESSION   NZ_AHSY00000000
VERSION     NZ_AHSY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02429069
            Assembly: GCF_000339515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus mutans 14D
  ORGANISM  Streptococcus mutans 14D
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1969096)
  AUTHORS   Cornejo,O.E., Lefebure,T., Bitar,P.D., Lang,P., Richards,V.P.,
            Eilertson,K., Do,T., Beighton,D., Zeng,L., Ahn,S.J., Burne,R.A.,
            Siepel,A., Bustamante,C.D. and Stanhope,M.J.
  TITLE     Evolutionary and population genomics of the cavity causing bacteria
            Streptococcus mutans
  JOURNAL   Mol Biol Evol 30 (4), 881-893 (2013)
   PUBMED   23228887
REFERENCE   2  (bases 1 to 1969096)
  AUTHORS   Lefebure,T., Suzuki,H., Pavinski Bitar,P.D., Burne,R.A. and
            Stanhope,M.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-JUL-2010) Population Medicine and Diagnostic
            Sciences, Cornell University, Ithaca, NY 14853, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AHSY00000000.1.
            The Streptococcus mutans 14D whole genome shotgun (WGS) project has
            the project accession NZ_AHSY00000000.  This version of the project
            (01) has the accession number NZ_AHSY01000000, and consists of
            sequences AHSY01000001-AHSY01000102.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 0.7.55
            Genome Coverage       :: 50x
            Sequencing Technology :: Illumina GAII single end reads
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000339515.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:23:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,943
            CDSs (total)                      :: 1,908
            Genes (coding)                    :: 1,849
            CDSs (with protein)               :: 1,849
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 29 of 59
            Pseudo Genes (incomplete)         :: 31 of 59
            Pseudo Genes (internal stop)      :: 17 of 59
            Pseudo Genes (multiple problems)  :: 13 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1969096
                     /organism="Streptococcus mutans 14D"
                     /mol_type="genomic DNA"
                     /strain="14D"
                     /isolation_source="oral cavity"
                     /host="Homo sapiens"
                     /db_xref="taxon:857113"
                     /geo_loc_name="Iceland"
                     /collection_date="1990"
WGS         AHSY01000001-AHSY01000102
WGS_SCAFLD  NZ_AHSY01000001-NZ_AHSY01000102
//
LOCUS       NZ_JBUEBQ010000000   5025930 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Dublin strain
            SAL-21-0004, whole genome shotgun sequencing project.
ACCESSION   NZ_JBUEBQ000000000
VERSION     NZ_JBUEBQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54991197
            Assembly: GCF_056163385.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Dublin
  ORGANISM  Salmonella enterica subsp. enterica serovar Dublin
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5025930)
  AUTHORS   Dezoysa,A.R., Edison,L.K., Kariyawasam,S., Bommineni,Y.R.,
            Pellissery,A.J., Satharasinghe,D.A., Simon,D., Coiner,D. and
            Denagamage,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JAN-2026) Department of Comparative, Diagnostic and
            Population Medicine, University of Florida, 1600 SW Archer Road,
            Gainesville, FL 32610, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBUEBQ000000000.1.
            The Salmonella enterica subsp. enterica serovar Dublin whole genome
            shotgun (WGS) project has the project accession NZ_JBUEBQ000000000.
            This version of the project (01) has the accession number
            NZ_JBUEBQ010000000, and consists of sequences
            JBUEBQ010000001-JBUEBQ010000003.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 25.0.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1.0x
            Sequencing Technology  :: Illumina MiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056163385.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 05:16:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,000
            CDSs (total)                      :: 4,880
            Genes (coding)                    :: 4,627
            CDSs (with protein)               :: 4,627
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 17
            Pseudo Genes (total)              :: 253
            CDSs (without protein)            :: 253
            Pseudo Genes (ambiguous residues) :: 0 of 253
            Pseudo Genes (frameshifted)       :: 119 of 253
            Pseudo Genes (incomplete)         :: 129 of 253
            Pseudo Genes (internal stop)      :: 59 of 253
            Pseudo Genes (multiple problems)  :: 49 of 253
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5025930
                     /organism="Salmonella enterica subsp. enterica serovar
                     Dublin"
                     /mol_type="genomic DNA"
                     /strain="SAL-21-0004"
                     /serovar="Dublin"
                     /host="Canis lupus familiaris"
                     /sub_species="enterica"
                     /db_xref="taxon:98360"
                     /geo_loc_name="USA: Florida"
                     /collected_by="Bronson Animal Disease Diagnostic
                     Laboratory (BADDL)"
WGS         JBUEBQ010000001-JBUEBQ010000003
WGS_SCAFLD  NZ_CM149637
WGS_SCAFLD  NZ_JBUEBQ010000002-NZ_JBUEBQ010000003
//
LOCUS       NZ_AHRO01000000      1921647 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus mutans 11A1, whole genome shotgun sequencing project.
ACCESSION   NZ_AHRO00000000
VERSION     NZ_AHRO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02429037
            Assembly: GCF_000339695.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus mutans 11A1
  ORGANISM  Streptococcus mutans 11A1
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1921647)
  AUTHORS   Cornejo,O.E., Lefebure,T., Bitar,P.D., Lang,P., Richards,V.P.,
            Eilertson,K., Do,T., Beighton,D., Zeng,L., Ahn,S.J., Burne,R.A.,
            Siepel,A., Bustamante,C.D. and Stanhope,M.J.
  TITLE     Evolutionary and population genomics of the cavity causing bacteria
            Streptococcus mutans
  JOURNAL   Mol Biol Evol 30 (4), 881-893 (2013)
   PUBMED   23228887
REFERENCE   2  (bases 1 to 1921647)
  AUTHORS   Lefebure,T., Suzuki,H., Pavinski Bitar,P.D., Burne,R.A. and
            Stanhope,M.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-JUL-2010) Population Medicine and Diagnostic
            Sciences, Cornell University, Ithaca, NY 14853, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AHRO00000000.1.
            The Streptococcus mutans 11A1 whole genome shotgun (WGS) project
            has the project accession NZ_AHRO00000000.  This version of the
            project (01) has the accession number NZ_AHRO01000000, and consists
            of sequences AHRO01000001-AHRO01000111.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 0.7.55
            Genome Coverage       :: 50x
            Sequencing Technology :: Illumina GAII single end reads
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000339695.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:35:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,914
            CDSs (total)                      :: 1,879
            Genes (coding)                    :: 1,810
            CDSs (with protein)               :: 1,810
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 31 of 69
            Pseudo Genes (incomplete)         :: 39 of 69
            Pseudo Genes (internal stop)      :: 23 of 69
            Pseudo Genes (multiple problems)  :: 20 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1921647
                     /organism="Streptococcus mutans 11A1"
                     /mol_type="genomic DNA"
                     /strain="11A1"
                     /isolation_source="oral cavity"
                     /host="Homo sapiens"
                     /db_xref="taxon:857155"
                     /geo_loc_name="Brazil"
WGS         AHRO01000001-AHRO01000111
WGS_SCAFLD  NZ_AHRO01000001-NZ_AHRO01000111
//
LOCUS       NZ_AHTA01000000      1953006 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus mutans 66-2A, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AHTA00000000
VERSION     NZ_AHTA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02428979
            Assembly: GCF_000340115.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus mutans 66-2A
  ORGANISM  Streptococcus mutans 66-2A
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1953006)
  AUTHORS   Cornejo,O.E., Lefebure,T., Bitar,P.D., Lang,P., Richards,V.P.,
            Eilertson,K., Do,T., Beighton,D., Zeng,L., Ahn,S.J., Burne,R.A.,
            Siepel,A., Bustamante,C.D. and Stanhope,M.J.
  TITLE     Evolutionary and population genomics of the cavity causing bacteria
            Streptococcus mutans
  JOURNAL   Mol Biol Evol 30 (4), 881-893 (2013)
   PUBMED   23228887
REFERENCE   2  (bases 1 to 1953006)
  AUTHORS   Lefebure,T., Suzuki,H., Pavinski Bitar,P.D., Burne,R.A. and
            Stanhope,M.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-JUL-2010) Population Medicine and Diagnostic
            Sciences, Cornell University, Ithaca, NY 14853, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AHTA00000000.1.
            The Streptococcus mutans 66-2A whole genome shotgun (WGS) project
            has the project accession NZ_AHTA00000000.  This version of the
            project (01) has the accession number NZ_AHTA01000000, and consists
            of sequences AHTA01000001-AHTA01000113.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 0.7.55
            Genome Coverage       :: 50x
            Sequencing Technology :: Illumina GAII single end reads
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000340115.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:41:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,908
            CDSs (total)                      :: 1,872
            Genes (coding)                    :: 1,809
            CDSs (with protein)               :: 1,809
            Genes (RNA)                       :: 36
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 32 of 63
            Pseudo Genes (incomplete)         :: 36 of 63
            Pseudo Genes (internal stop)      :: 16 of 63
            Pseudo Genes (multiple problems)  :: 16 of 63
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1953006
                     /organism="Streptococcus mutans 66-2A"
                     /mol_type="genomic DNA"
                     /strain="66-2A"
                     /isolation_source="oral cavity"
                     /host="Homo sapiens"
                     /db_xref="taxon:857111"
                     /geo_loc_name="Iceland"
                     /collection_date="1990"
WGS         AHTA01000001-AHTA01000113
WGS_SCAFLD  NZ_AHTA01000001-NZ_AHTA01000113
//
LOCUS       NZ_JBSAXL010000000   4527182 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Stenotrophomonas maltophilia strain Li1LvC2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSAXL000000000
VERSION     NZ_JBSAXL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50273552
            Assembly: GCF_056156665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
REFERENCE   1  (bases 1 to 4527182)
  AUTHORS   Knecht,C.A., Prack Mccormick,B., Alvarez,V.E., Buzzola,F.,
            Fuchs,J., Salgado,P., Campos,J., Quiroga,M.P. and Centron,D.
  TITLE     The use of glyphosate in agriculture contributes to the rise of
            species causing multidrug hospital-acquired infections
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4527182)
  AUTHORS   Knecht,C.A., Campos,J., Alvarez,V.E., Quiroga,M.P. and Centron,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JUL-2025) Institute of Research in Medical
            Microbiology and Parasitology, Universidad de Buenos Aires,
            CONICET, Paraguay 2155, Buenos Aires 1121, Argentina
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSAXL000000000.1.
            The Stenotrophomonas maltophilia whole genome shotgun (WGS) project
            has the project accession NZ_JBSAXL000000000.  This version of the
            project (01) has the accession number NZ_JBSAXL010000000, and
            consists of sequences JBSAXL010000001-JBSAXL010000028.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 430x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056156665.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:21:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,174
            CDSs (total)                      :: 4,099
            Genes (coding)                    :: 4,082
            CDSs (with protein)               :: 4,082
            Genes (RNA)                       :: 75
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 17
            CDSs (without protein)            :: 17
            Pseudo Genes (ambiguous residues) :: 0 of 17
            Pseudo Genes (frameshifted)       :: 3 of 17
            Pseudo Genes (incomplete)         :: 15 of 17
            Pseudo Genes (internal stop)      :: 2 of 17
            Pseudo Genes (multiple problems)  :: 3 of 17
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4527182
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /strain="Li1LvC2"
                     /isolation_source="sediment"
                     /db_xref="taxon:40324"
                     /geo_loc_name="Argentina: Ramsar site at the Parana Delta"
                     /lat_lon="34.2228988 S 58.8975770 W"
                     /collection_date="2020-12"
WGS         JBSAXL010000001-JBSAXL010000028
WGS_SCAFLD  NZ_JBSAXL010000001-NZ_JBSAXL010000028
//
LOCUS       NZ_AHRP01000000      1969615 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus mutans 11SSST2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AHRP00000000
VERSION     NZ_AHRP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02429084
            Assembly: GCF_000339715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus mutans 11SSST2
  ORGANISM  Streptococcus mutans 11SSST2
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1969615)
  AUTHORS   Cornejo,O.E., Lefebure,T., Bitar,P.D., Lang,P., Richards,V.P.,
            Eilertson,K., Do,T., Beighton,D., Zeng,L., Ahn,S.J., Burne,R.A.,
            Siepel,A., Bustamante,C.D. and Stanhope,M.J.
  TITLE     Evolutionary and population genomics of the cavity causing bacteria
            Streptococcus mutans
  JOURNAL   Mol Biol Evol 30 (4), 881-893 (2013)
   PUBMED   23228887
REFERENCE   2  (bases 1 to 1969615)
  AUTHORS   Lefebure,T., Suzuki,H., Pavinski Bitar,P.D., Burne,R.A. and
            Stanhope,M.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-JUL-2010) Population Medicine and Diagnostic
            Sciences, Cornell University, Ithaca, NY 14853, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AHRP00000000.1.
            The Streptococcus mutans 11SSST2 whole genome shotgun (WGS) project
            has the project accession NZ_AHRP00000000.  This version of the
            project (01) has the accession number NZ_AHRP01000000, and consists
            of sequences AHRP01000001-AHRP01000105.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 0.7.55
            Genome Coverage       :: 50x
            Sequencing Technology :: Illumina GAII single end reads
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000339715.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:45:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,952
            CDSs (total)                      :: 1,913
            Genes (coding)                    :: 1,839
            CDSs (with protein)               :: 1,839
            Genes (RNA)                       :: 39
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 74
            CDSs (without protein)            :: 74
            Pseudo Genes (ambiguous residues) :: 0 of 74
            Pseudo Genes (frameshifted)       :: 37 of 74
            Pseudo Genes (incomplete)         :: 42 of 74
            Pseudo Genes (internal stop)      :: 20 of 74
            Pseudo Genes (multiple problems)  :: 19 of 74
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1969615
                     /organism="Streptococcus mutans 11SSST2"
                     /mol_type="genomic DNA"
                     /strain="11SSST2"
                     /serotype="c"
                     /isolation_source="oral cavity"
                     /host="Homo sapiens"
                     /db_xref="taxon:857147"
                     /geo_loc_name="Brazil"
WGS         AHRP01000001-AHRP01000105
WGS_SCAFLD  NZ_AHRP01000001-NZ_AHRP01000105
//
LOCUS       NZ_ALYR01000000      2048211 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus mutans B084SM-A, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ALYR00000000
VERSION     NZ_ALYR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02641537
            Assembly: GCF_000522625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus mutans B084SM-A
  ORGANISM  Streptococcus mutans B084SM-A
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2048211)
  AUTHORS   Argimon,S., Konganti,K., Chen,H., Alekseyenko,A.V., Brown,S. and
            Caufield,P.W.
  TITLE     Comparative genomics of oral isolates of Streptococcus mutans by in
            silico genome subtraction does not reveal accessory DNA associated
            with severe early childhood caries
  JOURNAL   Infect Genet Evol 21, 269-278 (2014)
   PUBMED   24291226
REFERENCE   2  (bases 1 to 2048211)
  AUTHORS   Argimon,S., Brown,S. and Caufield,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-AUG-2012) New York University College of Dentistry,
            345 East 24th St, New York, NY 10010, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ALYR00000000.1.
            The Streptococcus mutans B084SM-A whole genome shotgun (WGS)
            project has the project accession NZ_ALYR00000000.  This version of
            the project (01) has the accession number NZ_ALYR01000000, and
            consists of sequences ALYR01000001-ALYR01000061.
            Bacteria and source DNA available from Dr. Page W. Caufield, NYU
            College of Dentistry, 345 E. 24th Street, New York, NY 10010, USA.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABySS v. 1.2.7
            Genome Coverage       :: 100.0x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000522625.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:01:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,040
            CDSs (total)                      :: 1,960
            Genes (coding)                    :: 1,885
            CDSs (with protein)               :: 1,885
            Genes (RNA)                       :: 80
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 45 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 17 of 75
            Pseudo Genes (multiple problems)  :: 20 of 75
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2048211
                     /organism="Streptococcus mutans B084SM-A"
                     /mol_type="genomic DNA"
                     /strain="B084SM-A"
                     /isolation_source="oral cavity"
                     /host="Homo sapiens"
                     /db_xref="taxon:1225190"
                     /geo_loc_name="USA"
                     /collection_date="2008"
WGS         ALYR01000001-ALYR01000061
WGS_SCAFLD  NZ_ALYR01000001-NZ_ALYR01000061
//
LOCUS       NZ_ALYX01000000      2259163 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus mutans B112SM-A, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ALYX00000000
VERSION     NZ_ALYX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02641543
            Assembly: GCF_000522745.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus mutans B112SM-A
  ORGANISM  Streptococcus mutans B112SM-A
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2259163)
  AUTHORS   Argimon,S., Konganti,K., Chen,H., Alekseyenko,A.V., Brown,S. and
            Caufield,P.W.
  TITLE     Comparative genomics of oral isolates of Streptococcus mutans by in
            silico genome subtraction does not reveal accessory DNA associated
            with severe early childhood caries
  JOURNAL   Infect Genet Evol 21, 269-278 (2014)
   PUBMED   24291226
REFERENCE   2  (bases 1 to 2259163)
  AUTHORS   Argimon,S., Brown,S. and Caufield,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-AUG-2012) New York University College of Dentistry,
            345 East 24th St, New York, NY 10010, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ALYX00000000.1.
            The Streptococcus mutans B112SM-A whole genome shotgun (WGS)
            project has the project accession NZ_ALYX00000000.  This version of
            the project (01) has the accession number NZ_ALYX01000000, and
            consists of sequences ALYX01000001-ALYX01000044.
            Bacteria and source DNA available from Dr. Page W. Caufield, NYU
            College of Dentistry, 345 E. 24th Street, New York, NY 10010, USA.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABySS v. 1.2.7
            Genome Coverage       :: 100.0x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000522745.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:06:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,225
            CDSs (total)                      :: 2,148
            Genes (coding)                    :: 2,070
            CDSs (with protein)               :: 2,070
            Genes (RNA)                       :: 77
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 78
            CDSs (without protein)            :: 78
            Pseudo Genes (ambiguous residues) :: 0 of 78
            Pseudo Genes (frameshifted)       :: 41 of 78
            Pseudo Genes (incomplete)         :: 47 of 78
            Pseudo Genes (internal stop)      :: 21 of 78
            Pseudo Genes (multiple problems)  :: 25 of 78
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2259163
                     /organism="Streptococcus mutans B112SM-A"
                     /mol_type="genomic DNA"
                     /strain="B112SM-A"
                     /isolation_source="oral cavity"
                     /host="Homo sapiens"
                     /db_xref="taxon:1225196"
                     /geo_loc_name="USA"
                     /collection_date="2009"
WGS         ALYX01000001-ALYX01000044
WGS_SCAFLD  NZ_ALYX01000001-NZ_ALYX01000044
//
LOCUS       NZ_JBSWVN010000000   2591614 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Staphylococcus warneri strain ABR4_003, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSWVN000000000
VERSION     NZ_JBSWVN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861975
            Assembly: GCF_056159605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus warneri
  ORGANISM  Staphylococcus warneri
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2591614)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWVN000000000.1.
            The Staphylococcus warneri whole genome shotgun (WGS) project has
            the project accession NZ_JBSWVN000000000.  This version of the
            project (01) has the accession number NZ_JBSWVN010000000, and
            consists of sequences JBSWVN010000001-JBSWVN010000006.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 939x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056159605.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:06:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,562
            CDSs (total)                      :: 2,475
            Genes (coding)                    :: 2,430
            CDSs (with protein)               :: 2,430
            Genes (RNA)                       :: 87
            rRNAs                             :: 7, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 45
            CDSs (without protein)            :: 45
            Pseudo Genes (ambiguous residues) :: 0 of 45
            Pseudo Genes (frameshifted)       :: 11 of 45
            Pseudo Genes (incomplete)         :: 24 of 45
            Pseudo Genes (internal stop)      :: 13 of 45
            Pseudo Genes (multiple problems)  :: 3 of 45
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2591614
                     /organism="Staphylococcus warneri"
                     /mol_type="genomic DNA"
                     /strain="ABR4_003"
                     /isolation_source="Marine"
                     /db_xref="taxon:1292"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWVN010000001-JBSWVN010000006
WGS_SCAFLD  NZ_JBSWVN010000001-NZ_JBSWVN010000006
//
LOCUS       NZ_ALYS01000000      2102707 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus mutans B107SM-B, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ALYS00000000
VERSION     NZ_ALYS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02641538
            Assembly: GCF_000522645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus mutans B107SM-B
  ORGANISM  Streptococcus mutans B107SM-B
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2102707)
  AUTHORS   Argimon,S., Konganti,K., Chen,H., Alekseyenko,A.V., Brown,S. and
            Caufield,P.W.
  TITLE     Comparative genomics of oral isolates of Streptococcus mutans by in
            silico genome subtraction does not reveal accessory DNA associated
            with severe early childhood caries
  JOURNAL   Infect Genet Evol 21, 269-278 (2014)
   PUBMED   24291226
REFERENCE   2  (bases 1 to 2102707)
  AUTHORS   Argimon,S., Brown,S. and Caufield,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-AUG-2012) New York University College of Dentistry,
            345 East 24th St, New York, NY 10010, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ALYS00000000.1.
            The Streptococcus mutans B107SM-B whole genome shotgun (WGS)
            project has the project accession NZ_ALYS00000000.  This version of
            the project (01) has the accession number NZ_ALYS01000000, and
            consists of sequences ALYS01000001-ALYS01000057.
            Bacteria and source DNA available from Dr. Page W. Caufield, NYU
            College of Dentistry, 345 E. 24th Street, New York, NY 10010, USA.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: BySS v. 1.2.7
            Genome Coverage       :: 100.0x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000522645.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:08:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,074
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 1,936
            CDSs (with protein)               :: 1,936
            Genes (RNA)                       :: 62
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 35 of 76
            Pseudo Genes (incomplete)         :: 44 of 76
            Pseudo Genes (internal stop)      :: 18 of 76
            Pseudo Genes (multiple problems)  :: 16 of 76
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2102707
                     /organism="Streptococcus mutans B107SM-B"
                     /mol_type="genomic DNA"
                     /strain="B107SM-B"
                     /isolation_source="oral cavity"
                     /host="Homo sapiens"
                     /db_xref="taxon:1225191"
                     /geo_loc_name="USA"
                     /collection_date="2009"
WGS         ALYS01000001-ALYS01000057
WGS_SCAFLD  NZ_ALYS01000001-NZ_ALYS01000057
//
LOCUS       NZ_ALYW01000000      2095204 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus mutans B102SM-B, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ALYW00000000
VERSION     NZ_ALYW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02641542
            Assembly: GCF_000522725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus mutans B102SM-B
  ORGANISM  Streptococcus mutans B102SM-B
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2095204)
  AUTHORS   Argimon,S., Konganti,K., Chen,H., Alekseyenko,A.V., Brown,S. and
            Caufield,P.W.
  TITLE     Comparative genomics of oral isolates of Streptococcus mutans by in
            silico genome subtraction does not reveal accessory DNA associated
            with severe early childhood caries
  JOURNAL   Infect Genet Evol 21, 269-278 (2014)
   PUBMED   24291226
REFERENCE   2  (bases 1 to 2095204)
  AUTHORS   Argimon,S., Brown,S. and Caufield,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-AUG-2012) New York University College of Dentistry,
            345 East 24th St, New York, NY 10010, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ALYW00000000.1.
            The Streptococcus mutans B102SM-B whole genome shotgun (WGS)
            project has the project accession NZ_ALYW00000000.  This version of
            the project (01) has the accession number NZ_ALYW01000000, and
            consists of sequences ALYW01000001-ALYW01000104.
            Bacteria and source DNA available from Dr. Page W. Caufield, NYU
            College of Dentistry, 345 E. 24th Street, New York, NY 10010, USA.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: ABySS v. 1.2.7
            Genome Coverage       :: 100.0x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000522725.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:07:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,094
            CDSs (total)                      :: 2,032
            Genes (coding)                    :: 1,958
            CDSs (with protein)               :: 1,958
            Genes (RNA)                       :: 62
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 4, 4 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 74
            CDSs (without protein)            :: 74
            Pseudo Genes (ambiguous residues) :: 0 of 74
            Pseudo Genes (frameshifted)       :: 37 of 74
            Pseudo Genes (incomplete)         :: 45 of 74
            Pseudo Genes (internal stop)      :: 17 of 74
            Pseudo Genes (multiple problems)  :: 20 of 74
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2095204
                     /organism="Streptococcus mutans B102SM-B"
                     /mol_type="genomic DNA"
                     /strain="B102SM-B"
                     /isolation_source="oral cavity"
                     /host="Homo sapiens"
                     /db_xref="taxon:1225195"
                     /geo_loc_name="USA"
                     /collection_date="2009"
WGS         ALYW01000001-ALYW01000104
WGS_SCAFLD  NZ_ALYW01000001-NZ_ALYW01000104
//
LOCUS       NZ_QBGM01000000      4981708 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain
            E68C2, whole genome shotgun sequencing project.
ACCESSION   NZ_QBGM00000000
VERSION     NZ_QBGM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08897974
            Assembly: GCF_003065705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar 4,[5],12:i:-
  ORGANISM  Salmonella enterica subsp. enterica serovar 4,[5],12:i:-
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4981708)
  AUTHORS   Gonzalez,S., Vinasco,J., Marino-Ramirez,L. and Norman,K.N.
  TITLE     Salmonella enterica WGS
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4981708)
  AUTHORS   Gonzalez,S., Vinasco,J., Marino-Ramirez,L. and Norman,K.N.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2018) NCBI / NLM, NIH, 8600 Rockville Pike,
            Bethesda, MD 20894, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QBGM00000000.1.
            The Salmonella enterica subsp. enterica serovar 4,[5],12:i:- whole
            genome shotgun (WGS) project has the project accession
            NZ_QBGM00000000.  This version of the project (01) has the
            accession number NZ_QBGM01000000, and consists of sequences
            QBGM01000001-QBGM01000121.
            Bacteria and source DNA available from Selma Gonzalez -
            sgonzalez@cvm.tamu.edu.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003065705.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:55:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,008
            CDSs (total)                      :: 4,877
            Genes (coding)                    :: 4,725
            CDSs (with protein)               :: 4,725
            Genes (RNA)                       :: 131
            rRNAs                             :: 8, 10, 15 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 1 (5S, 16S)
            partial rRNAs                     :: 9, 15 (16S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 16
            Pseudo Genes (total)              :: 152
            CDSs (without protein)            :: 152
            Pseudo Genes (ambiguous residues) :: 0 of 152
            Pseudo Genes (frameshifted)       :: 34 of 152
            Pseudo Genes (incomplete)         :: 132 of 152
            Pseudo Genes (internal stop)      :: 16 of 152
            Pseudo Genes (multiple problems)  :: 28 of 152
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4981708
                     /organism="Salmonella enterica subsp. enterica serovar
                     4,[5],12:i:-"
                     /mol_type="genomic DNA"
                     /strain="E68C2"
                     /serovar="4,[5],12:i:-"
                     /isolation_source="swine"
                     /sub_species="enterica"
                     /db_xref="taxon:440524"
                     /geo_loc_name="USA: TX"
                     /lat_lon="30.63 N 96.33 W"
                     /collection_date="2015-09-25"
                     /collected_by="USDA in College Station, TX"
WGS         QBGM01000001-QBGM01000121
WGS_SCAFLD  NZ_QBGM01000001-NZ_QBGM01000121
//
LOCUS       NZ_JBSWUL010000000   2808386 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Staphylococcus ureilyticus strain ABD2_031, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSWUL000000000
VERSION     NZ_JBSWUL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862007
            Assembly: GCF_056159045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus ureilyticus
  ORGANISM  Staphylococcus ureilyticus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus; Staphylococcus cohnii species
            complex.
REFERENCE   1  (bases 1 to 2808386)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWUL000000000.1.
            The Staphylococcus ureilyticus whole genome shotgun (WGS) project
            has the project accession NZ_JBSWUL000000000.  This version of the
            project (01) has the accession number NZ_JBSWUL010000000, and
            consists of sequences JBSWUL010000001-JBSWUL010000017.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1281x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056159045.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:10:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,759
            CDSs (total)                      :: 2,674
            Genes (coding)                    :: 2,614
            CDSs (with protein)               :: 2,614
            Genes (RNA)                       :: 85
            rRNAs                             :: 7, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 60
            CDSs (without protein)            :: 60
            Pseudo Genes (ambiguous residues) :: 0 of 60
            Pseudo Genes (frameshifted)       :: 29 of 60
            Pseudo Genes (incomplete)         :: 36 of 60
            Pseudo Genes (internal stop)      :: 10 of 60
            Pseudo Genes (multiple problems)  :: 13 of 60
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2808386
                     /organism="Staphylococcus ureilyticus"
                     /mol_type="genomic DNA"
                     /strain="ABD2_031"
                     /isolation_source="Marine"
                     /db_xref="taxon:94138"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWUL010000001-JBSWUL010000017
WGS_SCAFLD  NZ_JBSWUL010000001-NZ_JBSWUL010000017
//
LOCUS       NZ_JBSWXA010000000   2483421 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Staphylococcus pasteuri strain ABV4_149, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSWXA000000000
VERSION     NZ_JBSWXA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861932
            Assembly: GCF_056160365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus pasteuri
  ORGANISM  Staphylococcus pasteuri
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2483421)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWXA000000000.1.
            The Staphylococcus pasteuri whole genome shotgun (WGS) project has
            the project accession NZ_JBSWXA000000000.  This version of the
            project (01) has the accession number NZ_JBSWXA010000000, and
            consists of sequences JBSWXA010000001-JBSWXA010000042.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 205x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056160365.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:26:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,449
            CDSs (total)                      :: 2,373
            Genes (coding)                    :: 2,318
            CDSs (with protein)               :: 2,318
            Genes (RNA)                       :: 76
            rRNAs                             :: 5, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 55
            CDSs (without protein)            :: 55
            Pseudo Genes (ambiguous residues) :: 0 of 55
            Pseudo Genes (frameshifted)       :: 21 of 55
            Pseudo Genes (incomplete)         :: 18 of 55
            Pseudo Genes (internal stop)      :: 20 of 55
            Pseudo Genes (multiple problems)  :: 4 of 55
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2483421
                     /organism="Staphylococcus pasteuri"
                     /mol_type="genomic DNA"
                     /strain="ABV4_149"
                     /isolation_source="Marine"
                     /db_xref="taxon:45972"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWXA010000001-JBSWXA010000042
WGS_SCAFLD  NZ_JBSWXA010000001-NZ_JBSWXA010000042
//
LOCUS       NZ_JARAMC010000000   4942548 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Agona strain
            GS20.35.P.AG, whole genome shotgun sequencing project.
ACCESSION   NZ_JARAMC000000000
VERSION     NZ_JARAMC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN33222203
            Assembly: GCF_036958605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Agona
  ORGANISM  Salmonella enterica subsp. enterica serovar Agona
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4942548)
  AUTHORS   Nguyen,T.Q., Polev,D.E., Saitova,A.T., Makarova,M.A.,
            Matveeva,Z.N., Nguyen,V.H., Tran,P.T., Tran,L.T., Vo,T.K.,
            Nguyen,L.T., Nguyen,T.L., Nguyen,L.T., Egorova,S.A. and
            Kaftyreva,L.A.
  TITLE     Antimicrobial resistance mechanisms of Salmonella isolated in
            people and food items in South Vietnam
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4942548)
  AUTHORS   Nguyen,T.Q., Polev,D.E., Saitova,A.T., Makarova,M.A.,
            Matveeva,Z.N., Nguyen,V.H., Tran,P.T., Tran,L.T., Vo,T.K.,
            Nguyen,L.T., Nguyen,T.L., Nguyen,L.T., Egorova,S.A. and
            Kaftyreva,L.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-FEB-2023) Metagenomics research group,
            Saint-Petersburg Pasteur Institute, Mira, 14, Saint-Petersburg
            197101, Russia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARAMC000000000.1.
            The Salmonella enterica subsp. enterica serovar Agona whole genome
            shotgun (WGS) project has the project accession NZ_JARAMC000000000.
            This version of the project (01) has the accession number
            NZ_JARAMC010000000, and consists of sequences
            JARAMC010000001-JARAMC010000117.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 20-DEC-2022
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 86x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_036958605.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:50:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,948
            CDSs (total)                      :: 4,806
            Genes (coding)                    :: 4,628
            CDSs (with protein)               :: 4,628
            Genes (RNA)                       :: 142
            rRNAs                             :: 9, 17, 20 (5S, 16S, 23S)
            complete rRNAs                    :: 8 (5S)
            partial rRNAs                     :: 1, 17, 20 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 178
            CDSs (without protein)            :: 178
            Pseudo Genes (ambiguous residues) :: 0 of 178
            Pseudo Genes (frameshifted)       :: 60 of 178
            Pseudo Genes (incomplete)         :: 145 of 178
            Pseudo Genes (internal stop)      :: 22 of 178
            Pseudo Genes (multiple problems)  :: 41 of 178
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4942548
                     /organism="Salmonella enterica subsp. enterica serovar
                     Agona"
                     /mol_type="genomic DNA"
                     /strain="GS20.35.P.AG"
                     /serovar="Agona"
                     /isolation_source="patient fecal"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:58095"
                     /geo_loc_name="Viet Nam: An Giang, An Phu Hospital"
                     /lat_lon="10.8159 N 105.0865 E"
                     /collection_date="2021-01-10"
                     /collected_by="Pasteur institute of Ho Chi Minh city, Viet
                     Nam"
WGS         JARAMC010000001-JARAMC010000117
WGS_SCAFLD  NZ_JARAMC010000001-NZ_JARAMC010000117
//
LOCUS       NZ_JBSWXC010000000   2318134 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Staphylococcus hominis strain ABV1_014, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSWXC000000000
VERSION     NZ_JBSWXC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861930
            Assembly: GCF_056160405.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus hominis
  ORGANISM  Staphylococcus hominis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2318134)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWXC000000000.1.
            The Staphylococcus hominis whole genome shotgun (WGS) project has
            the project accession NZ_JBSWXC000000000.  This version of the
            project (01) has the accession number NZ_JBSWXC010000000, and
            consists of sequences JBSWXC010000001-JBSWXC010000068.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 198x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056160405.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:28:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,383
            CDSs (total)                      :: 2,304
            Genes (coding)                    :: 2,239
            CDSs (with protein)               :: 2,239
            Genes (RNA)                       :: 79
            rRNAs                             :: 7, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 4, 3, 2 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 16 of 65
            Pseudo Genes (incomplete)         :: 54 of 65
            Pseudo Genes (internal stop)      :: 12 of 65
            Pseudo Genes (multiple problems)  :: 14 of 65
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2318134
                     /organism="Staphylococcus hominis"
                     /mol_type="genomic DNA"
                     /strain="ABV1_014"
                     /isolation_source="Marine"
                     /db_xref="taxon:1290"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2024-02-16"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWXC010000001-JBSWXC010000068
WGS_SCAFLD  NZ_JBSWXC010000001-NZ_JBSWXC010000068
//
LOCUS       NZ_JBEQHZ010000000   4840314 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Chester strain IFED 7
            MK, whole genome shotgun sequencing project.
ACCESSION   NZ_JBEQHZ000000000
VERSION     NZ_JBEQHZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41784878
            Assembly: GCF_040281615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Chester
  ORGANISM  Salmonella enterica subsp. enterica serovar Chester
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4840314)
  AUTHORS   Sati,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-JUN-2024) BACTERIA RESEARCH, NATIONAL VETERINARY
            RESEARCH INSTITUTE, VOM, VOM 930101, Nigeria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBEQHZ000000000.1.
            The Salmonella enterica subsp. enterica serovar Chester whole
            genome shotgun (WGS) project has the project accession
            NZ_JBEQHZ000000000.  This version of the project (01) has the
            accession number NZ_JBEQHZ010000000, and consists of sequences
            JBEQHZ010000001-JBEQHZ010000073.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 16-MAY-2024
            Assembly Method        :: SPAdes v. 1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_040281615.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:00:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,760
            CDSs (total)                      :: 4,629
            Genes (coding)                    :: 4,458
            CDSs (with protein)               :: 4,458
            Genes (RNA)                       :: 131
            rRNAs                             :: 7, 15, 13 (5S, 16S, 23S)
            complete rRNAs                    :: 6 (5S)
            partial rRNAs                     :: 1, 15, 13 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 15
            Pseudo Genes (total)              :: 171
            CDSs (without protein)            :: 171
            Pseudo Genes (ambiguous residues) :: 0 of 171
            Pseudo Genes (frameshifted)       :: 51 of 171
            Pseudo Genes (incomplete)         :: 149 of 171
            Pseudo Genes (internal stop)      :: 20 of 171
            Pseudo Genes (multiple problems)  :: 40 of 171
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4840314
                     /organism="Salmonella enterica subsp. enterica serovar
                     Chester"
                     /mol_type="genomic DNA"
                     /strain="IFED 7 MK"
                     /serovar="Chester"
                     /isolation_source="feces"
                     /host="duck"
                     /sub_species="enterica"
                     /db_xref="taxon:149386"
                     /geo_loc_name="Nigeria: Share market, Kwara State"
                     /collection_date="2020"
                     /collected_by="NancyMilton Sati"
WGS         JBEQHZ010000001-JBEQHZ010000073
WGS_SCAFLD  NZ_JBEQHZ010000001-NZ_JBEQHZ010000073
//
LOCUS       NZ_AMCS01000000      2406624 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Staphylococcus epidermidis AU12-03, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AMCS00000000
VERSION     NZ_AMCS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN01103171
            Assembly: GCF_000308395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus epidermidis AU12-03
  ORGANISM  Staphylococcus epidermidis AU12-03
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2406624)
  AUTHORS   Zhang,L., Morrison,M., O Cuiv,P., Evans,P. and Rickard,C.M.
  TITLE     Genome sequence of Staphylococcus epidermidis strain AU12-03,
            isolated from an intravascular catheter
  JOURNAL   J Bacteriol 194 (23), 6639 (2012)
   PUBMED   23144393
REFERENCE   2  (bases 1 to 2406624)
  AUTHORS   Zhang,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-AUG-2012) Griffith Health Institute, Griffith
            University, 170 Kessels Road, Nathan, QLD 4111, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AMCS00000000.1.
            The Staphylococcus epidermidis AU12-03 whole genome shotgun (WGS)
            project has the project accession NZ_AMCS00000000.  This version of
            the project (01) has the accession number NZ_AMCS01000000, and
            consists of sequences AMCS01000001-AMCS01000050.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            
            Bacteria and source DNA available from: Li Zhang, Research Centre
            for Clinical and Community Practice Innovation, Griffith
            University, 170 Kessels Road, Nathan QLD 4111, Australia.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: GS De Novo Assembler v. 2.6
            Genome Coverage       :: 25.0x
            Sequencing Technology :: 454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000308395.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:22:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,329
            CDSs (total)                      :: 2,264
            Genes (coding)                    :: 2,175
            CDSs (with protein)               :: 2,175
            Genes (RNA)                       :: 65
            rRNAs                             :: 2, 1 (5S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 89
            CDSs (without protein)            :: 89
            Pseudo Genes (ambiguous residues) :: 0 of 89
            Pseudo Genes (frameshifted)       :: 54 of 89
            Pseudo Genes (incomplete)         :: 44 of 89
            Pseudo Genes (internal stop)      :: 23 of 89
            Pseudo Genes (multiple problems)  :: 25 of 89
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2406624
                     /organism="Staphylococcus epidermidis AU12-03"
                     /mol_type="genomic DNA"
                     /strain="AU12-03"
                     /isolation_source="intravascular catheter"
                     /host="Homo sapiens"
                     /db_xref="taxon:1220510"
                     /geo_loc_name="Australia: Queensland"
WGS         AMCS01000001-AMCS01000050
WGS_SCAFLD  NZ_AMCS01000001-NZ_AMCS01000050
//
LOCUS       NZ_QAUR01000000      5128816 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Bovismorbificans strain
            sg_wd3, whole genome shotgun sequencing project.
ACCESSION   NZ_QAUR00000000
VERSION     NZ_QAUR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08848550
            Assembly: GCF_004291785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Bovismorbificans
  ORGANISM  Salmonella enterica subsp. enterica serovar Bovismorbificans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5128816)
  AUTHORS   Kohli,G.S., Zwe,Y.H., Ding,Y., Givskov,M. and Liang,Y.
  TITLE     Comparative genomic analysis of various Salmonella enterica
            serotypes in Singapore
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5128816)
  AUTHORS   Kohli,G.S., Zwe,Y.H., Ding,Y., Givskov,M. and Liang,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-APR-2018) Cluster 4, SCELSE, Nanyang Technological
            University, Singapore, 60 Nanyang Drive, SBS-01N-27, Singapore,
            Singapore 637551, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QAUR00000000.1.
            The Salmonella enterica subsp. enterica serovar Bovismorbificans
            whole genome shotgun (WGS) project has the project accession
            NZ_QAUR00000000.  This version of the project (01) has the
            accession number NZ_QAUR01000000, and consists of sequences
            QAUR01000001-QAUR01000143.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 173x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004291785.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:04:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,145
            CDSs (total)                      :: 5,009
            Genes (coding)                    :: 4,847
            CDSs (with protein)               :: 4,847
            Genes (RNA)                       :: 136
            rRNAs                             :: 11, 9, 24 (5S, 16S, 23S)
            complete rRNAs                    :: 9 (5S)
            partial rRNAs                     :: 2, 9, 24 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 162
            CDSs (without protein)            :: 162
            Pseudo Genes (ambiguous residues) :: 0 of 162
            Pseudo Genes (frameshifted)       :: 45 of 162
            Pseudo Genes (incomplete)         :: 132 of 162
            Pseudo Genes (internal stop)      :: 18 of 162
            Pseudo Genes (multiple problems)  :: 31 of 162
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5128816
                     /organism="Salmonella enterica subsp. enterica serovar
                     Bovismorbificans"
                     /mol_type="genomic DNA"
                     /strain="sg_wd3"
                     /serovar="Bovismorbificans"
                     /isolation_source="wet market"
                     /sub_species="enterica"
                     /db_xref="taxon:58097"
                     /geo_loc_name="Singapore"
                     /lat_lon="1.3521 N 103.8198 E"
                     /collection_date="2016"
                     /collected_by="Ye Htut Zwe"
WGS         QAUR01000001-QAUR01000143
WGS_SCAFLD  NZ_QAUR01000001-NZ_QAUR01000143
//
LOCUS       NZ_CAIB01000000      2737135 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Staphylococcus intermedius NCTC 11048, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CAIB00000000
VERSION     NZ_CAIB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA2272193
            Assembly: GCF_000308095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus intermedius NCTC 11048
  ORGANISM  Staphylococcus intermedius NCTC 11048
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus; Staphylococcus intermedius
            group.
REFERENCE   1
  AUTHORS   Ben Zakour,N.L., Beatson,S.A., Van den Broek,A.H.M., Thoday,K.L.
            and Fitzgerald,J.R.
  TITLE     Comparative genomics of the Staphylococcus intermedius group of
            animal pathogens
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2737135)
  AUTHORS   BEN ZAKOUR,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-MAR-2012) SCMB, University of Queensland, Bldg 76,
            4072, AUSTRALIA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAIB00000000.1.
            The Staphylococcus intermedius NCTC 11048 whole genome shotgun
            (WGS) project has the project accession NZ_CAIB00000000.  This
            version of the project (01) has the accession number
            NZ_CAIB01000000, and consists of sequences
            CAIB01000001-CAIB01000286.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000308095.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:25:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,763
            CDSs (total)                      :: 2,726
            Genes (coding)                    :: 2,647
            CDSs (with protein)               :: 2,647
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 2 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 30
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 79
            CDSs (without protein)            :: 79
            Pseudo Genes (ambiguous residues) :: 0 of 79
            Pseudo Genes (frameshifted)       :: 17 of 79
            Pseudo Genes (incomplete)         :: 63 of 79
            Pseudo Genes (internal stop)      :: 9 of 79
            Pseudo Genes (multiple problems)  :: 9 of 79
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2737135
                     /organism="Staphylococcus intermedius NCTC 11048"
                     /mol_type="genomic DNA"
                     /strain="NCTC 11048"
                     /type_material="type strain of Staphylococcus intermedius"
                     /db_xref="taxon:1141106"
WGS         CAIB01000001-CAIB01000286
WGS_SCAFLD  NZ_CAIB01000001-NZ_CAIB01000286
//
LOCUS       NZ_JBJLKT010000000   4885480 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S61, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLKT000000000
VERSION     NZ_JBJLKT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026115
            Assembly: GCF_045566295.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4885480)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLKT000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJLKT000000000.  This version of the project
            (01) has the accession number NZ_JBJLKT010000000, and consists of
            sequences JBJLKT010000001-JBJLKT010000068.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Chicken.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045566295.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:21:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,850
            CDSs (total)                      :: 4,754
            Genes (coding)                    :: 4,612
            CDSs (with protein)               :: 4,612
            Genes (RNA)                       :: 96
            rRNAs                             :: 1, 3, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 6 (16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 142
            CDSs (without protein)            :: 142
            Pseudo Genes (ambiguous residues) :: 0 of 142
            Pseudo Genes (frameshifted)       :: 50 of 142
            Pseudo Genes (incomplete)         :: 112 of 142
            Pseudo Genes (internal stop)      :: 20 of 142
            Pseudo Genes (multiple problems)  :: 35 of 142
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4885480
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S61"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Qingdao"
                     /collection_date="2020-05-12"
WGS         JBJLKT010000001-JBJLKT010000068
WGS_SCAFLD  NZ_JBJLKT010000001-NZ_JBJLKT010000068
//
LOCUS       NZ_LFKQ01000000      2113143 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Staphylococcus hominis strain As1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_LFKQ00000000
VERSION     NZ_LFKQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03433700
            Assembly: GCF_001051905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus hominis
  ORGANISM  Staphylococcus hominis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2113143)
  AUTHORS   Hughes,G.L., Raygoza Garay,J.A., Koundal,V., Rasgon,J.L. and
            Mwangi,M.M.
  TITLE     Genome Sequences of Staphylococcus hominis Strains ShAs1, ShAs2,
            and ShAs3, Isolated from the Asian Malaria Mosquito Anopheles
            stephensi
  JOURNAL   Genome Announc 4 (2), e00085-16 (2016)
   PUBMED   26966197
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2113143)
  AUTHORS   Hughes,G.L., Raygoza Garay,J.A., Rasgon,J.L. and Mwangi,M.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JUN-2015) The Department of Biochemistry and
            Molecular Biology, The Department of Entomology, The Pennsylvania
            State Univeristy, Millennium Science Complex, University Park, PA
            16802, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LFKQ00000000.1.
            The Staphylococcus hominis whole genome shotgun (WGS) project has
            the project accession NZ_LFKQ00000000.  This version of the project
            (01) has the accession number NZ_LFKQ01000000, and consists of
            sequences LFKQ01000001-LFKQ01000017.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 2014
            Assembly Method       :: MIRA v. 2014-08-01
            Genome Coverage       :: 100.0x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001051905.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:44:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,139
            CDSs (total)                      :: 2,060
            Genes (coding)                    :: 1,976
            CDSs (with protein)               :: 1,976
            Genes (RNA)                       :: 79
            rRNAs                             :: 6, 6, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 2, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 4 (16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 84
            CDSs (without protein)            :: 84
            Pseudo Genes (ambiguous residues) :: 27 of 84
            Pseudo Genes (frameshifted)       :: 13 of 84
            Pseudo Genes (incomplete)         :: 56 of 84
            Pseudo Genes (internal stop)      :: 6 of 84
            Pseudo Genes (multiple problems)  :: 18 of 84
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2113143
                     /organism="Staphylococcus hominis"
                     /mol_type="genomic DNA"
                     /strain="As1"
                     /isolation_source="whole mosquito body"
                     /host="Anopheles stephensi"
                     /db_xref="taxon:1290"
                     /geo_loc_name="USA: PA, University Park"
                     /collection_date="2013-11-04"
WGS         LFKQ01000001-LFKQ01000017
WGS_SCAFLD  NZ_LFKQ01000001-NZ_LFKQ01000017
//
LOCUS       NZ_JBJLLD010000000   4843654 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S101, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLLD000000000
VERSION     NZ_JBJLLD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026125
            Assembly: GCF_045569735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4843654)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLLD000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJLLD000000000.  This version of the project
            (01) has the accession number NZ_JBJLLD010000000, and consists of
            sequences JBJLLD010000001-JBJLLD010000034.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Chicken.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045569735.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:15:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,802
            CDSs (total)                      :: 4,721
            Genes (coding)                    :: 4,364
            CDSs (with protein)               :: 4,364
            Genes (RNA)                       :: 81
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 357
            CDSs (without protein)            :: 357
            Pseudo Genes (ambiguous residues) :: 0 of 357
            Pseudo Genes (frameshifted)       :: 174 of 357
            Pseudo Genes (incomplete)         :: 130 of 357
            Pseudo Genes (internal stop)      :: 112 of 357
            Pseudo Genes (multiple problems)  :: 51 of 357
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4843654
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S101"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Liaocheng"
                     /collection_date="2021-08-07"
WGS         JBJLLD010000001-JBJLLD010000034
WGS_SCAFLD  NZ_JBJLLD010000001-NZ_JBJLLD010000034
//
LOCUS       NZ_JBJLKZ010000000   4951062 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S85, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLKZ000000000
VERSION     NZ_JBJLKZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026121
            Assembly: GCF_045569675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4951062)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLKZ000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJLKZ000000000.  This version of the project
            (01) has the accession number NZ_JBJLKZ010000000, and consists of
            sequences JBJLKZ010000001-JBJLKZ010000083.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Chicken.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045569675.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:11:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,895
            CDSs (total)                      :: 4,798
            Genes (coding)                    :: 4,652
            CDSs (with protein)               :: 4,652
            Genes (RNA)                       :: 97
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 16
            Pseudo Genes (total)              :: 146
            CDSs (without protein)            :: 146
            Pseudo Genes (ambiguous residues) :: 0 of 146
            Pseudo Genes (frameshifted)       :: 39 of 146
            Pseudo Genes (incomplete)         :: 121 of 146
            Pseudo Genes (internal stop)      :: 18 of 146
            Pseudo Genes (multiple problems)  :: 29 of 146
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4951062
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S85"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Weifang"
                     /collection_date="2021-04-26"
WGS         JBJLKZ010000001-JBJLKZ010000083
WGS_SCAFLD  NZ_JBJLKZ010000001-NZ_JBJLKZ010000083
//
LOCUS       NZ_JBJLLC010000000   4843382 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S100, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLLC000000000
VERSION     NZ_JBJLLC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026124
            Assembly: GCF_045569715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4843382)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLLC000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJLLC000000000.  This version of the project
            (01) has the accession number NZ_JBJLLC010000000, and consists of
            sequences JBJLLC010000001-JBJLLC010000037.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Chicken.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045569715.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:17:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,801
            CDSs (total)                      :: 4,722
            Genes (coding)                    :: 4,363
            CDSs (with protein)               :: 4,363
            Genes (RNA)                       :: 79
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 64
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 359
            CDSs (without protein)            :: 359
            Pseudo Genes (ambiguous residues) :: 0 of 359
            Pseudo Genes (frameshifted)       :: 174 of 359
            Pseudo Genes (incomplete)         :: 132 of 359
            Pseudo Genes (internal stop)      :: 112 of 359
            Pseudo Genes (multiple problems)  :: 51 of 359
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4843382
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S100"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Liaocheng"
                     /collection_date="2021-08-07"
WGS         JBJLLC010000001-JBJLLC010000037
WGS_SCAFLD  NZ_JBJLLC010000001-NZ_JBJLLC010000037
//
LOCUS       NZ_RAVK01000000      4826390 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Stenotrophomonas maltophilia strain PC231, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RAVK00000000
VERSION     NZ_RAVK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10131162
            Assembly: GCF_013464785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
REFERENCE   1  (bases 1 to 4826390)
  AUTHORS   Yero,D., Huedo,P., Conchillo-Sole,O., Martinez-Servat,S., Mamat,U.,
            Coves,X., Llanas,F., Roca,I., Vila,J., Schaible,U.E., Daura,X. and
            Gibert,I.
  TITLE     Genetic Variants of the DSF Quorum Sensing System in
            Stenotrophomonas maltophilia Influence Virulence and Resistance
            Phenotypes Among Genotypically Diverse Clinical Isolates
  JOURNAL   Front Microbiol 11, 1160 (2020)
   PUBMED   32582100
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4826390)
  AUTHORS   Groschel,M., Kohl,T., Conchillo-Sole,O., Mamat,U., Yero,D.,
            Niemann,S., Daura,X. and Gibert,I.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-SEP-2018) IBB, Universitat Autonoma de Barcelona, MRB
            Building, Cerdanyola del Valles, Barcelona 08193, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RAVK00000000.1.
            The Stenotrophomonas maltophilia whole genome shotgun (WGS) project
            has the project accession NZ_RAVK00000000.  This version of the
            project (01) has the accession number NZ_RAVK01000000, and consists
            of sequences RAVK01000001-RAVK01000082.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. Bionumerics 7.6
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013464785.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:36:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,504
            CDSs (total)                      :: 4,434
            Genes (coding)                    :: 4,389
            CDSs (with protein)               :: 4,389
            Genes (RNA)                       :: 70
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 45
            CDSs (without protein)            :: 45
            Pseudo Genes (ambiguous residues) :: 0 of 45
            Pseudo Genes (frameshifted)       :: 11 of 45
            Pseudo Genes (incomplete)         :: 34 of 45
            Pseudo Genes (internal stop)      :: 5 of 45
            Pseudo Genes (multiple problems)  :: 3 of 45
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4826390
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /strain="PC231"
                     /isolation_source="Perineum swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /geo_loc_name="Germany: Berlin"
                     /lat_lon="52.525211 N 13.378660 E"
                     /collection_date="2012"
                     /collected_by="Charite Clinic"
WGS         RAVK01000001-RAVK01000082
WGS_SCAFLD  NZ_RAVK01000001-NZ_RAVK01000082
//
LOCUS       NZ_JAUMTP010000000   4933032 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar 1,4,5,12:i:- strain
            1146, whole genome shotgun sequencing project.
ACCESSION   NZ_JAUMTP000000000
VERSION     NZ_JAUMTP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN36511345
            Assembly: GCF_032923345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar 1,4,5,12:i:-
  ORGANISM  Salmonella enterica subsp. enterica serovar 1,4,5,12:i:-
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4933032)
  AUTHORS   Kaftyreva,L.A., Makarova,M.A., Matveeva,Z.N., Polev,D.E.,
            Saitova,A.T., Zhamborova,M.H., Smirnova,M.V., Meltzer,A.,
            Kondratieva,Z.G. and Dedkov,V.G.
  TITLE     The first findings of monophasic Salmonella Typhimurium in St.
            Petersburg
  JOURNAL   Unpublished
  REMARK    DOI: 10.24412/1999-6780-2023-3-3-9
REFERENCE   2  (bases 1 to 4933032)
  AUTHORS   Polev,D.E., Saitova,A.T., Kaftyreva,L.A., Makarova,M.A.,
            Matveeva,Z.N. and Zhamborova,M.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JUL-2023) Metagenomics Research Group,
            Saint-Petersburg Pasteur Institute, Mira, 14, Saint-Petersburg
            197101, Russia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAUMTP000000000.1.
            The Salmonella enterica subsp. enterica serovar 1,4,5,12:i:- whole
            genome shotgun (WGS) project has the project accession
            NZ_JAUMTP000000000.  This version of the project (01) has the
            accession number NZ_JAUMTP010000000, and consists of sequences
            JAUMTP010000001-JAUMTP010000109.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 290x
            Sequencing Technology  :: DNBSEQ-G50
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_032923345.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:45:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,915
            CDSs (total)                      :: 4,825
            Genes (coding)                    :: 4,675
            CDSs (with protein)               :: 4,675
            Genes (RNA)                       :: 90
            rRNAs                             :: 2, 2, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 7 (5S, 16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 150
            CDSs (without protein)            :: 150
            Pseudo Genes (ambiguous residues) :: 0 of 150
            Pseudo Genes (frameshifted)       :: 34 of 150
            Pseudo Genes (incomplete)         :: 129 of 150
            Pseudo Genes (internal stop)      :: 17 of 150
            Pseudo Genes (multiple problems)  :: 28 of 150
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4933032
                     /organism="Salmonella enterica subsp. enterica serovar
                     1,4,5,12:i:-"
                     /mol_type="genomic DNA"
                     /strain="1146"
                     /serovar="1,4,5,12:i:-"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:2848209"
                     /geo_loc_name="Russia: Saint-Petersburg"
                     /lat_lon="59.93863 N 30.31413 E"
                     /collection_date="2015-10-01"
                     /collected_by="Kaftyreva L.A."
WGS         JAUMTP010000001-JAUMTP010000109
WGS_SCAFLD  NZ_JAUMTP010000001-NZ_JAUMTP010000109
//
LOCUS       NZ_JBJLKW010000000   4729575 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica strain S69, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLKW000000000
VERSION     NZ_JBJLKW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45026118
            Assembly: GCF_045566275.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4729575)
  AUTHORS   Chen,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) College of Agriculture and Biology,
            Liaocheng University, Liaocheng University, Liuyuan Street, Hunan
            Road, Liaocheng City, Shandong Province, China, Liaocheng City,
            Shandong 252000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLKW000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJLKW000000000.  This version of the project
            (01) has the accession number NZ_JBJLKW010000000, and consists of
            sequences JBJLKW010000001-JBJLKW010000032.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Chicken.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045566275.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:25:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,669
            CDSs (total)                      :: 4,574
            Genes (coding)                    :: 4,383
            CDSs (with protein)               :: 4,383
            Genes (RNA)                       :: 95
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 77
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 191
            CDSs (without protein)            :: 191
            Pseudo Genes (ambiguous residues) :: 0 of 191
            Pseudo Genes (frameshifted)       :: 73 of 191
            Pseudo Genes (incomplete)         :: 134 of 191
            Pseudo Genes (internal stop)      :: 32 of 191
            Pseudo Genes (multiple problems)  :: 43 of 191
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4729575
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="S69"
                     /host="chicken"
                     /db_xref="taxon:28901"
                     /geo_loc_name="China: Qingdao"
                     /collection_date="2021-05-18"
WGS         JBJLKW010000001-JBJLKW010000032
WGS_SCAFLD  NZ_JBJLKW010000001-NZ_JBJLKW010000032
//
LOCUS       NZ_JBRKUH010000000   4851651 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Minnesota strain 165
            ST548, whole genome shotgun sequencing project.
ACCESSION   NZ_JBRKUH000000000
VERSION     NZ_JBRKUH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52211342
            Assembly: GCF_056156145.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Minnesota
  ORGANISM  Salmonella enterica subsp. enterica serovar Minnesota
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4851651)
  AUTHORS   Zanon,I.P. and Silva,R.O.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-OCT-2025) Department of Preventive Veterinary
            Medicine, Federal University of Minas Gerais, Avenida Antonio
            Carlos, Belo Horizonte, Minas Gerais 31270901, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRKUH000000000.1.
            The Salmonella enterica subsp. enterica serovar Minnesota whole
            genome shotgun (WGS) project has the project accession
            NZ_JBRKUH000000000.  This version of the project (01) has the
            accession number NZ_JBRKUH010000000, and consists of sequences
            JBRKUH010000001-JBRKUH010000073.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 95.05x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056156145.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:20:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,821
            CDSs (total)                      :: 4,729
            Genes (coding)                    :: 4,564
            CDSs (with protein)               :: 4,564
            Genes (RNA)                       :: 92
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 76
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 165
            CDSs (without protein)            :: 165
            Pseudo Genes (ambiguous residues) :: 0 of 165
            Pseudo Genes (frameshifted)       :: 65 of 165
            Pseudo Genes (incomplete)         :: 123 of 165
            Pseudo Genes (internal stop)      :: 23 of 165
            Pseudo Genes (multiple problems)  :: 42 of 165
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4851651
                     /organism="Salmonella enterica subsp. enterica serovar
                     Minnesota"
                     /mol_type="genomic DNA"
                     /strain="165 ST548"
                     /serovar="Minnesota"
                     /isolation_source="Carcasses"
                     /host="Gallus gallus domesticus"
                     /sub_species="enterica"
                     /db_xref="taxon:70803"
                     /geo_loc_name="Brazil: Minas Gerais"
                     /collection_date="2024"
                     /collected_by="LAEV - UFMG"
WGS         JBRKUH010000001-JBRKUH010000073
WGS_SCAFLD  NZ_JBRKUH010000001-NZ_JBRKUH010000073
//
LOCUS       NZ_JBRKUJ010000000   4818284 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Minnesota strain 44
            ST548, whole genome shotgun sequencing project.
ACCESSION   NZ_JBRKUJ000000000
VERSION     NZ_JBRKUJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52211340
            Assembly: GCF_056156185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Minnesota
  ORGANISM  Salmonella enterica subsp. enterica serovar Minnesota
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4818284)
  AUTHORS   Zanon,I.P. and Silva,R.O.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-OCT-2025) Department of Preventive Veterinary
            Medicine, Federal University of Minas Gerais, Avenida Antonio
            Carlos, Belo Horizonte, Minas Gerais 31270901, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRKUJ000000000.1.
            The Salmonella enterica subsp. enterica serovar Minnesota whole
            genome shotgun (WGS) project has the project accession
            NZ_JBRKUJ000000000.  This version of the project (01) has the
            accession number NZ_JBRKUJ010000000, and consists of sequences
            JBRKUJ010000001-JBRKUJ010000071.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 106239x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056156185.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:30:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,777
            CDSs (total)                      :: 4,683
            Genes (coding)                    :: 4,520
            CDSs (with protein)               :: 4,520
            Genes (RNA)                       :: 94
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 78
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 163
            CDSs (without protein)            :: 163
            Pseudo Genes (ambiguous residues) :: 0 of 163
            Pseudo Genes (frameshifted)       :: 66 of 163
            Pseudo Genes (incomplete)         :: 121 of 163
            Pseudo Genes (internal stop)      :: 22 of 163
            Pseudo Genes (multiple problems)  :: 42 of 163
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4818284
                     /organism="Salmonella enterica subsp. enterica serovar
                     Minnesota"
                     /mol_type="genomic DNA"
                     /strain="44 ST548"
                     /serovar="Minnesota"
                     /isolation_source="Carcasses"
                     /host="Gallus gallus domesticus"
                     /sub_species="enterica"
                     /db_xref="taxon:70803"
                     /geo_loc_name="Brazil: Minas Gerais"
                     /collection_date="2024"
                     /collected_by="LAEV - UFMG"
WGS         JBRKUJ010000001-JBRKUJ010000071
WGS_SCAFLD  NZ_JBRKUJ010000001-NZ_JBRKUJ010000071
//
LOCUS       NZ_JBRKUI010000000   4857296 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Minnesota strain 59
            ST548, whole genome shotgun sequencing project.
ACCESSION   NZ_JBRKUI000000000
VERSION     NZ_JBRKUI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52211341
            Assembly: GCF_056156165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Minnesota
  ORGANISM  Salmonella enterica subsp. enterica serovar Minnesota
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4857296)
  AUTHORS   Zanon,I.P. and Silva,R.O.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-OCT-2025) Department of Preventive Veterinary
            Medicine, Federal University of Minas Gerais, Avenida Antonio
            Carlos, Belo Horizonte, Minas Gerais 31270901, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRKUI000000000.1.
            The Salmonella enterica subsp. enterica serovar Minnesota whole
            genome shotgun (WGS) project has the project accession
            NZ_JBRKUI000000000.  This version of the project (01) has the
            accession number NZ_JBRKUI010000000, and consists of sequences
            JBRKUI010000001-JBRKUI010000072.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 86.82x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056156165.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:21:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,834
            CDSs (total)                      :: 4,740
            Genes (coding)                    :: 4,575
            CDSs (with protein)               :: 4,575
            Genes (RNA)                       :: 94
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 77
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 165
            CDSs (without protein)            :: 165
            Pseudo Genes (ambiguous residues) :: 0 of 165
            Pseudo Genes (frameshifted)       :: 66 of 165
            Pseudo Genes (incomplete)         :: 123 of 165
            Pseudo Genes (internal stop)      :: 22 of 165
            Pseudo Genes (multiple problems)  :: 42 of 165
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4857296
                     /organism="Salmonella enterica subsp. enterica serovar
                     Minnesota"
                     /mol_type="genomic DNA"
                     /strain="59 ST548"
                     /serovar="Minnesota"
                     /isolation_source="Carcasses"
                     /host="Gallus gallus domesticus"
                     /sub_species="enterica"
                     /db_xref="taxon:70803"
                     /geo_loc_name="Brazil: Minas Gerais"
                     /collection_date="2024"
                     /collected_by="LAEV - UFMG"
WGS         JBRKUI010000001-JBRKUI010000072
WGS_SCAFLD  NZ_JBRKUI010000001-NZ_JBRKUI010000072
//
LOCUS       NZ_JBRKUG010000000   4855797 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Minnesota strain 618
            ST548, whole genome shotgun sequencing project.
ACCESSION   NZ_JBRKUG000000000
VERSION     NZ_JBRKUG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52211343
            Assembly: GCF_056156125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Minnesota
  ORGANISM  Salmonella enterica subsp. enterica serovar Minnesota
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4855797)
  AUTHORS   Zanon,I.P. and Silva,R.O.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-OCT-2025) Department of Preventive Veterinary
            Medicine, Federal University of Minas Gerais, Avenida Antonio
            Carlos, Belo Horizonte, Minas Gerais 31270901, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBRKUG000000000.1.
            The Salmonella enterica subsp. enterica serovar Minnesota whole
            genome shotgun (WGS) project has the project accession
            NZ_JBRKUG000000000.  This version of the project (01) has the
            accession number NZ_JBRKUG010000000, and consists of sequences
            JBRKUG010000001-JBRKUG010000066.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 104.25x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056156125.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:21:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,827
            CDSs (total)                      :: 4,733
            Genes (coding)                    :: 4,567
            CDSs (with protein)               :: 4,567
            Genes (RNA)                       :: 94
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 77
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 65 of 166
            Pseudo Genes (incomplete)         :: 125 of 166
            Pseudo Genes (internal stop)      :: 22 of 166
            Pseudo Genes (multiple problems)  :: 42 of 166
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4855797
                     /organism="Salmonella enterica subsp. enterica serovar
                     Minnesota"
                     /mol_type="genomic DNA"
                     /strain="618 ST548"
                     /serovar="Minnesota"
                     /isolation_source="Carcasses"
                     /host="Gallus gallus domesticus"
                     /sub_species="enterica"
                     /db_xref="taxon:70803"
                     /geo_loc_name="Brazil: Minas Gerais"
                     /collection_date="2024"
                     /collected_by="LAEV - UFMG"
WGS         JBRKUG010000001-JBRKUG010000066
WGS_SCAFLD  NZ_JBRKUG010000001-NZ_JBRKUG010000066
//
LOCUS       NZ_JAVFWP010000000   2656684 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Staphylococcus capitis subsp. urealyticus strain H2, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JAVFWP000000000
VERSION     NZ_JAVFWP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37101270
            Assembly: GCF_056154065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus capitis subsp. urealyticus
  ORGANISM  Staphylococcus capitis subsp. urealyticus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2656684)
  AUTHORS   Olivella,J.G.B., Sant'Anna,L.O., Santos,L.S., Botelho,M.A.,
            Pereira-Ribeiro,P.M.A. and Mattos-Guaraldi,A.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-AUG-2023) Department of Microbiology, Immunology and
            Parasitology, State University of Rio de Janeiro, Avenida 28 de
            Setembro 87 Fundos, Rio de Janeiro, Rio de Janeiro 20551-030,
            Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAVFWP000000000.1.
            The Staphylococcus capitis subsp. urealyticus whole genome shotgun
            (WGS) project has the project accession NZ_JAVFWP000000000.  This
            version of the project (01) has the accession number
            NZ_JAVFWP010000000, and consists of sequences
            JAVFWP010000001-JAVFWP010000039.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: APR-2023
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 40.0x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154065.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:49:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,636
            CDSs (total)                      :: 2,568
            Genes (coding)                    :: 2,508
            CDSs (with protein)               :: 2,508
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 60
            CDSs (without protein)            :: 60
            Pseudo Genes (ambiguous residues) :: 0 of 60
            Pseudo Genes (frameshifted)       :: 23 of 60
            Pseudo Genes (incomplete)         :: 38 of 60
            Pseudo Genes (internal stop)      :: 12 of 60
            Pseudo Genes (multiple problems)  :: 13 of 60
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2656684
                     /organism="Staphylococcus capitis subsp. urealyticus"
                     /mol_type="genomic DNA"
                     /strain="H2"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /sub_species="urealyticus"
                     /db_xref="taxon:74703"
                     /geo_loc_name="Brazil"
                     /lat_lon="22.9147 S 43.2371 W"
                     /collection_date="2014"
                     /collected_by="Rio de Janeiro State University"
WGS         JAVFWP010000001-JAVFWP010000039
WGS_SCAFLD  NZ_JAVFWP010000001-NZ_JAVFWP010000039
//
LOCUS       NZ_LYVJ01000000      4123397 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Stenotrophomonas maltophilia strain Sm46PAILV, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LYVJ00000000
VERSION     NZ_LYVJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05188928
            Assembly: GCF_001676385.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
REFERENCE   1  (bases 1 to 4123397)
  AUTHORS   Nazaret,S. and Bodilis,J.
  TITLE     Draft Genome Sequences of Stenotrophomonas maltophilia Strains
            Sm32COP, Sm41DVV, Sm46PAILV, SmF3, SmF22, SmSOFb1 and SmCVFa1,
            Isolated from Different Manures, in France
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4123397)
  AUTHORS   Nazaret,S. and Bodilis,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-MAY-2016) Biology Department, UMR5557, University of
            Lyon, 16 rue Dubois, Villeurbanne 69622, France
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LYVJ00000000.1.
            The Stenotrophomonas maltophilia whole genome shotgun (WGS) project
            has the project accession NZ_LYVJ00000000.  This version of the
            project (01) has the accession number NZ_LYVJ01000000, and consists
            of sequences LYVJ01000001-LYVJ01000051.
            Bacteria and/or source DNA is available from UMR5557, University of
            Lyon.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 15-MAY-2016
            Assembly Method       :: SPAdes, Celera, Minia, VelvetOptimiser,
                                     Masurca v. 2016-05-15
            Genome Coverage       :: 201.0x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001676385.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:01:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,851
            CDSs (total)                      :: 3,759
            Genes (coding)                    :: 3,655
            CDSs (with protein)               :: 3,655
            Genes (RNA)                       :: 92
            rRNAs                             :: 9, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 104
            CDSs (without protein)            :: 104
            Pseudo Genes (ambiguous residues) :: 0 of 104
            Pseudo Genes (frameshifted)       :: 63 of 104
            Pseudo Genes (incomplete)         :: 47 of 104
            Pseudo Genes (internal stop)      :: 5 of 104
            Pseudo Genes (multiple problems)  :: 10 of 104
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4123397
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /strain="Sm46PAILV"
                     /isolation_source="horse manure"
                     /db_xref="taxon:40324"
                     /geo_loc_name="France: Feucherolles"
                     /collection_date="2010-10-14"
WGS         LYVJ01000001-LYVJ01000051
WGS_SCAFLD  NZ_LYVJ01000001-NZ_LYVJ01000051
//
LOCUS       NZ_JBSVZC010000000   4397917 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Sphingopyxis granuli strain XYQ201, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSVZC000000000
VERSION     NZ_JBSVZC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52861644
            Assembly: GCF_056156485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sphingopyxis granuli
  ORGANISM  Sphingopyxis granuli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingopyxidaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 4397917)
  AUTHORS   Qi,X.
  TITLE     Incomplete detoxification of bisphenol A by a newly identified
            degradation pathway in Sphingopyxis granuli XYQ201 reveals
            potential environmental risks
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4397917)
  AUTHORS   Qi,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-OCT-2025) Jinhua Academy, Zhejiang Chinese Medical
            University, Jindong, Jinhua, Zhejiang 321000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSVZC000000000.1.
            The Sphingopyxis granuli whole genome shotgun (WGS) project has the
            project accession NZ_JBSVZC000000000.  This version of the project
            (01) has the accession number NZ_JBSVZC010000000, and consists of
            sequences JBSVZC010000001-JBSVZC010000003.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-AUG-2025
            Assembly Method        :: Flye v. v2.9.1-b1781; Unicycler v. v0.5.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30.0x
            Sequencing Technology  :: Illumina NovaSeq; PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056156485.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:44:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,171
            CDSs (total)                      :: 4,118
            Genes (coding)                    :: 4,045
            CDSs (with protein)               :: 4,045
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 73
            CDSs (without protein)            :: 73
            Pseudo Genes (ambiguous residues) :: 0 of 73
            Pseudo Genes (frameshifted)       :: 28 of 73
            Pseudo Genes (incomplete)         :: 55 of 73
            Pseudo Genes (internal stop)      :: 4 of 73
            Pseudo Genes (multiple problems)  :: 12 of 73
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4397917
                     /organism="Sphingopyxis granuli"
                     /mol_type="genomic DNA"
                     /strain="XYQ201"
                     /isolation_source="wastewater"
                     /db_xref="taxon:267128"
                     /geo_loc_name="China: Hangzhou"
                     /collection_date="2024-08-15"
WGS         JBSVZC010000001-JBSVZC010000003
WGS_SCAFLD  NZ_CM149593
WGS_SCAFLD  NZ_JBSVZC010000002-NZ_JBSVZC010000003
//
LOCUS       NZ_RAUB01000000      4639595 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Stenotrophomonas maltophilia strain PC313, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RAUB00000000
VERSION     NZ_RAUB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10131052
            Assembly: GCF_013464065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
REFERENCE   1  (bases 1 to 4639595)
  AUTHORS   Yero,D., Huedo,P., Conchillo-Sole,O., Martinez-Servat,S., Mamat,U.,
            Coves,X., Llanas,F., Roca,I., Vila,J., Schaible,U.E., Daura,X. and
            Gibert,I.
  TITLE     Genetic Variants of the DSF Quorum Sensing System in
            Stenotrophomonas maltophilia Influence Virulence and Resistance
            Phenotypes Among Genotypically Diverse Clinical Isolates
  JOURNAL   Front Microbiol 11, 1160 (2020)
   PUBMED   32582100
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4639595)
  AUTHORS   Groschel,M., Kohl,T., Conchillo-Sole,O., Mamat,U., Yero,D.,
            Niemann,S., Daura,X. and Gibert,I.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-SEP-2018) IBB, Universitat Autonoma de Barcelona, MRB
            Building, Cerdanyola del Valles, Barcelona 08193, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RAUB00000000.1.
            The Stenotrophomonas maltophilia whole genome shotgun (WGS) project
            has the project accession NZ_RAUB00000000.  This version of the
            project (01) has the accession number NZ_RAUB01000000, and consists
            of sequences RAUB01000001-RAUB01000133.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. Bionumerics 7.6
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013464065.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:29:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,240
            CDSs (total)                      :: 4,168
            Genes (coding)                    :: 4,141
            CDSs (with protein)               :: 4,141
            Genes (RNA)                       :: 72
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 65
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 27
            CDSs (without protein)            :: 27
            Pseudo Genes (ambiguous residues) :: 0 of 27
            Pseudo Genes (frameshifted)       :: 5 of 27
            Pseudo Genes (incomplete)         :: 24 of 27
            Pseudo Genes (internal stop)      :: 0 of 27
            Pseudo Genes (multiple problems)  :: 2 of 27
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4639595
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /strain="PC313"
                     /isolation_source="Perineum swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /geo_loc_name="Germany: Berlin"
                     /lat_lon="52.525211 N 13.378660 E"
                     /collection_date="2012"
                     /collected_by="Charite Clinic"
WGS         RAUB01000001-RAUB01000133
WGS_SCAFLD  NZ_RAUB01000001-NZ_RAUB01000133
//
LOCUS       NZ_JBUEBZ010000000   5022230 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Dublin strain
            SAL-24-531163, whole genome shotgun sequencing project.
ACCESSION   NZ_JBUEBZ000000000
VERSION     NZ_JBUEBZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54991749
            Assembly: GCF_056163535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Dublin
  ORGANISM  Salmonella enterica subsp. enterica serovar Dublin
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5022230)
  AUTHORS   Dezoysa,A.R., Edison,L.K., Kariyawasam,S., Bommineni,Y.R., Glick,L.
            and Denagamage,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JAN-2026) Department of Comparative, Diagnostic and
            Population Medicine, University of Florida, 1600 SW Archer Road,
            Gainesville, FL 32610, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBUEBZ000000000.1.
            The Salmonella enterica subsp. enterica serovar Dublin whole genome
            shotgun (WGS) project has the project accession NZ_JBUEBZ000000000.
            This version of the project (01) has the accession number
            NZ_JBUEBZ010000000, and consists of sequences
            JBUEBZ010000001-JBUEBZ010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 25.0.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1.0x
            Sequencing Technology  :: Illumina MiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056163535.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 05:01:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,994
            CDSs (total)                      :: 4,874
            Genes (coding)                    :: 4,622
            CDSs (with protein)               :: 4,622
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 17
            Pseudo Genes (total)              :: 252
            CDSs (without protein)            :: 252
            Pseudo Genes (ambiguous residues) :: 0 of 252
            Pseudo Genes (frameshifted)       :: 120 of 252
            Pseudo Genes (incomplete)         :: 128 of 252
            Pseudo Genes (internal stop)      :: 58 of 252
            Pseudo Genes (multiple problems)  :: 49 of 252
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5022230
                     /organism="Salmonella enterica subsp. enterica serovar
                     Dublin"
                     /mol_type="genomic DNA"
                     /strain="SAL-24-531163"
                     /serovar="Dublin"
                     /host="Bos taurus"
                     /sub_species="enterica"
                     /db_xref="taxon:98360"
                     /geo_loc_name="USA: Florida"
                     /collected_by="Clinical Microbiology, Parasitology, and
                     Serology Laboratory at the College of Veterinary Medicine
                     (CVM), University of Florida (UF)"
WGS         JBUEBZ010000001-JBUEBZ010000002
WGS_SCAFLD  NZ_CM149645
WGS_SCAFLD  NZ_JBUEBZ010000002
//
LOCUS       NZ_ALEO01000000      4694091 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Enteritidis str.
            596866-22, whole genome shotgun sequencing project.
ACCESSION   NZ_ALEO00000000
VERSION     NZ_ALEO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN01041105
            Assembly: GCF_000280195.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Enteritidis str.
            596866-22
  ORGANISM  Salmonella enterica subsp. enterica serovar Enteritidis str.
            596866-22
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4694091)
  AUTHORS   Timme,R.E., Allard,M.W., Luo,Y., Strain,E., Pettengill,J., Wang,C.,
            Li,C., Keys,C.E., Zheng,J., Stones,R., Wilson,M.R., Musser,S.M. and
            Brown,E.W.
  TITLE     Draft genome sequences of 21 Salmonella enterica serovar
            enteritidis strains
  JOURNAL   J Bacteriol 194 (21), 5994-5995 (2012)
   PUBMED   23045502
REFERENCE   2  (bases 1 to 4694091)
  AUTHORS   Strain,E.A., Brown,E., Allard,M.W., Luo,Y. and Timme,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAY-2012) Center for Food Safety and Applied
            Nutrition, United States Food and Drug Administration, 5100 Paint
            Branch Parkway, College Park, MD 20740, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ALEO00000000.1.
            The Salmonella enterica subsp. enterica serovar Enteritidis str.
            596866-22 whole genome shotgun (WGS) project has the project
            accession NZ_ALEO00000000.  This version of the project (01) has
            the accession number NZ_ALEO01000000, and consists of sequences
            ALEO01000001-ALEO01000038.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            
            Bacterial culture available from Dwayne Roberson, FDA College Park
            Campus, 5100 Paint Branch Parkway, College Park, MD 20740.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Newbler v. 2.6
            Genome Coverage       :: 29.9x
            Sequencing Technology :: 454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000280195.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:35:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,611
            CDSs (total)                      :: 4,525
            Genes (coding)                    :: 4,329
            CDSs (with protein)               :: 4,329
            Genes (RNA)                       :: 86
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2, 2 (5S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 196
            CDSs (without protein)            :: 196
            Pseudo Genes (ambiguous residues) :: 0 of 196
            Pseudo Genes (frameshifted)       :: 87 of 196
            Pseudo Genes (incomplete)         :: 133 of 196
            Pseudo Genes (internal stop)      :: 29 of 196
            Pseudo Genes (multiple problems)  :: 46 of 196
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4694091
                     /organism="Salmonella enterica subsp. enterica serovar
                     Enteritidis str. 596866-22"
                     /mol_type="genomic DNA"
                     /strain="596866-22"
                     /serovar="Enteritidis"
                     /isolation_source="environmental swab"
                     /sub_species="enterica"
                     /db_xref="taxon:910414"
                     /geo_loc_name="USA:IA"
                     /collection_date="2010-08-31"
                     /collected_by="FDA"
WGS         ALEO01000001-ALEO01000038
WGS_SCAFLD  NZ_ALEO01000001-NZ_ALEO01000038
//
LOCUS       NZ_ALES01000000      4690226 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Enteritidis str.
            639672-46, whole genome shotgun sequencing project.
ACCESSION   NZ_ALES00000000
VERSION     NZ_ALES00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN01041121
            Assembly: GCF_000280275.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Enteritidis str.
            639672-46
  ORGANISM  Salmonella enterica subsp. enterica serovar Enteritidis str.
            639672-46
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4690226)
  AUTHORS   Timme,R.E., Allard,M.W., Luo,Y., Strain,E., Pettengill,J., Wang,C.,
            Li,C., Keys,C.E., Zheng,J., Stones,R., Wilson,M.R., Musser,S.M. and
            Brown,E.W.
  TITLE     Draft genome sequences of 21 Salmonella enterica serovar
            enteritidis strains
  JOURNAL   J Bacteriol 194 (21), 5994-5995 (2012)
   PUBMED   23045502
REFERENCE   2  (bases 1 to 4690226)
  AUTHORS   Strain,E.A., Brown,E., Allard,M.W., Luo,Y. and Timme,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAY-2012) Center for Food Safety and Applied
            Nutrition, United States Food and Drug Administration, 5100 Paint
            Branch Parkway, College Park, MD 20740, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ALES00000000.1.
            The Salmonella enterica subsp. enterica serovar Enteritidis str.
            639672-46 whole genome shotgun (WGS) project has the project
            accession NZ_ALES00000000.  This version of the project (01) has
            the accession number NZ_ALES01000000, and consists of sequences
            ALES01000001-ALES01000050.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            
            Bacterial culture available from Dwayne Roberson, FDA College Park
            Campus, 5100 Paint Branch Parkway, College Park, MD 20740.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Newbler v. 2.6
            Genome Coverage       :: 22.8x
            Sequencing Technology :: 454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000280275.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:31:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,605
            CDSs (total)                      :: 4,527
            Genes (coding)                    :: 4,321
            CDSs (with protein)               :: 4,321
            Genes (RNA)                       :: 78
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2, 2 (5S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 206
            CDSs (without protein)            :: 206
            Pseudo Genes (ambiguous residues) :: 0 of 206
            Pseudo Genes (frameshifted)       :: 93 of 206
            Pseudo Genes (incomplete)         :: 135 of 206
            Pseudo Genes (internal stop)      :: 31 of 206
            Pseudo Genes (multiple problems)  :: 46 of 206
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4690226
                     /organism="Salmonella enterica subsp. enterica serovar
                     Enteritidis str. 639672-46"
                     /mol_type="genomic DNA"
                     /strain="639672-46"
                     /serovar="Enteritidis"
                     /isolation_source="environmental swab"
                     /sub_species="enterica"
                     /db_xref="taxon:910418"
                     /geo_loc_name="USA:IA"
                     /collection_date="2010-08-31"
                     /collected_by="FDA"
WGS         ALES01000001-ALES01000050
WGS_SCAFLD  NZ_ALES01000001-NZ_ALES01000050
//
LOCUS       NZ_JBLZXE010000000   5127985 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Sphingobium sp. RS1, whole genome shotgun sequencing project.
ACCESSION   NZ_JBLZXE000000000
VERSION     NZ_JBLZXE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN46889339
            Assembly: GCF_056156825.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sphingobium sp. RS1
  ORGANISM  Sphingobium sp. RS1
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingobiaceae; Sphingobium.
REFERENCE   1  (bases 1 to 5127985)
  AUTHORS   Abedini,D., Jain,R., Dong,L. and Bouwmeester,H.
  TITLE     Genome sequence of bacteria actively recruited in rhizosphere of
            tomato under N-starvation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5127985)
  AUTHORS   Abedini,D., Jain,R., Dong,L. and Bouwmeester,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-MAR-2025) Plant Hormone Biology, Faculty of Sciences,
            University of Amsterdam, Science Park 904, Amsterdam, Noord Holland
            1098XH, Netherlands
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBLZXE000000000.1.
            The Sphingobium sp. RS1 whole genome shotgun (WGS) project has the
            project accession NZ_JBLZXE000000000.  This version of the project
            (01) has the accession number NZ_JBLZXE010000000, and consists of
            sequences JBLZXE010000001-JBLZXE010000005.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Plant Hormone Biology,
            University of Amsterdam.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: AUG-2024
            Assembly Method        :: Flye v. 2.9.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 76.0x
            Sequencing Technology  :: Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056156825.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:38:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,964
            CDSs (total)                      :: 4,888
            Genes (coding)                    :: 4,820
            CDSs (with protein)               :: 4,820
            Genes (RNA)                       :: 76
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 24 of 68
            Pseudo Genes (incomplete)         :: 49 of 68
            Pseudo Genes (internal stop)      :: 8 of 68
            Pseudo Genes (multiple problems)  :: 12 of 68
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5127985
                     /organism="Sphingobium sp. RS1"
                     /mol_type="genomic DNA"
                     /strain="RS1"
                     /isolation_source="rhizosphere soil"
                     /host="Solanum lycopersicum"
                     /db_xref="taxon:1707149"
                     /geo_loc_name="Netherlands: Amsterdam"
                     /lat_lon="52.35440574 N 4.95570953 E"
                     /collection_date="2024-01"
WGS         JBLZXE010000001-JBLZXE010000005
WGS_SCAFLD  NZ_JBLZXE010000001-NZ_JBLZXE010000005
//
LOCUS       NZ_JAOCMC010000000   4605365 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Stenotrophomonas sp. GSD10, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAOCMC000000000
VERSION     NZ_JAOCMC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN30801787
            Assembly: GCF_056172695.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas sp. GSD10
  ORGANISM  Stenotrophomonas sp. GSD10
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas.
REFERENCE   1  (bases 1 to 4605365)
  AUTHORS   Nakbanpote,W., Sangdee,A. and Munjit,R.
  TITLE     Whole genome sequence of Stenotrophomonas GSD10
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4605365)
  AUTHORS   Nakbanpote,W., Sangdee,A. and Munjit,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-SEP-2022) Biology, Mahasarakham University, Faculty
            of Science, Mahasarakham University, Kantarawichai, MahaSarakham
            44150, Thailand
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAOCMC000000000.1.
            The Stenotrophomonas sp. GSD10 whole genome shotgun (WGS) project
            has the project accession NZ_JAOCMC000000000.  This version of the
            project (01) has the accession number NZ_JAOCMC010000000, and
            consists of sequences JAOCMC010000001-JAOCMC010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Department of Biology,
            Faculty of Science, Mahasarakham University.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 09-SEP-2022
            Assembly Method        :: flye v. v2.8.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 260.0x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172695.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:09:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,257
            CDSs (total)                      :: 4,166
            Genes (coding)                    :: 3,739
            CDSs (with protein)               :: 3,739
            Genes (RNA)                       :: 91
            rRNAs                             :: 5, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 427
            CDSs (without protein)            :: 427
            Pseudo Genes (ambiguous residues) :: 0 of 427
            Pseudo Genes (frameshifted)       :: 384 of 427
            Pseudo Genes (incomplete)         :: 47 of 427
            Pseudo Genes (internal stop)      :: 2 of 427
            Pseudo Genes (multiple problems)  :: 6 of 427
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4605365
                     /organism="Stenotrophomonas sp. GSD10"
                     /mol_type="genomic DNA"
                     /strain="GSD10"
                     /host="Gynura pseudochina L.DC."
                     /db_xref="taxon:2978126"
                     /geo_loc_name="Thailand: Tak"
                     /collection_date="2019-09-16"
WGS         JAOCMC010000001-JAOCMC010000002
WGS_SCAFLD  NZ_JAOCMC010000001-NZ_JAOCMC010000002
//
LOCUS       NZ_RAVL01000000      4826267 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Stenotrophomonas maltophilia strain PC230, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RAVL00000000
VERSION     NZ_RAVL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10131161
            Assembly: GCF_013464775.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
REFERENCE   1  (bases 1 to 4826267)
  AUTHORS   Yero,D., Huedo,P., Conchillo-Sole,O., Martinez-Servat,S., Mamat,U.,
            Coves,X., Llanas,F., Roca,I., Vila,J., Schaible,U.E., Daura,X. and
            Gibert,I.
  TITLE     Genetic Variants of the DSF Quorum Sensing System in
            Stenotrophomonas maltophilia Influence Virulence and Resistance
            Phenotypes Among Genotypically Diverse Clinical Isolates
  JOURNAL   Front Microbiol 11, 1160 (2020)
   PUBMED   32582100
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4826267)
  AUTHORS   Groschel,M., Kohl,T., Conchillo-Sole,O., Mamat,U., Yero,D.,
            Niemann,S., Daura,X. and Gibert,I.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-SEP-2018) IBB, Universitat Autonoma de Barcelona, MRB
            Building, Cerdanyola del Valles, Barcelona 08193, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RAVL00000000.1.
            The Stenotrophomonas maltophilia whole genome shotgun (WGS) project
            has the project accession NZ_RAVL00000000.  This version of the
            project (01) has the accession number NZ_RAVL01000000, and consists
            of sequences RAVL01000001-RAVL01000086.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. Bionumerics 7.6
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013464775.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:37:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,506
            CDSs (total)                      :: 4,436
            Genes (coding)                    :: 4,393
            CDSs (with protein)               :: 4,393
            Genes (RNA)                       :: 70
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 11 of 43
            Pseudo Genes (incomplete)         :: 32 of 43
            Pseudo Genes (internal stop)      :: 5 of 43
            Pseudo Genes (multiple problems)  :: 3 of 43
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4826267
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /strain="PC230"
                     /isolation_source="Perineum swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /geo_loc_name="Germany: Berlin"
                     /lat_lon="52.525211 N 13.378660 E"
                     /collection_date="2012"
                     /collected_by="Charite Clinic"
WGS         RAVL01000001-RAVL01000086
WGS_SCAFLD  NZ_RAVL01000001-NZ_RAVL01000086
//
LOCUS       NZ_RAVT01000000      4646463 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Stenotrophomonas maltophilia strain PC315, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RAVT00000000
VERSION     NZ_RAVT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10131153
            Assembly: GCF_013464915.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
REFERENCE   1  (bases 1 to 4646463)
  AUTHORS   Yero,D., Huedo,P., Conchillo-Sole,O., Martinez-Servat,S., Mamat,U.,
            Coves,X., Llanas,F., Roca,I., Vila,J., Schaible,U.E., Daura,X. and
            Gibert,I.
  TITLE     Genetic Variants of the DSF Quorum Sensing System in
            Stenotrophomonas maltophilia Influence Virulence and Resistance
            Phenotypes Among Genotypically Diverse Clinical Isolates
  JOURNAL   Front Microbiol 11, 1160 (2020)
   PUBMED   32582100
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4646463)
  AUTHORS   Groschel,M., Kohl,T., Conchillo-Sole,O., Mamat,U., Yero,D.,
            Niemann,S., Daura,X. and Gibert,I.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-SEP-2018) IBB, Universitat Autonoma de Barcelona, MRB
            Building, Cerdanyola del Valles, Barcelona 08193, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RAVT00000000.1.
            The Stenotrophomonas maltophilia whole genome shotgun (WGS) project
            has the project accession NZ_RAVT00000000.  This version of the
            project (01) has the accession number NZ_RAVT01000000, and consists
            of sequences RAVT01000001-RAVT01000114.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. Bionumerics 7.6
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013464915.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:33:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,244
            CDSs (total)                      :: 4,170
            Genes (coding)                    :: 4,138
            CDSs (with protein)               :: 4,138
            Genes (RNA)                       :: 74
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 32
            CDSs (without protein)            :: 32
            Pseudo Genes (ambiguous residues) :: 0 of 32
            Pseudo Genes (frameshifted)       :: 5 of 32
            Pseudo Genes (incomplete)         :: 29 of 32
            Pseudo Genes (internal stop)      :: 0 of 32
            Pseudo Genes (multiple problems)  :: 2 of 32
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4646463
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /strain="PC315"
                     /isolation_source="Perineum swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /geo_loc_name="Germany: Berlin"
                     /lat_lon="52.525211 N 13.378660 E"
                     /collection_date="2012"
                     /collected_by="Charite Clinic"
WGS         RAVT01000001-RAVT01000114
WGS_SCAFLD  NZ_RAVT01000001-NZ_RAVT01000114
//
LOCUS       NZ_JAVTUQ010000000   4623418 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Paratyphi A strain
            ICDC-S.pA3109, whole genome shotgun sequencing project.
ACCESSION   NZ_JAVTUQ000000000
VERSION     NZ_JAVTUQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37487045
            Assembly: GCF_039991615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Paratyphi A (Salmonella
            paratyphi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Paratyphi A
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4623418)
  AUTHORS   Kan,B.
  TITLE     Bacillus paratyphi A prevelence in China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4623418)
  AUTHORS   Kan,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) Diarrhea, Chinese Center for Disease
            Control and Prevention, Changbai Road, Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAVTUQ000000000.1.
            The Salmonella enterica subsp. enterica serovar Paratyphi A whole
            genome shotgun (WGS) project has the project accession
            NZ_JAVTUQ000000000.  This version of the project (01) has the
            accession number NZ_JAVTUQ010000000, and consists of sequences
            JAVTUQ010000001-JAVTUQ010000406.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 95x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_039991615.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:50:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,728
            CDSs (total)                      :: 4,647
            Genes (coding)                    :: 4,319
            CDSs (with protein)               :: 4,319
            Genes (RNA)                       :: 81
            rRNAs                             :: 2, 2, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 1, 5 (5S, 16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 328
            CDSs (without protein)            :: 328
            Pseudo Genes (ambiguous residues) :: 0 of 328
            Pseudo Genes (frameshifted)       :: 110 of 328
            Pseudo Genes (incomplete)         :: 170 of 328
            Pseudo Genes (internal stop)      :: 106 of 328
            Pseudo Genes (multiple problems)  :: 50 of 328
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4623418
                     /organism="Salmonella enterica subsp. enterica serovar
                     Paratyphi A"
                     /mol_type="genomic DNA"
                     /strain="ICDC-S.pA3109"
                     /serovar="Paratyphi A"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:54388"
                     /geo_loc_name="China: Guangxi"
                     /collection_date="2003-02"
WGS         JAVTUQ010000001-JAVTUQ010000406
WGS_SCAFLD  NZ_JAVTUQ010000001-NZ_JAVTUQ010000406
//
LOCUS       NZ_RAVO01000000      4824651 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Stenotrophomonas maltophilia strain PC227, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RAVO00000000
VERSION     NZ_RAVO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10131158
            Assembly: GCF_013464805.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
REFERENCE   1  (bases 1 to 4824651)
  AUTHORS   Yero,D., Huedo,P., Conchillo-Sole,O., Martinez-Servat,S., Mamat,U.,
            Coves,X., Llanas,F., Roca,I., Vila,J., Schaible,U.E., Daura,X. and
            Gibert,I.
  TITLE     Genetic Variants of the DSF Quorum Sensing System in
            Stenotrophomonas maltophilia Influence Virulence and Resistance
            Phenotypes Among Genotypically Diverse Clinical Isolates
  JOURNAL   Front Microbiol 11, 1160 (2020)
   PUBMED   32582100
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4824651)
  AUTHORS   Groschel,M., Kohl,T., Conchillo-Sole,O., Mamat,U., Yero,D.,
            Niemann,S., Daura,X. and Gibert,I.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-SEP-2018) IBB, Universitat Autonoma de Barcelona, MRB
            Building, Cerdanyola del Valles, Barcelona 08193, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RAVO00000000.1.
            The Stenotrophomonas maltophilia whole genome shotgun (WGS) project
            has the project accession NZ_RAVO00000000.  This version of the
            project (01) has the accession number NZ_RAVO01000000, and consists
            of sequences RAVO01000001-RAVO01000089.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. Bionumerics 7.6
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013464805.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:32:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,506
            CDSs (total)                      :: 4,436
            Genes (coding)                    :: 4,392
            CDSs (with protein)               :: 4,392
            Genes (RNA)                       :: 70
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 44
            CDSs (without protein)            :: 44
            Pseudo Genes (ambiguous residues) :: 0 of 44
            Pseudo Genes (frameshifted)       :: 12 of 44
            Pseudo Genes (incomplete)         :: 32 of 44
            Pseudo Genes (internal stop)      :: 5 of 44
            Pseudo Genes (multiple problems)  :: 3 of 44
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4824651
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /strain="PC227"
                     /isolation_source="Perineum swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /geo_loc_name="Germany: Berlin"
                     /lat_lon="52.525211 N 13.378660 E"
                     /collection_date="2012"
                     /collected_by="Charite Clinic"
WGS         RAVO01000001-RAVO01000089
WGS_SCAFLD  NZ_RAVO01000001-NZ_RAVO01000089
//
LOCUS       NZ_RAUC01000000      4638155 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Stenotrophomonas maltophilia strain PC314, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RAUC00000000
VERSION     NZ_RAUC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10131051
            Assembly: GCF_013464105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
REFERENCE   1  (bases 1 to 4638155)
  AUTHORS   Yero,D., Huedo,P., Conchillo-Sole,O., Martinez-Servat,S., Mamat,U.,
            Coves,X., Llanas,F., Roca,I., Vila,J., Schaible,U.E., Daura,X. and
            Gibert,I.
  TITLE     Genetic Variants of the DSF Quorum Sensing System in
            Stenotrophomonas maltophilia Influence Virulence and Resistance
            Phenotypes Among Genotypically Diverse Clinical Isolates
  JOURNAL   Front Microbiol 11, 1160 (2020)
   PUBMED   32582100
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4638155)
  AUTHORS   Groschel,M., Kohl,T., Conchillo-Sole,O., Mamat,U., Yero,D.,
            Niemann,S., Daura,X. and Gibert,I.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-SEP-2018) IBB, Universitat Autonoma de Barcelona, MRB
            Building, Cerdanyola del Valles, Barcelona 08193, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RAUC00000000.1.
            The Stenotrophomonas maltophilia whole genome shotgun (WGS) project
            has the project accession NZ_RAUC00000000.  This version of the
            project (01) has the accession number NZ_RAUC01000000, and consists
            of sequences RAUC01000001-RAUC01000165.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. Bionumerics 7.6
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013464105.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:23:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,242
            CDSs (total)                      :: 4,173
            Genes (coding)                    :: 4,143
            CDSs (with protein)               :: 4,143
            Genes (RNA)                       :: 69
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 30
            CDSs (without protein)            :: 30
            Pseudo Genes (ambiguous residues) :: 0 of 30
            Pseudo Genes (frameshifted)       :: 4 of 30
            Pseudo Genes (incomplete)         :: 28 of 30
            Pseudo Genes (internal stop)      :: 0 of 30
            Pseudo Genes (multiple problems)  :: 2 of 30
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4638155
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /strain="PC314"
                     /isolation_source="Perineum swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /geo_loc_name="Germany: Berlin"
                     /lat_lon="52.525211 N 13.378660 E"
                     /collection_date="2012"
                     /collected_by="Charite Clinic"
WGS         RAUC01000001-RAUC01000165
WGS_SCAFLD  NZ_RAUC01000001-NZ_RAUC01000165
//
LOCUS       NZ_LNON01000000      4702900 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Gallinarum strain
            BR_RS12, whole genome shotgun sequencing project.
ACCESSION   NZ_LNON00000000
VERSION     NZ_LNON00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04274130
            Assembly: GCF_001484835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Gallinarum
  ORGANISM  Salmonella enterica subsp. enterica serovar Gallinarum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4702900)
  AUTHORS   De Carli,S., Graf,T., Mayer,F.Q., Cibulski,S., Lehmann,F.K.,
            Fonseca,A.S., Ikuta,N. and Lunge,V.R.
  TITLE     Draft Genome Sequence of a Salmonella enterica subsp. enterica
            Serovar Gallinarum bv. Gallinarum Isolate Associated with Fowl
            Typhoid Outbreaks in Brazil
  JOURNAL   Genome Announc 4 (1), e00019-16 (2016)
   PUBMED   26950322
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4702900)
  AUTHORS   Lunge,V.R., De Carli,S., Graf,T. and Lehmann,F.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2015) Laboratorio de Diagnostico Molecular,
            Universidade Luterana do Brasil, Av. Farroupilha, Canoas, RS
            95425-900, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LNON00000000.1.
            The Salmonella enterica subsp. enterica serovar Gallinarum whole
            genome shotgun (WGS) project has the project accession
            NZ_LNON00000000.  This version of the project (01) has the
            accession number NZ_LNON01000000, and consists of sequences
            LNON01000001-LNON01000034.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 30-OCT-2015
            Assembly Method       :: SPAdes v. 3.6.1
            Genome Coverage       :: 183.0x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001484835.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:57:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,623
            CDSs (total)                      :: 4,532
            Genes (coding)                    :: 4,151
            CDSs (with protein)               :: 4,151
            Genes (RNA)                       :: 91
            rRNAs                             :: 8, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 2 (5S, 16S, 23S)
            partial rRNAs                     :: 6 (5S)
            tRNAs                             :: 69
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 381
            CDSs (without protein)            :: 381
            Pseudo Genes (ambiguous residues) :: 0 of 381
            Pseudo Genes (frameshifted)       :: 203 of 381
            Pseudo Genes (incomplete)         :: 133 of 381
            Pseudo Genes (internal stop)      :: 106 of 381
            Pseudo Genes (multiple problems)  :: 53 of 381
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4702900
                     /organism="Salmonella enterica subsp. enterica serovar
                     Gallinarum"
                     /mol_type="genomic DNA"
                     /strain="BR_RS12"
                     /serovar="Gallinarum"
                     /isolation_source="visceral organs"
                     /host="Gallus gallus domesticus"
                     /sub_species="enterica"
                     /db_xref="taxon:594"
                     /geo_loc_name="Brazil: Rio Grande do Sul State"
                     /lat_lon="29.88653463 S 51.23217768 W"
                     /collection_date="2014-05"
WGS         LNON01000001-LNON01000034
WGS_SCAFLD  NZ_LNON01000001-NZ_LNON01000034
//
LOCUS       NZ_JBSAXI010000000   4520368 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Scandinavium goeteborgense strain C10, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSAXI000000000
VERSION     NZ_JBSAXI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50273548
            Assembly: GCF_056156745.1
KEYWORDS    WGS; RefSeq.
SOURCE      Scandinavium goeteborgense
  ORGANISM  Scandinavium goeteborgense
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Scandinavium.
REFERENCE   1  (bases 1 to 4520368)
  AUTHORS   Knecht,C.A., Prack Mccormick,B., Alvarez,V.E., Buzzola,F.,
            Fuchs,J., Salgado,P., Campos,J., Quiroga,M.P. and Centron,D.
  TITLE     The use of glyphosate in agriculture contributes to the rise of
            species causing multidrug hospital-acquired infections
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4520368)
  AUTHORS   Knecht,C.A., Campos,J., Alvarez,V.E., Quiroga,M.P. and Centron,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JUL-2025) Institute of Research in Medical
            Microbiology and Parasitology, Universidad de Buenos Aires,
            CONICET, Paraguay 2155, Buenos Aires 1121, Argentina
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSAXI000000000.1.
            The Scandinavium goeteborgense whole genome shotgun (WGS) project
            has the project accession NZ_JBSAXI000000000.  This version of the
            project (01) has the accession number NZ_JBSAXI010000000, and
            consists of sequences JBSAXI010000001-JBSAXI010000049.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 302x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056156745.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:16:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,283
            CDSs (total)                      :: 4,192
            Genes (coding)                    :: 4,130
            CDSs (with protein)               :: 4,130
            Genes (RNA)                       :: 91
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 62
            CDSs (without protein)            :: 62
            Pseudo Genes (ambiguous residues) :: 0 of 62
            Pseudo Genes (frameshifted)       :: 37 of 62
            Pseudo Genes (incomplete)         :: 35 of 62
            Pseudo Genes (internal stop)      :: 15 of 62
            Pseudo Genes (multiple problems)  :: 21 of 62
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4520368
                     /organism="Scandinavium goeteborgense"
                     /mol_type="genomic DNA"
                     /strain="C10"
                     /isolation_source="sediment"
                     /db_xref="taxon:1851514"
                     /geo_loc_name="Argentina: Ramsar site at the Parana Delta"
                     /lat_lon="34.2228988 S 58.8975770 W"
                     /collection_date="2018-11"
WGS         JBSAXI010000001-JBSAXI010000049
WGS_SCAFLD  NZ_JBSAXI010000001-NZ_JBSAXI010000049
//
LOCUS       NZ_JAVTUJ010000000   4635602 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Paratyphi A strain
            ICDC-S.pA649, whole genome shotgun sequencing project.
ACCESSION   NZ_JAVTUJ000000000
VERSION     NZ_JAVTUJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37487052
            Assembly: GCF_039991465.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Paratyphi A (Salmonella
            paratyphi)
  ORGANISM  Salmonella enterica subsp. enterica serovar Paratyphi A
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4635602)
  AUTHORS   Kan,B.
  TITLE     Bacillus paratyphi A prevelence in China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4635602)
  AUTHORS   Kan,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) Diarrhea, Chinese Center for Disease
            Control and Prevention, Changbai Road, Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAVTUJ000000000.1.
            The Salmonella enterica subsp. enterica serovar Paratyphi A whole
            genome shotgun (WGS) project has the project accession
            NZ_JAVTUJ000000000.  This version of the project (01) has the
            accession number NZ_JAVTUJ010000000, and consists of sequences
            JAVTUJ010000001-JAVTUJ010000348.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 95x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_039991465.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:58:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,761
            CDSs (total)                      :: 4,674
            Genes (coding)                    :: 4,291
            CDSs (with protein)               :: 4,291
            Genes (RNA)                       :: 87
            rRNAs                             :: 2, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 1, 4 (5S, 16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 383
            CDSs (without protein)            :: 383
            Pseudo Genes (ambiguous residues) :: 0 of 383
            Pseudo Genes (frameshifted)       :: 112 of 383
            Pseudo Genes (incomplete)         :: 208 of 383
            Pseudo Genes (internal stop)      :: 132 of 383
            Pseudo Genes (multiple problems)  :: 61 of 383
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4635602
                     /organism="Salmonella enterica subsp. enterica serovar
                     Paratyphi A"
                     /mol_type="genomic DNA"
                     /strain="ICDC-S.pA649"
                     /serovar="Paratyphi A"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:54388"
                     /geo_loc_name="China: Guizhou"
                     /collection_date="2006-03"
WGS         JAVTUJ010000001-JAVTUJ010000348
WGS_SCAFLD  NZ_JAVTUJ010000001-NZ_JAVTUJ010000348
//
LOCUS       NZ_JBIRAG010000000   2789915 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Staphylococcus aureus strain BTF18T1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIRAG000000000
VERSION     NZ_JBIRAG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44467138
            Assembly: GCF_056153945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2789915)
  AUTHORS   Reasoner,S.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JAN-2025) Department of Pathology, Microbiology and
            Immunology, Vanderbilt University Medical Center, 1211 21st Avenue
            South, Nashville, TN 37212, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIRAG000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBIRAG000000000.  This version of the
            project (01) has the accession number NZ_JBIRAG010000000, and
            consists of sequences JBIRAG010000001-JBIRAG010000032.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 142x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056153945.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:52:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,793
            CDSs (total)                      :: 2,735
            Genes (coding)                    :: 2,659
            CDSs (with protein)               :: 2,659
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 42 of 76
            Pseudo Genes (incomplete)         :: 31 of 76
            Pseudo Genes (internal stop)      :: 23 of 76
            Pseudo Genes (multiple problems)  :: 18 of 76
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2789915
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="BTF18T1"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="USA: Nashville, TN"
                     /lat_lon="36.1424 N 86.8014 W"
                     /collection_date="2023-11"
                     /collected_by="VUMC Urology"
WGS         JBIRAG010000001-JBIRAG010000032
WGS_SCAFLD  NZ_JBIRAG010000001-NZ_JBIRAG010000032
//
LOCUS       NZ_JFZW01000000      2423914 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Snodgrassella communis strain wkB12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JFZW00000000
VERSION     NZ_JFZW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02677640
            Assembly: GCF_000695565.1
KEYWORDS    WGS; RefSeq.
SOURCE      Snodgrassella communis
  ORGANISM  Snodgrassella communis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Snodgrassella.
REFERENCE   1  (bases 1 to 2423914)
  AUTHORS   Kwong,W.K., Engel,P., Koch,H. and Moran,N.A.
  TITLE     Genomics and host specialization of honey bee and bumble bee gut
            symbionts
  JOURNAL   Proc Natl Acad Sci U S A 111 (31), 11509-11514 (2014)
   PUBMED   25053814
REFERENCE   2  (bases 1 to 2423914)
  AUTHORS   Kwong,W.K., Engel,P., Koch,H. and Moran,N.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-MAR-2014) Integrative Biology, University of Texas at
            Austin, 2506 Speedway, Austin, TX 78712, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JFZW00000000.1.
            The Snodgrassella communis whole genome shotgun (WGS) project has
            the project accession NZ_JFZW00000000.  This version of the project
            (01) has the accession number NZ_JFZW01000000, and consists of
            sequences JFZW01000001-JFZW01000034.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. 1.1.06
            Assembly Name          :: SnoalvwkB12v1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 500.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000695565.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:06:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,298
            CDSs (total)                      :: 2,202
            Genes (coding)                    :: 2,155
            CDSs (with protein)               :: 2,155
            Genes (RNA)                       :: 96
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 47
            CDSs (without protein)            :: 47
            Pseudo Genes (ambiguous residues) :: 0 of 47
            Pseudo Genes (frameshifted)       :: 7 of 47
            Pseudo Genes (incomplete)         :: 38 of 47
            Pseudo Genes (internal stop)      :: 6 of 47
            Pseudo Genes (multiple problems)  :: 4 of 47
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2423914
                     /organism="Snodgrassella communis"
                     /mol_type="genomic DNA"
                     /strain="wkB12"
                     /isolation_source="gut tissue"
                     /host="Bombus bimaculatus"
                     /db_xref="taxon:2946699"
                     /geo_loc_name="USA: West Haven, CT"
                     /lat_lon="41.26 N 72.99 W"
                     /collection_date="2011-06"
WGS         JFZW01000001-JFZW01000034
WGS_SCAFLD  NZ_JFZW01000001-NZ_JFZW01000034
//
LOCUS       NZ_JBEQIN010000000   4719495 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Luedinghausen strain
            MKDF 103, whole genome shotgun sequencing project.
ACCESSION   NZ_JBEQIN000000000
VERSION     NZ_JBEQIN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41784862
            Assembly: GCF_040281555.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Luedinghausen
  ORGANISM  Salmonella enterica subsp. enterica serovar Luedinghausen
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4719495)
  AUTHORS   Sati,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-JUN-2024) BACTERIA RESEARCH, NATIONAL VETERINARY
            RESEARCH INSTITUTE, VOM, VOM 930101, Nigeria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBEQIN000000000.1.
            The Salmonella enterica subsp. enterica serovar Luedinghausen whole
            genome shotgun (WGS) project has the project accession
            NZ_JBEQIN000000000.  This version of the project (01) has the
            accession number NZ_JBEQIN010000000, and consists of sequences
            JBEQIN010000001-JBEQIN010000058.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 16-MAY-2024
            Assembly Method        :: SPAdes v. 1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_040281555.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:58:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,578
            CDSs (total)                      :: 4,456
            Genes (coding)                    :: 4,323
            CDSs (with protein)               :: 4,323
            Genes (RNA)                       :: 122
            rRNAs                             :: 10, 7, 14 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1 (5S, 16S)
            partial rRNAs                     :: 3, 6, 14 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 58 of 133
            Pseudo Genes (incomplete)         :: 93 of 133
            Pseudo Genes (internal stop)      :: 29 of 133
            Pseudo Genes (multiple problems)  :: 37 of 133
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4719495
                     /organism="Salmonella enterica subsp. enterica serovar
                     Luedinghausen"
                     /mol_type="genomic DNA"
                     /strain="MKDF 103"
                     /serovar="Luedinghausen"
                     /isolation_source="feces"
                     /host="chicken"
                     /sub_species="enterica"
                     /db_xref="taxon:2564723"
                     /geo_loc_name="Nigeria: Wurukum market, Benue State"
                     /collection_date="2020"
                     /collected_by="NancyMilton Sati"
WGS         JBEQIN010000001-JBEQIN010000058
WGS_SCAFLD  NZ_JBEQIN010000001-NZ_JBEQIN010000058
//
LOCUS       NZ_JFZV01000000      2405731 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Snodgrassella communis strain wkB29, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JFZV00000000
VERSION     NZ_JFZV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02677641
            Assembly: GCF_000695545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Snodgrassella communis
  ORGANISM  Snodgrassella communis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Snodgrassella.
REFERENCE   1  (bases 1 to 2405731)
  AUTHORS   Kwong,W.K., Engel,P., Koch,H. and Moran,N.A.
  TITLE     Genomics and host specialization of honey bee and bumble bee gut
            symbionts
  JOURNAL   Proc Natl Acad Sci U S A 111 (31), 11509-11514 (2014)
   PUBMED   25053814
REFERENCE   2  (bases 1 to 2405731)
  AUTHORS   Kwong,W.K., Engel,P., Koch,H. and Moran,N.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-MAR-2014) Integrative Biology, University of Texas at
            Austin, 2506 Speedway, Austin, TX 78712, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JFZV00000000.1.
            The Snodgrassella communis whole genome shotgun (WGS) project has
            the project accession NZ_JFZV00000000.  This version of the project
            (01) has the accession number NZ_JFZV01000000, and consists of
            sequences JFZV01000001-JFZV01000088.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. 1.1.06
            Assembly Name          :: SnoalvwkB29v1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 500.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000695545.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:07:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,278
            CDSs (total)                      :: 2,201
            Genes (coding)                    :: 2,155
            CDSs (with protein)               :: 2,155
            Genes (RNA)                       :: 77
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 7 of 46
            Pseudo Genes (incomplete)         :: 38 of 46
            Pseudo Genes (internal stop)      :: 5 of 46
            Pseudo Genes (multiple problems)  :: 3 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2405731
                     /organism="Snodgrassella communis"
                     /mol_type="genomic DNA"
                     /strain="wkB29"
                     /isolation_source="gut tissue"
                     /host="Bombus vagans"
                     /db_xref="taxon:2946699"
                     /geo_loc_name="USA: West Haven, CT"
                     /lat_lon="41.26 N 72.99 W"
                     /collection_date="2011-06"
WGS         JFZV01000001-JFZV01000088
WGS_SCAFLD  NZ_JFZV01000001-NZ_JFZV01000088
//
LOCUS       NZ_JBSWYC010000000   3652289 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Seonamhaeicola sp. ABD4_175, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWYC000000000
VERSION     NZ_JBSWYC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861903
            Assembly: GCF_056160885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Seonamhaeicola sp. ABD4_175
  ORGANISM  Seonamhaeicola sp. ABD4_175
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae.
REFERENCE   1  (bases 1 to 3652289)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWYC000000000.1.
            The Seonamhaeicola sp. ABD4_175 whole genome shotgun (WGS) project
            has the project accession NZ_JBSWYC000000000.  This version of the
            project (01) has the accession number NZ_JBSWYC010000000, and
            consists of sequences JBSWYC010000001-JBSWYC010000030.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 155x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056160885.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:36:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,111
            CDSs (total)                      :: 3,061
            Genes (coding)                    :: 3,054
            CDSs (with protein)               :: 3,054
            Genes (RNA)                       :: 50
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 2 of 7
            Pseudo Genes (incomplete)         :: 4 of 7
            Pseudo Genes (internal stop)      :: 1 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3652289
                     /organism="Seonamhaeicola sp. ABD4_175"
                     /mol_type="genomic DNA"
                     /strain="ABD4_175"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477770"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWYC010000001-JBSWYC010000030
WGS_SCAFLD  NZ_JBSWYC010000001-NZ_JBSWYC010000030
//
LOCUS       NZ_JAKEKJ010000000   4693856 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Paratyphi C strain S2,
            whole genome shotgun sequencing project.
ACCESSION   NZ_JAKEKJ000000000
VERSION     NZ_JAKEKJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN24764408
            Assembly: GCF_021491315.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Paratyphi C
  ORGANISM  Salmonella enterica subsp. enterica serovar Paratyphi C
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4693856)
  AUTHORS   Zheng,B.
  TITLE     A Rare Outbreak of Salmonella Paratyphi C Infection in China Caused
            by the Pathogen Closely Related to Isolates Detected in Kenya
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4693856)
  AUTHORS   Zheng,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-JAN-2022) State Key Laboratory for Diagnosis and
            Treatment of Infectious Diseases, The First Affiliated Hospital,
            School of Medicine, Zhejiang University, Qingchun, Hangzhou 310000,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAKEKJ000000000.1.
            The Salmonella enterica subsp. enterica serovar Paratyphi C whole
            genome shotgun (WGS) project has the project accession
            NZ_JAKEKJ000000000.  This version of the project (01) has the
            accession number NZ_JAKEKJ010000000, and consists of sequences
            JAKEKJ010000001-JAKEKJ010000038.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_021491315.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:37:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,572
            CDSs (total)                      :: 4,484
            Genes (coding)                    :: 4,369
            CDSs (with protein)               :: 4,369
            Genes (RNA)                       :: 88
            rRNAs                             :: 6, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1 (5S, 16S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 115
            CDSs (without protein)            :: 115
            Pseudo Genes (ambiguous residues) :: 0 of 115
            Pseudo Genes (frameshifted)       :: 43 of 115
            Pseudo Genes (incomplete)         :: 88 of 115
            Pseudo Genes (internal stop)      :: 17 of 115
            Pseudo Genes (multiple problems)  :: 30 of 115
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4693856
                     /organism="Salmonella enterica subsp. enterica serovar
                     Paratyphi C"
                     /mol_type="genomic DNA"
                     /strain="S2"
                     /serovar="Paratyphi C"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:57046"
                     /geo_loc_name="China: Shandong"
                     /lat_lon="36.40 N 117.00 E"
                     /collection_date="2020-09-11"
                     /collected_by="Shuang Wang"
WGS         JAKEKJ010000001-JAKEKJ010000038
WGS_SCAFLD  NZ_JAKEKJ010000001-NZ_JAKEKJ010000038
//
LOCUS       NZ_ATYK01000000      3920099 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Sphingomonas phyllosphaerae FA2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ATYK00000000
VERSION     NZ_ATYK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02441573
            Assembly: GCF_000427645.1
KEYWORDS    WGS; IMPROVED_HIGH_QUALITY_DRAFT; RefSeq.
SOURCE      Sphingomonas phyllosphaerae FA2
  ORGANISM  Sphingomonas phyllosphaerae FA2
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (bases 1 to 3920099)
  AUTHORS   Vorholt,J., Huntemann,M., Han,J., Chen,A., Kyrpides,N.,
            Mavromatis,K., Markowitz,V., Palaniappan,K., Ivanova,N.,
            Schaumberg,A., Pati,A., Liolios,K., Nordberg,H.P., Cantor,M.N.,
            Hua,S.X. and Woyke,T.
  CONSRTM   DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JUL-2013) DOE Joint Genome Institute, 2800 Mitchell
            Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ATYK00000000.1.
            The Sphingomonas phyllosphaerae FA2 whole genome shotgun (WGS)
            project has the project accession NZ_ATYK00000000.  This version of
            the project (01) has the accession number NZ_ATYK01000000, and
            consists of sequences ATYK01000001-ATYK01000004.
            URL -- http://www.jgi.doe.gov
            JGI Project ID: 404849
            Source DNA and Organism available from Julia  Vorholt
            (vorholt@micro.biol.ethz.ch)
            Source DNA available from Julia  Vorholt
            (vorholt@micro.biol.ethz.ch)
            Organism available from Julia  Vorholt (vorholt@micro.biol.ethz.ch)
            Contacts: Julia  Vorholt (vorholt@micro.biol.ethz.ch)
                      Tanja Woyke (microbe@cuba.jgi-psf.org)
            Whole genome sequencing and draft assembly at JGI-PGF
            Annotation by JGI-ORNL
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376)
            Full annotations are available from IMG.
            
            ##MIGS-Data-START##
            assembly                 :: Velvet v. 1.1.05; ALLPATHS v. 39750;
                                        Phrap v. 4.24
            country                  :: Argentina
            investigation_type       :: bacteria_archaea
            isol_growth_condt        :: 15545449
            lat_lon                  :: -31.398 -64.182
            project_name             :: Sphingomonas phyllosphaerae FA2
            sequencing_meth          :: WGS
            ref_biomaterial          :: DSM 17258
            rel_to_oxygen            :: Aerobe
            finishing_strategy       :: Level 2: High-Quality Draft
            GOLD Stamp ID            :: Gi13778
            Current Finishing Status :: Level 2: High-Quality Draft
            Type Strain              :: Yes
            Funding Program          :: DOE-CSP 2011
            Isolation Site           :: phyllosphere of Acacia caven
            Host Name                :: Acacia caven
            Cell Shape               :: Rod-shaped
            Motility                 :: Motile
            Temperature Range        :: Mesophile
            Gram Staining            :: Gram-
            ##MIGS-Data-END##
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: Improved High-Quality Draft
            Current Finishing Status :: Improved High-Quality Draft
            Assembly Method          :: Velvet v. 1.1.05; ALLPATHS v. 39750;
                                        Phrap v. 4.24
            Genome Coverage          :: Unknown
            Sequencing Technology    :: Unknown
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000427645.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:08:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,650
            CDSs (total)                      :: 3,592
            Genes (coding)                    :: 3,560
            CDSs (with protein)               :: 3,560
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 32
            CDSs (without protein)            :: 32
            Pseudo Genes (ambiguous residues) :: 0 of 32
            Pseudo Genes (frameshifted)       :: 11 of 32
            Pseudo Genes (incomplete)         :: 26 of 32
            Pseudo Genes (internal stop)      :: 3 of 32
            Pseudo Genes (multiple problems)  :: 7 of 32
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3920099
                     /organism="Sphingomonas phyllosphaerae FA2"
                     /mol_type="genomic DNA"
                     /strain="FA2"
                     /host="Vachellia caven"
                     /type_material="type strain of Sphingomonas
                     phyllosphaerae"
                     /db_xref="taxon:1090319"
                     /geo_loc_name="Argentina"
                     /lat_lon="31.398 S 64.182 W"
WGS         ATYK01000001-ATYK01000004
WGS_SCAFLD  NZ_ATYK01000004
WGS_SCAFLD  NZ_KE386571
//
LOCUS       NZ_JBPBBC020000000   5107830 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Serratia marcescens strain ROT_WT, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBPBBC000000000
VERSION     NZ_JBPBBC000000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN48825062
            Assembly: GCF_055728185.2
KEYWORDS    WGS; RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (bases 1 to 5107830)
  AUTHORS   Mammeri,H.
  TITLE     Resistance to carbapenems and cefiderocol due to CpxA_R33H
            replacement in S. marcescens
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5107830)
  AUTHORS   Mammeri,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2026) Laboratory of Bacteriology, Cochin
            Hospital, 27 rue du Foubourg Saint Jacques, Paris 75014, France
REFERENCE   3  (bases 1 to 5107830)
  AUTHORS   Mammeri,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-MAY-2025) Laboratory of Bacteriology, Cochin
            Hospital, 27 rue du Foubourg Saint Jacques, Paris 75014, France
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPBBC000000000.2.
            
            On Mar 26, 2026 this sequence version replaced
            NZ_JBPBBC000000000.1.
            The Serratia marcescens whole genome shotgun (WGS) project has the
            project accession NZ_JBPBBC000000000.  This version of the project
            (02) has the accession number NZ_JBPBBC020000000, and consists of
            sequence JBPBBC020000001.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 18-MAY-2025
            Assembly Method        :: Unicycler v. 0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1828.0x
            Sequencing Technology  :: Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_055728185.2-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:05:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,796
            CDSs (total)                      :: 4,670
            Genes (coding)                    :: 4,642
            CDSs (with protein)               :: 4,642
            Genes (RNA)                       :: 126
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 16
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 9 of 29
            Pseudo Genes (incomplete)         :: 18 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5107830
                     /organism="Serratia marcescens"
                     /mol_type="genomic DNA"
                     /strain="ROT_WT"
                     /isolation_source="meconium"
                     /host="Homo sapiens"
                     /db_xref="taxon:615"
                     /geo_loc_name="France: Paris"
                     /collection_date="2025-01-08"
WGS         JBPBBC020000001
WGS_SCAFLD  NZ_CM149603
//
LOCUS       NZ_JBEQJI010000000   4861449 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Offa strain MGF 6,
            whole genome shotgun sequencing project.
ACCESSION   NZ_JBEQJI000000000
VERSION     NZ_JBEQJI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41784841
            Assembly: GCF_040280985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Offa
  ORGANISM  Salmonella enterica subsp. enterica serovar Offa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4861449)
  AUTHORS   Sati,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-JUN-2024) BACTERIA RESEARCH, NATIONAL VETERINARY
            RESEARCH INSTITUTE, VOM, VOM 930101, Nigeria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBEQJI000000000.1.
            The Salmonella enterica subsp. enterica serovar Offa whole genome
            shotgun (WGS) project has the project accession NZ_JBEQJI000000000.
            This version of the project (01) has the accession number
            NZ_JBEQJI010000000, and consists of sequences
            JBEQJI010000001-JBEQJI010000103.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 16-MAY-2024
            Assembly Method        :: SPAdes v. 1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_040280985.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:50:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,787
            CDSs (total)                      :: 4,651
            Genes (coding)                    :: 4,490
            CDSs (with protein)               :: 4,490
            Genes (RNA)                       :: 136
            rRNAs                             :: 11, 7, 22 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1 (5S, 16S)
            partial rRNAs                     :: 4, 6, 22 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 17
            Pseudo Genes (total)              :: 161
            CDSs (without protein)            :: 161
            Pseudo Genes (ambiguous residues) :: 0 of 161
            Pseudo Genes (frameshifted)       :: 55 of 161
            Pseudo Genes (incomplete)         :: 135 of 161
            Pseudo Genes (internal stop)      :: 20 of 161
            Pseudo Genes (multiple problems)  :: 42 of 161
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4861449
                     /organism="Salmonella enterica subsp. enterica serovar
                     Offa"
                     /mol_type="genomic DNA"
                     /strain="MGF 6"
                     /serovar="Offa"
                     /isolation_source="feces"
                     /host="chicken"
                     /sub_species="enterica"
                     /db_xref="taxon:2564879"
                     /geo_loc_name="Nigeria: Mangu market, Plateau State"
                     /collection_date="2019"
                     /collected_by="NancyMilton Sati"
WGS         JBEQJI010000001-JBEQJI010000103
WGS_SCAFLD  NZ_JBEQJI010000001-NZ_JBEQJI010000103
//
LOCUS       NZ_AFVQ02000000      3009527 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Sporolactobacillus inulinus CASD, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AFVQ00000000
VERSION     NZ_AFVQ00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02471147
            Assembly: GCF_000222445.2
KEYWORDS    WGS; RefSeq.
SOURCE      Sporolactobacillus inulinus CASD
  ORGANISM  Sporolactobacillus inulinus CASD
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Sporolactobacillaceae; Sporolactobacillus.
REFERENCE   1  (bases 1 to 3009527)
  AUTHORS   Yu,B., Su,F., Wang,L., Xu,K., Zhao,B. and Xu,P.
  TITLE     Draft genome sequence of Sporolactobacillus inulinus strain CASD,
            an efficient D-lactic acid-producing bacterium with
            high-concentration lactate tolerance capability
  JOURNAL   J Bacteriol 193 (20), 5864-5865 (2011)
   PUBMED   21952540
REFERENCE   2  (bases 1 to 3009527)
  AUTHORS   Yu,B., Wang,L. and Xu,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-MAY-2015) Chinese Academy of Sciences, CAS Key
            Laboratory of Microbial Physiological and Metabolic Engineering,
            Institute of Microbiology, 1 Beichen West Road, Chaoyang District,
            Beijing 100101, China
REFERENCE   3  (bases 1 to 3009527)
  AUTHORS   Yu,B., Su,F. and Xu,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2011) Department of Industrial Microbiology and
            Biotechnology, The Institute of Microbiology, Chinese Academy of
            Sciences, No. 1 West Beichen Road, Chaoyang District, Beijing,
            Beijing 100101, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AFVQ00000000.2.
            
            On May 26, 2015 this sequence version replaced NZ_AFVQ00000000.1.
            The Sporolactobacillus inulinus CASD whole genome shotgun (WGS)
            project has the project accession NZ_AFVQ00000000.  This version of
            the project (02) has the accession number NZ_AFVQ02000000, and
            consists of sequences AFVQ02000001-AFVQ02000236.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. 1.2.03
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 500.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000222445.2-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:42:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,884
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,808
            CDSs (with protein)               :: 2,808
            Genes (RNA)                       :: 28
            rRNAs                             :: 3, 2 (16S, 23S)
            partial rRNAs                     :: 3, 2 (16S, 23S)
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 48
            CDSs (without protein)            :: 48
            Pseudo Genes (ambiguous residues) :: 0 of 48
            Pseudo Genes (frameshifted)       :: 19 of 48
            Pseudo Genes (incomplete)         :: 31 of 48
            Pseudo Genes (internal stop)      :: 7 of 48
            Pseudo Genes (multiple problems)  :: 8 of 48
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3009527
                     /organism="Sporolactobacillus inulinus CASD"
                     /mol_type="genomic DNA"
                     /strain="CASD"
                     /db_xref="taxon:1069536"
WGS         AFVQ02000001-AFVQ02000236
WGS_SCAFLD  NZ_AFVQ02000001-NZ_AFVQ02000236
//
LOCUS       NZ_ATWM01000000      3396505 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Serinicoccus marinus DSM 15273, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ATWM00000000
VERSION     NZ_ATWM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02441241
            Assembly: GCF_000421245.1
KEYWORDS    WGS; IMPROVED_HIGH_QUALITY_DRAFT; RefSeq.
SOURCE      Serinicoccus marinus DSM 15273
  ORGANISM  Serinicoccus marinus DSM 15273
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Serinicoccus.
REFERENCE   1  (bases 1 to 3396505)
  AUTHORS   Kyrpides,N., Huntemann,M., Han,J., Chen,A., Mavromatis,K.,
            Markowitz,V., Palaniappan,K., Ivanova,N., Schaumberg,A., Pati,A.,
            Liolios,K., Nordberg,H.P., Cantor,M.N., Hua,S.X. and Woyke,T.
  CONSRTM   DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JUL-2013) DOE Joint Genome Institute, 2800 Mitchell
            Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ATWM00000000.1.
            The Serinicoccus marinus DSM 15273 whole genome shotgun (WGS)
            project has the project accession NZ_ATWM00000000.  This version of
            the project (01) has the accession number NZ_ATWM01000000, and
            consists of sequences ATWM01000001-ATWM01000029.
            URL -- http://www.jgi.doe.gov
            JGI Project ID: 1013954
            Source DNA and organism available from Hans-Peter Klenk at the
            German Collection of Microorganisms and Cell Cultures (DSMZ)
            (hans-peter.klenk@dsmz.de)
            Contacts: Nikos   Kyrpides (nckyrpides@lbl.gov)
                      Tanja Woyke (microbe@cuba.jgi-psf.org)
            Whole genome sequencing and draft assembly at JGI
            Annotation by JGI
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376)
            Full annotations are available from IMG.
            
            ##MIGS-Data-START##
            country             :: South Korea
            environment         :: Sea water; Aquatic; Marine
            investigation_type  :: bacteria_archaea
            isol_growth_condt   :: 15388714
            project_name        :: Serinicoccus marinus DSM 15273
            sequencing_meth     :: WGS
            ref_biomaterial     :: DSM 15273
            rel_to_oxygen       :: Aerobe
            finishing_strategy  :: Level 1: Standard Draft
            GOLD Stamp ID       :: Gi11900
            Type Strain         :: Yes
            Funding Program     :: DOE-CSP 2012
            Isolation Site      :: Sea-water sample
            Cell Shape          :: Coccus-shaped
            Motility            :: Nonmotile
            Sporulation         :: Nonsporulating
            Temperature Range   :: Mesophile
            Temperature Optimum :: 35 C
            Salinity            :: Halophile
            pH                  :: 6-11
            Gram Staining       :: Gram+
            Phenotypes          :: Catalase positive
            ##MIGS-Data-END##
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: Improved High-Quality Draft
            Current Finishing Status :: Improved High-Quality Draft
            Assembly Method          :: Unknown program v. before 2013-05-13
            Genome Coverage          :: Unknown
            Sequencing Technology    :: Illumina HiSeq 2000
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000421245.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:03:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,301
            CDSs (total)                      :: 3,245
            Genes (coding)                    :: 3,169
            CDSs (with protein)               :: 3,169
            Genes (RNA)                       :: 56
            rRNAs                             :: 2, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 3 (16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 19 of 76
            Pseudo Genes (incomplete)         :: 64 of 76
            Pseudo Genes (internal stop)      :: 7 of 76
            Pseudo Genes (multiple problems)  :: 12 of 76
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3396505
                     /organism="Serinicoccus marinus DSM 15273"
                     /mol_type="genomic DNA"
                     /strain="DSM 15273"
                     /culture_collection="DSM:15273"
                     /type_material="type strain of Serinicoccus marinus"
                     /db_xref="taxon:1123251"
                     /geo_loc_name="South Korea"
WGS         ATWM01000001-ATWM01000029
WGS_SCAFLD  NZ_ATWM01000001-NZ_ATWM01000029
//
LOCUS       NZ_MYBQ01000000      4827476 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Kentucky strain KS 6,
            whole genome shotgun sequencing project.
ACCESSION   NZ_MYBQ00000000
VERSION     NZ_MYBQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02368597
            Assembly: GCF_002065495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Kentucky
  ORGANISM  Salmonella enterica subsp. enterica serovar Kentucky
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4827476)
  AUTHORS   Kong,N., Davis,M., Arabyan,N., Thao,K., Ng,W., Huang,B.C., Chen,P.,
            Weis,A.M., Chin,N., Foutouhi,S., Foutouhi,A., Storey,D., Xie,Y.,
            Kaufman,J. and Weimer,B.C.
  TITLE     Salmonella 100K Pathogen Genome Project
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4827476)
  AUTHORS   Kong,N., Davis,M., Arabyan,N., Thao,K., Ng,W., Huang,B.C., Chen,P.,
            Weis,A.M., Chin,N., Foutouhi,S., Foutouhi,A., Storey,D., Xie,Y.,
            Kaufman,J. and Weimer,B.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAR-2017) VM: PHR, UC Davis, 1089 Veterinary Medicine
            Dr, VM3B Rm 4016, Davis, CA 95616, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MYBQ00000000.1.
            The Salmonella enterica subsp. enterica serovar Kentucky whole
            genome shotgun (WGS) project has the project accession
            NZ_MYBQ00000000.  This version of the project (01) has the
            accession number NZ_MYBQ01000000, and consists of sequences
            MYBQ01000001-MYBQ01000376.
            Bacteria available from Dr. Bart C. Weimer.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 119x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002065495.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:09:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,970
            CDSs (total)                      :: 4,884
            Genes (coding)                    :: 4,646
            CDSs (with protein)               :: 4,646
            Genes (RNA)                       :: 86
            rRNAs                             :: 5, 1, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2, 4 (5S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 238
            CDSs (without protein)            :: 238
            Pseudo Genes (ambiguous residues) :: 0 of 238
            Pseudo Genes (frameshifted)       :: 45 of 238
            Pseudo Genes (incomplete)         :: 204 of 238
            Pseudo Genes (internal stop)      :: 22 of 238
            Pseudo Genes (multiple problems)  :: 30 of 238
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4827476
                     /organism="Salmonella enterica subsp. enterica serovar
                     Kentucky"
                     /mol_type="genomic DNA"
                     /strain="KS 6"
                     /serovar="Kentucky"
                     /isolation_source="chicken"
                     /host="Gallus gallus"
                     /sub_species="enterica"
                     /db_xref="taxon:192955"
                     /geo_loc_name="Nigeria"
                     /collection_date="2007"
                     /collected_by="Technical University Of Denmark"
WGS         MYBQ01000001-MYBQ01000376
WGS_SCAFLD  NZ_MYBQ01000001-NZ_MYBQ01000376
//
LOCUS       NZ_JARALB010000000   4917656 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Indiana strain
            12-106NL, whole genome shotgun sequencing project.
ACCESSION   NZ_JARALB000000000
VERSION     NZ_JARALB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN33222176
            Assembly: GCF_036959105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Indiana
  ORGANISM  Salmonella enterica subsp. enterica serovar Indiana
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4917656)
  AUTHORS   Nguyen,T.Q., Polev,D.E., Saitova,A.T., Makarova,M.A.,
            Matveeva,Z.N., Nguyen,V.H., Tran,P.T., Tran,L.T., Vo,T.K.,
            Nguyen,L.T., Nguyen,T.L., Nguyen,L.T., Egorova,S.A. and
            Kaftyreva,L.A.
  TITLE     Antimicrobial resistance mechanisms of Salmonella isolated in
            people and food items in South Vietnam
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4917656)
  AUTHORS   Nguyen,T.Q., Polev,D.E., Saitova,A.T., Makarova,M.A.,
            Matveeva,Z.N., Nguyen,V.H., Tran,P.T., Tran,L.T., Vo,T.K.,
            Nguyen,L.T., Nguyen,T.L., Nguyen,L.T., Egorova,S.A. and
            Kaftyreva,L.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-FEB-2023) Metagenomics research group,
            Saint-Petersburg Pasteur Institute, Mira, 14, Saint-Petersburg
            197101, Russia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARALB000000000.1.
            The Salmonella enterica subsp. enterica serovar Indiana whole
            genome shotgun (WGS) project has the project accession
            NZ_JARALB000000000.  This version of the project (01) has the
            accession number NZ_JARALB010000000, and consists of sequences
            JARALB010000001-JARALB010000107.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 12-DEC-2022
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 82x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_036959105.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:48:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,874
            CDSs (total)                      :: 4,736
            Genes (coding)                    :: 4,555
            CDSs (with protein)               :: 4,555
            Genes (RNA)                       :: 138
            rRNAs                             :: 11, 12, 24 (5S, 16S, 23S)
            complete rRNAs                    :: 9 (5S)
            partial rRNAs                     :: 2, 12, 24 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 181
            CDSs (without protein)            :: 181
            Pseudo Genes (ambiguous residues) :: 0 of 181
            Pseudo Genes (frameshifted)       :: 58 of 181
            Pseudo Genes (incomplete)         :: 148 of 181
            Pseudo Genes (internal stop)      :: 26 of 181
            Pseudo Genes (multiple problems)  :: 43 of 181
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4917656
                     /organism="Salmonella enterica subsp. enterica serovar
                     Indiana"
                     /mol_type="genomic DNA"
                     /strain="12-106NL"
                     /serovar="Indiana"
                     /isolation_source="broiler fecal"
                     /host="broiler chicken"
                     /sub_species="enterica"
                     /db_xref="taxon:286783"
                     /geo_loc_name="Viet Nam: Dong Nai, Livestock farm in Thong
                     Nhat"
                     /lat_lon="11.0195 N 107.1946 E"
                     /collection_date="2012-07-01"
                     /collected_by="Pasteur institute of Ho Chi Minh city, Viet
                     Nam"
WGS         JARALB010000001-JARALB010000107
WGS_SCAFLD  NZ_JARALB010000001-NZ_JARALB010000107
//
LOCUS       NZ_ALVR01000000      5322800 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Spirulina subsalsa PCC 9445, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ALVR00000000
VERSION     NZ_ALVR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02261255
            Assembly: GCF_000314005.1
KEYWORDS    WGS; GSC:MIGS:2.1; IMPROVED_HIGH_QUALITY_DRAFT; RefSeq.
SOURCE      Spirulina subsalsa PCC 9445
  ORGANISM  Spirulina subsalsa PCC 9445
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Spirulinales;
            Spirulinaceae; Spirulina.
REFERENCE   1  (bases 1 to 5322800)
  AUTHORS   Shih,P.M., Wu,D., Latifi,A., Axen,S.D., Fewer,D.P., Talla,E.,
            Calteau,A., Cai,F., Tandeau de Marsac,N., Rippka,R., Herdman,M.,
            Sivonen,K., Coursin,T., Laurent,T., Goodwin,L., Nolan,M.,
            Davenport,K.W., Han,C.S., Rubin,E.M., Eisen,J.A., Woyke,T.,
            Gugger,M. and Kerfeld,C.A.
  TITLE     Improving the coverage of the cyanobacterial phylum using
            diversity-driven genome sequencing
  JOURNAL   Proc Natl Acad Sci U S A 110 (3), 1053-1058 (2013)
   PUBMED   23277585
REFERENCE   2  (bases 1 to 5322800)
  AUTHORS   Gugger,M., Courson,T., Rippka,R., De Marsac,N.T., Huntemann,M.,
            Wei,C.-L., Han,J., Detter,J.C., Han,C., Tapia,R., Chen,A.,
            Kyrpides,N., Mavromatis,K., Markowitz,V., Szeto,E., Ivanova,N.,
            Pagani,I., Pati,A., Goodwin,L., Nordberg,H.P., Cantor,M.N.,
            Hua,S.X., Woyke,T. and Kerfeld,C.A.
  CONSRTM   DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (02-NOV-2012) DOE Joint Genome Institute, 2800 Mitchell
            Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ALVR00000000.1.
            The Spirulina subsalsa PCC 9445 whole genome shotgun (WGS) project
            has the project accession NZ_ALVR00000000.  This version of the
            project (01) has the accession number NZ_ALVR01000000, and consists
            of sequences ALVR01000001-ALVR01000010.
            URL -- http://www.jgi.doe.gov
            JGI Project ID: 401204
            Source DNA and Organism available from Cheryl A. Kerfeld
            (CKerfeld@lbl.gov)
             Contacts: Cheryl A. Kerfeld (CKerfeld@lbl.gov)
            Whole genome sequencing and draft assembly at JGI-PGF.  Annotation
            by JGI-ORNL.  The JGI and collaborators endorse the principles for
            the distribution and use of large scale sequencing data adopted by
            the larger genome sequencing community and urge users of this data
            to follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376).
            
            ##MIGS-Data-START##
            investigation_type  :: bacteria_archaea
            project_name        :: Spirulina sp. PCC 9445
            collection_date     :: Missing
            lat_lon             :: Missing
            depth               :: Missing
            alt_elev            :: Missing
            country             :: Missing
            environment         :: Missing
            num_replicons       :: Missing
            ref_biomaterial     :: PCC 9445
            biotic_relationship :: Free living
            trophic_level       :: Missing
            rel_to_oxygen       :: Missing
            isol_growth_condt   :: Missing
            sequencing_meth     :: WGS
            assembly            :: Newbler v. 2.3 (pre-release), VELVET v.
                                   1.0.13, Parallel phrap v. 4.24 SPS
            finishing_strategy  :: Improved High-Quality Draft
            GOLD Stamp ID       :: Gi05878
            Funding Program     :: DOE-GEBA 2009
            Gene Calling Method :: Prodigal 1.4, GenePRIMP
            Temperature Range   :: Mesophile
            Gram Staining       :: Gram-
            Diseases            :: None
            ##MIGS-Data-END##
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: Improved High-Quality Draft
            Current Finishing Status :: Improved High-Quality Draft
            Assembly Method          :: Newbler v. 2.3 (pre-release), VELVET v.
                                        1.0.13, Parallel phrap v. 4.24 SPS
            Genome Coverage          :: 30x
            Sequencing Technology    :: 454; Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000314005.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:05:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,680
            CDSs (total)                      :: 4,629
            Genes (coding)                    :: 4,474
            CDSs (with protein)               :: 4,474
            Genes (RNA)                       :: 51
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 155
            CDSs (without protein)            :: 155
            Pseudo Genes (ambiguous residues) :: 0 of 155
            Pseudo Genes (frameshifted)       :: 33 of 155
            Pseudo Genes (incomplete)         :: 131 of 155
            Pseudo Genes (internal stop)      :: 12 of 155
            Pseudo Genes (multiple problems)  :: 21 of 155
            CRISPR Arrays                     :: 17
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5322800
                     /organism="Spirulina subsalsa PCC 9445"
                     /mol_type="genomic DNA"
                     /strain="PCC 9445"
                     /isolation_source="not provided; submitted under MIGS 2.1"
                     /culture_collection="PCC:9445"
                     /db_xref="taxon:1173029"
WGS         ALVR01000001-ALVR01000010
WGS_SCAFLD  NZ_ALVR01000010
WGS_SCAFLD  NZ_JH980292
//
LOCUS       NZ_SJQM01000000      4958318 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Indiana strain CH5,
            whole genome shotgun sequencing project.
ACCESSION   NZ_SJQM00000000
VERSION     NZ_SJQM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10985823
            Assembly: GCF_004360775.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Indiana
  ORGANISM  Salmonella enterica subsp. enterica serovar Indiana
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4958318)
  AUTHORS   Wang,W.
  TITLE     Complete nucleotide sequence analysis of Salmonella enterica subsp.
            enterica serovar Indiana from chicken
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4958318)
  AUTHORS   Wang,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-FEB-2019) Microbiology Laboratory, China National
            Center for Food Safety Risk Assessment, No. 7 Panjiayuannanli Road,
            Beijing 100021, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SJQM00000000.1.
            The Salmonella enterica subsp. enterica serovar Indiana whole
            genome shotgun (WGS) project has the project accession
            NZ_SJQM00000000.  This version of the project (01) has the
            accession number NZ_SJQM01000000, and consists of sequences
            SJQM01000001-SJQM01000082.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 1.05
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004360775.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:09:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,885
            CDSs (total)                      :: 4,774
            Genes (coding)                    :: 4,549
            CDSs (with protein)               :: 4,549
            Genes (RNA)                       :: 111
            rRNAs                             :: 8, 6, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1 (5S, 16S)
            partial rRNAs                     :: 1, 5, 8 (5S, 16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 225
            CDSs (without protein)            :: 225
            Pseudo Genes (ambiguous residues) :: 0 of 225
            Pseudo Genes (frameshifted)       :: 84 of 225
            Pseudo Genes (incomplete)         :: 175 of 225
            Pseudo Genes (internal stop)      :: 47 of 225
            Pseudo Genes (multiple problems)  :: 67 of 225
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4958318
                     /organism="Salmonella enterica subsp. enterica serovar
                     Indiana"
                     /mol_type="genomic DNA"
                     /strain="CH5"
                     /serovar="Indiana"
                     /isolation_source="chicken carcass"
                     /host="chicken"
                     /sub_species="enterica"
                     /db_xref="taxon:286783"
                     /geo_loc_name="China"
                     /collection_date="2014"
WGS         SJQM01000001-SJQM01000082
WGS_SCAFLD  NZ_SJQM01000001-NZ_SJQM01000082
//
LOCUS       NZ_MYYU01000000      4972684 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Kintambo strain
            2010K-2376, whole genome shotgun sequencing project.
ACCESSION   NZ_MYYU00000000
VERSION     NZ_MYYU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03265038
            Assembly: GCF_002045995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Kintambo
  ORGANISM  Salmonella enterica subsp. enterica serovar Kintambo
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4972684)
  AUTHORS   Kong,N., Davis,M., Arabyan,N., Thao,K., Ng,W., Huang,B.C., Chen,P.,
            Weis,A.M., Chin,N., Foutouhi,S., Foutouhi,A., Storey,D., Xie,Y.,
            Kaufman,J. and Weimer,B.C.
  TITLE     Salmonella 100K Pathogen Genome Project
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4972684)
  AUTHORS   Kong,N., Davis,M., Arabyan,N., Thao,K., Ng,W., Huang,B.C., Chen,P.,
            Weis,A.M., Chin,N., Foutouhi,S., Foutouhi,A., Storey,D., Xie,Y.,
            Kaufman,J. and Weimer,B.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAR-2017) VM: PHR, UC Davis, 1089 Veterinary Medicine
            Dr, VM3B Rm 4016, Davis, CA 95616, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MYYU00000000.1.
            The Salmonella enterica subsp. enterica serovar Kintambo whole
            genome shotgun (WGS) project has the project accession
            NZ_MYYU00000000.  This version of the project (01) has the
            accession number NZ_MYYU01000000, and consists of sequences
            MYYU01000001-MYYU01000106.
            Bacteria available from Dr. Bart C. Weimer.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 105x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002045995.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:11:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,879
            CDSs (total)                      :: 4,772
            Genes (coding)                    :: 4,595
            CDSs (with protein)               :: 4,595
            Genes (RNA)                       :: 107
            rRNAs                             :: 7, 1, 11 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 16S)
            partial rRNAs                     :: 3, 11 (5S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 177
            CDSs (without protein)            :: 177
            Pseudo Genes (ambiguous residues) :: 0 of 177
            Pseudo Genes (frameshifted)       :: 62 of 177
            Pseudo Genes (incomplete)         :: 132 of 177
            Pseudo Genes (internal stop)      :: 22 of 177
            Pseudo Genes (multiple problems)  :: 33 of 177
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4972684
                     /organism="Salmonella enterica subsp. enterica serovar
                     Kintambo"
                     /mol_type="genomic DNA"
                     /strain="2010K-2376"
                     /serovar="Kintambo"
                     /sub_species="enterica"
                     /db_xref="taxon:1192730"
                     /collected_by="CDC"
WGS         MYYU01000001-MYYU01000106
WGS_SCAFLD  NZ_MYYU01000001-NZ_MYYU01000106
//
LOCUS       NZ_MVPP01000000      5154750 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Typhimurium strain
            GMR-S-356.16, whole genome shotgun sequencing project.
ACCESSION   NZ_MVPP00000000
VERSION     NZ_MVPP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05792027
            Assembly: GCF_002283535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Typhimurium (Salmonella
            typhimurium)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhimurium
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5154750)
  AUTHORS   Saavedra,S.Y., Diaz,L., Wiesner,M., Correa,A., Arevalo,S.A.,
            Reyes,J., Hidalgo,A.M., De La Cadena,E., Perenguez,M.,
            Montano,L.A., Ardila,J., Rios,R., Ovalle,M.V., Diaz,P., Porras,P.,
            Villegas,M.V., Arias,C.A., Castaneda,E. and Duarte,C.
  TITLE     Genomic and Molecular Characterization of Clinical Isolates of
            Enterobacteriaceae Harboring mcr-1 in Colombia, 2002-2016
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5154750)
  AUTHORS   Arias,C.A., Diaz,L. and Rios,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2017) International Center for Microbial
            Genomics, Universidad El Bosque, Av Cra 9 No. 131 A - 02, Bogota
            110121, Colombia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MVPP00000000.1.
            The Salmonella enterica subsp. enterica serovar Typhimurium whole
            genome shotgun (WGS) project has the project accession
            NZ_MVPP00000000.  This version of the project (01) has the
            accession number NZ_MVPP01000000, and consists of sequences
            MVPP01000001-MVPP01000160.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC Genomics Workbench v. 8.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 201x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002283535.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:01:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,173
            CDSs (total)                      :: 5,066
            Genes (coding)                    :: 4,920
            CDSs (with protein)               :: 4,920
            Genes (RNA)                       :: 107
            rRNAs                             :: 3, 1, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 9 (23S)
            tRNAs                             :: 79
            ncRNAs                            :: 15
            Pseudo Genes (total)              :: 146
            CDSs (without protein)            :: 146
            Pseudo Genes (ambiguous residues) :: 0 of 146
            Pseudo Genes (frameshifted)       :: 37 of 146
            Pseudo Genes (incomplete)         :: 121 of 146
            Pseudo Genes (internal stop)      :: 18 of 146
            Pseudo Genes (multiple problems)  :: 28 of 146
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5154750
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhimurium"
                     /mol_type="genomic DNA"
                     /strain="GMR-S-356.16"
                     /serovar="Typhimurium"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90371"
                     /geo_loc_name="Colombia: Boyaca"
                     /lat_lon="5.6279 N 72.8269 W"
                     /collection_date="2016"
                     /collected_by="Microbiology Group - National Institute of
                     Health - Colombia"
                     /genotype="ST 34"
WGS         MVPP01000001-MVPP01000160
WGS_SCAFLD  NZ_MVPP01000001-NZ_MVPP01000160
//
LOCUS       NZ_JBJLKQ010000000   2819088 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Staphylococcus aureus strain 16C12, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLKQ000000000
VERSION     NZ_JBJLKQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45053743
            Assembly: GCF_045566255.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2819088)
  AUTHORS   Cherbuin,J., Save,J., Oswald,E. and Resch,G.
  TITLE     Resistance to Podovirus occurs in vivo through tarS mutation during
            phage/antibiotic treatment of experimental methicillin-susceptible
            Staphylococcus aureus (MSSA) infective endocarditis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2819088)
  AUTHORS   Cherbuin,J., Save,J., Oswald,E. and Resch,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Center for Research and Innovation in
            Clinical Pharmaceutical Sciences, Lausanne University Hospital,
            Avenue de Beaumont- PAV4, Lausanne, Vaud 1011, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLKQ000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBJLKQ000000000.  This version of the
            project (01) has the accession number NZ_JBJLKQ010000000, and
            consists of sequences JBJLKQ010000001-JBJLKQ010000025.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 02-AUG-2021
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 572.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045566255.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:21:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,841
            CDSs (total)                      :: 2,783
            Genes (coding)                    :: 2,709
            CDSs (with protein)               :: 2,709
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 74
            CDSs (without protein)            :: 74
            Pseudo Genes (ambiguous residues) :: 0 of 74
            Pseudo Genes (frameshifted)       :: 36 of 74
            Pseudo Genes (incomplete)         :: 39 of 74
            Pseudo Genes (internal stop)      :: 12 of 74
            Pseudo Genes (multiple problems)  :: 13 of 74
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2819088
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="16C12"
                     /isolation_source="cardiac vegetation"
                     /host="Rattus norvegicus"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Switzerland"
                     /collection_date="2021"
WGS         JBJLKQ010000001-JBJLKQ010000025
WGS_SCAFLD  NZ_JBJLKQ010000001-NZ_JBJLKQ010000025
//
LOCUS       NZ_JBKAEO010000000   4613521 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella sp. mbs1, whole genome shotgun sequencing project.
ACCESSION   NZ_JBKAEO000000000
VERSION     NZ_JBKAEO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44807619
            Assembly: GCF_056171915.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella sp. mbs1
  ORGANISM  Salmonella sp. mbs1
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4613521)
  AUTHORS   Bhowmik,M., Bala,A., Bhowmik,T., Chowdhury,M., Dutta,A. and
            Biswas,P.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-DEC-2024) Department of Microbiology and Veterinary
            Public health, Chattogram Veterinary And Animal Sciences
            University, Zakir Hossain Road, Chattogram 4225, Bangladesh
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBKAEO000000000.1.
            The Salmonella sp. mbs1 whole genome shotgun (WGS) project has the
            project accession NZ_JBKAEO000000000.  This version of the project
            (01) has the accession number NZ_JBKAEO010000000, and consists of
            sequences JBKAEO010000001-JBKAEO010000069.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 12-NOV-2024
            Assembly Method        :: SPAdes v. NOV-2024
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056171915.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:41:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,474
            CDSs (total)                      :: 4,382
            Genes (coding)                    :: 4,259
            CDSs (with protein)               :: 4,259
            Genes (RNA)                       :: 92
            rRNAs                             :: 1, 5 (16S, 23S)
            partial rRNAs                     :: 1, 5 (16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 16
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 48 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 31 of 123
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4613521
                     /organism="Salmonella sp. mbs1"
                     /mol_type="genomic DNA"
                     /strain="mbs1"
                     /isolation_source="Floor Litter"
                     /db_xref="taxon:3382019"
                     /geo_loc_name="Bangladesh: Chattogram"
                     /collection_date="2023-01-15"
                     /collected_by="Mrinmoy Bhowmik"
WGS         JBKAEO010000001-JBKAEO010000069
WGS_SCAFLD  NZ_JBKAEO010000001-NZ_JBKAEO010000069
//
LOCUS       NZ_JBKAEP010000000   4627376 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella sp. mbs2, whole genome shotgun sequencing project.
ACCESSION   NZ_JBKAEP000000000
VERSION     NZ_JBKAEP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44807620
            Assembly: GCF_056171895.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella sp. mbs2
  ORGANISM  Salmonella sp. mbs2
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4627376)
  AUTHORS   Bhowmik,M., Bala,A., Bhowmik,T., Chowdhury,M., Dutta,A. and
            Biswas,P.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-DEC-2024) Department of Microbiology and Veterinary
            Public health, Chattogram Veterinary And Animal Sciences
            University, Zakir Hossain Road, Chattogram 4225, Bangladesh
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBKAEP000000000.1.
            The Salmonella sp. mbs2 whole genome shotgun (WGS) project has the
            project accession NZ_JBKAEP000000000.  This version of the project
            (01) has the accession number NZ_JBKAEP010000000, and consists of
            sequences JBKAEP010000001-JBKAEP010000062.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 12-NOV-2024
            Assembly Method        :: SPAdes v. NOV-2024
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 67x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056171895.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:44:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,497
            CDSs (total)                      :: 4,426
            Genes (coding)                    :: 4,286
            CDSs (with protein)               :: 4,286
            Genes (RNA)                       :: 71
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 55
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 140
            CDSs (without protein)            :: 140
            Pseudo Genes (ambiguous residues) :: 0 of 140
            Pseudo Genes (frameshifted)       :: 57 of 140
            Pseudo Genes (incomplete)         :: 101 of 140
            Pseudo Genes (internal stop)      :: 24 of 140
            Pseudo Genes (multiple problems)  :: 36 of 140
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4627376
                     /organism="Salmonella sp. mbs2"
                     /mol_type="genomic DNA"
                     /strain="mbs2"
                     /isolation_source="Floor Litter"
                     /db_xref="taxon:3382020"
                     /geo_loc_name="Bangladesh: Chattogram"
                     /collection_date="2022-09-15"
                     /collected_by="Mrinmoy Bhowmik"
WGS         JBKAEP010000001-JBKAEP010000062
WGS_SCAFLD  NZ_JBKAEP010000001-NZ_JBKAEP010000062
//
LOCUS       NZ_SDVA01000000      3550960 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Serinicoccus sediminis strain GP-T3-3, whole genome shotgun
            sequencing project.
ACCESSION   NZ_SDVA00000000
VERSION     NZ_SDVA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10824318
            Assembly: GCF_004153545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Serinicoccus sediminis
  ORGANISM  Serinicoccus sediminis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Serinicoccus.
REFERENCE   1  (bases 1 to 3550960)
  AUTHORS   Lee,D.W., Kim,J.-J. and Kim,B.S.
  TITLE     Serinicoccus sediminis sp. nov., isolated from tidal flat
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3550960)
  AUTHORS   Lee,D.W., Kim,J.-J. and Kim,B.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-JAN-2019) Division of Environmental Science &
            Ecological Engineering, Korea University, 145 Anam-ro, Seongbuk-gu,
            Seoul 02841, Republic of Korea
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SDVA00000000.1.
            The Serinicoccus sediminis whole genome shotgun (WGS) project has
            the project accession NZ_SDVA00000000.  This version of the project
            (01) has the accession number NZ_SDVA01000000, and consists of
            sequences SDVA01000001-SDVA01000104.
            Bacteria and source DNA available from Beom Seok Kim, Korea
            University.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.10.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 310.7x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004153545.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:02:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,313
            CDSs (total)                      :: 3,259
            Genes (coding)                    :: 3,237
            CDSs (with protein)               :: 3,237
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 5 of 22
            Pseudo Genes (incomplete)         :: 21 of 22
            Pseudo Genes (internal stop)      :: 0 of 22
            Pseudo Genes (multiple problems)  :: 4 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3550960
                     /organism="Serinicoccus sediminis"
                     /mol_type="genomic DNA"
                     /strain="GP-T3-3"
                     /isolation_source="sea-tidal flat sediment"
                     /type_material="type strain of Serinicoccus sediminis"
                     /db_xref="taxon:2306021"
                     /geo_loc_name="South Korea: Gopado"
                     /collection_date="2016-09-29"
WGS         SDVA01000001-SDVA01000104
WGS_SCAFLD  NZ_SDVA01000001-NZ_SDVA01000104
//
LOCUS       NZ_MWMR01000000      4928930 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Weltevreden strain
            CNGD2015003, whole genome shotgun sequencing project.
ACCESSION   NZ_MWMR00000000
VERSION     NZ_MWMR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06339605
            Assembly: GCF_002999735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Weltevreden
  ORGANISM  Salmonella enterica subsp. enterica serovar Weltevreden
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4928930)
  AUTHORS   Li,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-FEB-2017) Microbiology, Guangdong CDC, #160 Qunxuan,
            Dashi, Guangzhou 511430, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MWMR00000000.1.
            The Salmonella enterica subsp. enterica serovar Weltevreden whole
            genome shotgun (WGS) project has the project accession
            NZ_MWMR00000000.  This version of the project (01) has the
            accession number NZ_MWMR01000000, and consists of sequences
            MWMR01000001-MWMR01000068.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SOAPdenovo v. DEC-2016
            Genome Coverage       :: 100.0x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002999735.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:54:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,824
            CDSs (total)                      :: 4,720
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 104
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 159
            CDSs (without protein)            :: 159
            Pseudo Genes (ambiguous residues) :: 0 of 159
            Pseudo Genes (frameshifted)       :: 66 of 159
            Pseudo Genes (incomplete)         :: 112 of 159
            Pseudo Genes (internal stop)      :: 18 of 159
            Pseudo Genes (multiple problems)  :: 34 of 159
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4928930
                     /organism="Salmonella enterica subsp. enterica serovar
                     Weltevreden"
                     /mol_type="genomic DNA"
                     /strain="CNGD2015003"
                     /serovar="Weltevreden"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:57743"
                     /geo_loc_name="China: Guangdong"
                     /lat_lon="23.1 N 113.19 E"
                     /collection_date="2015-05-01"
                     /collected_by="Baisheng Li"
WGS         MWMR01000001-MWMR01000068
WGS_SCAFLD  NZ_MWMR01000001-NZ_MWMR01000068
//
LOCUS       NZ_JAZDBD010000000   2506227 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Staphylococcus capitis strain PJI13, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAZDBD000000000
VERSION     NZ_JAZDBD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39504581
            Assembly: GCF_037417435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus capitis
  ORGANISM  Staphylococcus capitis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2506227)
  AUTHORS   Burton,N., Melo,L.D.R., Pearce,B., Tadesse,M.D., Vryonis,E. and
            Sagona,A.
  TITLE     Isolation and Characterisation of Novel Lytic Bacteriophages for
            therapeutic applications in Prosthetic Joint Infections
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2506227)
  AUTHORS   Burton,N., Melo,L.D.R., Pearce,B., Tadesse,M.D., Vryonis,E. and
            Sagona,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-JAN-2024) Centre of Biological Engineering,
            University of Minho, Campus de Gualtar, Braga 4710-057, Portugal
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAZDBD000000000.1.
            The Staphylococcus capitis whole genome shotgun (WGS) project has
            the project accession NZ_JAZDBD000000000.  This version of the
            project (01) has the accession number NZ_JAZDBD010000000, and
            consists of sequences JAZDBD010000001-JAZDBD010000030.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 116x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037417435.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:46:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,468
            CDSs (total)                      :: 2,382
            Genes (coding)                    :: 2,338
            CDSs (with protein)               :: 2,338
            Genes (RNA)                       :: 86
            rRNAs                             :: 8, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 1 (5S, 16S)
            partial rRNAs                     :: 4, 5 (16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 44
            CDSs (without protein)            :: 44
            Pseudo Genes (ambiguous residues) :: 0 of 44
            Pseudo Genes (frameshifted)       :: 13 of 44
            Pseudo Genes (incomplete)         :: 26 of 44
            Pseudo Genes (internal stop)      :: 13 of 44
            Pseudo Genes (multiple problems)  :: 8 of 44
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2506227
                     /organism="Staphylococcus capitis"
                     /mol_type="genomic DNA"
                     /strain="PJI13"
                     /isolation_source="Prosthetic Joint Infections"
                     /host="Homo sapiens"
                     /db_xref="taxon:29388"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2020-12-07"
WGS         JAZDBD010000001-JAZDBD010000030
WGS_SCAFLD  NZ_JAZDBD010000001-NZ_JAZDBD010000030
//
LOCUS       NZ_JBJLKP010000000   2818560 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Staphylococcus aureus strain 16C02, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLKP000000000
VERSION     NZ_JBJLKP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45053739
            Assembly: GCF_045566305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2818560)
  AUTHORS   Cherbuin,J., Save,J., Oswald,E. and Resch,G.
  TITLE     Resistance to Podovirus occurs in vivo through tarS mutation during
            phage/antibiotic treatment of experimental methicillin-susceptible
            Staphylococcus aureus (MSSA) infective endocarditis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2818560)
  AUTHORS   Cherbuin,J., Save,J., Oswald,E. and Resch,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-NOV-2024) Center for Research and Innovation in
            Clinical Pharmaceutical Sciences, Lausanne University Hospital,
            Avenue de Beaumont- PAV4, Lausanne, Vaud 1011, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLKP000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBJLKP000000000.  This version of the
            project (01) has the accession number NZ_JBJLKP010000000, and
            consists of sequences JBJLKP010000001-JBJLKP010000028.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 02-AUG-2021
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 572.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045566305.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:24:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,843
            CDSs (total)                      :: 2,785
            Genes (coding)                    :: 2,708
            CDSs (with protein)               :: 2,708
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 36 of 77
            Pseudo Genes (incomplete)         :: 43 of 77
            Pseudo Genes (internal stop)      :: 11 of 77
            Pseudo Genes (multiple problems)  :: 13 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2818560
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="16C02"
                     /isolation_source="cardiac vegetation"
                     /host="Rattus norvegicus"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Switzerland"
                     /collection_date="2021"
WGS         JBJLKP010000001-JBJLKP010000028
WGS_SCAFLD  NZ_JBJLKP010000001-NZ_JBJLKP010000028
//
LOCUS       NZ_MWNC01000000      4992608 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Weltevreden strain
            CNGD2015015, whole genome shotgun sequencing project.
ACCESSION   NZ_MWNC00000000
VERSION     NZ_MWNC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06339616
            Assembly: GCF_002999935.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Weltevreden
  ORGANISM  Salmonella enterica subsp. enterica serovar Weltevreden
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4992608)
  AUTHORS   Li,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-FEB-2017) Microbiology, Guangdong CDC, #160 Qunxuan,
            Dashi, Guangzhou 511430, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MWNC00000000.1.
            The Salmonella enterica subsp. enterica serovar Weltevreden whole
            genome shotgun (WGS) project has the project accession
            NZ_MWNC00000000.  This version of the project (01) has the
            accession number NZ_MWNC01000000, and consists of sequences
            MWNC01000001-MWNC01000071.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SOAPdenovo v. DEC-2016
            Genome Coverage       :: 100.0x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002999935.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:06:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,925
            CDSs (total)                      :: 4,818
            Genes (coding)                    :: 4,633
            CDSs (with protein)               :: 4,633
            Genes (RNA)                       :: 107
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 185
            CDSs (without protein)            :: 185
            Pseudo Genes (ambiguous residues) :: 0 of 185
            Pseudo Genes (frameshifted)       :: 77 of 185
            Pseudo Genes (incomplete)         :: 132 of 185
            Pseudo Genes (internal stop)      :: 21 of 185
            Pseudo Genes (multiple problems)  :: 41 of 185
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4992608
                     /organism="Salmonella enterica subsp. enterica serovar
                     Weltevreden"
                     /mol_type="genomic DNA"
                     /strain="CNGD2015015"
                     /serovar="Weltevreden"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:57743"
                     /geo_loc_name="China: Guangdong"
                     /lat_lon="23.1 N 113.19 E"
                     /collection_date="2015-09-09"
                     /collected_by="Baisheng Li"
WGS         MWNC01000001-MWNC01000071
WGS_SCAFLD  NZ_MWNC01000001-NZ_MWNC01000071
//
LOCUS       NZ_QDNM01000000      4610637 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Rubislaw strain 187,
            whole genome shotgun sequencing project.
ACCESSION   NZ_QDNM00000000
VERSION     NZ_QDNM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08514401
            Assembly: GCF_003118215.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Rubislaw
  ORGANISM  Salmonella enterica subsp. enterica serovar Rubislaw
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4610637)
  AUTHORS   Leon,I.M., Lawhon,S.D., Norman,K.N., Threadgill,D.S., Ohta,N.,
            Vinasco,J. and Scott,H.M.
  TITLE     Serotype diversity and antimicrobial resistance among Salmonella
            enterica isolated from patients at an equine referral hospital
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4610637)
  AUTHORS   Leon,I.M., Lawhon,S.D., Norman,K.N., Threadgill,D.S., Ohta,N.,
            Vinasco,J. and Scott,H.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-APR-2018) Veterinary Integrative Biosciences, Texas
            A&M University, 4458 TAMU, College Station, TX 77843, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QDNM00000000.1.
            The Salmonella enterica subsp. enterica serovar Rubislaw whole
            genome shotgun (WGS) project has the project accession
            NZ_QDNM00000000.  This version of the project (01) has the
            accession number NZ_QDNM01000000, and consists of sequences
            QDNM01000001-QDNM01000083.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.10.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 70x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003118215.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:10:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,539
            CDSs (total)                      :: 4,429
            Genes (coding)                    :: 4,276
            CDSs (with protein)               :: 4,276
            Genes (RNA)                       :: 110
            rRNAs                             :: 7, 3, 11 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1 (5S, 16S)
            partial rRNAs                     :: 2, 11 (16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 153
            CDSs (without protein)            :: 153
            Pseudo Genes (ambiguous residues) :: 0 of 153
            Pseudo Genes (frameshifted)       :: 58 of 153
            Pseudo Genes (incomplete)         :: 114 of 153
            Pseudo Genes (internal stop)      :: 23 of 153
            Pseudo Genes (multiple problems)  :: 37 of 153
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4610637
                     /organism="Salmonella enterica subsp. enterica serovar
                     Rubislaw"
                     /mol_type="genomic DNA"
                     /strain="187"
                     /serovar="Rubislaw"
                     /isolation_source="feces"
                     /host="Equus ferus caballus"
                     /sub_species="enterica"
                     /db_xref="taxon:598"
                     /geo_loc_name="USA: Texas"
                     /lat_lon="30.61 N 96.35 W"
                     /collection_date="2012"
                     /collected_by="Texas A&M University"
WGS         QDNM01000001-QDNM01000083
WGS_SCAFLD  NZ_QDNM01000001-NZ_QDNM01000083
//
LOCUS       NZ_BDVK01000000      2718485 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Staphylococcus aureus strain M1C058, whole genome shotgun
            sequencing project.
ACCESSION   NZ_BDVK00000000
VERSION     NZ_BDVK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMD00083464
            Assembly: GCF_003417955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1
  AUTHORS   Nakamura,Y., Takahashi,H., Takaya,A., Inoue,Y., Katayama,Y.,
            Kusuya,Y., Shoji,T., Takada,S., Nakagawa,S., Oguma,R., Ozawa,N.,
            Yamaide,F., Suzuki,S., Villaruz,A., Otto,M., Matsue,H., Nunez,G.
            and Shimojo,N.
  TITLE     Protection against atopic dermatitis through acquisition of
            Staphylococcus quorum-sensing agr mutations in the skin
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2718485)
  AUTHORS   Nakamura,Y., Takahashi,H., Takaya,A., Inoue,Y., Katayama,Y.,
            Kusuya,Y., Shoji,T., Takada,S., Nakagawa,S., Oguma,R., Ozawa,N.,
            Yamaide,F., Suzuki,S., Villaruz,A., Otto,M., Matsue,H., Nunez,G.
            and Shimojo,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-AUG-2017) Contact:Hiroki Takahashi Chiba University,
            Medical Mycology Research Center; Inohana 1-8-1, Chiba, Chiba
            260-8673, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            BDVK00000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_BDVK00000000.  This version of the project
            (01) has the accession number NZ_BDVK01000000, and consists of
            sequences BDVK01000001-BDVK01000036.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SPAdes v. 3.11.1
            Genome Coverage       :: 205x
            Sequencing Technology :: MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003417955.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:58:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,728
            CDSs (total)                      :: 2,644
            Genes (coding)                    :: 2,536
            CDSs (with protein)               :: 2,536
            Genes (RNA)                       :: 84
            rRNAs                             :: 7, 9, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1 (5S, 23S)
            partial rRNAs                     :: 9, 4 (16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 48 of 108
            Pseudo Genes (incomplete)         :: 53 of 108
            Pseudo Genes (internal stop)      :: 22 of 108
            Pseudo Genes (multiple problems)  :: 14 of 108
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2718485
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="M1C058"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
WGS         BDVK01000001-BDVK01000036
WGS_SCAFLD  NZ_BDVK01000001-NZ_BDVK01000036
//
LOCUS       NZ_MZCA01000000      4838336 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Worthington strain
            2012K-1221, whole genome shotgun sequencing project.
ACCESSION   NZ_MZCA00000000
VERSION     NZ_MZCA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03265077
            Assembly: GCF_002046885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Worthington
  ORGANISM  Salmonella enterica subsp. enterica serovar Worthington
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4838336)
  AUTHORS   Kong,N., Davis,M., Arabyan,N., Thao,K., Ng,W., Huang,B.C., Chen,P.,
            Weis,A.M., Chin,N., Foutouhi,S., Foutouhi,A., Storey,D., Xie,Y.,
            Kaufman,J. and Weimer,B.C.
  TITLE     Salmonella 100K Pathogen Genome Project
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4838336)
  AUTHORS   Kong,N., Davis,M., Arabyan,N., Thao,K., Ng,W., Huang,B.C., Chen,P.,
            Weis,A.M., Chin,N., Foutouhi,S., Foutouhi,A., Storey,D., Xie,Y.,
            Kaufman,J. and Weimer,B.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAR-2017) VM: PHR, UC Davis, 1089 Veterinary Medicine
            Dr, VM3B Rm 4016, Davis, CA 95616, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MZCA00000000.1.
            The Salmonella enterica subsp. enterica serovar Worthington whole
            genome shotgun (WGS) project has the project accession
            NZ_MZCA00000000.  This version of the project (01) has the
            accession number NZ_MZCA01000000, and consists of sequences
            MZCA01000001-MZCA01001371.
            Bacteria available from Dr. Bart C. Weimer.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 72x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002046885.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:17:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,775
            CDSs (total)                      :: 5,688
            Genes (coding)                    :: 5,071
            CDSs (with protein)               :: 5,071
            Genes (RNA)                       :: 87
            rRNAs                             :: 5, 1, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1 (5S, 16S)
            partial rRNAs                     :: 5 (23S)
            tRNAs                             :: 64
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 617
            CDSs (without protein)            :: 617
            Pseudo Genes (ambiguous residues) :: 0 of 617
            Pseudo Genes (frameshifted)       :: 52 of 617
            Pseudo Genes (incomplete)         :: 564 of 617
            Pseudo Genes (internal stop)      :: 35 of 617
            Pseudo Genes (multiple problems)  :: 33 of 617
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4838336
                     /organism="Salmonella enterica subsp. enterica serovar
                     Worthington"
                     /mol_type="genomic DNA"
                     /strain="2012K-1221"
                     /serovar="Worthington"
                     /sub_species="enterica"
                     /db_xref="taxon:1160769"
                     /collected_by="CDC"
WGS         MZCA01000001-MZCA01001371
WGS_SCAFLD  NZ_MZCA01000001-NZ_MZCA01001371
//
LOCUS       NZ_QATE01000000      4886214 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Saintpaul strain
            sg_w11, whole genome shotgun sequencing project.
ACCESSION   NZ_QATE00000000
VERSION     NZ_QATE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08848589
            Assembly: GCF_004291535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Saintpaul
  ORGANISM  Salmonella enterica subsp. enterica serovar Saintpaul
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4886214)
  AUTHORS   Kohli,G.S., Zwe,Y.H., Ding,Y., Givskov,M. and Liang,Y.
  TITLE     Comparative genomic analysis of various Salmonella enterica
            serotypes in Singapore
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4886214)
  AUTHORS   Kohli,G.S., Zwe,Y.H., Ding,Y., Givskov,M. and Liang,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-APR-2018) Cluster 4, SCELSE, Nanyang Technological
            University, Singapore, 60 Nanyang Drive, SBS-01N-27, Singapore,
            Singapore 637551, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QATE00000000.1.
            The Salmonella enterica subsp. enterica serovar Saintpaul whole
            genome shotgun (WGS) project has the project accession
            NZ_QATE00000000.  This version of the project (01) has the
            accession number NZ_QATE01000000, and consists of sequences
            QATE01000001-QATE01000067.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 541x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004291535.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:11:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,830
            CDSs (total)                      :: 4,693
            Genes (coding)                    :: 4,570
            CDSs (with protein)               :: 4,570
            Genes (RNA)                       :: 137
            rRNAs                             :: 12, 7, 20 (5S, 16S, 23S)
            complete rRNAs                    :: 5 (5S)
            partial rRNAs                     :: 7, 7, 20 (5S, 16S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 16
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 35 of 123
            Pseudo Genes (incomplete)         :: 102 of 123
            Pseudo Genes (internal stop)      :: 17 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4886214
                     /organism="Salmonella enterica subsp. enterica serovar
                     Saintpaul"
                     /mol_type="genomic DNA"
                     /strain="sg_w11"
                     /serovar="Saintpaul"
                     /isolation_source="supermarket"
                     /sub_species="enterica"
                     /db_xref="taxon:90105"
                     /geo_loc_name="Singapore"
                     /lat_lon="1.3521 N 103.8198 E"
                     /collection_date="2016"
                     /collected_by="Ye Htut Zwe"
WGS         QATE01000001-QATE01000067
WGS_SCAFLD  NZ_QATE01000001-NZ_QATE01000067
//
LOCUS       NZ_QATD01000000      4895216 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Saintpaul strain
            sg_wd21, whole genome shotgun sequencing project.
ACCESSION   NZ_QATD00000000
VERSION     NZ_QATD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08848590
            Assembly: GCF_004291925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Saintpaul
  ORGANISM  Salmonella enterica subsp. enterica serovar Saintpaul
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4895216)
  AUTHORS   Kohli,G.S., Zwe,Y.H., Ding,Y., Givskov,M. and Liang,Y.
  TITLE     Comparative genomic analysis of various Salmonella enterica
            serotypes in Singapore
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4895216)
  AUTHORS   Kohli,G.S., Zwe,Y.H., Ding,Y., Givskov,M. and Liang,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-APR-2018) Cluster 4, SCELSE, Nanyang Technological
            University, Singapore, 60 Nanyang Drive, SBS-01N-27, Singapore,
            Singapore 637551, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QATD00000000.1.
            The Salmonella enterica subsp. enterica serovar Saintpaul whole
            genome shotgun (WGS) project has the project accession
            NZ_QATD00000000.  This version of the project (01) has the
            accession number NZ_QATD01000000, and consists of sequences
            QATD01000001-QATD01000123.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 418x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004291925.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:08:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,872
            CDSs (total)                      :: 4,729
            Genes (coding)                    :: 4,588
            CDSs (with protein)               :: 4,588
            Genes (RNA)                       :: 143
            rRNAs                             :: 12, 7, 26 (5S, 16S, 23S)
            complete rRNAs                    :: 5 (5S)
            partial rRNAs                     :: 7, 7, 26 (5S, 16S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 16
            Pseudo Genes (total)              :: 141
            CDSs (without protein)            :: 141
            Pseudo Genes (ambiguous residues) :: 0 of 141
            Pseudo Genes (frameshifted)       :: 37 of 141
            Pseudo Genes (incomplete)         :: 117 of 141
            Pseudo Genes (internal stop)      :: 18 of 141
            Pseudo Genes (multiple problems)  :: 29 of 141
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4895216
                     /organism="Salmonella enterica subsp. enterica serovar
                     Saintpaul"
                     /mol_type="genomic DNA"
                     /strain="sg_wd21"
                     /serovar="Saintpaul"
                     /isolation_source="wet market"
                     /sub_species="enterica"
                     /db_xref="taxon:90105"
                     /geo_loc_name="Singapore"
                     /lat_lon="1.3521 N 103.8198 E"
                     /collection_date="2016"
                     /collected_by="Ye Htut Zwe"
WGS         QATD01000001-QATD01000123
WGS_SCAFLD  NZ_QATD01000001-NZ_QATD01000123
//
LOCUS       NZ_JARALD010000000   5015931 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Typhimurium strain
            12-164NL, whole genome shotgun sequencing project.
ACCESSION   NZ_JARALD000000000
VERSION     NZ_JARALD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN33222178
            Assembly: GCF_036959045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Typhimurium (Salmonella
            typhimurium)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhimurium
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5015931)
  AUTHORS   Nguyen,T.Q., Polev,D.E., Saitova,A.T., Makarova,M.A.,
            Matveeva,Z.N., Nguyen,V.H., Tran,P.T., Tran,L.T., Vo,T.K.,
            Nguyen,L.T., Nguyen,T.L., Nguyen,L.T., Egorova,S.A. and
            Kaftyreva,L.A.
  TITLE     Antimicrobial resistance mechanisms of Salmonella isolated in
            people and food items in South Vietnam
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5015931)
  AUTHORS   Nguyen,T.Q., Polev,D.E., Saitova,A.T., Makarova,M.A.,
            Matveeva,Z.N., Nguyen,V.H., Tran,P.T., Tran,L.T., Vo,T.K.,
            Nguyen,L.T., Nguyen,T.L., Nguyen,L.T., Egorova,S.A. and
            Kaftyreva,L.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-FEB-2023) Metagenomics research group,
            Saint-Petersburg Pasteur Institute, Mira, 14, Saint-Petersburg
            197101, Russia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARALD000000000.1.
            The Salmonella enterica subsp. enterica serovar Typhimurium whole
            genome shotgun (WGS) project has the project accession
            NZ_JARALD000000000.  This version of the project (01) has the
            accession number NZ_JARALD010000000, and consists of sequences
            JARALD010000001-JARALD010000087.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 20-DEC-2022
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 81x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_036959045.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:45:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,962
            CDSs (total)                      :: 4,824
            Genes (coding)                    :: 4,687
            CDSs (with protein)               :: 4,687
            Genes (RNA)                       :: 138
            rRNAs                             :: 12, 9, 21 (5S, 16S, 23S)
            complete rRNAs                    :: 7 (5S)
            partial rRNAs                     :: 5, 9, 21 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 15
            Pseudo Genes (total)              :: 137
            CDSs (without protein)            :: 137
            Pseudo Genes (ambiguous residues) :: 0 of 137
            Pseudo Genes (frameshifted)       :: 41 of 137
            Pseudo Genes (incomplete)         :: 107 of 137
            Pseudo Genes (internal stop)      :: 20 of 137
            Pseudo Genes (multiple problems)  :: 29 of 137
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5015931
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhimurium"
                     /mol_type="genomic DNA"
                     /strain="12-164NL"
                     /serovar="Typhimurium"
                     /isolation_source="swine fecal"
                     /host="swine"
                     /sub_species="enterica"
                     /db_xref="taxon:90371"
                     /geo_loc_name="Viet Nam: Dong Nai, Livestock farm in Thong
                     Nhat"
                     /lat_lon="11.0195 N 107.1946 E"
                     /collection_date="2012-05-28"
                     /collected_by="Pasteur institute of Ho Chi Minh city, Viet
                     Nam"
WGS         JARALD010000001-JARALD010000087
WGS_SCAFLD  NZ_JARALD010000001-NZ_JARALD010000087
//
LOCUS       NZ_QATK01000000      4868875 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Saintpaul strain sg_d7,
            whole genome shotgun sequencing project.
ACCESSION   NZ_QATK00000000
VERSION     NZ_QATK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08848583
            Assembly: GCF_004291505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Saintpaul
  ORGANISM  Salmonella enterica subsp. enterica serovar Saintpaul
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4868875)
  AUTHORS   Kohli,G.S., Zwe,Y.H., Ding,Y., Givskov,M. and Liang,Y.
  TITLE     Comparative genomic analysis of various Salmonella enterica
            serotypes in Singapore
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4868875)
  AUTHORS   Kohli,G.S., Zwe,Y.H., Ding,Y., Givskov,M. and Liang,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-APR-2018) Cluster 4, SCELSE, Nanyang Technological
            University, Singapore, 60 Nanyang Drive, SBS-01N-27, Singapore,
            Singapore 637551, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QATK00000000.1.
            The Salmonella enterica subsp. enterica serovar Saintpaul whole
            genome shotgun (WGS) project has the project accession
            NZ_QATK00000000.  This version of the project (01) has the
            accession number NZ_QATK01000000, and consists of sequences
            QATK01000001-QATK01000048.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 404x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004291505.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:06:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,802
            CDSs (total)                      :: 4,671
            Genes (coding)                    :: 4,559
            CDSs (with protein)               :: 4,559
            Genes (RNA)                       :: 131
            rRNAs                             :: 8, 8, 18 (5S, 16S, 23S)
            complete rRNAs                    :: 8 (5S)
            partial rRNAs                     :: 8, 18 (16S, 23S)
            tRNAs                             :: 80
            ncRNAs                            :: 17
            Pseudo Genes (total)              :: 112
            CDSs (without protein)            :: 112
            Pseudo Genes (ambiguous residues) :: 0 of 112
            Pseudo Genes (frameshifted)       :: 35 of 112
            Pseudo Genes (incomplete)         :: 91 of 112
            Pseudo Genes (internal stop)      :: 17 of 112
            Pseudo Genes (multiple problems)  :: 28 of 112
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4868875
                     /organism="Salmonella enterica subsp. enterica serovar
                     Saintpaul"
                     /mol_type="genomic DNA"
                     /strain="sg_d7"
                     /serovar="Saintpaul"
                     /isolation_source="supermarket"
                     /sub_species="enterica"
                     /db_xref="taxon:90105"
                     /geo_loc_name="Singapore"
                     /lat_lon="1.3521 N 103.8198 E"
                     /collection_date="2016"
                     /collected_by="Ye Htut Zwe"
WGS         QATK01000001-QATK01000048
WGS_SCAFLD  NZ_QATK01000001-NZ_QATK01000048
//
LOCUS       NZ_LHTH01000000      4796858 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. salamae serovar 56:z10:e,n,x str.
            1369-73, whole genome shotgun sequencing project.
ACCESSION   NZ_LHTH00000000
VERSION     NZ_LHTH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03470772
            Assembly: GCF_001448865.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. salamae serovar 56:z10:e,n,x str.
            1369-73
  ORGANISM  Salmonella enterica subsp. salamae serovar 56:z10:e,n,x str.
            1369-73
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4796858)
  AUTHORS   Yoshida,C., Brumwell,S.L., Lingohr,E.J., Ahmad,A., Blimkie,T.M.,
            Kogan,B.A., Pilsworth,J., Rehman,M.A., Schleicher,K.L.,
            Shanmugaraj,J., Kropinski,A.M. and Nash,J.H.
  TITLE     Draft Whole-Genome Sequences of 25 Salmonella enterica Strains
            Representing 24 Serovars
  JOURNAL   Genome Announc 4 (2), e01718-15 (2016)
   PUBMED   26941156
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4796858)
  AUTHORS   Yoshida,C., Brumwell,S.L., Lingohr,E.J., Weill,F.-X. and Nash,J.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-AUG-2015) Public Health Agency of Canada, Laboratory
            for Foodborne Zoonoses, 110 Stone Road West, Guelph, Ontario
            N1G3W4, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LHTH00000000.1.
            The Salmonella enterica subsp. salamae serovar 56:z10:e,n,x str.
            1369-73 whole genome shotgun (WGS) project has the project
            accession NZ_LHTH00000000.  This version of the project (01) has
            the accession number NZ_LHTH01000000, and consists of sequences
            LHTH01000001-LHTH01000028.
            Annotation modified by submitter. Annotation was added by the NCBI
            Prokaryotic Genome Annotation Pipeline (released 2013). Information
            about the Pipeline can be found here:
            http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MIRA v. 3.9.18
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 159.74x
            Sequencing Technology  :: 454; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001448865.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:10:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,620
            CDSs (total)                      :: 4,505
            Genes (coding)                    :: 4,309
            CDSs (with protein)               :: 4,309
            Genes (RNA)                       :: 115
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 3, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5, 7 (16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 196
            CDSs (without protein)            :: 196
            Pseudo Genes (ambiguous residues) :: 0 of 196
            Pseudo Genes (frameshifted)       :: 93 of 196
            Pseudo Genes (incomplete)         :: 124 of 196
            Pseudo Genes (internal stop)      :: 24 of 196
            Pseudo Genes (multiple problems)  :: 39 of 196
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4796858
                     /organism="Salmonella enterica subsp. salamae serovar
                     56:z10:e,n,x str. 1369-73"
                     /mol_type="genomic DNA"
                     /strain="1369-73"
                     /serovar="56:z10:e,n,x"
                     /host="Reptilia"
                     /sub_species="salamae"
                     /db_xref="taxon:1243604"
                     /geo_loc_name="South Africa"
                     /collection_date="1973"
                     /collected_by="Institut Pasteur, Paris, France"
                     /serogroup="O56"
WGS         LHTH01000001-LHTH01000028
WGS_SCAFLD  NZ_LHTH01000001-NZ_LHTH01000028
//
LOCUS       NZ_QBIM01000000      4740754 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Saintpaul strain
            CFSAN051007, whole genome shotgun sequencing project.
ACCESSION   NZ_QBIM00000000
VERSION     NZ_QBIM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05195902
            Assembly: GCF_003068765.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Saintpaul
  ORGANISM  Salmonella enterica subsp. enterica serovar Saintpaul
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4740754)
  AUTHORS   Bell,R.
  TITLE     Whole genome sequencing of Salmonella enterica
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4740754)
  AUTHORS   Bell,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2018) CFSAN-ORS-DM-MMSB, US Food and Drug
            Administration, 5100 Paint Branch Parkway, College Park, MD 20740,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QBIM00000000.1.
            The Salmonella enterica subsp. enterica serovar Saintpaul whole
            genome shotgun (WGS) project has the project accession
            NZ_QBIM00000000.  This version of the project (01) has the
            accession number NZ_QBIM01000000, and consists of sequences
            QBIM01000001-QBIM01000061.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 11-APR-2018
            Assembly Method        :: SPAdes v. 3.11.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 51x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003068765.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:05:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,681
            CDSs (total)                      :: 4,574
            Genes (coding)                    :: 4,393
            CDSs (with protein)               :: 4,393
            Genes (RNA)                       :: 107
            rRNAs                             :: 7, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1 (5S, 16S)
            partial rRNAs                     :: 2, 1, 4 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 15
            Pseudo Genes (total)              :: 181
            CDSs (without protein)            :: 181
            Pseudo Genes (ambiguous residues) :: 0 of 181
            Pseudo Genes (frameshifted)       :: 56 of 181
            Pseudo Genes (incomplete)         :: 136 of 181
            Pseudo Genes (internal stop)      :: 33 of 181
            Pseudo Genes (multiple problems)  :: 39 of 181
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4740754
                     /organism="Salmonella enterica subsp. enterica serovar
                     Saintpaul"
                     /mol_type="genomic DNA"
                     /strain="CFSAN051007"
                     /serovar="Saintpaul"
                     /isolation_source="Pond"
                     /sub_species="enterica"
                     /db_xref="taxon:90105"
                     /geo_loc_name="USA: GA"
                     /collection_date="2014-06-18"
                     /collected_by="Emory University/FDA CFSAN"
WGS         QBIM01000001-QBIM01000061
WGS_SCAFLD  NZ_QBIM01000001-NZ_QBIM01000061
//
LOCUS       NZ_UIOZ01000000      4609720 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Shigella flexneri strain 4028STDY6275033, whole genome shotgun
            sequencing project.
ACCESSION   NZ_UIOZ00000000
VERSION     NZ_UIOZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA3710493
            Assembly: GCF_900485395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Shigella flexneri
  ORGANISM  Shigella flexneri
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Shigella.
REFERENCE   1
  AUTHORS   Doyle,S.
  CONSRTM   Pathogen Informatics
  TITLE     Direct Submission
  JOURNAL   Submitted (13-JUN-2018) WTSI, Pathogen Informatics, Wellcome Trust
            Sanger Institute, CB10 1SA, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            UIOZ00000000.1.
            The Shigella flexneri whole genome shotgun (WGS) project has the
            project accession NZ_UIOZ00000000.  This version of the project
            (01) has the accession number NZ_UIOZ01000000, and consists of
            sequences UIOZ01000001-UIOZ01000331.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_900485395.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:09:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,162
            CDSs (total)                      :: 5,035
            Genes (coding)                    :: 4,205
            CDSs (with protein)               :: 4,205
            Genes (RNA)                       :: 127
            rRNAs                             :: 8, 6, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 23S)
            partial rRNAs                     :: 5, 6, 2 (5S, 16S, 23S)
            tRNAs                             :: 103
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 830
            CDSs (without protein)            :: 830
            Pseudo Genes (ambiguous residues) :: 0 of 830
            Pseudo Genes (frameshifted)       :: 274 of 830
            Pseudo Genes (incomplete)         :: 513 of 830
            Pseudo Genes (internal stop)      :: 173 of 830
            Pseudo Genes (multiple problems)  :: 121 of 830
            Pseudo Genes (short protein)      :: 1 of 830
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4609720
                     /organism="Shigella flexneri"
                     /mol_type="genomic DNA"
                     /strain="4028STDY6275033"
                     /serovar="2A"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:623"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2013"
WGS         UIOZ01000001-UIOZ01000331
WGS_SCAFLD  NZ_UIOZ01000001-NZ_UIOZ01000331
//
LOCUS       NZ_JBJJNO010000000   2838095 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Staphylococcus aureus strain MRSA_14_Hy, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJJNO000000000
VERSION     NZ_JBJJNO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44253486
            Assembly: GCF_045570735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2838095)
  AUTHORS   Cipriani,G., Mazzon,R., Helmersen,K., Wagner,G., Aamot,H.V. and
            Ferreira,F.A.
  TITLE     Evaluation of whole genome sequencing protocols for detection of
            antimicrobial resistance, virulence factors, and mobile genetic
            elements in antimicrobial-resistant bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2838095)
  AUTHORS   Cipriani,G., Helmersen,K., Mazzon,R., Wagner,G., Aamot,H.V. and
            Ferreira,F.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-NOV-2024) Department of Microbiology, Immunology and
            Parasitology (MIP), Universidade Federal de Santa Catarina (UFSC),
            Trindade campus, setor F, CCB block G, Florianopolis 88040-900,
            Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJJNO000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBJJNO000000000.  This version of the
            project (01) has the accession number NZ_JBJJNO010000000, and
            consists of sequences JBJJNO010000001-JBJJNO010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v.0.5.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045570735.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 14:19:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,811
            CDSs (total)                      :: 2,730
            Genes (coding)                    :: 2,613
            CDSs (with protein)               :: 2,613
            Genes (RNA)                       :: 81
            rRNAs                             :: 7, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 117
            CDSs (without protein)            :: 117
            Pseudo Genes (ambiguous residues) :: 0 of 117
            Pseudo Genes (frameshifted)       :: 60 of 117
            Pseudo Genes (incomplete)         :: 60 of 117
            Pseudo Genes (internal stop)      :: 32 of 117
            Pseudo Genes (multiple problems)  :: 31 of 117
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2838095
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="MRSA_14_Hy"
                     /isolation_source="clinical sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Norway"
                     /lat_lon="59.93 N 10.99 E"
                     /collected_by="Ahus"
WGS         JBJJNO010000001-JBJJNO010000006
WGS_SCAFLD  NZ_JBJJNO010000001-NZ_JBJJNO010000006
//
LOCUS       NZ_CDVKYC010000000   4278502 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Shewanella vesiculosa isolate MarMAG_056239, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVKYC000000000
VERSION     NZ_CDVKYC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737686
            Assembly: GCF_977707255.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Shewanella vesiculosa (freshwater metagenome)
  ORGANISM  Shewanella vesiculosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Shewanellaceae; Shewanella.
REFERENCE   1  (bases 1 to 4278502)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVKYC000000000.1.
            The Shewanella vesiculosa whole genome shotgun (WGS) project has
            the project accession NZ_CDVKYC000000000.  This version of the
            project (01) has the accession number NZ_CDVKYC010000000, and
            consists of sequences CDVKYC010000001-CDVKYC010000219.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977707255.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:38:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,767
            CDSs (total)                      :: 3,729
            Genes (coding)                    :: 3,678
            CDSs (with protein)               :: 3,678
            Genes (RNA)                       :: 38
            tRNAs                             :: 34
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 9 of 51
            Pseudo Genes (incomplete)         :: 47 of 51
            Pseudo Genes (internal stop)      :: 3 of 51
            Pseudo Genes (multiple problems)  :: 8 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4278502
                     /organism="Shewanella vesiculosa"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_056239"
                     /isolation_source="Aqueous sample"
                     /db_xref="taxon:518738"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /metagenome_source="freshwater metagenome"
                     /metagenomic
WGS         CDVKYC010000001-CDVKYC010000219
WGS_SCAFLD  NZ_CDVKYC010000001-NZ_CDVKYC010000219
//
LOCUS       NZ_JBJCXV010000000   1861088 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ20spy7003-M1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCXV000000000
VERSION     NZ_JBJCXV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617896
            Assembly: GCF_056157305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1861088)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCXV000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCXV000000000.  This version of the
            project (01) has the accession number NZ_JBJCXV010000000, and
            consists of sequences JBJCXV010000001-JBJCXV010000026.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157305.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:38:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,864
            CDSs (total)                      :: 1,821
            Genes (coding)                    :: 1,757
            CDSs (with protein)               :: 1,757
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 36
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 33 of 64
            Pseudo Genes (incomplete)         :: 35 of 64
            Pseudo Genes (internal stop)      :: 19 of 64
            Pseudo Genes (multiple problems)  :: 17 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1861088
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ20spy7003-M1"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCXV010000001-JBJCXV010000026
WGS_SCAFLD  NZ_JBJCXV010000001-NZ_JBJCXV010000026
//
LOCUS       NZ_JBJCYA010000000   1894120 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ19SPY7060-M1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCYA000000000
VERSION     NZ_JBJCYA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617891
            Assembly: GCF_056157405.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1894120)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCYA000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCYA000000000.  This version of the
            project (01) has the accession number NZ_JBJCYA010000000, and
            consists of sequences JBJCYA010000001-JBJCYA010000032.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157405.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:42:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,905
            CDSs (total)                      :: 1,862
            Genes (coding)                    :: 1,800
            CDSs (with protein)               :: 1,800
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 2, 2 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 62
            CDSs (without protein)            :: 62
            Pseudo Genes (ambiguous residues) :: 0 of 62
            Pseudo Genes (frameshifted)       :: 31 of 62
            Pseudo Genes (incomplete)         :: 38 of 62
            Pseudo Genes (internal stop)      :: 16 of 62
            Pseudo Genes (multiple problems)  :: 17 of 62
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1894120
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ19SPY7060-M1"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCYA010000001-JBJCYA010000032
WGS_SCAFLD  NZ_JBJCYA010000001-NZ_JBJCYA010000032
//
LOCUS       NZ_JBJCYE010000000   1892449 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ19SPY7014-M1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCYE000000000
VERSION     NZ_JBJCYE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617887
            Assembly: GCF_056157485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1892449)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCYE000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCYE000000000.  This version of the
            project (01) has the accession number NZ_JBJCYE010000000, and
            consists of sequences JBJCYE010000001-JBJCYE010000025.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157485.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:40:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,903
            CDSs (total)                      :: 1,859
            Genes (coding)                    :: 1,797
            CDSs (with protein)               :: 1,797
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 37
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 62
            CDSs (without protein)            :: 62
            Pseudo Genes (ambiguous residues) :: 0 of 62
            Pseudo Genes (frameshifted)       :: 31 of 62
            Pseudo Genes (incomplete)         :: 36 of 62
            Pseudo Genes (internal stop)      :: 17 of 62
            Pseudo Genes (multiple problems)  :: 16 of 62
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1892449
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ19SPY7014-M1"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCYE010000001-JBJCYE010000025
WGS_SCAFLD  NZ_JBJCYE010000001-NZ_JBJCYE010000025
//
LOCUS       NZ_JBJCXS010000000   1900472 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ20spy7011-M1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCXS000000000
VERSION     NZ_JBJCXS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617899
            Assembly: GCF_056157245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1900472)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCXS000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCXS000000000.  This version of the
            project (01) has the accession number NZ_JBJCXS010000000, and
            consists of sequences JBJCXS010000001-JBJCXS010000027.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157245.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:32:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,920
            CDSs (total)                      :: 1,874
            Genes (coding)                    :: 1,806
            CDSs (with protein)               :: 1,806
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 35 of 68
            Pseudo Genes (incomplete)         :: 38 of 68
            Pseudo Genes (internal stop)      :: 18 of 68
            Pseudo Genes (multiple problems)  :: 17 of 68
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1900472
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ20spy7011-M1"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCXS010000001-JBJCXS010000027
WGS_SCAFLD  NZ_JBJCXS010000001-NZ_JBJCXS010000027
//
LOCUS       NZ_JBJCXU010000000   1860371 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ20spy7005-M1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCXU000000000
VERSION     NZ_JBJCXU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617897
            Assembly: GCF_056157285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1860371)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCXU000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCXU000000000.  This version of the
            project (01) has the accession number NZ_JBJCXU010000000, and
            consists of sequences JBJCXU010000001-JBJCXU010000026.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157285.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:33:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,867
            CDSs (total)                      :: 1,820
            Genes (coding)                    :: 1,753
            CDSs (with protein)               :: 1,753
            Genes (RNA)                       :: 47
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 35 of 67
            Pseudo Genes (incomplete)         :: 36 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 17 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1860371
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ20spy7005-M1"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCXU010000001-JBJCXU010000026
WGS_SCAFLD  NZ_JBJCXU010000001-NZ_JBJCXU010000026
//
LOCUS       NZ_JBJCXX010000000   1895165 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ19spy7071-M1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCXX000000000
VERSION     NZ_JBJCXX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617894
            Assembly: GCF_056157345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1895165)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCXX000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCXX000000000.  This version of the
            project (01) has the accession number NZ_JBJCXX010000000, and
            consists of sequences JBJCXX010000001-JBJCXX010000030.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157345.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:37:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,905
            CDSs (total)                      :: 1,869
            Genes (coding)                    :: 1,806
            CDSs (with protein)               :: 1,806
            Genes (RNA)                       :: 36
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 29
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 31 of 63
            Pseudo Genes (incomplete)         :: 37 of 63
            Pseudo Genes (internal stop)      :: 17 of 63
            Pseudo Genes (multiple problems)  :: 16 of 63
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1895165
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ19spy7071-M1"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCXX010000001-JBJCXX010000030
WGS_SCAFLD  NZ_JBJCXX010000001-NZ_JBJCXX010000030
//
LOCUS       NZ_JBJCYF010000000   1888542 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain YQ008-2014-M1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCYF000000000
VERSION     NZ_JBJCYF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617886
            Assembly: GCF_056157505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1888542)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCYF000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCYF000000000.  This version of the
            project (01) has the accession number NZ_JBJCYF010000000, and
            consists of sequences JBJCYF010000001-JBJCYF010000028.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157505.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:39:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,906
            CDSs (total)                      :: 1,872
            Genes (coding)                    :: 1,797
            CDSs (with protein)               :: 1,797
            Genes (RNA)                       :: 34
            tRNAs                             :: 30
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 37 of 75
            Pseudo Genes (incomplete)         :: 41 of 75
            Pseudo Genes (internal stop)      :: 18 of 75
            Pseudo Genes (multiple problems)  :: 15 of 75
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1888542
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="YQ008-2014-M1"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCYF010000001-JBJCYF010000028
WGS_SCAFLD  NZ_JBJCYF010000001-NZ_JBJCYF010000028
//
LOCUS       NZ_JBJCVZ010000000   1847392 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ19spy7067-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCVZ000000000
VERSION     NZ_JBJCVZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617944
            Assembly: GCF_056154585.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1847392)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCVZ000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCVZ000000000.  This version of the
            project (01) has the accession number NZ_JBJCVZ010000000, and
            consists of sequences JBJCVZ010000001-JBJCVZ010000044.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154585.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:43:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,835
            CDSs (total)                      :: 1,794
            Genes (coding)                    :: 1,729
            CDSs (with protein)               :: 1,729
            Genes (RNA)                       :: 41
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 27 of 65
            Pseudo Genes (incomplete)         :: 43 of 65
            Pseudo Genes (internal stop)      :: 17 of 65
            Pseudo Genes (multiple problems)  :: 18 of 65
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1847392
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ19spy7067-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCVZ010000001-JBJCVZ010000044
WGS_SCAFLD  NZ_JBJCVZ010000001-NZ_JBJCVZ010000044
//
LOCUS       NZ_JBJCWX010000000   1849052 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain XCB015-2014, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCWX000000000
VERSION     NZ_JBJCWX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617920
            Assembly: GCF_056155025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1849052)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCWX000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCWX000000000.  This version of the
            project (01) has the accession number NZ_JBJCWX010000000, and
            consists of sequences JBJCWX010000001-JBJCWX010000043.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155025.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:49:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,837
            CDSs (total)                      :: 1,795
            Genes (coding)                    :: 1,729
            CDSs (with protein)               :: 1,729
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 35
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 66
            CDSs (without protein)            :: 66
            Pseudo Genes (ambiguous residues) :: 0 of 66
            Pseudo Genes (frameshifted)       :: 27 of 66
            Pseudo Genes (incomplete)         :: 43 of 66
            Pseudo Genes (internal stop)      :: 18 of 66
            Pseudo Genes (multiple problems)  :: 18 of 66
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1849052
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="XCB015-2014"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCWX010000001-JBJCWX010000043
WGS_SCAFLD  NZ_JBJCWX010000001-NZ_JBJCWX010000043
//
LOCUS       NZ_JBJCXD010000000   1849420 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain XC9-2017, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCXD000000000
VERSION     NZ_JBJCXD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617914
            Assembly: GCF_056156945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1849420)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCXD000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCXD000000000.  This version of the
            project (01) has the accession number NZ_JBJCXD010000000, and
            consists of sequences JBJCXD010000001-JBJCXD010000044.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056156945.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:11:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,839
            CDSs (total)                      :: 1,795
            Genes (coding)                    :: 1,729
            CDSs (with protein)               :: 1,729
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 66
            CDSs (without protein)            :: 66
            Pseudo Genes (ambiguous residues) :: 0 of 66
            Pseudo Genes (frameshifted)       :: 28 of 66
            Pseudo Genes (incomplete)         :: 42 of 66
            Pseudo Genes (internal stop)      :: 18 of 66
            Pseudo Genes (multiple problems)  :: 18 of 66
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1849420
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="XC9-2017"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCXD010000001-JBJCXD010000044
WGS_SCAFLD  NZ_JBJCXD010000001-NZ_JBJCXD010000044
//
LOCUS       NZ_JBJCVR010000000   1850088 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ20spy7017-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCVR000000000
VERSION     NZ_JBJCVR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617952
            Assembly: GCF_056154385.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1850088)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCVR000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCVR000000000.  This version of the
            project (01) has the accession number NZ_JBJCVR010000000, and
            consists of sequences JBJCVR010000001-JBJCVR010000044.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154385.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:40:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,835
            CDSs (total)                      :: 1,795
            Genes (coding)                    :: 1,730
            CDSs (with protein)               :: 1,730
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 28 of 65
            Pseudo Genes (incomplete)         :: 41 of 65
            Pseudo Genes (internal stop)      :: 18 of 65
            Pseudo Genes (multiple problems)  :: 18 of 65
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1850088
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ20spy7017-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCVR010000001-JBJCVR010000044
WGS_SCAFLD  NZ_JBJCVR010000001-NZ_JBJCVR010000044
//
LOCUS       NZ_JBJCXQ010000000   1852606 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ2378-M1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCXQ000000000
VERSION     NZ_JBJCXQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617901
            Assembly: GCF_056157205.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1852606)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCXQ000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCXQ000000000.  This version of the
            project (01) has the accession number NZ_JBJCXQ010000000, and
            consists of sequences JBJCXQ010000001-JBJCXQ010000027.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157205.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:25:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,858
            CDSs (total)                      :: 1,818
            Genes (coding)                    :: 1,753
            CDSs (with protein)               :: 1,753
            Genes (RNA)                       :: 40
            rRNAs                             :: 1 (23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 35
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 33 of 65
            Pseudo Genes (incomplete)         :: 37 of 65
            Pseudo Genes (internal stop)      :: 18 of 65
            Pseudo Genes (multiple problems)  :: 17 of 65
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1852606
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ2378-M1"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCXQ010000001-JBJCXQ010000027
WGS_SCAFLD  NZ_JBJCXQ010000001-NZ_JBJCXQ010000027
//
LOCUS       NZ_JBJCYD010000000   1862452 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ19spy7043-M1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCYD000000000
VERSION     NZ_JBJCYD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617888
            Assembly: GCF_056157465.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1862452)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCYD000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCYD000000000.  This version of the
            project (01) has the accession number NZ_JBJCYD010000000, and
            consists of sequences JBJCYD010000001-JBJCYD010000027.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157465.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:33:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,871
            CDSs (total)                      :: 1,822
            Genes (coding)                    :: 1,759
            CDSs (with protein)               :: 1,759
            Genes (RNA)                       :: 49
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 32 of 63
            Pseudo Genes (incomplete)         :: 35 of 63
            Pseudo Genes (internal stop)      :: 19 of 63
            Pseudo Genes (multiple problems)  :: 17 of 63
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1862452
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ19spy7043-M1"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCYD010000001-JBJCYD010000027
WGS_SCAFLD  NZ_JBJCYD010000001-NZ_JBJCYD010000027
//
LOCUS       NZ_JBJCWA010000000   1816556 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ19spy7061-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCWA000000000
VERSION     NZ_JBJCWA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617943
            Assembly: GCF_056154545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1816556)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCWA000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCWA000000000.  This version of the
            project (01) has the accession number NZ_JBJCWA010000000, and
            consists of sequences JBJCWA010000001-JBJCWA010000040.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154545.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:41:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,778
            CDSs (total)                      :: 1,743
            Genes (coding)                    :: 1,689
            CDSs (with protein)               :: 1,689
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 27
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 23 of 54
            Pseudo Genes (incomplete)         :: 35 of 54
            Pseudo Genes (internal stop)      :: 18 of 54
            Pseudo Genes (multiple problems)  :: 18 of 54
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1816556
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ19spy7061-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCWA010000001-JBJCWA010000040
WGS_SCAFLD  NZ_JBJCWA010000001-NZ_JBJCWA010000040
//
LOCUS       NZ_JBJCXO010000000   1897450 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ2432-M1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCXO000000000
VERSION     NZ_JBJCXO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617903
            Assembly: GCF_056157165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1897450)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCXO000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCXO000000000.  This version of the
            project (01) has the accession number NZ_JBJCXO010000000, and
            consists of sequences JBJCXO010000001-JBJCXO010000032.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157165.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:28:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,917
            CDSs (total)                      :: 1,871
            Genes (coding)                    :: 1,806
            CDSs (with protein)               :: 1,806
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 31 of 65
            Pseudo Genes (incomplete)         :: 39 of 65
            Pseudo Genes (internal stop)      :: 17 of 65
            Pseudo Genes (multiple problems)  :: 16 of 65
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1897450
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ2432-M1"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCXO010000001-JBJCXO010000032
WGS_SCAFLD  NZ_JBJCXO010000001-NZ_JBJCXO010000032
//
LOCUS       NZ_JBJCYC010000000   1899215 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ19spy7044-M1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCYC000000000
VERSION     NZ_JBJCYC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617889
            Assembly: GCF_056157425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1899215)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCYC000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCYC000000000.  This version of the
            project (01) has the accession number NZ_JBJCYC010000000, and
            consists of sequences JBJCYC010000001-JBJCYC010000030.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157425.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:41:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,915
            CDSs (total)                      :: 1,874
            Genes (coding)                    :: 1,805
            CDSs (with protein)               :: 1,805
            Genes (RNA)                       :: 41
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 35 of 69
            Pseudo Genes (incomplete)         :: 38 of 69
            Pseudo Genes (internal stop)      :: 20 of 69
            Pseudo Genes (multiple problems)  :: 18 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1899215
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ19spy7044-M1"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCYC010000001-JBJCYC010000030
WGS_SCAFLD  NZ_JBJCYC010000001-NZ_JBJCYC010000030
//
LOCUS       NZ_JBJCWY010000000   1819238 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain XCB013-2013, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCWY000000000
VERSION     NZ_JBJCWY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617919
            Assembly: GCF_056155065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1819238)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCWY000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCWY000000000.  This version of the
            project (01) has the accession number NZ_JBJCWY010000000, and
            consists of sequences JBJCWY010000001-JBJCWY010000036.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155065.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:43:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,791
            CDSs (total)                      :: 1,748
            Genes (coding)                    :: 1,689
            CDSs (with protein)               :: 1,689
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 36
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 27 of 59
            Pseudo Genes (incomplete)         :: 36 of 59
            Pseudo Genes (internal stop)      :: 19 of 59
            Pseudo Genes (multiple problems)  :: 19 of 59
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1819238
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="XCB013-2013"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCWY010000001-JBJCWY010000036
WGS_SCAFLD  NZ_JBJCWY010000001-NZ_JBJCWY010000036
//
LOCUS       NZ_JBJCYL010000000   1860688 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain XCB049-2014-M1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCYL000000000
VERSION     NZ_JBJCYL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617880
            Assembly: GCF_056157625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1860688)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCYL000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCYL000000000.  This version of the
            project (01) has the accession number NZ_JBJCYL010000000, and
            consists of sequences JBJCYL010000001-JBJCYL010000023.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157625.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:36:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,859
            CDSs (total)                      :: 1,822
            Genes (coding)                    :: 1,757
            CDSs (with protein)               :: 1,757
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 30
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 31 of 65
            Pseudo Genes (incomplete)         :: 39 of 65
            Pseudo Genes (internal stop)      :: 17 of 65
            Pseudo Genes (multiple problems)  :: 16 of 65
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1860688
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="XCB049-2014-M1"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCYL010000001-JBJCYL010000023
WGS_SCAFLD  NZ_JBJCYL010000001-NZ_JBJCYL010000023
//
LOCUS       NZ_JBJCVD010000000   1848600 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ3043-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCVD000000000
VERSION     NZ_JBJCVD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617966
            Assembly: GCF_056154125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1848600)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCVD000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCVD000000000.  This version of the
            project (01) has the accession number NZ_JBJCVD010000000, and
            consists of sequences JBJCVD010000001-JBJCVD010000045.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154125.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:40:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,832
            CDSs (total)                      :: 1,797
            Genes (coding)                    :: 1,729
            CDSs (with protein)               :: 1,729
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 27 of 68
            Pseudo Genes (incomplete)         :: 45 of 68
            Pseudo Genes (internal stop)      :: 18 of 68
            Pseudo Genes (multiple problems)  :: 18 of 68
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1848600
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ3043-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCVD010000001-JBJCVD010000045
WGS_SCAFLD  NZ_JBJCVD010000001-NZ_JBJCVD010000045
//
LOCUS       NZ_JBJCVO010000000   1849746 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ2358-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCVO000000000
VERSION     NZ_JBJCVO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617955
            Assembly: GCF_056154325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1849746)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCVO000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCVO000000000.  This version of the
            project (01) has the accession number NZ_JBJCVO010000000, and
            consists of sequences JBJCVO010000001-JBJCVO010000043.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154325.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:37:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,835
            CDSs (total)                      :: 1,795
            Genes (coding)                    :: 1,730
            CDSs (with protein)               :: 1,730
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 27 of 65
            Pseudo Genes (incomplete)         :: 42 of 65
            Pseudo Genes (internal stop)      :: 18 of 65
            Pseudo Genes (multiple problems)  :: 18 of 65
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1849746
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ2358-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCVO010000001-JBJCVO010000043
WGS_SCAFLD  NZ_JBJCVO010000001-NZ_JBJCVO010000043
//
LOCUS       NZ_JBJCWP010000000   1840922 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain XCN9-2014, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCWP000000000
VERSION     NZ_JBJCWP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617928
            Assembly: GCF_056154845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1840922)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCWP000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCWP000000000.  This version of the
            project (01) has the accession number NZ_JBJCWP010000000, and
            consists of sequences JBJCWP010000001-JBJCWP010000047.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154845.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:42:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,828
            CDSs (total)                      :: 1,787
            Genes (coding)                    :: 1,720
            CDSs (with protein)               :: 1,720
            Genes (RNA)                       :: 41
            rRNAs                             :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 35
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 27 of 67
            Pseudo Genes (incomplete)         :: 45 of 67
            Pseudo Genes (internal stop)      :: 17 of 67
            Pseudo Genes (multiple problems)  :: 18 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1840922
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="XCN9-2014"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCWP010000001-JBJCWP010000047
WGS_SCAFLD  NZ_JBJCWP010000001-NZ_JBJCWP010000047
//
LOCUS       NZ_JBJCWW010000000   1850530 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain XCB018-2013, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCWW000000000
VERSION     NZ_JBJCWW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617921
            Assembly: GCF_056155005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1850530)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCWW000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCWW000000000.  This version of the
            project (01) has the accession number NZ_JBJCWW010000000, and
            consists of sequences JBJCWW010000001-JBJCWW010000049.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155005.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:39:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,848
            CDSs (total)                      :: 1,801
            Genes (coding)                    :: 1,735
            CDSs (with protein)               :: 1,735
            Genes (RNA)                       :: 47
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 66
            CDSs (without protein)            :: 66
            Pseudo Genes (ambiguous residues) :: 0 of 66
            Pseudo Genes (frameshifted)       :: 27 of 66
            Pseudo Genes (incomplete)         :: 43 of 66
            Pseudo Genes (internal stop)      :: 18 of 66
            Pseudo Genes (multiple problems)  :: 18 of 66
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1850530
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="XCB018-2013"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCWW010000001-JBJCWW010000049
WGS_SCAFLD  NZ_JBJCWW010000001-NZ_JBJCWW010000049
//
LOCUS       NZ_JBJCVX010000000   1825538 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ19spy7069-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCVX000000000
VERSION     NZ_JBJCVX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617946
            Assembly: GCF_056154505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1825538)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCVX000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCVX000000000.  This version of the
            project (01) has the accession number NZ_JBJCVX010000000, and
            consists of sequences JBJCVX010000001-JBJCVX010000040.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154505.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:44:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,791
            CDSs (total)                      :: 1,755
            Genes (coding)                    :: 1,697
            CDSs (with protein)               :: 1,697
            Genes (RNA)                       :: 36
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 58
            CDSs (without protein)            :: 58
            Pseudo Genes (ambiguous residues) :: 0 of 58
            Pseudo Genes (frameshifted)       :: 26 of 58
            Pseudo Genes (incomplete)         :: 36 of 58
            Pseudo Genes (internal stop)      :: 18 of 58
            Pseudo Genes (multiple problems)  :: 18 of 58
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1825538
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ19spy7069-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCVX010000001-JBJCVX010000040
WGS_SCAFLD  NZ_JBJCVX010000001-NZ_JBJCVX010000040
//
LOCUS       NZ_JBJCXJ010000000   1791472 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZY28-2014-M1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCXJ000000000
VERSION     NZ_JBJCXJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617908
            Assembly: GCF_056157065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1791472)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCXJ000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCXJ000000000.  This version of the
            project (01) has the accession number NZ_JBJCXJ010000000, and
            consists of sequences JBJCXJ010000001-JBJCXJ010000021.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157065.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:17:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,762
            CDSs (total)                      :: 1,715
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 47
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 89
            CDSs (without protein)            :: 89
            Pseudo Genes (ambiguous residues) :: 0 of 89
            Pseudo Genes (frameshifted)       :: 37 of 89
            Pseudo Genes (incomplete)         :: 52 of 89
            Pseudo Genes (internal stop)      :: 28 of 89
            Pseudo Genes (multiple problems)  :: 23 of 89
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1791472
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZY28-2014-M1"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCXJ010000001-JBJCXJ010000021
WGS_SCAFLD  NZ_JBJCXJ010000001-NZ_JBJCXJ010000021
//
LOCUS       NZ_JBJCWO010000000   1855790 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain YQ5-2012, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCWO000000000
VERSION     NZ_JBJCWO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617929
            Assembly: GCF_056154885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1855790)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCWO000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCWO000000000.  This version of the
            project (01) has the accession number NZ_JBJCWO010000000, and
            consists of sequences JBJCWO010000001-JBJCWO010000045.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154885.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:47:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,850
            CDSs (total)                      :: 1,803
            Genes (coding)                    :: 1,738
            CDSs (with protein)               :: 1,738
            Genes (RNA)                       :: 47
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 26 of 65
            Pseudo Genes (incomplete)         :: 43 of 65
            Pseudo Genes (internal stop)      :: 18 of 65
            Pseudo Genes (multiple problems)  :: 18 of 65
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1855790
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="YQ5-2012"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCWO010000001-JBJCWO010000045
WGS_SCAFLD  NZ_JBJCWO010000001-NZ_JBJCWO010000045
//
LOCUS       NZ_JBJCXT010000000   1858019 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ20spy7006-M1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCXT000000000
VERSION     NZ_JBJCXT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617898
            Assembly: GCF_056157265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1858019)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCXT000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCXT000000000.  This version of the
            project (01) has the accession number NZ_JBJCXT010000000, and
            consists of sequences JBJCXT010000001-JBJCXT010000026.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157265.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:29:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,860
            CDSs (total)                      :: 1,820
            Genes (coding)                    :: 1,752
            CDSs (with protein)               :: 1,752
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 35 of 68
            Pseudo Genes (incomplete)         :: 38 of 68
            Pseudo Genes (internal stop)      :: 18 of 68
            Pseudo Genes (multiple problems)  :: 17 of 68
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1858019
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ20spy7006-M1"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCXT010000001-JBJCXT010000026
WGS_SCAFLD  NZ_JBJCXT010000001-NZ_JBJCXT010000026
//
LOCUS       NZ_JBJCVI010000000   1819580 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ2413-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCVI000000000
VERSION     NZ_JBJCVI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617961
            Assembly: GCF_056154205.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1819580)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCVI000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCVI000000000.  This version of the
            project (01) has the accession number NZ_JBJCVI010000000, and
            consists of sequences JBJCVI010000001-JBJCVI010000037.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154205.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:40:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,792
            CDSs (total)                      :: 1,748
            Genes (coding)                    :: 1,689
            CDSs (with protein)               :: 1,689
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 26 of 59
            Pseudo Genes (incomplete)         :: 37 of 59
            Pseudo Genes (internal stop)      :: 18 of 59
            Pseudo Genes (multiple problems)  :: 18 of 59
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1819580
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ2413-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCVI010000001-JBJCVI010000037
WGS_SCAFLD  NZ_JBJCVI010000001-NZ_JBJCVI010000037
//
LOCUS       NZ_JBJCVG010000000   1819063 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ2967-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCVG000000000
VERSION     NZ_JBJCVG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617963
            Assembly: GCF_056154165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1819063)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCVG000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCVG000000000.  This version of the
            project (01) has the accession number NZ_JBJCVG010000000, and
            consists of sequences JBJCVG010000001-JBJCVG010000035.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154165.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:37:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,782
            CDSs (total)                      :: 1,747
            Genes (coding)                    :: 1,688
            CDSs (with protein)               :: 1,688
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 27 of 59
            Pseudo Genes (incomplete)         :: 36 of 59
            Pseudo Genes (internal stop)      :: 18 of 59
            Pseudo Genes (multiple problems)  :: 18 of 59
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1819063
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ2967-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCVG010000001-JBJCVG010000035
WGS_SCAFLD  NZ_JBJCVG010000001-NZ_JBJCVG010000035
//
LOCUS       NZ_JBJCVV010000000   1850137 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ20spy7002-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCVV000000000
VERSION     NZ_JBJCVV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617948
            Assembly: GCF_056154465.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1850137)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCVV000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCVV000000000.  This version of the
            project (01) has the accession number NZ_JBJCVV010000000, and
            consists of sequences JBJCVV010000001-JBJCVV010000042.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154465.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:44:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,844
            CDSs (total)                      :: 1,796
            Genes (coding)                    :: 1,731
            CDSs (with protein)               :: 1,731
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 26 of 65
            Pseudo Genes (incomplete)         :: 43 of 65
            Pseudo Genes (internal stop)      :: 18 of 65
            Pseudo Genes (multiple problems)  :: 18 of 65
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1850137
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ20spy7002-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCVV010000001-JBJCVV010000042
WGS_SCAFLD  NZ_JBJCVV010000001-NZ_JBJCVV010000042
//
LOCUS       NZ_JBJCXK010000000   1899745 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ7063-M1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCXK000000000
VERSION     NZ_JBJCXK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617907
            Assembly: GCF_056157085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1899745)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCXK000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCXK000000000.  This version of the
            project (01) has the accession number NZ_JBJCXK010000000, and
            consists of sequences JBJCXK010000001-JBJCXK010000026.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157085.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:23:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,913
            CDSs (total)                      :: 1,873
            Genes (coding)                    :: 1,809
            CDSs (with protein)               :: 1,809
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 33 of 64
            Pseudo Genes (incomplete)         :: 35 of 64
            Pseudo Genes (internal stop)      :: 18 of 64
            Pseudo Genes (multiple problems)  :: 16 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1899745
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ7063-M1"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCXK010000001-JBJCXK010000026
WGS_SCAFLD  NZ_JBJCXK010000001-NZ_JBJCXK010000026
//
LOCUS       NZ_JBJCWI010000000   1832123 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ19SPY7015-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCWI000000000
VERSION     NZ_JBJCWI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617935
            Assembly: GCF_056154725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1832123)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCWI000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCWI000000000.  This version of the
            project (01) has the accession number NZ_JBJCWI010000000, and
            consists of sequences JBJCWI010000001-JBJCWI010000040.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154725.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:43:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,814
            CDSs (total)                      :: 1,782
            Genes (coding)                    :: 1,714
            CDSs (with protein)               :: 1,714
            Genes (RNA)                       :: 32
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 32 of 68
            Pseudo Genes (incomplete)         :: 40 of 68
            Pseudo Genes (internal stop)      :: 16 of 68
            Pseudo Genes (multiple problems)  :: 17 of 68
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1832123
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ19SPY7015-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCWI010000001-JBJCWI010000040
WGS_SCAFLD  NZ_JBJCWI010000001-NZ_JBJCWI010000040
//
LOCUS       NZ_JBJCVS010000000   1844662 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ20spy7010-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCVS000000000
VERSION     NZ_JBJCVS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617951
            Assembly: GCF_056154405.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1844662)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCVS000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCVS000000000.  This version of the
            project (01) has the accession number NZ_JBJCVS010000000, and
            consists of sequences JBJCVS010000001-JBJCVS010000039.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154405.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:38:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,823
            CDSs (total)                      :: 1,783
            Genes (coding)                    :: 1,713
            CDSs (with protein)               :: 1,713
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 27 of 70
            Pseudo Genes (incomplete)         :: 44 of 70
            Pseudo Genes (internal stop)      :: 21 of 70
            Pseudo Genes (multiple problems)  :: 18 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1844662
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ20spy7010-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCVS010000001-JBJCVS010000039
WGS_SCAFLD  NZ_JBJCVS010000001-NZ_JBJCVS010000039
//
LOCUS       NZ_JBJCVE010000000   1819096 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ3023-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCVE000000000
VERSION     NZ_JBJCVE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617965
            Assembly: GCF_056154105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1819096)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCVE000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCVE000000000.  This version of the
            project (01) has the accession number NZ_JBJCVE010000000, and
            consists of sequences JBJCVE010000001-JBJCVE010000036.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154105.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:39:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,795
            CDSs (total)                      :: 1,748
            Genes (coding)                    :: 1,688
            CDSs (with protein)               :: 1,688
            Genes (RNA)                       :: 47
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 60
            CDSs (without protein)            :: 60
            Pseudo Genes (ambiguous residues) :: 0 of 60
            Pseudo Genes (frameshifted)       :: 26 of 60
            Pseudo Genes (incomplete)         :: 37 of 60
            Pseudo Genes (internal stop)      :: 19 of 60
            Pseudo Genes (multiple problems)  :: 18 of 60
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1819096
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ3023-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCVE010000001-JBJCVE010000036
WGS_SCAFLD  NZ_JBJCVE010000001-NZ_JBJCVE010000036
//
LOCUS       NZ_JBJCWZ010000000   1849772 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain XCB010-2013, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCWZ000000000
VERSION     NZ_JBJCWZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617918
            Assembly: GCF_056155045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1849772)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCWZ000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCWZ000000000.  This version of the
            project (01) has the accession number NZ_JBJCWZ010000000, and
            consists of sequences JBJCWZ010000001-JBJCWZ010000044.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155045.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:50:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,840
            CDSs (total)                      :: 1,797
            Genes (coding)                    :: 1,730
            CDSs (with protein)               :: 1,730
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 36
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 28 of 67
            Pseudo Genes (incomplete)         :: 43 of 67
            Pseudo Genes (internal stop)      :: 18 of 67
            Pseudo Genes (multiple problems)  :: 18 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1849772
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="XCB010-2013"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCWZ010000001-JBJCWZ010000044
WGS_SCAFLD  NZ_JBJCWZ010000001-NZ_JBJCWZ010000044
//
LOCUS       NZ_JBJCXZ010000000   1858869 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ19spy7064-M1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCXZ000000000
VERSION     NZ_JBJCXZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617892
            Assembly: GCF_056157385.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1858869)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCXZ000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCXZ000000000.  This version of the
            project (01) has the accession number NZ_JBJCXZ010000000, and
            consists of sequences JBJCXZ010000001-JBJCXZ010000025.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157385.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:36:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,863
            CDSs (total)                      :: 1,821
            Genes (coding)                    :: 1,751
            CDSs (with protein)               :: 1,751
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 34
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 36 of 70
            Pseudo Genes (incomplete)         :: 41 of 70
            Pseudo Genes (internal stop)      :: 17 of 70
            Pseudo Genes (multiple problems)  :: 18 of 70
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1858869
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ19spy7064-M1"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCXZ010000001-JBJCXZ010000025
WGS_SCAFLD  NZ_JBJCXZ010000001-NZ_JBJCXZ010000025
//
LOCUS       NZ_JBJCWE010000000   1849730 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ19SPY7054-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCWE000000000
VERSION     NZ_JBJCWE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617939
            Assembly: GCF_056154645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1849730)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCWE000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCWE000000000.  This version of the
            project (01) has the accession number NZ_JBJCWE010000000, and
            consists of sequences JBJCWE010000001-JBJCWE010000044.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154645.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:43:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,840
            CDSs (total)                      :: 1,796
            Genes (coding)                    :: 1,731
            CDSs (with protein)               :: 1,731
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 26 of 65
            Pseudo Genes (incomplete)         :: 43 of 65
            Pseudo Genes (internal stop)      :: 18 of 65
            Pseudo Genes (multiple problems)  :: 18 of 65
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1849730
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ19SPY7054-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCWE010000001-JBJCWE010000044
WGS_SCAFLD  NZ_JBJCWE010000001-NZ_JBJCWE010000044
//
LOCUS       NZ_JBJCVY010000000   1848699 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ19SPY7068-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCVY000000000
VERSION     NZ_JBJCVY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617945
            Assembly: GCF_056154525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1848699)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCVY000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCVY000000000.  This version of the
            project (01) has the accession number NZ_JBJCVY010000000, and
            consists of sequences JBJCVY010000001-JBJCVY010000044.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154525.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:45:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,831
            CDSs (total)                      :: 1,796
            Genes (coding)                    :: 1,731
            CDSs (with protein)               :: 1,731
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 26 of 65
            Pseudo Genes (incomplete)         :: 43 of 65
            Pseudo Genes (internal stop)      :: 18 of 65
            Pseudo Genes (multiple problems)  :: 18 of 65
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1848699
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ19SPY7068-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCVY010000001-JBJCVY010000044
WGS_SCAFLD  NZ_JBJCVY010000001-NZ_JBJCVY010000044
//
LOCUS       NZ_JBJCVN010000000   1848389 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ2373-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCVN000000000
VERSION     NZ_JBJCVN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617956
            Assembly: GCF_056154305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1848389)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCVN000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCVN000000000.  This version of the
            project (01) has the accession number NZ_JBJCVN010000000, and
            consists of sequences JBJCVN010000001-JBJCVN010000039.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154305.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:40:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,835
            CDSs (total)                      :: 1,793
            Genes (coding)                    :: 1,724
            CDSs (with protein)               :: 1,724
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 35
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 45 of 69
            Pseudo Genes (internal stop)      :: 18 of 69
            Pseudo Genes (multiple problems)  :: 18 of 69
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1848389
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ2373-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCVN010000001-JBJCVN010000039
WGS_SCAFLD  NZ_JBJCVN010000001-NZ_JBJCVN010000039
//
LOCUS       NZ_JBJCWU010000000   1848894 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain XCB28-2012, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCWU000000000
VERSION     NZ_JBJCWU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617923
            Assembly: GCF_056154965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1848894)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCWU000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCWU000000000.  This version of the
            project (01) has the accession number NZ_JBJCWU010000000, and
            consists of sequences JBJCWU010000001-JBJCWU010000044.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154965.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:47:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,836
            CDSs (total)                      :: 1,796
            Genes (coding)                    :: 1,731
            CDSs (with protein)               :: 1,731
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 26 of 65
            Pseudo Genes (incomplete)         :: 43 of 65
            Pseudo Genes (internal stop)      :: 18 of 65
            Pseudo Genes (multiple problems)  :: 18 of 65
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1848894
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="XCB28-2012"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCWU010000001-JBJCWU010000044
WGS_SCAFLD  NZ_JBJCWU010000001-NZ_JBJCWU010000044
//
LOCUS       NZ_JBJCWL010000000   1845666 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain YQ8-2012, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCWL000000000
VERSION     NZ_JBJCWL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617932
            Assembly: GCF_056154745.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1845666)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCWL000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCWL000000000.  This version of the
            project (01) has the accession number NZ_JBJCWL010000000, and
            consists of sequences JBJCWL010000001-JBJCWL010000046.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154745.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:38:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,834
            CDSs (total)                      :: 1,792
            Genes (coding)                    :: 1,725
            CDSs (with protein)               :: 1,725
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 35
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 26 of 67
            Pseudo Genes (incomplete)         :: 46 of 67
            Pseudo Genes (internal stop)      :: 17 of 67
            Pseudo Genes (multiple problems)  :: 18 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1845666
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="YQ8-2012"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCWL010000001-JBJCWL010000046
WGS_SCAFLD  NZ_JBJCWL010000001-NZ_JBJCWL010000046
//
LOCUS       NZ_JBJCXN010000000   1789551 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ3211-M1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCXN000000000
VERSION     NZ_JBJCXN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617904
            Assembly: GCF_056157145.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1789551)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCXN000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCXN000000000.  This version of the
            project (01) has the accession number NZ_JBJCXN010000000, and
            consists of sequences JBJCXN010000001-JBJCXN010000019.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157145.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:17:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,790
            CDSs (total)                      :: 1,752
            Genes (coding)                    :: 1,697
            CDSs (with protein)               :: 1,697
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 32
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 55
            CDSs (without protein)            :: 55
            Pseudo Genes (ambiguous residues) :: 0 of 55
            Pseudo Genes (frameshifted)       :: 31 of 55
            Pseudo Genes (incomplete)         :: 31 of 55
            Pseudo Genes (internal stop)      :: 16 of 55
            Pseudo Genes (multiple problems)  :: 17 of 55
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1789551
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ3211-M1"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCXN010000001-JBJCXN010000019
WGS_SCAFLD  NZ_JBJCXN010000001-NZ_JBJCXN010000019
//
LOCUS       NZ_JBJCXY010000000   1900849 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ19SPY7070-M1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCXY000000000
VERSION     NZ_JBJCXY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617893
            Assembly: GCF_056157365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1900849)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCXY000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCXY000000000.  This version of the
            project (01) has the accession number NZ_JBJCXY010000000, and
            consists of sequences JBJCXY010000001-JBJCXY010000026.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157365.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:39:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,919
            CDSs (total)                      :: 1,874
            Genes (coding)                    :: 1,809
            CDSs (with protein)               :: 1,809
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 38
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 34 of 65
            Pseudo Genes (incomplete)         :: 35 of 65
            Pseudo Genes (internal stop)      :: 18 of 65
            Pseudo Genes (multiple problems)  :: 16 of 65
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1900849
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ19SPY7070-M1"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCXY010000001-JBJCXY010000026
WGS_SCAFLD  NZ_JBJCXY010000001-NZ_JBJCXY010000026
//
LOCUS       NZ_JBJCVW010000000   1818362 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ19spy7075-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCVW000000000
VERSION     NZ_JBJCVW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617947
            Assembly: GCF_056154485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1818362)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCVW000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCVW000000000.  This version of the
            project (01) has the accession number NZ_JBJCVW010000000, and
            consists of sequences JBJCVW010000001-JBJCVW010000038.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154485.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:39:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,783
            CDSs (total)                      :: 1,748
            Genes (coding)                    :: 1,687
            CDSs (with protein)               :: 1,687
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 61
            CDSs (without protein)            :: 61
            Pseudo Genes (ambiguous residues) :: 0 of 61
            Pseudo Genes (frameshifted)       :: 27 of 61
            Pseudo Genes (incomplete)         :: 38 of 61
            Pseudo Genes (internal stop)      :: 18 of 61
            Pseudo Genes (multiple problems)  :: 18 of 61
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1818362
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ19spy7075-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCVW010000001-JBJCVW010000038
WGS_SCAFLD  NZ_JBJCVW010000001-NZ_JBJCVW010000038
//
LOCUS       NZ_JBJCXM010000000   1900580 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ7008-M1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCXM000000000
VERSION     NZ_JBJCXM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617905
            Assembly: GCF_056157125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1900580)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCXM000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCXM000000000.  This version of the
            project (01) has the accession number NZ_JBJCXM010000000, and
            consists of sequences JBJCXM010000001-JBJCXM010000026.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157125.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:18:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,918
            CDSs (total)                      :: 1,873
            Genes (coding)                    :: 1,809
            CDSs (with protein)               :: 1,809
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 38
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 33 of 64
            Pseudo Genes (incomplete)         :: 35 of 64
            Pseudo Genes (internal stop)      :: 18 of 64
            Pseudo Genes (multiple problems)  :: 16 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1900580
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ7008-M1"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCXM010000001-JBJCXM010000026
WGS_SCAFLD  NZ_JBJCXM010000001-NZ_JBJCXM010000026
//
LOCUS       NZ_JBJCWN010000000   1848819 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain YQ6-2012, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCWN000000000
VERSION     NZ_JBJCWN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617930
            Assembly: GCF_056154805.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1848819)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCWN000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCWN000000000.  This version of the
            project (01) has the accession number NZ_JBJCWN010000000, and
            consists of sequences JBJCWN010000001-JBJCWN010000043.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154805.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:46:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,830
            CDSs (total)                      :: 1,795
            Genes (coding)                    :: 1,729
            CDSs (with protein)               :: 1,729
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 66
            CDSs (without protein)            :: 66
            Pseudo Genes (ambiguous residues) :: 0 of 66
            Pseudo Genes (frameshifted)       :: 27 of 66
            Pseudo Genes (incomplete)         :: 43 of 66
            Pseudo Genes (internal stop)      :: 18 of 66
            Pseudo Genes (multiple problems)  :: 18 of 66
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1848819
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="YQ6-2012"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCWN010000001-JBJCWN010000043
WGS_SCAFLD  NZ_JBJCWN010000001-NZ_JBJCWN010000043
//
LOCUS       NZ_JBJCXG010000000   1892822 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain XC4-2012, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCXG000000000
VERSION     NZ_JBJCXG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617911
            Assembly: GCF_056157005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1892822)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCXG000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCXG000000000.  This version of the
            project (01) has the accession number NZ_JBJCXG010000000, and
            consists of sequences JBJCXG010000001-JBJCXG010000037.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157005.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:11:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,884
            CDSs (total)                      :: 1,844
            Genes (coding)                    :: 1,783
            CDSs (with protein)               :: 1,783
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 61
            CDSs (without protein)            :: 61
            Pseudo Genes (ambiguous residues) :: 0 of 61
            Pseudo Genes (frameshifted)       :: 25 of 61
            Pseudo Genes (incomplete)         :: 38 of 61
            Pseudo Genes (internal stop)      :: 19 of 61
            Pseudo Genes (multiple problems)  :: 17 of 61
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1892822
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="XC4-2012"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCXG010000001-JBJCXG010000037
WGS_SCAFLD  NZ_JBJCXG010000001-NZ_JBJCXG010000037
//
LOCUS       NZ_JBJCYO010000000   1839616 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain XCB025-2014-M1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCYO000000000
VERSION     NZ_JBJCYO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617877
            Assembly: GCF_056157685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1839616)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCYO000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCYO000000000.  This version of the
            project (01) has the accession number NZ_JBJCYO010000000, and
            consists of sequences JBJCYO010000001-JBJCYO010000027.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157685.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:34:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,861
            CDSs (total)                      :: 1,819
            Genes (coding)                    :: 1,756
            CDSs (with protein)               :: 1,756
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 35
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 31 of 63
            Pseudo Genes (incomplete)         :: 35 of 63
            Pseudo Genes (internal stop)      :: 19 of 63
            Pseudo Genes (multiple problems)  :: 16 of 63
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1839616
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="XCB025-2014-M1"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCYO010000001-JBJCYO010000027
WGS_SCAFLD  NZ_JBJCYO010000001-NZ_JBJCYO010000027
//
LOCUS       NZ_JBJCVL010000000   1819070 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ2384-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCVL000000000
VERSION     NZ_JBJCVL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617958
            Assembly: GCF_056154265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1819070)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCVL000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCVL000000000.  This version of the
            project (01) has the accession number NZ_JBJCVL010000000, and
            consists of sequences JBJCVL010000001-JBJCVL010000035.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154265.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:45:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,785
            CDSs (total)                      :: 1,745
            Genes (coding)                    :: 1,686
            CDSs (with protein)               :: 1,686
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 27 of 59
            Pseudo Genes (incomplete)         :: 35 of 59
            Pseudo Genes (internal stop)      :: 19 of 59
            Pseudo Genes (multiple problems)  :: 18 of 59
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1819070
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ2384-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCVL010000001-JBJCVL010000035
WGS_SCAFLD  NZ_JBJCVL010000001-NZ_JBJCVL010000035
//
LOCUS       NZ_JBJCXL010000000   1897235 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ7051-M1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCXL000000000
VERSION     NZ_JBJCXL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617906
            Assembly: GCF_056157105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1897235)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCXL000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCXL000000000.  This version of the
            project (01) has the accession number NZ_JBJCXL010000000, and
            consists of sequences JBJCXL010000001-JBJCXL010000033.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157105.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:20:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,909
            CDSs (total)                      :: 1,869
            Genes (coding)                    :: 1,802
            CDSs (with protein)               :: 1,802
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 31 of 67
            Pseudo Genes (incomplete)         :: 40 of 67
            Pseudo Genes (internal stop)      :: 18 of 67
            Pseudo Genes (multiple problems)  :: 16 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1897235
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ7051-M1"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCXL010000001-JBJCXL010000033
WGS_SCAFLD  NZ_JBJCXL010000001-NZ_JBJCXL010000033
//
LOCUS       NZ_JBJCXA010000000   1892949 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain XCB009-2014, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCXA000000000
VERSION     NZ_JBJCXA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617917
            Assembly: GCF_056156905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1892949)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCXA000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCXA000000000.  This version of the
            project (01) has the accession number NZ_JBJCXA010000000, and
            consists of sequences JBJCXA010000001-JBJCXA010000034.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056156905.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:12:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,886
            CDSs (total)                      :: 1,844
            Genes (coding)                    :: 1,784
            CDSs (with protein)               :: 1,784
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 35
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 60
            CDSs (without protein)            :: 60
            Pseudo Genes (ambiguous residues) :: 0 of 60
            Pseudo Genes (frameshifted)       :: 24 of 60
            Pseudo Genes (incomplete)         :: 38 of 60
            Pseudo Genes (internal stop)      :: 19 of 60
            Pseudo Genes (multiple problems)  :: 17 of 60
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1892949
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="XCB009-2014"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCXA010000001-JBJCXA010000034
WGS_SCAFLD  NZ_JBJCXA010000001-NZ_JBJCXA010000034
//
LOCUS       NZ_JBJCVQ010000000   1847405 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ20WJ8021-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCVQ000000000
VERSION     NZ_JBJCVQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617953
            Assembly: GCF_056154365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1847405)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCVQ000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCVQ000000000.  This version of the
            project (01) has the accession number NZ_JBJCVQ010000000, and
            consists of sequences JBJCVQ010000001-JBJCVQ010000045.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154365.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:39:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,839
            CDSs (total)                      :: 1,797
            Genes (coding)                    :: 1,730
            CDSs (with protein)               :: 1,730
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 35
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 26 of 67
            Pseudo Genes (incomplete)         :: 46 of 67
            Pseudo Genes (internal stop)      :: 17 of 67
            Pseudo Genes (multiple problems)  :: 18 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1847405
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ20WJ8021-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCVQ010000001-JBJCVQ010000045
WGS_SCAFLD  NZ_JBJCVQ010000001-NZ_JBJCVQ010000045
//
LOCUS       NZ_JBJCWK010000000   1849412 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain YQ8-2017, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCWK000000000
VERSION     NZ_JBJCWK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617933
            Assembly: GCF_056154785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1849412)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCWK000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCWK000000000.  This version of the
            project (01) has the accession number NZ_JBJCWK010000000, and
            consists of sequences JBJCWK010000001-JBJCWK010000046.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154785.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:43:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,841
            CDSs (total)                      :: 1,798
            Genes (coding)                    :: 1,730
            CDSs (with protein)               :: 1,730
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 36
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 26 of 68
            Pseudo Genes (incomplete)         :: 44 of 68
            Pseudo Genes (internal stop)      :: 20 of 68
            Pseudo Genes (multiple problems)  :: 18 of 68
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1849412
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="YQ8-2017"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCWK010000001-JBJCWK010000046
WGS_SCAFLD  NZ_JBJCWK010000001-NZ_JBJCWK010000046
//
LOCUS       NZ_JBJCWV010000000   1849273 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain XCB27-2012, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCWV000000000
VERSION     NZ_JBJCWV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617922
            Assembly: GCF_056154985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1849273)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCWV000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCWV000000000.  This version of the
            project (01) has the accession number NZ_JBJCWV010000000, and
            consists of sequences JBJCWV010000001-JBJCWV010000044.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154985.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:42:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,835
            CDSs (total)                      :: 1,795
            Genes (coding)                    :: 1,731
            CDSs (with protein)               :: 1,731
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 26 of 64
            Pseudo Genes (incomplete)         :: 42 of 64
            Pseudo Genes (internal stop)      :: 18 of 64
            Pseudo Genes (multiple problems)  :: 18 of 64
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1849273
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="XCB27-2012"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCWV010000001-JBJCWV010000044
WGS_SCAFLD  NZ_JBJCWV010000001-NZ_JBJCWV010000044
//
LOCUS       NZ_JBJCYH010000000   1897712 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain YQ003-2014-M1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCYH000000000
VERSION     NZ_JBJCYH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617884
            Assembly: GCF_056157545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1897712)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCYH000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCYH000000000.  This version of the
            project (01) has the accession number NZ_JBJCYH010000000, and
            consists of sequences JBJCYH010000001-JBJCYH010000029.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157545.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:39:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,905
            CDSs (total)                      :: 1,873
            Genes (coding)                    :: 1,803
            CDSs (with protein)               :: 1,803
            Genes (RNA)                       :: 32
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1, 2 (5S, 16S, 23S)
            tRNAs                             :: 24
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 32 of 70
            Pseudo Genes (incomplete)         :: 42 of 70
            Pseudo Genes (internal stop)      :: 18 of 70
            Pseudo Genes (multiple problems)  :: 16 of 70
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1897712
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="YQ003-2014-M1"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCYH010000001-JBJCYH010000029
WGS_SCAFLD  NZ_JBJCYH010000001-NZ_JBJCYH010000029
//
LOCUS       NZ_JBJCXF010000000   1885529 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain XC5-2012, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCXF000000000
VERSION     NZ_JBJCXF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617912
            Assembly: GCF_056156985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1885529)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCXF000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCXF000000000.  This version of the
            project (01) has the accession number NZ_JBJCXF010000000, and
            consists of sequences JBJCXF010000001-JBJCXF010000041.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056156985.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:16:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,876
            CDSs (total)                      :: 1,838
            Genes (coding)                    :: 1,777
            CDSs (with protein)               :: 1,777
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 61
            CDSs (without protein)            :: 61
            Pseudo Genes (ambiguous residues) :: 0 of 61
            Pseudo Genes (frameshifted)       :: 25 of 61
            Pseudo Genes (incomplete)         :: 39 of 61
            Pseudo Genes (internal stop)      :: 18 of 61
            Pseudo Genes (multiple problems)  :: 17 of 61
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1885529
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="XC5-2012"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCXF010000001-JBJCXF010000041
WGS_SCAFLD  NZ_JBJCXF010000001-NZ_JBJCXF010000041
//
LOCUS       NZ_JBJCVH010000000   1848743 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ2503-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCVH000000000
VERSION     NZ_JBJCVH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617962
            Assembly: GCF_056154185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1848743)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCVH000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCVH000000000.  This version of the
            project (01) has the accession number NZ_JBJCVH010000000, and
            consists of sequences JBJCVH010000001-JBJCVH010000045.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154185.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:36:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,831
            CDSs (total)                      :: 1,795
            Genes (coding)                    :: 1,729
            CDSs (with protein)               :: 1,729
            Genes (RNA)                       :: 36
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 66
            CDSs (without protein)            :: 66
            Pseudo Genes (ambiguous residues) :: 0 of 66
            Pseudo Genes (frameshifted)       :: 27 of 66
            Pseudo Genes (incomplete)         :: 42 of 66
            Pseudo Genes (internal stop)      :: 19 of 66
            Pseudo Genes (multiple problems)  :: 18 of 66
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1848743
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ2503-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCVH010000001-JBJCVH010000045
WGS_SCAFLD  NZ_JBJCVH010000001-NZ_JBJCVH010000045
//
LOCUS       NZ_JBJCXB010000000   1845314 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain XCB007-2014, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCXB000000000
VERSION     NZ_JBJCXB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617916
            Assembly: GCF_056156885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1845314)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCXB000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCXB000000000.  This version of the
            project (01) has the accession number NZ_JBJCXB010000000, and
            consists of sequences JBJCXB010000001-JBJCXB010000046.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056156885.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:06:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,825
            CDSs (total)                      :: 1,790
            Genes (coding)                    :: 1,725
            CDSs (with protein)               :: 1,725
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 26 of 65
            Pseudo Genes (incomplete)         :: 44 of 65
            Pseudo Genes (internal stop)      :: 17 of 65
            Pseudo Genes (multiple problems)  :: 18 of 65
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1845314
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="XCB007-2014"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCXB010000001-JBJCXB010000046
WGS_SCAFLD  NZ_JBJCXB010000001-NZ_JBJCXB010000046
//
LOCUS       NZ_JBJCVK010000000   1765999 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ2389-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCVK000000000
VERSION     NZ_JBJCVK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617959
            Assembly: GCF_056154245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1765999)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCVK000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCVK000000000.  This version of the
            project (01) has the accession number NZ_JBJCVK010000000, and
            consists of sequences JBJCVK010000001-JBJCVK010000030.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154245.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:41:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,720
            CDSs (total)                      :: 1,685
            Genes (coding)                    :: 1,627
            CDSs (with protein)               :: 1,627
            Genes (RNA)                       :: 35
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 58
            CDSs (without protein)            :: 58
            Pseudo Genes (ambiguous residues) :: 0 of 58
            Pseudo Genes (frameshifted)       :: 28 of 58
            Pseudo Genes (incomplete)         :: 33 of 58
            Pseudo Genes (internal stop)      :: 17 of 58
            Pseudo Genes (multiple problems)  :: 17 of 58
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1765999
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ2389-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCVK010000001-JBJCVK010000030
WGS_SCAFLD  NZ_JBJCVK010000001-NZ_JBJCVK010000030
//
LOCUS       NZ_JBJCXP010000000   1895999 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ2385-M1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCXP000000000
VERSION     NZ_JBJCXP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617902
            Assembly: GCF_056157185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1895999)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCXP000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCXP000000000.  This version of the
            project (01) has the accession number NZ_JBJCXP010000000, and
            consists of sequences JBJCXP010000001-JBJCXP010000031.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157185.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:28:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,907
            CDSs (total)                      :: 1,872
            Genes (coding)                    :: 1,808
            CDSs (with protein)               :: 1,808
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 33 of 64
            Pseudo Genes (incomplete)         :: 38 of 64
            Pseudo Genes (internal stop)      :: 15 of 64
            Pseudo Genes (multiple problems)  :: 16 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1895999
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ2385-M1"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCXP010000001-JBJCXP010000031
WGS_SCAFLD  NZ_JBJCXP010000001-NZ_JBJCXP010000031
//
LOCUS       NZ_JBJCYB010000000   1887895 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ19SPY7052-M1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCYB000000000
VERSION     NZ_JBJCYB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617890
            Assembly: GCF_056157445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1887895)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCYB000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCYB000000000.  This version of the
            project (01) has the accession number NZ_JBJCYB010000000, and
            consists of sequences JBJCYB010000001-JBJCYB010000025.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157445.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:40:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,893
            CDSs (total)                      :: 1,863
            Genes (coding)                    :: 1,795
            CDSs (with protein)               :: 1,795
            Genes (RNA)                       :: 30
            rRNAs                             :: 1 (23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 25
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 42 of 68
            Pseudo Genes (incomplete)         :: 31 of 68
            Pseudo Genes (internal stop)      :: 14 of 68
            Pseudo Genes (multiple problems)  :: 14 of 68
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1887895
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ19SPY7052-M1"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCYB010000001-JBJCYB010000025
WGS_SCAFLD  NZ_JBJCYB010000001-NZ_JBJCYB010000025
//
LOCUS       NZ_JBJCVU010000000   1857801 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ20spy7004-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCVU000000000
VERSION     NZ_JBJCVU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617949
            Assembly: GCF_056154445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1857801)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCVU000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCVU000000000.  This version of the
            project (01) has the accession number NZ_JBJCVU010000000, and
            consists of sequences JBJCVU010000001-JBJCVU010000038.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154445.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:44:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,835
            CDSs (total)                      :: 1,803
            Genes (coding)                    :: 1,734
            CDSs (with protein)               :: 1,734
            Genes (RNA)                       :: 32
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 25
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 26 of 69
            Pseudo Genes (incomplete)         :: 45 of 69
            Pseudo Genes (internal stop)      :: 20 of 69
            Pseudo Genes (multiple problems)  :: 18 of 69
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1857801
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ20spy7004-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCVU010000001-JBJCVU010000038
WGS_SCAFLD  NZ_JBJCVU010000001-NZ_JBJCVU010000038
//
LOCUS       NZ_JBJCXI010000000   1801447 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain TZ36-2017, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCXI000000000
VERSION     NZ_JBJCXI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617909
            Assembly: GCF_056157045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1801447)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCXI000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCXI000000000.  This version of the
            project (01) has the accession number NZ_JBJCXI010000000, and
            consists of sequences JBJCXI010000001-JBJCXI010000032.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157045.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:16:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,763
            CDSs (total)                      :: 1,744
            Genes (coding)                    :: 1,682
            CDSs (with protein)               :: 1,682
            Genes (RNA)                       :: 19
            tRNAs                             :: 15
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 62
            CDSs (without protein)            :: 62
            Pseudo Genes (ambiguous residues) :: 0 of 62
            Pseudo Genes (frameshifted)       :: 29 of 62
            Pseudo Genes (incomplete)         :: 38 of 62
            Pseudo Genes (internal stop)      :: 15 of 62
            Pseudo Genes (multiple problems)  :: 17 of 62
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1801447
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="TZ36-2017"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCXI010000001-JBJCXI010000032
WGS_SCAFLD  NZ_JBJCXI010000001-NZ_JBJCXI010000032
//
LOCUS       NZ_JBJCVM010000000   1847997 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ2374-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCVM000000000
VERSION     NZ_JBJCVM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617957
            Assembly: GCF_056154285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1847997)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCVM000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCVM000000000.  This version of the
            project (01) has the accession number NZ_JBJCVM010000000, and
            consists of sequences JBJCVM010000001-JBJCVM010000041.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154285.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:40:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,835
            CDSs (total)                      :: 1,793
            Genes (coding)                    :: 1,724
            CDSs (with protein)               :: 1,724
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 35
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 45 of 69
            Pseudo Genes (internal stop)      :: 18 of 69
            Pseudo Genes (multiple problems)  :: 18 of 69
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1847997
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ2374-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCVM010000001-JBJCVM010000041
WGS_SCAFLD  NZ_JBJCVM010000001-NZ_JBJCVM010000041
//
LOCUS       NZ_JBJCXW010000000   1898455 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ20SPY7001-M1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCXW000000000
VERSION     NZ_JBJCXW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617895
            Assembly: GCF_056157325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1898455)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCXW000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCXW000000000.  This version of the
            project (01) has the accession number NZ_JBJCXW010000000, and
            consists of sequences JBJCXW010000001-JBJCXW010000025.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157325.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:40:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,915
            CDSs (total)                      :: 1,872
            Genes (coding)                    :: 1,809
            CDSs (with protein)               :: 1,809
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 36
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 33 of 63
            Pseudo Genes (incomplete)         :: 34 of 63
            Pseudo Genes (internal stop)      :: 18 of 63
            Pseudo Genes (multiple problems)  :: 16 of 63
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1898455
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ20SPY7001-M1"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCXW010000001-JBJCXW010000025
WGS_SCAFLD  NZ_JBJCXW010000001-NZ_JBJCXW010000025
//
LOCUS       NZ_JBJCWB010000000   1847961 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ19spy7059-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCWB000000000
VERSION     NZ_JBJCWB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617942
            Assembly: GCF_056154565.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1847961)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCWB000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCWB000000000.  This version of the
            project (01) has the accession number NZ_JBJCWB010000000, and
            consists of sequences JBJCWB010000001-JBJCWB010000043.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154565.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:39:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,834
            CDSs (total)                      :: 1,792
            Genes (coding)                    :: 1,727
            CDSs (with protein)               :: 1,727
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 35
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 26 of 65
            Pseudo Genes (incomplete)         :: 44 of 65
            Pseudo Genes (internal stop)      :: 17 of 65
            Pseudo Genes (multiple problems)  :: 18 of 65
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1847961
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ19spy7059-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCWB010000001-JBJCWB010000043
WGS_SCAFLD  NZ_JBJCWB010000001-NZ_JBJCWB010000043
//
LOCUS       NZ_JBJCWD010000000   1849726 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ19spy7055-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCWD000000000
VERSION     NZ_JBJCWD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617940
            Assembly: GCF_056154625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1849726)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCWD000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCWD000000000.  This version of the
            project (01) has the accession number NZ_JBJCWD010000000, and
            consists of sequences JBJCWD010000001-JBJCWD010000045.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154625.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:44:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,842
            CDSs (total)                      :: 1,802
            Genes (coding)                    :: 1,732
            CDSs (with protein)               :: 1,732
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 27 of 70
            Pseudo Genes (incomplete)         :: 47 of 70
            Pseudo Genes (internal stop)      :: 18 of 70
            Pseudo Genes (multiple problems)  :: 18 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1849726
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ19spy7055-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCWD010000001-JBJCWD010000045
WGS_SCAFLD  NZ_JBJCWD010000001-NZ_JBJCWD010000045
//
LOCUS       NZ_JBJCWH010000000   1804588 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ19SPY7025-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCWH000000000
VERSION     NZ_JBJCWH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617936
            Assembly: GCF_056154685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1804588)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCWH000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCWH000000000.  This version of the
            project (01) has the accession number NZ_JBJCWH010000000, and
            consists of sequences JBJCWH010000001-JBJCWH010000035.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154685.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:46:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,773
            CDSs (total)                      :: 1,744
            Genes (coding)                    :: 1,679
            CDSs (with protein)               :: 1,679
            Genes (RNA)                       :: 29
            tRNAs                             :: 25
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 31 of 65
            Pseudo Genes (incomplete)         :: 38 of 65
            Pseudo Genes (internal stop)      :: 16 of 65
            Pseudo Genes (multiple problems)  :: 17 of 65
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1804588
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ19SPY7025-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCWH010000001-JBJCWH010000035
WGS_SCAFLD  NZ_JBJCWH010000001-NZ_JBJCWH010000035
//
LOCUS       NZ_JBJCYG010000000   1901881 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain YQ005-2014-M1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCYG000000000
VERSION     NZ_JBJCYG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617885
            Assembly: GCF_056157525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1901881)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCYG000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCYG000000000.  This version of the
            project (01) has the accession number NZ_JBJCYG010000000, and
            consists of sequences JBJCYG010000001-JBJCYG010000029.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157525.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:40:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,921
            CDSs (total)                      :: 1,877
            Genes (coding)                    :: 1,806
            CDSs (with protein)               :: 1,806
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 32 of 71
            Pseudo Genes (incomplete)         :: 42 of 71
            Pseudo Genes (internal stop)      :: 19 of 71
            Pseudo Genes (multiple problems)  :: 16 of 71
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1901881
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="YQ005-2014-M1"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCYG010000001-JBJCYG010000029
WGS_SCAFLD  NZ_JBJCYG010000001-NZ_JBJCYG010000029
//
LOCUS       NZ_JBJCWM010000000   1882627 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain YQ7-2012, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCWM000000000
VERSION     NZ_JBJCWM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617931
            Assembly: GCF_056154825.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1882627)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCWM000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCWM000000000.  This version of the
            project (01) has the accession number NZ_JBJCWM010000000, and
            consists of sequences JBJCWM010000001-JBJCWM010000047.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154825.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:41:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,892
            CDSs (total)                      :: 1,850
            Genes (coding)                    :: 1,789
            CDSs (with protein)               :: 1,789
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 35
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 61
            CDSs (without protein)            :: 61
            Pseudo Genes (ambiguous residues) :: 0 of 61
            Pseudo Genes (frameshifted)       :: 23 of 61
            Pseudo Genes (incomplete)         :: 40 of 61
            Pseudo Genes (internal stop)      :: 19 of 61
            Pseudo Genes (multiple problems)  :: 17 of 61
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1882627
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="YQ7-2012"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCWM010000001-JBJCWM010000047
WGS_SCAFLD  NZ_JBJCWM010000001-NZ_JBJCWM010000047
//
LOCUS       NZ_JBJCWJ010000000   1765797 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ19SPY7003-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCWJ000000000
VERSION     NZ_JBJCWJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617934
            Assembly: GCF_056154765.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1765797)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCWJ000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCWJ000000000.  This version of the
            project (01) has the accession number NZ_JBJCWJ010000000, and
            consists of sequences JBJCWJ010000001-JBJCWJ010000027.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154765.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:45:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,712
            CDSs (total)                      :: 1,689
            Genes (coding)                    :: 1,634
            CDSs (with protein)               :: 1,634
            Genes (RNA)                       :: 23
            tRNAs                             :: 19
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 55
            CDSs (without protein)            :: 55
            Pseudo Genes (ambiguous residues) :: 0 of 55
            Pseudo Genes (frameshifted)       :: 26 of 55
            Pseudo Genes (incomplete)         :: 34 of 55
            Pseudo Genes (internal stop)      :: 15 of 55
            Pseudo Genes (multiple problems)  :: 17 of 55
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1765797
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ19SPY7003-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCWJ010000001-JBJCWJ010000027
WGS_SCAFLD  NZ_JBJCWJ010000001-NZ_JBJCWJ010000027
//
LOCUS       NZ_JBJCXH010000000   1849258 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain WTG19-2014, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCXH000000000
VERSION     NZ_JBJCXH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617910
            Assembly: GCF_056157025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1849258)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCXH000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCXH000000000.  This version of the
            project (01) has the accession number NZ_JBJCXH010000000, and
            consists of sequences JBJCXH010000001-JBJCXH010000043.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157025.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:17:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,833
            CDSs (total)                      :: 1,793
            Genes (coding)                    :: 1,729
            CDSs (with protein)               :: 1,729
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 27 of 64
            Pseudo Genes (incomplete)         :: 41 of 64
            Pseudo Genes (internal stop)      :: 18 of 64
            Pseudo Genes (multiple problems)  :: 18 of 64
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1849258
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="WTG19-2014"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCXH010000001-JBJCXH010000043
WGS_SCAFLD  NZ_JBJCXH010000001-NZ_JBJCXH010000043
//
LOCUS       NZ_JBJCXE010000000   1819663 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain XC8-2017, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCXE000000000
VERSION     NZ_JBJCXE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617913
            Assembly: GCF_056156965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1819663)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCXE000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCXE000000000.  This version of the
            project (01) has the accession number NZ_JBJCXE010000000, and
            consists of sequences JBJCXE010000001-JBJCXE010000035.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056156965.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:13:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,791
            CDSs (total)                      :: 1,747
            Genes (coding)                    :: 1,687
            CDSs (with protein)               :: 1,687
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 60
            CDSs (without protein)            :: 60
            Pseudo Genes (ambiguous residues) :: 0 of 60
            Pseudo Genes (frameshifted)       :: 28 of 60
            Pseudo Genes (incomplete)         :: 36 of 60
            Pseudo Genes (internal stop)      :: 19 of 60
            Pseudo Genes (multiple problems)  :: 19 of 60
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1819663
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="XC8-2017"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCXE010000001-JBJCXE010000035
WGS_SCAFLD  NZ_JBJCXE010000001-NZ_JBJCXE010000035
//
LOCUS       NZ_JBJCWR010000000   1849223 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain XCN004-2014, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCWR000000000
VERSION     NZ_JBJCWR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617926
            Assembly: GCF_056154905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1849223)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCWR000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCWR000000000.  This version of the
            project (01) has the accession number NZ_JBJCWR010000000, and
            consists of sequences JBJCWR010000001-JBJCWR010000043.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154905.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:43:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,840
            CDSs (total)                      :: 1,796
            Genes (coding)                    :: 1,730
            CDSs (with protein)               :: 1,730
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 66
            CDSs (without protein)            :: 66
            Pseudo Genes (ambiguous residues) :: 0 of 66
            Pseudo Genes (frameshifted)       :: 27 of 66
            Pseudo Genes (incomplete)         :: 43 of 66
            Pseudo Genes (internal stop)      :: 18 of 66
            Pseudo Genes (multiple problems)  :: 18 of 66
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1849223
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="XCN004-2014"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCWR010000001-JBJCWR010000043
WGS_SCAFLD  NZ_JBJCWR010000001-NZ_JBJCWR010000043
//
LOCUS       NZ_JBJCWC010000000   1849145 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ19spy7056-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCWC000000000
VERSION     NZ_JBJCWC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617941
            Assembly: GCF_056154605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1849145)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCWC000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCWC000000000.  This version of the
            project (01) has the accession number NZ_JBJCWC010000000, and
            consists of sequences JBJCWC010000001-JBJCWC010000044.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154605.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:45:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,835
            CDSs (total)                      :: 1,795
            Genes (coding)                    :: 1,731
            CDSs (with protein)               :: 1,731
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 26 of 64
            Pseudo Genes (incomplete)         :: 42 of 64
            Pseudo Genes (internal stop)      :: 18 of 64
            Pseudo Genes (multiple problems)  :: 18 of 64
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1849145
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ19spy7056-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCWC010000001-JBJCWC010000044
WGS_SCAFLD  NZ_JBJCWC010000001-NZ_JBJCWC010000044
//
LOCUS       NZ_JBJCXR010000000   1858183 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ20SPY7013-M1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCXR000000000
VERSION     NZ_JBJCXR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617900
            Assembly: GCF_056157225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1858183)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCXR000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCXR000000000.  This version of the
            project (01) has the accession number NZ_JBJCXR010000000, and
            consists of sequences JBJCXR010000001-JBJCXR010000025.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157225.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:28:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,860
            CDSs (total)                      :: 1,816
            Genes (coding)                    :: 1,751
            CDSs (with protein)               :: 1,751
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 36
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 35 of 65
            Pseudo Genes (incomplete)         :: 37 of 65
            Pseudo Genes (internal stop)      :: 17 of 65
            Pseudo Genes (multiple problems)  :: 18 of 65
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1858183
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ20SPY7013-M1"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCXR010000001-JBJCXR010000025
WGS_SCAFLD  NZ_JBJCXR010000001-NZ_JBJCXR010000025
//
LOCUS       NZ_JBJCVF010000000   1847017 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ2992-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCVF000000000
VERSION     NZ_JBJCVF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617964
            Assembly: GCF_056154145.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1847017)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCVF000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCVF000000000.  This version of the
            project (01) has the accession number NZ_JBJCVF010000000, and
            consists of sequences JBJCVF010000001-JBJCVF010000045.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154145.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:41:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,831
            CDSs (total)                      :: 1,792
            Genes (coding)                    :: 1,726
            CDSs (with protein)               :: 1,726
            Genes (RNA)                       :: 39
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 66
            CDSs (without protein)            :: 66
            Pseudo Genes (ambiguous residues) :: 0 of 66
            Pseudo Genes (frameshifted)       :: 26 of 66
            Pseudo Genes (incomplete)         :: 44 of 66
            Pseudo Genes (internal stop)      :: 18 of 66
            Pseudo Genes (multiple problems)  :: 18 of 66
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1847017
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ2992-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCVF010000001-JBJCVF010000045
WGS_SCAFLD  NZ_JBJCVF010000001-NZ_JBJCVF010000045
//
LOCUS       NZ_JBJCWS010000000   1846506 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain XCN001-2013, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCWS000000000
VERSION     NZ_JBJCWS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617925
            Assembly: GCF_056154925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1846506)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCWS000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCWS000000000.  This version of the
            project (01) has the accession number NZ_JBJCWS010000000, and
            consists of sequences JBJCWS010000001-JBJCWS010000050.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154925.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:42:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,836
            CDSs (total)                      :: 1,793
            Genes (coding)                    :: 1,726
            CDSs (with protein)               :: 1,726
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 36
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 26 of 67
            Pseudo Genes (incomplete)         :: 46 of 67
            Pseudo Genes (internal stop)      :: 17 of 67
            Pseudo Genes (multiple problems)  :: 18 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1846506
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="XCN001-2013"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCWS010000001-JBJCWS010000050
WGS_SCAFLD  NZ_JBJCWS010000001-NZ_JBJCWS010000050
//
LOCUS       NZ_JBJCVT010000000   1848493 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ20spy7007-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCVT000000000
VERSION     NZ_JBJCVT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617950
            Assembly: GCF_056154425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1848493)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCVT000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCVT000000000.  This version of the
            project (01) has the accession number NZ_JBJCVT010000000, and
            consists of sequences JBJCVT010000001-JBJCVT010000044.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154425.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:40:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,831
            CDSs (total)                      :: 1,796
            Genes (coding)                    :: 1,729
            CDSs (with protein)               :: 1,729
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 27 of 67
            Pseudo Genes (incomplete)         :: 43 of 67
            Pseudo Genes (internal stop)      :: 19 of 67
            Pseudo Genes (multiple problems)  :: 18 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1848493
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ20spy7007-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCVT010000001-JBJCVT010000044
WGS_SCAFLD  NZ_JBJCVT010000001-NZ_JBJCVT010000044
//
LOCUS       NZ_JBJCWG010000000   1801846 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ19SPY7030-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCWG000000000
VERSION     NZ_JBJCWG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617937
            Assembly: GCF_056154705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1801846)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCWG000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCWG000000000.  This version of the
            project (01) has the accession number NZ_JBJCWG010000000, and
            consists of sequences JBJCWG010000001-JBJCWG010000033.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154705.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:45:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,767
            CDSs (total)                      :: 1,738
            Genes (coding)                    :: 1,681
            CDSs (with protein)               :: 1,681
            Genes (RNA)                       :: 29
            tRNAs                             :: 25
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 57
            CDSs (without protein)            :: 57
            Pseudo Genes (ambiguous residues) :: 0 of 57
            Pseudo Genes (frameshifted)       :: 26 of 57
            Pseudo Genes (incomplete)         :: 36 of 57
            Pseudo Genes (internal stop)      :: 15 of 57
            Pseudo Genes (multiple problems)  :: 17 of 57
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1801846
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ19SPY7030-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCWG010000001-JBJCWG010000033
WGS_SCAFLD  NZ_JBJCWG010000001-NZ_JBJCWG010000033
//
LOCUS       NZ_JBJCXC010000000   1870300 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain XCB007-2013, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCXC000000000
VERSION     NZ_JBJCXC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617915
            Assembly: GCF_056156925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1870300)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCXC000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCXC000000000.  This version of the
            project (01) has the accession number NZ_JBJCXC010000000, and
            consists of sequences JBJCXC010000001-JBJCXC010000041.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056156925.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:16:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,866
            CDSs (total)                      :: 1,819
            Genes (coding)                    :: 1,759
            CDSs (with protein)               :: 1,759
            Genes (RNA)                       :: 47
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 60
            CDSs (without protein)            :: 60
            Pseudo Genes (ambiguous residues) :: 0 of 60
            Pseudo Genes (frameshifted)       :: 24 of 60
            Pseudo Genes (incomplete)         :: 36 of 60
            Pseudo Genes (internal stop)      :: 21 of 60
            Pseudo Genes (multiple problems)  :: 17 of 60
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1870300
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="XCB007-2013"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCXC010000001-JBJCXC010000041
WGS_SCAFLD  NZ_JBJCXC010000001-NZ_JBJCXC010000041
//
LOCUS       NZ_JBJCWQ010000000   1842789 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain XCN4-2013, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCWQ000000000
VERSION     NZ_JBJCWQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617927
            Assembly: GCF_056154865.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1842789)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCWQ000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCWQ000000000.  This version of the
            project (01) has the accession number NZ_JBJCWQ010000000, and
            consists of sequences JBJCWQ010000001-JBJCWQ010000047.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154865.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:45:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,829
            CDSs (total)                      :: 1,787
            Genes (coding)                    :: 1,724
            CDSs (with protein)               :: 1,724
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 35
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 25 of 63
            Pseudo Genes (incomplete)         :: 43 of 63
            Pseudo Genes (internal stop)      :: 17 of 63
            Pseudo Genes (multiple problems)  :: 18 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1842789
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="XCN4-2013"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCWQ010000001-JBJCWQ010000047
WGS_SCAFLD  NZ_JBJCWQ010000001-NZ_JBJCWQ010000047
//
LOCUS       NZ_AHSS01000000      1980457 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus mutans ST1, whole genome shotgun sequencing project.
ACCESSION   NZ_AHSS00000000
VERSION     NZ_AHSS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02429067
            Assembly: GCF_000340035.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus mutans ST1
  ORGANISM  Streptococcus mutans ST1
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1980457)
  AUTHORS   Cornejo,O.E., Lefebure,T., Bitar,P.D., Lang,P., Richards,V.P.,
            Eilertson,K., Do,T., Beighton,D., Zeng,L., Ahn,S.J., Burne,R.A.,
            Siepel,A., Bustamante,C.D. and Stanhope,M.J.
  TITLE     Evolutionary and population genomics of the cavity causing bacteria
            Streptococcus mutans
  JOURNAL   Mol Biol Evol 30 (4), 881-893 (2013)
   PUBMED   23228887
REFERENCE   2  (bases 1 to 1980457)
  AUTHORS   Lefebure,T., Suzuki,H., Pavinski Bitar,P.D., Burne,R.A. and
            Stanhope,M.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-JUL-2010) Population Medicine and Diagnostic
            Sciences, Cornell University, Ithaca, NY 14853, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AHSS00000000.1.
            The Streptococcus mutans ST1 whole genome shotgun (WGS) project has
            the project accession NZ_AHSS00000000.  This version of the project
            (01) has the accession number NZ_AHSS01000000, and consists of
            sequences AHSS01000001-AHSS01000131.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 0.7.55
            Genome Coverage       :: 50x
            Sequencing Technology :: Illumina GAII single end reads
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000340035.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:17:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,975
            CDSs (total)                      :: 1,940
            Genes (coding)                    :: 1,854
            CDSs (with protein)               :: 1,854
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 86
            CDSs (without protein)            :: 86
            Pseudo Genes (ambiguous residues) :: 0 of 86
            Pseudo Genes (frameshifted)       :: 36 of 86
            Pseudo Genes (incomplete)         :: 49 of 86
            Pseudo Genes (internal stop)      :: 28 of 86
            Pseudo Genes (multiple problems)  :: 23 of 86
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1980457
                     /organism="Streptococcus mutans ST1"
                     /mol_type="genomic DNA"
                     /strain="ST1"
                     /isolation_source="oral cavity"
                     /host="Homo sapiens"
                     /db_xref="taxon:857118"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2006"
WGS         AHSS01000001-AHSS01000131
WGS_SCAFLD  NZ_AHSS01000001-NZ_AHSS01000131
//
LOCUS       NZ_JBJCVJ010000000   1849722 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ2404-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCVJ000000000
VERSION     NZ_JBJCVJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617960
            Assembly: GCF_056154225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1849722)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCVJ000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCVJ000000000.  This version of the
            project (01) has the accession number NZ_JBJCVJ010000000, and
            consists of sequences JBJCVJ010000001-JBJCVJ010000045.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154225.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:38:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,845
            CDSs (total)                      :: 1,798
            Genes (coding)                    :: 1,733
            CDSs (with protein)               :: 1,733
            Genes (RNA)                       :: 47
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 26 of 65
            Pseudo Genes (incomplete)         :: 43 of 65
            Pseudo Genes (internal stop)      :: 18 of 65
            Pseudo Genes (multiple problems)  :: 18 of 65
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1849722
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ2404-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCVJ010000001-JBJCVJ010000045
WGS_SCAFLD  NZ_JBJCVJ010000001-NZ_JBJCVJ010000045
//
LOCUS       NZ_JBJCWT010000000   1845616 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain XCB6-2012, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCWT000000000
VERSION     NZ_JBJCWT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617924
            Assembly: GCF_056154945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1845616)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCWT000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCWT000000000.  This version of the
            project (01) has the accession number NZ_JBJCWT010000000, and
            consists of sequences JBJCWT010000001-JBJCWT010000042.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154945.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:45:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,834
            CDSs (total)                      :: 1,791
            Genes (coding)                    :: 1,724
            CDSs (with protein)               :: 1,724
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 36
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 26 of 67
            Pseudo Genes (incomplete)         :: 46 of 67
            Pseudo Genes (internal stop)      :: 17 of 67
            Pseudo Genes (multiple problems)  :: 18 of 67
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1845616
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="XCB6-2012"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCWT010000001-JBJCWT010000042
WGS_SCAFLD  NZ_JBJCWT010000001-NZ_JBJCWT010000042
//
LOCUS       NZ_AHRF01000000      1925888 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus mutans SF12, whole genome shotgun sequencing project.
ACCESSION   NZ_AHRF00000000
VERSION     NZ_AHRF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02429033
            Assembly: GCF_000339095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus mutans SF12
  ORGANISM  Streptococcus mutans SF12
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1925888)
  AUTHORS   Cornejo,O.E., Lefebure,T., Bitar,P.D., Lang,P., Richards,V.P.,
            Eilertson,K., Do,T., Beighton,D., Zeng,L., Ahn,S.J., Burne,R.A.,
            Siepel,A., Bustamante,C.D. and Stanhope,M.J.
  TITLE     Evolutionary and population genomics of the cavity causing bacteria
            Streptococcus mutans
  JOURNAL   Mol Biol Evol 30 (4), 881-893 (2013)
   PUBMED   23228887
REFERENCE   2  (bases 1 to 1925888)
  AUTHORS   Lefebure,T., Suzuki,H., Pavinski Bitar,P.D., Burne,R.A. and
            Stanhope,M.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-JUL-2010) Population Medicine and Diagnostic
            Sciences, Cornell University, Ithaca, NY 14853, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AHRF00000000.1.
            The Streptococcus mutans SF12 whole genome shotgun (WGS) project
            has the project accession NZ_AHRF00000000.  This version of the
            project (01) has the accession number NZ_AHRF01000000, and consists
            of sequences AHRF01000001-AHRF01000107.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 0.7.55
            Genome Coverage       :: 50x
            Sequencing Technology :: Illumina GAII single end reads
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000339095.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:16:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,929
            CDSs (total)                      :: 1,894
            Genes (coding)                    :: 1,833
            CDSs (with protein)               :: 1,833
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 61
            CDSs (without protein)            :: 61
            Pseudo Genes (ambiguous residues) :: 0 of 61
            Pseudo Genes (frameshifted)       :: 35 of 61
            Pseudo Genes (incomplete)         :: 33 of 61
            Pseudo Genes (internal stop)      :: 17 of 61
            Pseudo Genes (multiple problems)  :: 18 of 61
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1925888
                     /organism="Streptococcus mutans SF12"
                     /mol_type="genomic DNA"
                     /strain="SF12"
                     /isolation_source="oral cavity"
                     /host="Homo sapiens"
                     /db_xref="taxon:857102"
                     /geo_loc_name="USA"
                     /collection_date="2001"
WGS         AHRF01000001-AHRF01000107
WGS_SCAFLD  NZ_AHRF01000001-NZ_AHRF01000107
//
LOCUS       NZ_JBJCVP010000000   1847830 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ2349-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCVP000000000
VERSION     NZ_JBJCVP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617954
            Assembly: GCF_056154345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1847830)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCVP000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCVP000000000.  This version of the
            project (01) has the accession number NZ_JBJCVP010000000, and
            consists of sequences JBJCVP010000001-JBJCVP010000041.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154345.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:42:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,835
            CDSs (total)                      :: 1,795
            Genes (coding)                    :: 1,727
            CDSs (with protein)               :: 1,727
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 26 of 68
            Pseudo Genes (incomplete)         :: 45 of 68
            Pseudo Genes (internal stop)      :: 19 of 68
            Pseudo Genes (multiple problems)  :: 18 of 68
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1847830
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ2349-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCVP010000001-JBJCVP010000041
WGS_SCAFLD  NZ_JBJCVP010000001-NZ_JBJCVP010000041
//
LOCUS       NZ_JBJCWF010000000   1803606 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ19SPY7042-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCWF000000000
VERSION     NZ_JBJCWF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617938
            Assembly: GCF_056154665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1803606)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCWF000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCWF000000000.  This version of the
            project (01) has the accession number NZ_JBJCWF010000000, and
            consists of sequences JBJCWF010000001-JBJCWF010000031.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154665.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:42:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,778
            CDSs (total)                      :: 1,746
            Genes (coding)                    :: 1,685
            CDSs (with protein)               :: 1,685
            Genes (RNA)                       :: 32
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 61
            CDSs (without protein)            :: 61
            Pseudo Genes (ambiguous residues) :: 0 of 61
            Pseudo Genes (frameshifted)       :: 28 of 61
            Pseudo Genes (incomplete)         :: 40 of 61
            Pseudo Genes (internal stop)      :: 16 of 61
            Pseudo Genes (multiple problems)  :: 19 of 61
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1803606
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ19SPY7042-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCWF010000001-JBJCWF010000031
WGS_SCAFLD  NZ_JBJCWF010000001-NZ_JBJCWF010000031
//
LOCUS       NZ_AHSK01000000      1930238 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus mutans M2A, whole genome shotgun sequencing project.
ACCESSION   NZ_AHSK00000000
VERSION     NZ_AHSK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02428988
            Assembly: GCF_000339935.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus mutans M2A
  ORGANISM  Streptococcus mutans M2A
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1930238)
  AUTHORS   Cornejo,O.E., Lefebure,T., Bitar,P.D., Lang,P., Richards,V.P.,
            Eilertson,K., Do,T., Beighton,D., Zeng,L., Ahn,S.J., Burne,R.A.,
            Siepel,A., Bustamante,C.D. and Stanhope,M.J.
  TITLE     Evolutionary and population genomics of the cavity causing bacteria
            Streptococcus mutans
  JOURNAL   Mol Biol Evol 30 (4), 881-893 (2013)
   PUBMED   23228887
REFERENCE   2  (bases 1 to 1930238)
  AUTHORS   Lefebure,T., Suzuki,H., Pavinski Bitar,P.D., Burne,R.A. and
            Stanhope,M.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-JUL-2010) Population Medicine and Diagnostic
            Sciences, Cornell University, Ithaca, NY 14853, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AHSK00000000.1.
            The Streptococcus mutans M2A whole genome shotgun (WGS) project has
            the project accession NZ_AHSK00000000.  This version of the project
            (01) has the accession number NZ_AHSK01000000, and consists of
            sequences AHSK01000001-AHSK01000115.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 0.7.55
            Genome Coverage       :: 50x
            Sequencing Technology :: Illumina GAII single end reads
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000339935.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:19:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,935
            CDSs (total)                      :: 1,900
            Genes (coding)                    :: 1,834
            CDSs (with protein)               :: 1,834
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 66
            CDSs (without protein)            :: 66
            Pseudo Genes (ambiguous residues) :: 0 of 66
            Pseudo Genes (frameshifted)       :: 26 of 66
            Pseudo Genes (incomplete)         :: 43 of 66
            Pseudo Genes (internal stop)      :: 20 of 66
            Pseudo Genes (multiple problems)  :: 19 of 66
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1930238
                     /organism="Streptococcus mutans M2A"
                     /mol_type="genomic DNA"
                     /strain="M2A"
                     /isolation_source="oral cavity"
                     /host="Homo sapiens"
                     /db_xref="taxon:857126"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2006"
WGS         AHSK01000001-AHSK01000115
WGS_SCAFLD  NZ_AHSK01000001-NZ_AHSK01000115
//
LOCUS       NZ_JBJCVC010000000   1848726 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ3044-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCVC000000000
VERSION     NZ_JBJCVC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617967
            Assembly: GCF_056154085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1848726)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCVC000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCVC000000000.  This version of the
            project (01) has the accession number NZ_JBJCVC010000000, and
            consists of sequences JBJCVC010000001-JBJCVC010000044.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154085.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:41:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,832
            CDSs (total)                      :: 1,792
            Genes (coding)                    :: 1,723
            CDSs (with protein)               :: 1,723
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 30 of 69
            Pseudo Genes (incomplete)         :: 43 of 69
            Pseudo Genes (internal stop)      :: 18 of 69
            Pseudo Genes (multiple problems)  :: 18 of 69
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1848726
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ3044-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCVC010000001-JBJCVC010000044
WGS_SCAFLD  NZ_JBJCVC010000001-NZ_JBJCVC010000044
//
LOCUS       NZ_JBJCVB010000000   1859988 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain ZJ3081-M12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCVB000000000
VERSION     NZ_JBJCVB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617968
            Assembly: GCF_056154045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1859988)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCVB000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCVB000000000.  This version of the
            project (01) has the accession number NZ_JBJCVB010000000, and
            consists of sequences JBJCVB010000001-JBJCVB010000039.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056154045.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:38:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,846
            CDSs (total)                      :: 1,803
            Genes (coding)                    :: 1,737
            CDSs (with protein)               :: 1,737
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 36
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 66
            CDSs (without protein)            :: 66
            Pseudo Genes (ambiguous residues) :: 0 of 66
            Pseudo Genes (frameshifted)       :: 27 of 66
            Pseudo Genes (incomplete)         :: 43 of 66
            Pseudo Genes (internal stop)      :: 18 of 66
            Pseudo Genes (multiple problems)  :: 18 of 66
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1859988
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="ZJ3081-M12"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCVB010000001-JBJCVB010000039
WGS_SCAFLD  NZ_JBJCVB010000001-NZ_JBJCVB010000039
//
LOCUS       NZ_AHRV01000000      1990978 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus mutans NFSM2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AHRV00000000
VERSION     NZ_AHRV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02428986
            Assembly: GCF_000339295.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus mutans NFSM2
  ORGANISM  Streptococcus mutans NFSM2
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1990978)
  AUTHORS   Cornejo,O.E., Lefebure,T., Bitar,P.D., Lang,P., Richards,V.P.,
            Eilertson,K., Do,T., Beighton,D., Zeng,L., Ahn,S.J., Burne,R.A.,
            Siepel,A., Bustamante,C.D. and Stanhope,M.J.
  TITLE     Evolutionary and population genomics of the cavity causing bacteria
            Streptococcus mutans
  JOURNAL   Mol Biol Evol 30 (4), 881-893 (2013)
   PUBMED   23228887
REFERENCE   2  (bases 1 to 1990978)
  AUTHORS   Lefebure,T., Suzuki,H., Pavinski Bitar,P.D., Burne,R.A. and
            Stanhope,M.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2010) Population Medicine and Diagnostic
            Sciences, Cornell University, Ithaca, NY 14853, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AHRV00000000.1.
            The Streptococcus mutans NFSM2 whole genome shotgun (WGS) project
            has the project accession NZ_AHRV00000000.  This version of the
            project (01) has the accession number NZ_AHRV01000000, and consists
            of sequences AHRV01000001-AHRV01000115.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 0.7.55
            Genome Coverage       :: 50x
            Sequencing Technology :: Illumina GAII single end reads
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000339295.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:21:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,961
            CDSs (total)                      :: 1,926
            Genes (coding)                    :: 1,850
            CDSs (with protein)               :: 1,850
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 38 of 76
            Pseudo Genes (incomplete)         :: 40 of 76
            Pseudo Genes (internal stop)      :: 26 of 76
            Pseudo Genes (multiple problems)  :: 23 of 76
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1990978
                     /organism="Streptococcus mutans NFSM2"
                     /mol_type="genomic DNA"
                     /strain="NFSM2"
                     /isolation_source="oral cavity"
                     /host="Homo sapiens"
                     /db_xref="taxon:857141"
                     /geo_loc_name="United Kingdom"
                     /collection_date="1994"
WGS         AHRV01000001-AHRV01000115
WGS_SCAFLD  NZ_AHRV01000001-NZ_AHRV01000115
//
LOCUS       NZ_AHSI01000000      1941389 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus mutans NLML5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AHSI00000000
VERSION     NZ_AHSI00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02428932
            Assembly: GCF_000339895.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus mutans NLML5
  ORGANISM  Streptococcus mutans NLML5
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1941389)
  AUTHORS   Cornejo,O.E., Lefebure,T., Bitar,P.D., Lang,P., Richards,V.P.,
            Eilertson,K., Do,T., Beighton,D., Zeng,L., Ahn,S.J., Burne,R.A.,
            Siepel,A., Bustamante,C.D. and Stanhope,M.J.
  TITLE     Evolutionary and population genomics of the cavity causing bacteria
            Streptococcus mutans
  JOURNAL   Mol Biol Evol 30 (4), 881-893 (2013)
   PUBMED   23228887
REFERENCE   2  (bases 1 to 1941389)
  AUTHORS   Lefebure,T., Suzuki,H., Pavinski Bitar,P.D., Burne,R.A. and
            Stanhope,M.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-JUL-2010) Population Medicine and Diagnostic
            Sciences, Cornell University, Ithaca, NY 14853, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AHSI00000000.1.
            The Streptococcus mutans NLML5 whole genome shotgun (WGS) project
            has the project accession NZ_AHSI00000000.  This version of the
            project (01) has the accession number NZ_AHSI01000000, and consists
            of sequences AHSI01000001-AHSI01000105.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 0.7.55
            Genome Coverage       :: 50x
            Sequencing Technology :: Illumina GAII single end reads
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000339895.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:20:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,908
            CDSs (total)                      :: 1,873
            Genes (coding)                    :: 1,794
            CDSs (with protein)               :: 1,794
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 79
            CDSs (without protein)            :: 79
            Pseudo Genes (ambiguous residues) :: 0 of 79
            Pseudo Genes (frameshifted)       :: 34 of 79
            Pseudo Genes (incomplete)         :: 44 of 79
            Pseudo Genes (internal stop)      :: 18 of 79
            Pseudo Genes (multiple problems)  :: 14 of 79
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1941389
                     /organism="Streptococcus mutans NLML5"
                     /mol_type="genomic DNA"
                     /strain="NLML5"
                     /isolation_source="oral cavity"
                     /host="Homo sapiens"
                     /db_xref="taxon:857128"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2001"
WGS         AHSI01000001-AHSI01000105
WGS_SCAFLD  NZ_AHSI01000001-NZ_AHSI01000105
//
LOCUS       NZ_AHSB01000000      1991956 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus mutans U138, whole genome shotgun sequencing project.
ACCESSION   NZ_AHSB00000000
VERSION     NZ_AHSB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02429074
            Assembly: GCF_000339795.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus mutans U138
  ORGANISM  Streptococcus mutans U138
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1991956)
  AUTHORS   Cornejo,O.E., Lefebure,T., Bitar,P.D., Lang,P., Richards,V.P.,
            Eilertson,K., Do,T., Beighton,D., Zeng,L., Ahn,S.J., Burne,R.A.,
            Siepel,A., Bustamante,C.D. and Stanhope,M.J.
  TITLE     Evolutionary and population genomics of the cavity causing bacteria
            Streptococcus mutans
  JOURNAL   Mol Biol Evol 30 (4), 881-893 (2013)
   PUBMED   23228887
REFERENCE   2  (bases 1 to 1991956)
  AUTHORS   Lefebure,T., Suzuki,H., Pavinski Bitar,P.D., Burne,R.A. and
            Stanhope,M.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2010) Population Medicine and Diagnostic
            Sciences, Cornell University, Ithaca, NY 14853, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AHSB00000000.1.
            The Streptococcus mutans U138 whole genome shotgun (WGS) project
            has the project accession NZ_AHSB00000000.  This version of the
            project (01) has the accession number NZ_AHSB01000000, and consists
            of sequences AHSB01000001-AHSB01000153.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 0.7.55
            Genome Coverage       :: 50x
            Sequencing Technology :: Illumina GAII single end reads
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000339795.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:20:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,977
            CDSs (total)                      :: 1,934
            Genes (coding)                    :: 1,855
            CDSs (with protein)               :: 1,855
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 4, 7 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 4, 7 (5S, 16S, 23S)
            tRNAs                             :: 27
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 79
            CDSs (without protein)            :: 79
            Pseudo Genes (ambiguous residues) :: 0 of 79
            Pseudo Genes (frameshifted)       :: 42 of 79
            Pseudo Genes (incomplete)         :: 40 of 79
            Pseudo Genes (internal stop)      :: 24 of 79
            Pseudo Genes (multiple problems)  :: 22 of 79
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1991956
                     /organism="Streptococcus mutans U138"
                     /mol_type="genomic DNA"
                     /strain="U138"
                     /isolation_source="oral cavity"
                     /host="Homo sapiens"
                     /db_xref="taxon:857135"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2006"
WGS         AHSB01000001-AHSB01000153
WGS_SCAFLD  NZ_AHSB01000001-NZ_AHSB01000153
//
LOCUS       NZ_AHRE01000000      1952324 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus mutans SA41, whole genome shotgun sequencing project.
ACCESSION   NZ_AHRE00000000
VERSION     NZ_AHRE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02429080
            Assembly: GCF_000339075.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus mutans SA41
  ORGANISM  Streptococcus mutans SA41
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1952324)
  AUTHORS   Cornejo,O.E., Lefebure,T., Bitar,P.D., Lang,P., Richards,V.P.,
            Eilertson,K., Do,T., Beighton,D., Zeng,L., Ahn,S.J., Burne,R.A.,
            Siepel,A., Bustamante,C.D. and Stanhope,M.J.
  TITLE     Evolutionary and population genomics of the cavity causing bacteria
            Streptococcus mutans
  JOURNAL   Mol Biol Evol 30 (4), 881-893 (2013)
   PUBMED   23228887
REFERENCE   2  (bases 1 to 1952324)
  AUTHORS   Lefebure,T., Suzuki,H., Pavinski Bitar,P.D., Burne,R.A. and
            Stanhope,M.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-JUL-2010) Population Medicine and Diagnostic
            Sciences, Cornell University, Ithaca, NY 14853, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AHRE00000000.1.
            The Streptococcus mutans SA41 whole genome shotgun (WGS) project
            has the project accession NZ_AHRE00000000.  This version of the
            project (01) has the accession number NZ_AHRE01000000, and consists
            of sequences AHRE01000001-AHRE01000104.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 0.7.55
            Genome Coverage       :: 50x
            Sequencing Technology :: Illumina GAII single end reads
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000339075.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:19:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,935
            CDSs (total)                      :: 1,899
            Genes (coding)                    :: 1,829
            CDSs (with protein)               :: 1,829
            Genes (RNA)                       :: 36
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 37 of 70
            Pseudo Genes (incomplete)         :: 38 of 70
            Pseudo Genes (internal stop)      :: 18 of 70
            Pseudo Genes (multiple problems)  :: 19 of 70
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1952324
                     /organism="Streptococcus mutans SA41"
                     /mol_type="genomic DNA"
                     /strain="SA41"
                     /isolation_source="oral cavity"
                     /host="Homo sapiens"
                     /db_xref="taxon:857103"
                     /geo_loc_name="South Africa"
                     /collection_date="2001"
WGS         AHRE01000001-AHRE01000104
WGS_SCAFLD  NZ_AHRE01000001-NZ_AHRE01000104
//
LOCUS       NZ_AHSV01000000      1963147 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus mutans NLML8, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AHSV00000000
VERSION     NZ_AHSV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02429068
            Assembly: GCF_000339495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus mutans NLML8
  ORGANISM  Streptococcus mutans NLML8
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1963147)
  AUTHORS   Cornejo,O.E., Lefebure,T., Bitar,P.D., Lang,P., Richards,V.P.,
            Eilertson,K., Do,T., Beighton,D., Zeng,L., Ahn,S.J., Burne,R.A.,
            Siepel,A., Bustamante,C.D. and Stanhope,M.J.
  TITLE     Evolutionary and population genomics of the cavity causing bacteria
            Streptococcus mutans
  JOURNAL   Mol Biol Evol 30 (4), 881-893 (2013)
   PUBMED   23228887
REFERENCE   2  (bases 1 to 1963147)
  AUTHORS   Lefebure,T., Suzuki,H., Pavinski Bitar,P.D., Burne,R.A. and
            Stanhope,M.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-JUL-2010) Population Medicine and Diagnostic
            Sciences, Cornell University, Ithaca, NY 14853, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AHSV00000000.1.
            The Streptococcus mutans NLML8 whole genome shotgun (WGS) project
            has the project accession NZ_AHSV00000000.  This version of the
            project (01) has the accession number NZ_AHSV01000000, and consists
            of sequences AHSV01000001-AHSV01000135.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 0.7.55
            Genome Coverage       :: 50x
            Sequencing Technology :: Illumina GAII single end reads
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000339495.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:18:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,939
            CDSs (total)                      :: 1,904
            Genes (coding)                    :: 1,818
            CDSs (with protein)               :: 1,818
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 86
            CDSs (without protein)            :: 86
            Pseudo Genes (ambiguous residues) :: 0 of 86
            Pseudo Genes (frameshifted)       :: 44 of 86
            Pseudo Genes (incomplete)         :: 47 of 86
            Pseudo Genes (internal stop)      :: 17 of 86
            Pseudo Genes (multiple problems)  :: 19 of 86
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1963147
                     /organism="Streptococcus mutans NLML8"
                     /mol_type="genomic DNA"
                     /strain="NLML8"
                     /isolation_source="oral cavity"
                     /host="Homo sapiens"
                     /db_xref="taxon:857115"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2002"
WGS         AHSV01000001-AHSV01000135
WGS_SCAFLD  NZ_AHSV01000001-NZ_AHSV01000135
//
LOCUS       NZ_AHSO01000000      1991361 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus mutans W6, whole genome shotgun sequencing project.
ACCESSION   NZ_AHSO00000000
VERSION     NZ_AHSO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02429078
            Assembly: GCF_000339995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus mutans W6
  ORGANISM  Streptococcus mutans W6
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1991361)
  AUTHORS   Cornejo,O.E., Lefebure,T., Bitar,P.D., Lang,P., Richards,V.P.,
            Eilertson,K., Do,T., Beighton,D., Zeng,L., Ahn,S.J., Burne,R.A.,
            Siepel,A., Bustamante,C.D. and Stanhope,M.J.
  TITLE     Evolutionary and population genomics of the cavity causing bacteria
            Streptococcus mutans
  JOURNAL   Mol Biol Evol 30 (4), 881-893 (2013)
   PUBMED   23228887
REFERENCE   2  (bases 1 to 1991361)
  AUTHORS   Lefebure,T., Suzuki,H., Pavinski Bitar,P.D., Burne,R.A. and
            Stanhope,M.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2010) Population Medicine and Diagnostic
            Sciences, Cornell University, Ithaca, NY 14853, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AHSO00000000.1.
            The Streptococcus mutans W6 whole genome shotgun (WGS) project has
            the project accession NZ_AHSO00000000.  This version of the project
            (01) has the accession number NZ_AHSO01000000, and consists of
            sequences AHSO01000001-AHSO01000114.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 0.7.55
            Genome Coverage       :: 50x
            Sequencing Technology :: Illumina GAII single end reads
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000339995.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:21:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,981
            CDSs (total)                      :: 1,946
            Genes (coding)                    :: 1,887
            CDSs (with protein)               :: 1,887
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 25 of 59
            Pseudo Genes (incomplete)         :: 33 of 59
            Pseudo Genes (internal stop)      :: 17 of 59
            Pseudo Genes (multiple problems)  :: 12 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1991361
                     /organism="Streptococcus mutans W6"
                     /mol_type="genomic DNA"
                     /strain="W6"
                     /isolation_source="oral cavity"
                     /host="Homo sapiens"
                     /db_xref="taxon:857122"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2006"
WGS         AHSO01000001-AHSO01000114
WGS_SCAFLD  NZ_AHSO01000001-NZ_AHSO01000114
//
LOCUS       NZ_AHRG01000000      1983724 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus mutans R221, whole genome shotgun sequencing project.
ACCESSION   NZ_AHRG00000000
VERSION     NZ_AHRG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02429034
            Assembly: GCF_000339115.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus mutans R221
  ORGANISM  Streptococcus mutans R221
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1983724)
  AUTHORS   Cornejo,O.E., Lefebure,T., Bitar,P.D., Lang,P., Richards,V.P.,
            Eilertson,K., Do,T., Beighton,D., Zeng,L., Ahn,S.J., Burne,R.A.,
            Siepel,A., Bustamante,C.D. and Stanhope,M.J.
  TITLE     Evolutionary and population genomics of the cavity causing bacteria
            Streptococcus mutans
  JOURNAL   Mol Biol Evol 30 (4), 881-893 (2013)
   PUBMED   23228887
REFERENCE   2  (bases 1 to 1983724)
  AUTHORS   Lefebure,T., Suzuki,H., Pavinski Bitar,P.D., Burne,R.A. and
            Stanhope,M.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2010) Population Medicine and Diagnostic
            Sciences, Cornell University, Ithaca, NY 14853, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AHRG00000000.1.
            The Streptococcus mutans R221 whole genome shotgun (WGS) project
            has the project accession NZ_AHRG00000000.  This version of the
            project (01) has the accession number NZ_AHRG01000000, and consists
            of sequences AHRG01000001-AHRG01000109.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 0.7.55
            Genome Coverage       :: 50x
            Sequencing Technology :: Illumina GAII single end reads
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000339115.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:17:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,977
            CDSs (total)                      :: 1,942
            Genes (coding)                    :: 1,873
            CDSs (with protein)               :: 1,873
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 36 of 69
            Pseudo Genes (incomplete)         :: 39 of 69
            Pseudo Genes (internal stop)      :: 18 of 69
            Pseudo Genes (multiple problems)  :: 19 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1983724
                     /organism="Streptococcus mutans R221"
                     /mol_type="genomic DNA"
                     /strain="R221"
                     /isolation_source="oral cavity"
                     /host="Homo sapiens"
                     /db_xref="taxon:857101"
                     /geo_loc_name="Brazil"
WGS         AHRG01000001-AHRG01000109
WGS_SCAFLD  NZ_AHRG01000001-NZ_AHRG01000109
//
LOCUS       NZ_AHSP01000000      2081419 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus mutans SF1, whole genome shotgun sequencing project.
ACCESSION   NZ_AHSP00000000
VERSION     NZ_AHSP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02429030
            Assembly: GCF_000340015.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus mutans SF1
  ORGANISM  Streptococcus mutans SF1
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2081419)
  AUTHORS   Cornejo,O.E., Lefebure,T., Bitar,P.D., Lang,P., Richards,V.P.,
            Eilertson,K., Do,T., Beighton,D., Zeng,L., Ahn,S.J., Burne,R.A.,
            Siepel,A., Bustamante,C.D. and Stanhope,M.J.
  TITLE     Evolutionary and population genomics of the cavity causing bacteria
            Streptococcus mutans
  JOURNAL   Mol Biol Evol 30 (4), 881-893 (2013)
   PUBMED   23228887
REFERENCE   2  (bases 1 to 2081419)
  AUTHORS   Lefebure,T., Suzuki,H., Pavinski Bitar,P.D., Burne,R.A. and
            Stanhope,M.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JUN-2010) Population Medicine and Diagnostic
            Sciences, Cornell University, Ithaca, NY 14853, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AHSP00000000.1.
            The Streptococcus mutans SF1 whole genome shotgun (WGS) project has
            the project accession NZ_AHSP00000000.  This version of the project
            (01) has the accession number NZ_AHSP01000000, and consists of
            sequences AHSP01000001-AHSP01000185.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 0.7.55
            Genome Coverage       :: 50x
            Sequencing Technology :: Illumina GAII single end reads
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000340015.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:25:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,087
            CDSs (total)                      :: 2,052
            Genes (coding)                    :: 1,957
            CDSs (with protein)               :: 1,957
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 95
            CDSs (without protein)            :: 95
            Pseudo Genes (ambiguous residues) :: 0 of 95
            Pseudo Genes (frameshifted)       :: 36 of 95
            Pseudo Genes (incomplete)         :: 59 of 95
            Pseudo Genes (internal stop)      :: 23 of 95
            Pseudo Genes (multiple problems)  :: 18 of 95
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2081419
                     /organism="Streptococcus mutans SF1"
                     /mol_type="genomic DNA"
                     /strain="SF1"
                     /isolation_source="oral cavity"
                     /host="Homo sapiens"
                     /db_xref="taxon:857121"
                     /geo_loc_name="USA"
                     /collection_date="2001"
WGS         AHSP01000001-AHSP01000185
WGS_SCAFLD  NZ_AHSP01000001-NZ_AHSP01000185
//
LOCUS       NZ_AHRD01000000      1992890 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus mutans SA38, whole genome shotgun sequencing project.
ACCESSION   NZ_AHRD00000000
VERSION     NZ_AHRD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02428983
            Assembly: GCF_000339615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus mutans SA38
  ORGANISM  Streptococcus mutans SA38
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1992890)
  AUTHORS   Cornejo,O.E., Lefebure,T., Bitar,P.D., Lang,P., Richards,V.P.,
            Eilertson,K., Do,T., Beighton,D., Zeng,L., Ahn,S.J., Burne,R.A.,
            Siepel,A., Bustamante,C.D. and Stanhope,M.J.
  TITLE     Evolutionary and population genomics of the cavity causing bacteria
            Streptococcus mutans
  JOURNAL   Mol Biol Evol 30 (4), 881-893 (2013)
   PUBMED   23228887
REFERENCE   2  (bases 1 to 1992890)
  AUTHORS   Lefebure,T., Suzuki,H., Pavinski Bitar,P.D., Burne,R.A. and
            Stanhope,M.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2010) Population Medicine and Diagnostic
            Sciences, Cornell University, Ithaca, NY 14853, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AHRD00000000.1.
            The Streptococcus mutans SA38 whole genome shotgun (WGS) project
            has the project accession NZ_AHRD00000000.  This version of the
            project (01) has the accession number NZ_AHRD01000000, and consists
            of sequences AHRD01000001-AHRD01000091.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Velvet v. 0.7.55
            Genome Coverage       :: 50x
            Sequencing Technology :: Illumina GAII single end reads
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000339615.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:24:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,904
            CDSs (total)                      :: 1,869
            Genes (coding)                    :: 1,810
            CDSs (with protein)               :: 1,810
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 28
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 24 of 59
            Pseudo Genes (incomplete)         :: 34 of 59
            Pseudo Genes (internal stop)      :: 16 of 59
            Pseudo Genes (multiple problems)  :: 12 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1992890
                     /organism="Streptococcus mutans SA38"
                     /mol_type="genomic DNA"
                     /strain="SA38"
                     /isolation_source="oral cavity"
                     /host="Homo sapiens"
                     /db_xref="taxon:857104"
                     /geo_loc_name="South Africa"
                     /collection_date="2001"
WGS         AHRD01000001-AHRD01000091
WGS_SCAFLD  NZ_AHRD01000001-NZ_AHRD01000091
//
LOCUS       NZ_ASHP01000000      2063372 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pneumoniae BHN418, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ASHP00000000
VERSION     NZ_ASHP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02471310
            Assembly: GCF_000495375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pneumoniae BHN418
  ORGANISM  Streptococcus pneumoniae BHN418
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2063372)
  AUTHORS   Browall,S., Norman,M., Tangrot,J., Galanis,I., Sjostrom,K.,
            Dagerhamn,J., Hellberg,C., Pathak,A., Spadafina,T., Sandgren,A.,
            Battig,P., Franzen,O., Andersson,B., Ortqvist,A., Normark,S. and
            Henriques-Normark,B.
  TITLE     Intraclonal variations among Streptococcus pneumoniae isolates
            influence the likelihood of invasive disease in children
  JOURNAL   J Infect Dis 209 (3), 377-388 (2014)
   PUBMED   24009156
REFERENCE   2  (bases 1 to 2063372)
  AUTHORS   Tangrot,J. and Henriques-Normark,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-MAY-2013) Department of Molecular Biology, Umea
            University, Umea University, Umea 901 87, Sweden
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ASHP00000000.1.
            The Streptococcus pneumoniae BHN418 whole genome shotgun (WGS)
            project has the project accession NZ_ASHP00000000.  This version of
            the project (01) has the accession number NZ_ASHP01000000, and
            consists of sequences ASHP01000001-ASHP01000068.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            Bacteria available from Birgitta Henriques-Normark, MTC, Karolinska
            Institute, Nobelv#g 16, 171 77 Stockholm, Sweden.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Newbler v. 2.5
            Assembly Name         :: BHN418_1.0
            Genome Coverage       :: 27.0x
            Sequencing Technology :: 454; Sanger
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000495375.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:59:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,147
            CDSs (total)                      :: 2,105
            Genes (coding)                    :: 1,932
            CDSs (with protein)               :: 1,932
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 36
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 173
            CDSs (without protein)            :: 173
            Pseudo Genes (ambiguous residues) :: 0 of 173
            Pseudo Genes (frameshifted)       :: 79 of 173
            Pseudo Genes (incomplete)         :: 98 of 173
            Pseudo Genes (internal stop)      :: 47 of 173
            Pseudo Genes (multiple problems)  :: 43 of 173
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2063372
                     /organism="Streptococcus pneumoniae BHN418"
                     /mol_type="genomic DNA"
                     /strain="BHN418"
                     /serotype="6B"
                     /isolation_source="nasopharynx"
                     /host="Homo sapiens"
                     /db_xref="taxon:1330041"
                     /geo_loc_name="Sweden: Stockholm"
                     /collection_date="1998"
WGS         ASHP01000001-ASHP01000068
WGS_SCAFLD  NZ_ASHP01000001-NZ_ASHP01000068
//
LOCUS       NZ_ASHO01000000      2142623 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pneumoniae BHN237, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ASHO00000000
VERSION     NZ_ASHO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02471308
            Assembly: GCF_000495395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pneumoniae BHN237
  ORGANISM  Streptococcus pneumoniae BHN237
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2142623)
  AUTHORS   Browall,S., Norman,M., Tangrot,J., Galanis,I., Sjostrom,K.,
            Dagerhamn,J., Hellberg,C., Pathak,A., Spadafina,T., Sandgren,A.,
            Battig,P., Franzen,O., Andersson,B., Ortqvist,A., Normark,S. and
            Henriques-Normark,B.
  TITLE     Intraclonal variations among Streptococcus pneumoniae isolates
            influence the likelihood of invasive disease in children
  JOURNAL   J Infect Dis 209 (3), 377-388 (2014)
   PUBMED   24009156
REFERENCE   2  (bases 1 to 2142623)
  AUTHORS   Tangrot,J. and Henriques-Normark,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-MAY-2013) Department of Molecular Biology, Umea
            University, Umea 901 87, Sweden
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ASHO00000000.1.
            The Streptococcus pneumoniae BHN237 whole genome shotgun (WGS)
            project has the project accession NZ_ASHO00000000.  This version of
            the project (01) has the accession number NZ_ASHO01000000, and
            consists of sequences ASHO01000001-ASHO01000092.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            Bacteria available from Birgitta Henriques-Normark, MTC, Karolinska
            Institute, Nobelv#g 16, 171 77 Stockholm, Sweden.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Newbler v. 2.5
            Assembly Name         :: BHN237_1.0
            Genome Coverage       :: 29.0x
            Sequencing Technology :: 454; Sanger
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000495395.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:59:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,282
            CDSs (total)                      :: 2,237
            Genes (coding)                    :: 2,058
            CDSs (with protein)               :: 2,058
            Genes (RNA)                       :: 45
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 179
            CDSs (without protein)            :: 179
            Pseudo Genes (ambiguous residues) :: 0 of 179
            Pseudo Genes (frameshifted)       :: 76 of 179
            Pseudo Genes (incomplete)         :: 103 of 179
            Pseudo Genes (internal stop)      :: 46 of 179
            Pseudo Genes (multiple problems)  :: 40 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2142623
                     /organism="Streptococcus pneumoniae BHN237"
                     /mol_type="genomic DNA"
                     /strain="BHN237"
                     /serotype="6B"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:1330042"
                     /geo_loc_name="Sweden: Stockholm"
                     /collection_date="2001"
WGS         ASHO01000001-ASHO01000092
WGS_SCAFLD  NZ_ASHO01000001-NZ_ASHO01000092
//
LOCUS       NZ_ASHQ01000000      2108487 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pneumoniae BHN427, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ASHQ00000000
VERSION     NZ_ASHQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02471305
            Assembly: GCF_000495355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pneumoniae BHN427
  ORGANISM  Streptococcus pneumoniae BHN427
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2108487)
  AUTHORS   Browall,S., Norman,M., Tangrot,J., Galanis,I., Sjostrom,K.,
            Dagerhamn,J., Hellberg,C., Pathak,A., Spadafina,T., Sandgren,A.,
            Battig,P., Franzen,O., Andersson,B., Ortqvist,A., Normark,S. and
            Henriques-Normark,B.
  TITLE     Intraclonal variations among Streptococcus pneumoniae isolates
            influence the likelihood of invasive disease in children
  JOURNAL   J Infect Dis 209 (3), 377-388 (2014)
   PUBMED   24009156
REFERENCE   2  (bases 1 to 2108487)
  AUTHORS   Tangrot,J. and Henriques-Normark,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-MAY-2013) Department of Molecular Biology, Umea
            University, Umea University, Umea 901 87, Sweden
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ASHQ00000000.1.
            The Streptococcus pneumoniae BHN427 whole genome shotgun (WGS)
            project has the project accession NZ_ASHQ00000000.  This version of
            the project (01) has the accession number NZ_ASHQ01000000, and
            consists of sequences ASHQ01000001-ASHQ01000076.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            Bacteria available from Birgitta Henriques-Normark, MTC, Karolinska
            Institute, Nobelv#g 16, 171 77 Stockholm, Sweden.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Newbler v. 2.5
            Assembly Name         :: BH427_1.0
            Genome Coverage       :: 25.0x
            Sequencing Technology :: 454; Sanger
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000495355.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:57:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,237
            CDSs (total)                      :: 2,194
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 196
            CDSs (without protein)            :: 196
            Pseudo Genes (ambiguous residues) :: 0 of 196
            Pseudo Genes (frameshifted)       :: 79 of 196
            Pseudo Genes (incomplete)         :: 121 of 196
            Pseudo Genes (internal stop)      :: 49 of 196
            Pseudo Genes (multiple problems)  :: 45 of 196
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2108487
                     /organism="Streptococcus pneumoniae BHN427"
                     /mol_type="genomic DNA"
                     /strain="BHN427"
                     /serotype="6B"
                     /isolation_source="nasopharynx"
                     /host="Homo sapiens"
                     /db_xref="taxon:1330044"
                     /geo_loc_name="Sweden: Stockholm"
                     /collection_date="1998"
WGS         ASHQ01000001-ASHQ01000076
WGS_SCAFLD  NZ_ASHQ01000001-NZ_ASHQ01000076
//
LOCUS       NZ_JBBEFT010000000   2085587 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pneumoniae strain NNSp 2751, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBBEFT000000000
VERSION     NZ_JBBEFT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39482868
            Assembly: GCF_037402675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pneumoniae
  ORGANISM  Streptococcus pneumoniae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2085587)
  AUTHORS   Boriskina,E.V., Gordinskaya,N.A., Kropotov,V.S., Alekseeva,A.E.,
            Makhova,M.A., Kryazhev,D.V. and Shkurkina,I.S.
  TITLE     Whole genome of Streptococcus pneumoniae NNSp 2751
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2085587)
  AUTHORS   Boriskina,E.V., Gordinskaya,N.A., Kropotov,V.S., Alekseeva,A.E.,
            Makhova,M.A., Kryazhev,D.V. and Shkurkina,I.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-JAN-2024) Microbiology Laboratory, Blokhina
            Scientific Research Institute of Epidemiology and Microbiology of
            Nizhny Novgorod, Malaya Yamskaya, 71, Nizhny Novgorod 603950,
            Russia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBEFT000000000.1.
            The Streptococcus pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBBEFT000000000.  This version of the
            project (01) has the accession number NZ_JBBEFT010000000, and
            consists of sequences JBBEFT010000001-JBBEFT010000496.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 20.0x
            Sequencing Technology  :: Illumina iSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037402675.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:36:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,299
            CDSs (total)                      :: 2,258
            Genes (coding)                    :: 2,026
            CDSs (with protein)               :: 2,026
            Genes (RNA)                       :: 41
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 2, 1 (16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 232
            CDSs (without protein)            :: 232
            Pseudo Genes (ambiguous residues) :: 0 of 232
            Pseudo Genes (frameshifted)       :: 63 of 232
            Pseudo Genes (incomplete)         :: 160 of 232
            Pseudo Genes (internal stop)      :: 45 of 232
            Pseudo Genes (multiple problems)  :: 32 of 232
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2085587
                     /organism="Streptococcus pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="NNSp 2751"
                     /host="Homo sapiens"
                     /db_xref="taxon:1313"
                     /geo_loc_name="Russia"
                     /collection_date="2022-12-26"
WGS         JBBEFT010000001-JBBEFT010000496
WGS_SCAFLD  NZ_JBBEFT010000001-NZ_JBBEFT010000496
//
LOCUS       NZ_JAQMFP010000000   1896311 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus oralis strain DP3_neg1_1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAQMFP000000000
VERSION     NZ_JAQMFP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN30875304
            Assembly: GCF_028307925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus oralis
  ORGANISM  Streptococcus oralis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1896311)
  AUTHORS   Ghosh,S.
  TITLE     Dental plaque isolates bound by oral lectin ZG16B
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1896311)
  AUTHORS   Ghosh,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2022) Biology, Massachusetts Institute of
            Technology, 31 Ames St, Building 68-389, Cambridge, MA 02142, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAQMFP000000000.1.
            The Streptococcus oralis whole genome shotgun (WGS) project has the
            project accession NZ_JAQMFP000000000.  This version of the project
            (01) has the accession number NZ_JAQMFP010000000, and consists of
            sequences JAQMFP010000001-JAQMFP010000021.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 10-JUN-2021
            Assembly Method        :: ABySS v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_028307925.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:29:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,871
            CDSs (total)                      :: 1,812
            Genes (coding)                    :: 1,768
            CDSs (with protein)               :: 1,768
            Genes (RNA)                       :: 59
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 2, 2 (5S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 44
            CDSs (without protein)            :: 44
            Pseudo Genes (ambiguous residues) :: 0 of 44
            Pseudo Genes (frameshifted)       :: 22 of 44
            Pseudo Genes (incomplete)         :: 18 of 44
            Pseudo Genes (internal stop)      :: 14 of 44
            Pseudo Genes (multiple problems)  :: 9 of 44
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1896311
                     /organism="Streptococcus oralis"
                     /mol_type="genomic DNA"
                     /strain="DP3_neg1_1"
                     /isolation_source="Supragingival and interproximal dental
                     plaque"
                     /host="Homo sapiens"
                     /db_xref="taxon:1303"
                     /geo_loc_name="USA: Buffalo, NY"
                     /collection_date="2021-02-13"
WGS         JAQMFP010000001-JAQMFP010000021
WGS_SCAFLD  NZ_JAQMFP010000001-NZ_JAQMFP010000021
//
LOCUS       NZ_ADSR01000000      4383307 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis K11973002, whole genome shotgun sequencing project.
ACCESSION   NZ_ADSR00000000
VERSION     NZ_ADSR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403091
            Assembly: GCF_000325145.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis K11973002
  ORGANISM  Yersinia pestis K11973002
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4383307)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Genome dynamics and evolutionary history of the plague pathogen,
            Yersinia pestis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4383307)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADSR00000000.1.
            The Yersinia pestis K11973002 whole genome shotgun (WGS) project
            has the project accession NZ_ADSR00000000.  This version of the
            project (01) has the accession number NZ_ADSR01000000, and consists
            of sequences ADSR01000001-ADSR01000910.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 74X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000325145.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:30:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,209
            CDSs (total)                      :: 4,178
            Genes (coding)                    :: 3,882
            CDSs (with protein)               :: 3,882
            Genes (RNA)                       :: 31
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 20
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 296
            CDSs (without protein)            :: 296
            Pseudo Genes (ambiguous residues) :: 0 of 296
            Pseudo Genes (frameshifted)       :: 87 of 296
            Pseudo Genes (incomplete)         :: 221 of 296
            Pseudo Genes (internal stop)      :: 18 of 296
            Pseudo Genes (multiple problems)  :: 28 of 296
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4383307
                     /organism="Yersinia pestis K11973002"
                     /mol_type="genomic DNA"
                     /strain="K11973002"
                     /db_xref="taxon:755928"
WGS         ADSR01000001-ADSR01000910
WGS_SCAFLD  NZ_ADSR01000001-NZ_ADSR01000910
//
LOCUS       NZ_AMQL01000000      4651700 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis INS, whole genome shotgun sequencing project.
ACCESSION   NZ_AMQL00000000
VERSION     NZ_AMQL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403946
            Assembly: GCF_000311885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis INS
  ORGANISM  Yersinia pestis INS
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4651700)
  AUTHORS   Caceres,O., Montenegro,J., Padilla,C., Tarazona,D., Bailon,H.,
            Garcia,P., Cespedes,M., Valencia,P. and Guio,H.
  TITLE     Whole-Genome Sequencing and Comparative Analysis of Yersinia
            pestis, the Causative Agent of a Plague Outbreak in Northern Peru
  JOURNAL   Genome Announc 1 (1) (2013)
   PUBMED   23469360
REFERENCE   2  (bases 1 to 4651700)
  AUTHORS   Montenegro,J., Caceres,O., Tarazona,D., Padilla,C., Cespedes,M.,
            Bailon,H., Garcia,P., Valencia,P. and Guio,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-SEP-2012) Laboratorio de Biotecnologia y Biologia
            Molecular, Instituto Nacional de Salud, Av. Defensores del Morro
            2268, Lima, Chorrillos 09, Peru
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AMQL00000000.1.
            The Yersinia pestis INS whole genome shotgun (WGS) project has the
            project accession NZ_AMQL00000000.  This version of the project
            (01) has the accession number NZ_AMQL01000000, and consists of
            sequences AMQL01000001-AMQL01000018.
            Reference-guided assembly based on Yersinia pestis CO92 deposited
            in NC_003143.1.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            Source bacteria available from Area Bartonelosis, Laboratorio de
            Metaxenicas  Bacterianas, Instituto Nacional de Salud, Capac
            Yupanqui 1400, Jesus Maria, Lima 11, Peru.
            Source DNA available from Laboratorio de Biotecnologia y Biologia
            Molecular, Instituto Nacional de Salud, Av. Defensores del Morro
            2268, Chorrillos, Lima 9, Peru.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Bowtie v. 2.0
            Genome Coverage       :: 250x
            Sequencing Technology :: SOLiD 3 plus
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000311885.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:32:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,210
            CDSs (total)                      :: 4,110
            Genes (coding)                    :: 3,917
            CDSs (with protein)               :: 3,917
            Genes (RNA)                       :: 100
            rRNAs                             :: 7, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 5, 6 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 69
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 193
            CDSs (without protein)            :: 193
            Pseudo Genes (ambiguous residues) :: 0 of 193
            Pseudo Genes (frameshifted)       :: 78 of 193
            Pseudo Genes (incomplete)         :: 120 of 193
            Pseudo Genes (internal stop)      :: 19 of 193
            Pseudo Genes (multiple problems)  :: 20 of 193
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4651700
                     /organism="Yersinia pestis INS"
                     /mol_type="genomic DNA"
                     /strain="INS"
                     /isolation_source="blood sample taken during an outbreak
                     of pneumonic plague in Trujillo"
                     /host="Homo sapiens"
                     /db_xref="taxon:1159617"
                     /geo_loc_name="Peru"
                     /collection_date="2010-07"
WGS         AMQL01000001-AMQL01000018
WGS_SCAFLD  NZ_AMQL01000001-NZ_AMQL01000018
//
LOCUS       NZ_ADSS01000000      4399142 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis K21985002, whole genome shotgun sequencing project.
ACCESSION   NZ_ADSS00000000
VERSION     NZ_ADSS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403092
            Assembly: GCF_000325165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis K21985002
  ORGANISM  Yersinia pestis K21985002
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4399142)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4399142)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADSS00000000.1.
            The Yersinia pestis K21985002 whole genome shotgun (WGS) project
            has the project accession NZ_ADSS00000000.  This version of the
            project (01) has the accession number NZ_ADSS01000000, and consists
            of sequences ADSS01000001-ADSS01001264.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 67X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000325165.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:32:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,459
            CDSs (total)                      :: 4,427
            Genes (coding)                    :: 4,062
            CDSs (with protein)               :: 4,062
            Genes (RNA)                       :: 32
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1, 3 (5S, 23S)
            tRNAs                             :: 20
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 365
            CDSs (without protein)            :: 365
            Pseudo Genes (ambiguous residues) :: 0 of 365
            Pseudo Genes (frameshifted)       :: 81 of 365
            Pseudo Genes (incomplete)         :: 298 of 365
            Pseudo Genes (internal stop)      :: 18 of 365
            Pseudo Genes (multiple problems)  :: 30 of 365
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4399142
                     /organism="Yersinia pestis K21985002"
                     /mol_type="genomic DNA"
                     /strain="K21985002"
                     /db_xref="taxon:755927"
WGS         ADSS01000001-ADSS01001264
WGS_SCAFLD  NZ_ADSS01000001-NZ_ADSS01001264
//
LOCUS       NZ_ADSM01000000      4335804 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis I1991001, whole genome shotgun sequencing project.
ACCESSION   NZ_ADSM00000000
VERSION     NZ_ADSM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403086
            Assembly: GCF_000325045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis I1991001
  ORGANISM  Yersinia pestis I1991001
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4335804)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4335804)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADSM00000000.1.
            The Yersinia pestis I1991001 whole genome shotgun (WGS) project has
            the project accession NZ_ADSM00000000.  This version of the project
            (01) has the accession number NZ_ADSM01000000, and consists of
            sequences ADSM01000001-ADSM01001191.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 54X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000325045.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:35:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,284
            CDSs (total)                      :: 4,251
            Genes (coding)                    :: 3,851
            CDSs (with protein)               :: 3,851
            Genes (RNA)                       :: 33
            rRNAs                             :: 1, 2, 2 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 20
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 400
            CDSs (without protein)            :: 400
            Pseudo Genes (ambiguous residues) :: 0 of 400
            Pseudo Genes (frameshifted)       :: 81 of 400
            Pseudo Genes (incomplete)         :: 329 of 400
            Pseudo Genes (internal stop)      :: 20 of 400
            Pseudo Genes (multiple problems)  :: 28 of 400
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4335804
                     /organism="Yersinia pestis I1991001"
                     /mol_type="genomic DNA"
                     /strain="I1991001"
                     /db_xref="taxon:755858"
WGS         ADSM01000001-ADSM01001191
WGS_SCAFLD  NZ_ADSM01000001-NZ_ADSM01001191
//
LOCUS       NZ_JBSWUT010000000   5028824 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Tritonibacter mobilis strain AWH4_248, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSWUT000000000
VERSION     NZ_JBSWUT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861999
            Assembly: GCF_056159185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Tritonibacter mobilis
  ORGANISM  Tritonibacter mobilis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Tritonibacter.
REFERENCE   1  (bases 1 to 5028824)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWUT000000000.1.
            The Tritonibacter mobilis whole genome shotgun (WGS) project has
            the project accession NZ_JBSWUT000000000.  This version of the
            project (01) has the accession number NZ_JBSWUT010000000, and
            consists of sequences JBSWUT010000001-JBSWUT010000016.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 633x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056159185.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:11:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,783
            CDSs (total)                      :: 4,710
            Genes (coding)                    :: 4,639
            CDSs (with protein)               :: 4,639
            Genes (RNA)                       :: 73
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 25 of 71
            Pseudo Genes (incomplete)         :: 59 of 71
            Pseudo Genes (internal stop)      :: 10 of 71
            Pseudo Genes (multiple problems)  :: 20 of 71
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5028824
                     /organism="Tritonibacter mobilis"
                     /mol_type="genomic DNA"
                     /strain="AWH4_248"
                     /isolation_source="Marine"
                     /db_xref="taxon:379347"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-10-31"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWUT010000001-JBSWUT010000016
WGS_SCAFLD  NZ_JBSWUT010000001-NZ_JBSWUT010000016
//
LOCUS       NZ_ADSN01000000      4498336 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis I1994006, whole genome shotgun sequencing project.
ACCESSION   NZ_ADSN00000000
VERSION     NZ_ADSN00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403087
            Assembly: GCF_000325065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis I1994006
  ORGANISM  Yersinia pestis I1994006
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4498336)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4498336)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADSN00000000.1.
            The Yersinia pestis I1994006 whole genome shotgun (WGS) project has
            the project accession NZ_ADSN00000000.  This version of the project
            (01) has the accession number NZ_ADSN01000000, and consists of
            sequences ADSN01000001-ADSN01001247.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 69X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000325065.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:44:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,547
            CDSs (total)                      :: 4,512
            Genes (coding)                    :: 4,112
            CDSs (with protein)               :: 4,112
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 3, 4 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 3, 4 (5S, 16S, 23S)
            tRNAs                             :: 20
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 400
            CDSs (without protein)            :: 400
            Pseudo Genes (ambiguous residues) :: 0 of 400
            Pseudo Genes (frameshifted)       :: 85 of 400
            Pseudo Genes (incomplete)         :: 326 of 400
            Pseudo Genes (internal stop)      :: 20 of 400
            Pseudo Genes (multiple problems)  :: 29 of 400
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4498336
                     /organism="Yersinia pestis I1994006"
                     /mol_type="genomic DNA"
                     /strain="I1994006"
                     /db_xref="taxon:755910"
WGS         ADSN01000001-ADSN01001247
WGS_SCAFLD  NZ_ADSN01000001-NZ_ADSN01001247
//
LOCUS       NZ_ADSQ01000000      4532297 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis J1978002, whole genome shotgun sequencing project.
ACCESSION   NZ_ADSQ00000000
VERSION     NZ_ADSQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403090
            Assembly: GCF_000325125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis J1978002
  ORGANISM  Yersinia pestis J1978002
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4532297)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4532297)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADSQ00000000.1.
            The Yersinia pestis J1978002 whole genome shotgun (WGS) project has
            the project accession NZ_ADSQ00000000.  This version of the project
            (01) has the accession number NZ_ADSQ01000000, and consists of
            sequences ADSQ01000001-ADSQ01001098.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 68X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000325125.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:41:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,486
            CDSs (total)                      :: 4,463
            Genes (coding)                    :: 4,137
            CDSs (with protein)               :: 4,137
            Genes (RNA)                       :: 23
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 17
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 326
            CDSs (without protein)            :: 326
            Pseudo Genes (ambiguous residues) :: 0 of 326
            Pseudo Genes (frameshifted)       :: 85 of 326
            Pseudo Genes (incomplete)         :: 253 of 326
            Pseudo Genes (internal stop)      :: 20 of 326
            Pseudo Genes (multiple problems)  :: 29 of 326
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4532297
                     /organism="Yersinia pestis J1978002"
                     /mol_type="genomic DNA"
                     /strain="J1978002"
                     /db_xref="taxon:755912"
WGS         ADSQ01000001-ADSQ01001098
WGS_SCAFLD  NZ_ADSQ01000001-NZ_ADSQ01001098
//
LOCUS       NZ_ADSL01000000      4429836 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis I1970005, whole genome shotgun sequencing project.
ACCESSION   NZ_ADSL00000000
VERSION     NZ_ADSL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403085
            Assembly: GCF_000325025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis I1970005
  ORGANISM  Yersinia pestis I1970005
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4429836)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4429836)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADSL00000000.1.
            The Yersinia pestis I1970005 whole genome shotgun (WGS) project has
            the project accession NZ_ADSL00000000.  This version of the project
            (01) has the accession number NZ_ADSL01000000, and consists of
            sequences ADSL01000001-ADSL01001199.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 49X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000325025.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:45:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,349
            CDSs (total)                      :: 4,317
            Genes (coding)                    :: 3,966
            CDSs (with protein)               :: 3,966
            Genes (RNA)                       :: 32
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 20
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 351
            CDSs (without protein)            :: 351
            Pseudo Genes (ambiguous residues) :: 0 of 351
            Pseudo Genes (frameshifted)       :: 88 of 351
            Pseudo Genes (incomplete)         :: 277 of 351
            Pseudo Genes (internal stop)      :: 19 of 351
            Pseudo Genes (multiple problems)  :: 31 of 351
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4429836
                     /organism="Yersinia pestis I1970005"
                     /mol_type="genomic DNA"
                     /strain="I1970005"
                     /db_xref="taxon:755952"
WGS         ADSL01000001-ADSL01001199
WGS_SCAFLD  NZ_ADSL01000001-NZ_ADSL01001199
//
LOCUS       NZ_JBSWVP010000000   4607153 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Virgibacillus chiguensis strain ABR3_040, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSWVP000000000
VERSION     NZ_JBSWVP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861973
            Assembly: GCF_056159625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Virgibacillus chiguensis
  ORGANISM  Virgibacillus chiguensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Virgibacillus.
REFERENCE   1  (bases 1 to 4607153)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWVP000000000.1.
            The Virgibacillus chiguensis whole genome shotgun (WGS) project has
            the project accession NZ_JBSWVP000000000.  This version of the
            project (01) has the accession number NZ_JBSWVP010000000, and
            consists of sequences JBSWVP010000001-JBSWVP010000019.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1171x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056159625.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:19:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,299
            CDSs (total)                      :: 4,214
            Genes (coding)                    :: 4,108
            CDSs (with protein)               :: 4,108
            Genes (RNA)                       :: 85
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 106
            CDSs (without protein)            :: 106
            Pseudo Genes (ambiguous residues) :: 0 of 106
            Pseudo Genes (frameshifted)       :: 44 of 106
            Pseudo Genes (incomplete)         :: 76 of 106
            Pseudo Genes (internal stop)      :: 21 of 106
            Pseudo Genes (multiple problems)  :: 28 of 106
            CRISPR Arrays                     :: 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4607153
                     /organism="Virgibacillus chiguensis"
                     /mol_type="genomic DNA"
                     /strain="ABR3_040"
                     /isolation_source="Marine"
                     /db_xref="taxon:411959"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-11-21"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWVP010000001-JBSWVP010000019
WGS_SCAFLD  NZ_JBSWVP010000001-NZ_JBSWVP010000019
//
LOCUS       NZ_JBVTUC010000000   3099620 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Trichococcus sp. TS_SC_9, whole genome shotgun sequencing project.
ACCESSION   NZ_JBVTUC000000000
VERSION     NZ_JBVTUC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52392040
            Assembly: GCF_056156325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Trichococcus sp. TS_SC_9
  ORGANISM  Trichococcus sp. TS_SC_9
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Trichococcus.
REFERENCE   1  (bases 1 to 3099620)
  AUTHORS   Chatterjee,S., Dutta,S. and Ghosh,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-JAN-2026) Department of Biological Sciences, Bose
            Institute, Salt Lake, EN Block, Sector V, Kolkata 700091, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBVTUC000000000.1.
            The Trichococcus sp. TS_SC_9 whole genome shotgun (WGS) project has
            the project accession NZ_JBVTUC000000000.  This version of the
            project (01) has the accession number NZ_JBVTUC010000000, and
            consists of sequence JBVTUC010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.5.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 1800.22x
            Sequencing Technology  :: Illumina; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056156325.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:21:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,000
            CDSs (total)                      :: 2,826
            Genes (coding)                    :: 2,799
            CDSs (with protein)               :: 2,799
            Genes (RNA)                       :: 174
            rRNAs                             :: 10, 9, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 10, 9, 9 (5S, 16S, 23S)
            tRNAs                             :: 142
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 27
            CDSs (without protein)            :: 27
            Pseudo Genes (ambiguous residues) :: 0 of 27
            Pseudo Genes (frameshifted)       :: 2 of 27
            Pseudo Genes (incomplete)         :: 18 of 27
            Pseudo Genes (internal stop)      :: 9 of 27
            Pseudo Genes (multiple problems)  :: 2 of 27
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3099620
                     /organism="Trichococcus sp. TS_SC_9"
                     /mol_type="genomic DNA"
                     /strain="TS_SC_9"
                     /isolation_source="TsoMoriri Lake Sediment"
                     /db_xref="taxon:3469948"
                     /geo_loc_name="India: TsoMoriri Lake, Ladakh"
                     /collection_date="2021-10-28"
WGS         JBVTUC010000001
WGS_SCAFLD  NZ_CM149591
//
LOCUS       NZ_JBSWXE010000000   3397487 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Winogradskyella sp. ABM4_392, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWXE000000000
VERSION     NZ_JBSWXE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861928
            Assembly: GCF_056160445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Winogradskyella sp. ABM4_392
  ORGANISM  Winogradskyella sp. ABM4_392
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Winogradskyella.
REFERENCE   1  (bases 1 to 3397487)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWXE000000000.1.
            The Winogradskyella sp. ABM4_392 whole genome shotgun (WGS) project
            has the project accession NZ_JBSWXE000000000.  This version of the
            project (01) has the accession number NZ_JBSWXE010000000, and
            consists of sequences JBSWXE010000001-JBSWXE010000039.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 747x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056160445.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:29:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,077
            CDSs (total)                      :: 3,028
            Genes (coding)                    :: 3,022
            CDSs (with protein)               :: 3,022
            Genes (RNA)                       :: 49
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 6
            CDSs (without protein)            :: 6
            Pseudo Genes (ambiguous residues) :: 0 of 6
            Pseudo Genes (frameshifted)       :: 0 of 6
            Pseudo Genes (incomplete)         :: 4 of 6
            Pseudo Genes (internal stop)      :: 2 of 6
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3397487
                     /organism="Winogradskyella sp. ABM4_392"
                     /mol_type="genomic DNA"
                     /strain="ABM4_392"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477753"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-11-21"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWXE010000001-JBSWXE010000039
WGS_SCAFLD  NZ_JBSWXE010000001-NZ_JBSWXE010000039
//
LOCUS       NZ_JWHV01000000      2357128 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Weissella cibaria strain ff3PR, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JWHV00000000
VERSION     NZ_JWHV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03223849
            Assembly: GCF_000878215.1
KEYWORDS    WGS; RefSeq.
SOURCE      Weissella cibaria
  ORGANISM  Weissella cibaria
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
REFERENCE   1  (bases 1 to 2357128)
  AUTHORS   Lynch,K.M., Lucid,A., Arendt,E.K., Sleator,R.D., Lucey,B. and
            Coffey,A.
  TITLE     Genomics of Weissella cibaria with an examination of its metabolic
            traits
  JOURNAL   Microbiology (Reading) 161 (Pt 4), 914-930 (2015)
   PUBMED   25678547
REFERENCE   2  (bases 1 to 2357128)
  AUTHORS   Lynch,K.M. and Coffey,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-NOV-2014) Biological Sciences, Cork Institute Of
            Technology, Rossa Avenue, Bishopstown, Cork, Ireland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JWHV00000000.1.
            The Weissella cibaria whole genome shotgun (WGS) project has the
            project accession NZ_JWHV00000000.  This version of the project
            (01) has the accession number NZ_JWHV01000000, and consists of
            sequences JWHV01000001-JWHV01000060.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Newbler v. April-2014
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 27.0x
            Sequencing Technology  :: 454
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000878215.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:32:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,303
            CDSs (total)                      :: 2,223
            Genes (coding)                    :: 2,177
            CDSs (with protein)               :: 2,177
            Genes (RNA)                       :: 80
            rRNAs                             :: 3, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 70
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 18 of 46
            Pseudo Genes (incomplete)         :: 22 of 46
            Pseudo Genes (internal stop)      :: 12 of 46
            Pseudo Genes (multiple problems)  :: 5 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2357128
                     /organism="Weissella cibaria"
                     /mol_type="genomic DNA"
                     /strain="ff3PR"
                     /db_xref="taxon:137591"
                     /geo_loc_name="Ireland"
WGS         JWHV01000001-JWHV01000060
WGS_SCAFLD  NZ_JWHV01000001-NZ_JWHV01000060
//
LOCUS       NZ_JWHU01000000      2430822 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Weissella cibaria strain MG1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JWHU00000000
VERSION     NZ_JWHU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03223844
            Assembly: GCF_000878205.1
KEYWORDS    WGS; RefSeq.
SOURCE      Weissella cibaria
  ORGANISM  Weissella cibaria
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
REFERENCE   1  (bases 1 to 2430822)
  AUTHORS   Lynch,K.M., Lucid,A., Arendt,E.K., Sleator,R.D., Lucey,B. and
            Coffey,A.
  TITLE     Genomics of Weissella cibaria with an examination of its metabolic
            traits
  JOURNAL   Microbiology (Reading) 161 (Pt 4), 914-930 (2015)
   PUBMED   25678547
REFERENCE   2  (bases 1 to 2430822)
  AUTHORS   Lynch,K.M. and Coffey,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-NOV-2014) Biological Sciences, Cork Institute Of
            Technology, Rossa Avenue, Bishopstown, Cork, Ireland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JWHU00000000.1.
            The Weissella cibaria whole genome shotgun (WGS) project has the
            project accession NZ_JWHU00000000.  This version of the project
            (01) has the accession number NZ_JWHU01000000, and consists of
            sequences JWHU01000001-JWHU01000044.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. April-2014
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 270.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000878205.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:32:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,355
            CDSs (total)                      :: 2,286
            Genes (coding)                    :: 2,259
            CDSs (with protein)               :: 2,259
            Genes (RNA)                       :: 69
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 62
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 27
            CDSs (without protein)            :: 27
            Pseudo Genes (ambiguous residues) :: 0 of 27
            Pseudo Genes (frameshifted)       :: 11 of 27
            Pseudo Genes (incomplete)         :: 14 of 27
            Pseudo Genes (internal stop)      :: 5 of 27
            Pseudo Genes (multiple problems)  :: 2 of 27
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2430822
                     /organism="Weissella cibaria"
                     /mol_type="genomic DNA"
                     /strain="MG1"
                     /db_xref="taxon:137591"
                     /geo_loc_name="Ireland"
WGS         JWHU01000001-JWHU01000044
WGS_SCAFLD  NZ_JWHU01000001-NZ_JWHU01000044
//
LOCUS       NZ_CAQG01000000      4527941 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia enterocolitica (type O:3) str. YE12/03 isolate host faecal
            sample, whole genome shotgun sequencing project.
ACCESSION   NZ_CAQG00000000
VERSION     NZ_CAQG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA3146322
            Assembly: GCF_001050795.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia enterocolitica (type O:3) str. YE12/03
  ORGANISM  Yersinia enterocolitica (type O:3) str. YE12/03
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1
  AUTHORS   Reuter,S., Connor,T.R., Barquist,L., Walker,D., Feltwell,T.,
            Harris,S.R., Fookes,M., Fuchs,T.M., Wren,B.W., Parkhill,J.,
            McNally,A. and Thomson,N.R.
  TITLE     Parallel independent evolution of pathogenicity across the genus
            Yersinia
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4527941)
  AUTHORS   Aslett,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-JAN-2013) Pathogen Sequencing Unit, Wellcome Trust
            Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge,
            Cambridgeshire CB10 1SA, UNITED KINGDOM
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAQG00000000.1.
            The Yersinia enterocolitica (type O:3) str. YE12/03 whole genome
            shotgun (WGS) project has the project accession NZ_CAQG00000000.
            This version of the project (01) has the accession number
            NZ_CAQG01000000, and consists of sequences
            CAQG01000001-CAQG01000004.
            Data release policy http://www.sanger.ac.uk/legal/#t_2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001050795.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:53:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,108
            CDSs (total)                      :: 4,003
            Genes (coding)                    :: 3,818
            CDSs (with protein)               :: 3,818
            Genes (RNA)                       :: 105
            rRNAs                             :: 9, 7, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 7, 8 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 185
            CDSs (without protein)            :: 185
            Pseudo Genes (ambiguous residues) :: 0 of 185
            Pseudo Genes (frameshifted)       :: 86 of 185
            Pseudo Genes (incomplete)         :: 85 of 185
            Pseudo Genes (internal stop)      :: 42 of 185
            Pseudo Genes (multiple problems)  :: 26 of 185
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4527941
                     /organism="Yersinia enterocolitica (type O:3) str.
                     YE12/03"
                     /mol_type="genomic DNA"
                     /strain="YE12/03"
                     /serotype="O:3"
                     /isolate="host faecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1262466"
WGS         CAQG01000001-CAQG01000004
WGS_SCAFLD  NZ_HF933425
//
LOCUS       NZ_CAQH01000000      4665903 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia enterocolitica (type O:2) str. YE3094/96 isolate host
            faecal sample, whole genome shotgun sequencing project.
ACCESSION   NZ_CAQH00000000
VERSION     NZ_CAQH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA3146323
            Assembly: GCF_001050815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia enterocolitica (type O:2) str. YE3094/96
  ORGANISM  Yersinia enterocolitica (type O:2) str. YE3094/96
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1
  AUTHORS   Reuter,S., Connor,T.R., Barquist,L., Walker,D., Feltwell,T.,
            Harris,S.R., Fookes,M., Fuchs,T.M., Wren,B.W., Parkhill,J.,
            McNally,A. and Thomson,N.R.
  TITLE     Parallel independent evolution of pathogenicity across the genus
            Yersinia
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4665903)
  AUTHORS   Aslett,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-JAN-2013) Pathogen Sequencing Unit, Wellcome Trust
            Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge,
            Cambridgeshire CB10 1SA, UNITED KINGDOM
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAQH00000000.1.
            The Yersinia enterocolitica (type O:2) str. YE3094/96 whole genome
            shotgun (WGS) project has the project accession NZ_CAQH00000000.
            This version of the project (01) has the accession number
            NZ_CAQH01000000, and consists of sequences
            CAQH01000001-CAQH01000005.
            Data release policy http://www.sanger.ac.uk/legal/#t_2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001050815.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:57:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,338
            CDSs (total)                      :: 4,235
            Genes (coding)                    :: 3,927
            CDSs (with protein)               :: 3,927
            Genes (RNA)                       :: 103
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 308
            CDSs (without protein)            :: 308
            Pseudo Genes (ambiguous residues) :: 0 of 308
            Pseudo Genes (frameshifted)       :: 161 of 308
            Pseudo Genes (incomplete)         :: 107 of 308
            Pseudo Genes (internal stop)      :: 70 of 308
            Pseudo Genes (multiple problems)  :: 27 of 308
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4665903
                     /organism="Yersinia enterocolitica (type O:2) str.
                     YE3094/96"
                     /mol_type="genomic DNA"
                     /strain="YE3094/96"
                     /serotype="O:2"
                     /isolate="host faecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1262467"
WGS         CAQH01000001-CAQH01000005
WGS_SCAFLD  NZ_HF933426
//
LOCUS       NZ_JAHTUO010000000   5050397 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Xanthomonas campestris pv. lawsoniae strain NCPPB 579, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JAHTUO000000000
VERSION     NZ_JAHTUO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN19988991
            Assembly: GCF_019201185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Xanthomonas campestris pv. lawsoniae
  ORGANISM  Xanthomonas campestris pv. lawsoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Xanthomonas.
REFERENCE   1  (bases 1 to 5050397)
  AUTHORS   Hussein,R., Harrison,J., Studholme,D.J., Vicente,J. and Grant,M.
  TITLE     Transfer of pathovars from Xanthomonas campestris to X.
            euvesicatoria, X. citri and X. phaseoli based on genome sequence
            data
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5050397)
  AUTHORS   Hussein,R., Harrison,J., Studholme,D.J., Vicente,J. and Grant,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JUL-2021) Biosciences, University of Exeter, Geoffrey
            Pope Building, Stocker Road, Exeter, Devon EX4 4QD, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAHTUO000000000.1.
            The Xanthomonas campestris pv. lawsoniae whole genome shotgun (WGS)
            project has the project accession NZ_JAHTUO000000000.  This version
            of the project (01) has the accession number NZ_JAHTUO010000000,
            and consists of sequences JAHTUO010000001-JAHTUO010000112.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 65x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_019201185.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:40:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,388
            CDSs (total)                      :: 4,298
            Genes (coding)                    :: 4,133
            CDSs (with protein)               :: 4,133
            Genes (RNA)                       :: 90
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 36
            Pseudo Genes (total)              :: 165
            CDSs (without protein)            :: 165
            Pseudo Genes (ambiguous residues) :: 0 of 165
            Pseudo Genes (frameshifted)       :: 81 of 165
            Pseudo Genes (incomplete)         :: 90 of 165
            Pseudo Genes (internal stop)      :: 18 of 165
            Pseudo Genes (multiple problems)  :: 22 of 165
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5050397
                     /organism="Xanthomonas campestris pv. lawsoniae"
                     /mol_type="genomic DNA"
                     /strain="NCPPB 579"
                     /host="Lawsonia inermis"
                     /culture_collection="NCPPB:579"
                     /db_xref="taxon:487873"
                     /geo_loc_name="India"
                     /collected_by="M.K. Patel"
                     /pathovar="lawsoniae"
WGS         JAHTUO010000001-JAHTUO010000112
WGS_SCAFLD  NZ_JAHTUO010000001-NZ_JAHTUO010000112
//
LOCUS       NZ_CDVDRX010000000   3024934 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Vreelandella aquamarina isolate MarMAG_112035, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVDRX000000000
VERSION     NZ_CDVDRX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120739430
            Assembly: GCF_977658325.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Vreelandella aquamarina (hydrothermal vent metagenome)
  ORGANISM  Vreelandella aquamarina
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Vreelandella.
REFERENCE   1  (bases 1 to 3024934)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVDRX000000000.1.
            The Vreelandella aquamarina whole genome shotgun (WGS) project has
            the project accession NZ_CDVDRX000000000.  This version of the
            project (01) has the accession number NZ_CDVDRX010000000, and
            consists of sequences CDVDRX010000001-CDVDRX010000363.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977658325.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:33:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,164
            CDSs (total)                      :: 3,117
            Genes (coding)                    :: 2,969
            CDSs (with protein)               :: 2,969
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 148
            CDSs (without protein)            :: 148
            Pseudo Genes (ambiguous residues) :: 0 of 148
            Pseudo Genes (frameshifted)       :: 9 of 148
            Pseudo Genes (incomplete)         :: 138 of 148
            Pseudo Genes (internal stop)      :: 7 of 148
            Pseudo Genes (multiple problems)  :: 6 of 148
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3024934
                     /organism="Vreelandella aquamarina"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_112035"
                     /isolation_source="Deep-sea hydrothermal vent chimney"
                     /db_xref="taxon:77097"
                     /environmental_sample
                     /geo_loc_name="Indian Ocean"
                     /metagenome_source="hydrothermal vent metagenome"
                     /metagenomic
WGS         CDVDRX010000001-CDVDRX010000363
WGS_SCAFLD  NZ_CDVDRX010000001-NZ_CDVDRX010000363
//
LOCUS       NZ_JBUCKJ010000000   5343746 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Tunturiibacter psychrotolerans strain YFZ008, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBUCKJ000000000
VERSION     NZ_JBUCKJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53057077
            Assembly: GCF_056158165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Tunturiibacter psychrotolerans
  ORGANISM  Tunturiibacter psychrotolerans
            Bacteria; Pseudomonadati; Acidobacteriota; Terriglobia;
            Terriglobales; Acidobacteriaceae; Tunturiibacter.
REFERENCE   1  (bases 1 to 5343746)
  AUTHORS   Xiaochong,S. and Yifan,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-JAN-2026) College of Marine Life Sciences, The Ocean
            University of China, Yu Shan, Qing Dao, Shan Dong 266000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBUCKJ000000000.1.
            The Tunturiibacter psychrotolerans whole genome shotgun (WGS)
            project has the project accession NZ_JBUCKJ000000000.  This version
            of the project (01) has the accession number NZ_JBUCKJ010000000,
            and consists of sequences JBUCKJ010000001-JBUCKJ010000111.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from xiaochong Shi.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056158165.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:00:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,732
            CDSs (total)                      :: 4,670
            Genes (coding)                    :: 4,651
            CDSs (with protein)               :: 4,651
            Genes (RNA)                       :: 62
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 19
            CDSs (without protein)            :: 19
            Pseudo Genes (ambiguous residues) :: 0 of 19
            Pseudo Genes (frameshifted)       :: 0 of 19
            Pseudo Genes (incomplete)         :: 17 of 19
            Pseudo Genes (internal stop)      :: 2 of 19
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5343746
                     /organism="Tunturiibacter psychrotolerans"
                     /mol_type="genomic DNA"
                     /strain="YFZ008"
                     /isolation_source="Tundra"
                     /db_xref="taxon:3069686"
                     /geo_loc_name="Antarctica: King George Island"
                     /lat_lon="62.20 S 59.00 W"
                     /collection_date="2023-01-07"
WGS         JBUCKJ010000001-JBUCKJ010000111
WGS_SCAFLD  NZ_JBUCKJ010000001-NZ_JBUCKJ010000111
//
LOCUS       NZ_QENM01000000      2284353 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Weissella confusa strain 32, whole genome shotgun sequencing
            project.
ACCESSION   NZ_QENM00000000
VERSION     NZ_QENM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08995362
            Assembly: GCF_003284505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Weissella confusa
  ORGANISM  Weissella confusa
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
REFERENCE   1  (bases 1 to 2284353)
  AUTHORS   Terekhov,S.S., Smirnov,I.V., Malakhova,M.V., Samoilov,A.E.,
            Manolov,A.I., Nazarov,A.S., Danilov,D.V., Dubiley,S.A.,
            Osterman,I.A., Rubtsova,M.P., Kostryukova,E.S., Ziganshin,R.H.,
            Kornienko,M.A., Vanyushkina,A.A., Bukato,O.N., Ilina,E.N.,
            Vlasov,V.V., Severinov,K.V., Gabibov,A.G. and Altman,S.
  TITLE     Ultrahigh-throughput functional profiling of microbiota communities
  JOURNAL   Proc Natl Acad Sci U S A 115 (38), 9551-9556 (2018)
   PUBMED   30181282
REFERENCE   2  (bases 1 to 2284353)
  AUTHORS   Samoilov,A.E.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-APR-2018) Molecular Biology and Genetics, FRCC PCM,
            Malaya Pirogosvskaya, Moscow 119435, Russia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QENM00000000.1.
            The Weissella confusa whole genome shotgun (WGS) project has the
            project accession NZ_QENM00000000.  This version of the project
            (01) has the accession number NZ_QENM01000000, and consists of
            sequences QENM01000001-QENM01000052.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2017
            Assembly Method        :: SPAdes v. SEP-2017
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 120x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003284505.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:55:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,309
            CDSs (total)                      :: 2,199
            Genes (coding)                    :: 2,155
            CDSs (with protein)               :: 2,155
            Genes (RNA)                       :: 110
            rRNAs                             :: 8, 6, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5, 7 (16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 44
            CDSs (without protein)            :: 44
            Pseudo Genes (ambiguous residues) :: 0 of 44
            Pseudo Genes (frameshifted)       :: 13 of 44
            Pseudo Genes (incomplete)         :: 28 of 44
            Pseudo Genes (internal stop)      :: 13 of 44
            Pseudo Genes (multiple problems)  :: 9 of 44
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2284353
                     /organism="Weissella confusa"
                     /mol_type="genomic DNA"
                     /strain="32"
                     /isolation_source="saliva"
                     /host="bear"
                     /db_xref="taxon:1583"
                     /geo_loc_name="Russia: East Siberia"
                     /collection_date="2017-03"
WGS         QENM01000001-QENM01000052
WGS_SCAFLD  NZ_QENM01000001-NZ_QENM01000052
//
LOCUS       NZ_JBSWVD010000000   3336199 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Vibrio aphrogenes strain ABV2_074, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWVD000000000
VERSION     NZ_JBSWVD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861985
            Assembly: GCF_056159425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio aphrogenes
  ORGANISM  Vibrio aphrogenes
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 3336199)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWVD000000000.1.
            The Vibrio aphrogenes whole genome shotgun (WGS) project has the
            project accession NZ_JBSWVD000000000.  This version of the project
            (01) has the accession number NZ_JBSWVD010000000, and consists of
            sequences JBSWVD010000001-JBSWVD010000009.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 910x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056159425.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:10:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,021
            CDSs (total)                      :: 2,906
            Genes (coding)                    :: 2,888
            CDSs (with protein)               :: 2,888
            Genes (RNA)                       :: 115
            rRNAs                             :: 7, 7, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 7, 6 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 88
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 18
            CDSs (without protein)            :: 18
            Pseudo Genes (ambiguous residues) :: 0 of 18
            Pseudo Genes (frameshifted)       :: 4 of 18
            Pseudo Genes (incomplete)         :: 17 of 18
            Pseudo Genes (internal stop)      :: 3 of 18
            Pseudo Genes (multiple problems)  :: 4 of 18
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3336199
                     /organism="Vibrio aphrogenes"
                     /mol_type="genomic DNA"
                     /strain="ABV2_074"
                     /isolation_source="Marine"
                     /db_xref="taxon:1891186"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWVD010000001-JBSWVD010000009
WGS_SCAFLD  NZ_JBSWVD010000001-NZ_JBSWVD010000009
//
LOCUS       NZ_JBBEOC010000000   4922036 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Vibrio vulnificus strain Puj2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBBEOC000000000
VERSION     NZ_JBBEOC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40453155
            Assembly: GCF_037402815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio vulnificus
  ORGANISM  Vibrio vulnificus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4922036)
  AUTHORS   Salvador-Clavell,R., Carmona-Salido,H. and Amaro,C.
  TITLE     Vibrio vulnificus Albufera's strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4922036)
  AUTHORS   Salvador-Clavell,R., Carmona-Salido,H. and Amaro,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAR-2024) Microbiology and Ecology, University of
            Valencia, 50 Doctor Moliner, Burjassot, Valencia 46100, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBEOC000000000.1.
            The Vibrio vulnificus whole genome shotgun (WGS) project has the
            project accession NZ_JBBEOC000000000.  This version of the project
            (01) has the accession number NZ_JBBEOC010000000, and consists of
            sequences JBBEOC010000001-JBBEOC010000148.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.5.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 129x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037402815.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:48:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,472
            CDSs (total)                      :: 4,376
            Genes (coding)                    :: 4,320
            CDSs (with protein)               :: 4,320
            Genes (RNA)                       :: 96
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 87
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 56
            CDSs (without protein)            :: 56
            Pseudo Genes (ambiguous residues) :: 0 of 56
            Pseudo Genes (frameshifted)       :: 23 of 56
            Pseudo Genes (incomplete)         :: 40 of 56
            Pseudo Genes (internal stop)      :: 16 of 56
            Pseudo Genes (multiple problems)  :: 20 of 56
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4922036
                     /organism="Vibrio vulnificus"
                     /mol_type="genomic DNA"
                     /strain="Puj2"
                     /isolation_source="environmental water"
                     /db_xref="taxon:672"
                     /geo_loc_name="Spain: Albufera lake"
                     /lat_lon="39.3484 N 0.3220 W"
                     /collection_date="2023-07-03"
                     /collected_by="Universitat de Valencia"
WGS         JBBEOC010000001-JBBEOC010000148
WGS_SCAFLD  NZ_JBBEOC010000001-NZ_JBBEOC010000148
//
LOCUS       NZ_CDVLYP010000000   3359127 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Vreelandella aquamarina isolate MarMAG_112034, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVLYP000000000
VERSION     NZ_CDVLYP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120739395
            Assembly: GCF_977714165.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Vreelandella aquamarina (hydrothermal vent metagenome)
  ORGANISM  Vreelandella aquamarina
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Vreelandella.
REFERENCE   1  (bases 1 to 3359127)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVLYP000000000.1.
            The Vreelandella aquamarina whole genome shotgun (WGS) project has
            the project accession NZ_CDVLYP000000000.  This version of the
            project (01) has the accession number NZ_CDVLYP010000000, and
            consists of sequences CDVLYP010000001-CDVLYP010000486.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977714165.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:29:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,536
            CDSs (total)                      :: 3,489
            Genes (coding)                    :: 3,328
            CDSs (with protein)               :: 3,328
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 161
            CDSs (without protein)            :: 161
            Pseudo Genes (ambiguous residues) :: 0 of 161
            Pseudo Genes (frameshifted)       :: 10 of 161
            Pseudo Genes (incomplete)         :: 154 of 161
            Pseudo Genes (internal stop)      :: 2 of 161
            Pseudo Genes (multiple problems)  :: 5 of 161
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3359127
                     /organism="Vreelandella aquamarina"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_112034"
                     /isolation_source="Deep-sea hydrothermal vent chimney"
                     /db_xref="taxon:77097"
                     /environmental_sample
                     /geo_loc_name="Indian Ocean"
                     /metagenome_source="hydrothermal vent metagenome"
                     /metagenomic
WGS         CDVLYP010000001-CDVLYP010000486
WGS_SCAFLD  NZ_CDVLYP010000001-NZ_CDVLYP010000486
//
LOCUS       NZ_JBSWUH010000000   5852766 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Vibrio owensii strain ABH2_001, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWUH000000000
VERSION     NZ_JBSWUH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862013
            Assembly: GCF_056158965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio owensii
  ORGANISM  Vibrio owensii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 5852766)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWUH000000000.1.
            The Vibrio owensii whole genome shotgun (WGS) project has the
            project accession NZ_JBSWUH000000000.  This version of the project
            (01) has the accession number NZ_JBSWUH010000000, and consists of
            sequences JBSWUH010000001-JBSWUH010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 297x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056158965.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:12:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,258
            CDSs (total)                      :: 5,103
            Genes (coding)                    :: 5,073
            CDSs (with protein)               :: 5,073
            Genes (RNA)                       :: 155
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 126
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 30
            CDSs (without protein)            :: 30
            Pseudo Genes (ambiguous residues) :: 0 of 30
            Pseudo Genes (frameshifted)       :: 20 of 30
            Pseudo Genes (incomplete)         :: 11 of 30
            Pseudo Genes (internal stop)      :: 4 of 30
            Pseudo Genes (multiple problems)  :: 4 of 30
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5852766
                     /organism="Vibrio owensii"
                     /mol_type="genomic DNA"
                     /strain="ABH2_001"
                     /isolation_source="Marine"
                     /db_xref="taxon:696485"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWUH010000001-JBSWUH010000004
WGS_SCAFLD  NZ_JBSWUH010000001-NZ_JBSWUH010000004
//
LOCUS       NZ_JBBEOA010000000   5128574 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Vibrio vulnificus strain Permar1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBBEOA000000000
VERSION     NZ_JBBEOA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40453157
            Assembly: GCF_037402605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio vulnificus
  ORGANISM  Vibrio vulnificus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 5128574)
  AUTHORS   Salvador-Clavell,R., Carmona-Salido,H. and Amaro,C.
  TITLE     Vibrio vulnificus Albufera's strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5128574)
  AUTHORS   Salvador-Clavell,R., Carmona-Salido,H. and Amaro,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAR-2024) Microbiology and Ecology, University of
            Valencia, 50 Doctor Moliner, Burjassot, Valencia 46100, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBEOA000000000.1.
            The Vibrio vulnificus whole genome shotgun (WGS) project has the
            project accession NZ_JBBEOA000000000.  This version of the project
            (01) has the accession number NZ_JBBEOA010000000, and consists of
            sequences JBBEOA010000001-JBBEOA010000117.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.5.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037402605.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:52:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,687
            CDSs (total)                      :: 4,598
            Genes (coding)                    :: 4,524
            CDSs (with protein)               :: 4,524
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 74
            CDSs (without protein)            :: 74
            Pseudo Genes (ambiguous residues) :: 0 of 74
            Pseudo Genes (frameshifted)       :: 25 of 74
            Pseudo Genes (incomplete)         :: 54 of 74
            Pseudo Genes (internal stop)      :: 11 of 74
            Pseudo Genes (multiple problems)  :: 13 of 74
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5128574
                     /organism="Vibrio vulnificus"
                     /mol_type="genomic DNA"
                     /strain="Permar1"
                     /isolation_source="environmental water"
                     /db_xref="taxon:672"
                     /geo_loc_name="Spain: Albufera lake"
                     /lat_lon="39.3083 N 0.2915 W"
                     /collection_date="2023-04-23"
                     /collected_by="Universitat de Valencia"
WGS         JBBEOA010000001-JBBEOA010000117
WGS_SCAFLD  NZ_JBBEOA010000001-NZ_JBBEOA010000117
//
LOCUS       NZ_JBBEOB010000000   4940129 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Vibrio vulnificus strain Puj3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBBEOB000000000
VERSION     NZ_JBBEOB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40453156
            Assembly: GCF_037402755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio vulnificus
  ORGANISM  Vibrio vulnificus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4940129)
  AUTHORS   Salvador-Clavell,R., Carmona-Salido,H. and Amaro,C.
  TITLE     Vibrio vulnificus Albufera's strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4940129)
  AUTHORS   Salvador-Clavell,R., Carmona-Salido,H. and Amaro,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAR-2024) Microbiology and Ecology, University of
            Valencia, 50 Doctor Moliner, Burjassot, Valencia 46100, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBEOB000000000.1.
            The Vibrio vulnificus whole genome shotgun (WGS) project has the
            project accession NZ_JBBEOB000000000.  This version of the project
            (01) has the accession number NZ_JBBEOB010000000, and consists of
            sequences JBBEOB010000001-JBBEOB010000121.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.5.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 117x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037402755.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:45:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,459
            CDSs (total)                      :: 4,368
            Genes (coding)                    :: 4,297
            CDSs (with protein)               :: 4,297
            Genes (RNA)                       :: 91
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 83
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 19 of 71
            Pseudo Genes (incomplete)         :: 58 of 71
            Pseudo Genes (internal stop)      :: 14 of 71
            Pseudo Genes (multiple problems)  :: 18 of 71
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4940129
                     /organism="Vibrio vulnificus"
                     /mol_type="genomic DNA"
                     /strain="Puj3"
                     /isolation_source="environmental water"
                     /db_xref="taxon:672"
                     /geo_loc_name="Spain: Albufera lake"
                     /lat_lon="39.3484 N 0.3220 W"
                     /collection_date="2023-07-03"
                     /collected_by="Universitat de Valencia"
WGS         JBBEOB010000001-JBBEOB010000121
WGS_SCAFLD  NZ_JBBEOB010000001-NZ_JBBEOB010000121
//
LOCUS       NZ_JBJJNY010000000   1398879 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Weissella kandleri strain YT103, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJJNY000000000
VERSION     NZ_JBJJNY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45020880
            Assembly: GCF_045504165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Weissella kandleri
  ORGANISM  Weissella kandleri
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Weissella.
REFERENCE   1  (bases 1 to 1398879)
  AUTHORS   Zhu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2024) College of Life Science, Sichuan Normal
            University, Jing an road No. 5, Chengdu, Sichuan 610066, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJJNY000000000.1.
            The Weissella kandleri whole genome shotgun (WGS) project has the
            project accession NZ_JBJJNY000000000.  This version of the project
            (01) has the accession number NZ_JBJJNY010000000, and consists of
            sequences JBJJNY010000001-JBJJNY010000037.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1083.27x
            Sequencing Technology  :: Illumina HiSeq; PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045504165.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:46:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,383
            CDSs (total)                      :: 1,336
            Genes (coding)                    :: 1,321
            CDSs (with protein)               :: 1,321
            Genes (RNA)                       :: 47
            rRNAs                             :: 2, 1 (16S, 23S)
            partial rRNAs                     :: 2, 1 (16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 15
            CDSs (without protein)            :: 15
            Pseudo Genes (ambiguous residues) :: 0 of 15
            Pseudo Genes (frameshifted)       :: 4 of 15
            Pseudo Genes (incomplete)         :: 11 of 15
            Pseudo Genes (internal stop)      :: 5 of 15
            Pseudo Genes (multiple problems)  :: 3 of 15
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1398879
                     /organism="Weissella kandleri"
                     /mol_type="genomic DNA"
                     /strain="YT103"
                     /host="weaned Rex rabbits"
                     /db_xref="taxon:1616"
                     /geo_loc_name="China: Sichuan"
                     /collection_date="2020-07-20"
WGS         JBJJNY010000001-JBJJNY010000037
WGS_SCAFLD  NZ_JBJJNY010000001-NZ_JBJJNY010000037
//
LOCUS       NZ_JBSWVW010000000   4386130 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Vibrio sp. ABH4_348, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWVW000000000
VERSION     NZ_JBSWVW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861965
            Assembly: GCF_056159765.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio sp. ABH4_348
  ORGANISM  Vibrio sp. ABH4_348
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4386130)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWVW000000000.1.
            The Vibrio sp. ABH4_348 whole genome shotgun (WGS) project has the
            project accession NZ_JBSWVW000000000.  This version of the project
            (01) has the accession number NZ_JBSWVW010000000, and consists of
            sequences JBSWVW010000001-JBSWVW010000015.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1254x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056159765.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:19:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,075
            CDSs (total)                      :: 3,953
            Genes (coding)                    :: 3,927
            CDSs (with protein)               :: 3,927
            Genes (RNA)                       :: 122
            rRNAs                             :: 7, 9, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 6, 6 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 2 (16S, 23S)
            tRNAs                             :: 94
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 9 of 26
            Pseudo Genes (incomplete)         :: 18 of 26
            Pseudo Genes (internal stop)      :: 5 of 26
            Pseudo Genes (multiple problems)  :: 5 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4386130
                     /organism="Vibrio sp. ABH4_348"
                     /mol_type="genomic DNA"
                     /strain="ABH4_348"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477735"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-11-21"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWVW010000001-JBSWVW010000015
WGS_SCAFLD  NZ_JBSWVW010000001-NZ_JBSWVW010000015
//
LOCUS       NZ_JBSWTS010000000   4158791 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Thalassovita sp. ABM4_323, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWTS000000000
VERSION     NZ_JBSWTS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51862031
            Assembly: GCF_056158665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Thalassovita sp. ABM4_323
  ORGANISM  Thalassovita sp. ABM4_323
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Thalassovita.
REFERENCE   1  (bases 1 to 4158791)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWTS000000000.1.
            The Thalassovita sp. ABM4_323 whole genome shotgun (WGS) project
            has the project accession NZ_JBSWTS000000000.  This version of the
            project (01) has the accession number NZ_JBSWTS010000000, and
            consists of sequences JBSWTS010000001-JBSWTS010000007.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 718x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056158665.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:10:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,148
            CDSs (total)                      :: 4,091
            Genes (coding)                    :: 4,002
            CDSs (with protein)               :: 4,002
            Genes (RNA)                       :: 57
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 89
            CDSs (without protein)            :: 89
            Pseudo Genes (ambiguous residues) :: 0 of 89
            Pseudo Genes (frameshifted)       :: 35 of 89
            Pseudo Genes (incomplete)         :: 56 of 89
            Pseudo Genes (internal stop)      :: 23 of 89
            Pseudo Genes (multiple problems)  :: 22 of 89
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4158791
                     /organism="Thalassovita sp. ABM4_323"
                     /mol_type="genomic DNA"
                     /strain="ABM4_323"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477707"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWTS010000001-JBSWTS010000007
WGS_SCAFLD  NZ_JBSWTS010000001-NZ_JBSWTS010000007
//
LOCUS       NZ_JBSWWM010000000   5191473 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Vibrio alginolyticus strain ABD4_192, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSWWM000000000
VERSION     NZ_JBSWWM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861946
            Assembly: GCF_056160085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio alginolyticus
  ORGANISM  Vibrio alginolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 5191473)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWWM000000000.1.
            The Vibrio alginolyticus whole genome shotgun (WGS) project has the
            project accession NZ_JBSWWM000000000.  This version of the project
            (01) has the accession number NZ_JBSWWM010000000, and consists of
            sequences JBSWWM010000001-JBSWWM010000003.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 851x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056160085.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:23:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,726
            CDSs (total)                      :: 4,556
            Genes (coding)                    :: 4,527
            CDSs (with protein)               :: 4,527
            Genes (RNA)                       :: 170
            rRNAs                             :: 13, 12, 12 (5S, 16S, 23S)
            complete rRNAs                    :: 13, 12, 12 (5S, 16S, 23S)
            tRNAs                             :: 129
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 15 of 29
            Pseudo Genes (incomplete)         :: 17 of 29
            Pseudo Genes (internal stop)      :: 6 of 29
            Pseudo Genes (multiple problems)  :: 7 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5191473
                     /organism="Vibrio alginolyticus"
                     /mol_type="genomic DNA"
                     /strain="ABD4_192"
                     /isolation_source="Marine"
                     /db_xref="taxon:663"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-07-26"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWWM010000001-JBSWWM010000003
WGS_SCAFLD  NZ_JBSWWM010000001-NZ_JBSWWM010000003
//
LOCUS       NZ_JBBEOD010000000   4851126 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Vibrio vulnificus strain Puj1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBBEOD000000000
VERSION     NZ_JBBEOD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40453154
            Assembly: GCF_037402835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio vulnificus
  ORGANISM  Vibrio vulnificus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4851126)
  AUTHORS   Salvador-Clavell,R., Carmona-Salido,H. and Amaro,C.
  TITLE     Vibrio vulnificus Albufera's strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4851126)
  AUTHORS   Salvador-Clavell,R., Carmona-Salido,H. and Amaro,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAR-2024) Microbiology and Ecology, University of
            Valencia, 50 Doctor Moliner, Burjassot, Valencia 46100, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBEOD000000000.1.
            The Vibrio vulnificus whole genome shotgun (WGS) project has the
            project accession NZ_JBBEOD000000000.  This version of the project
            (01) has the accession number NZ_JBBEOD010000000, and consists of
            sequences JBBEOD010000001-JBBEOD010000057.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.5.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 141x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037402835.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:38:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,348
            CDSs (total)                      :: 4,254
            Genes (coding)                    :: 4,213
            CDSs (with protein)               :: 4,213
            Genes (RNA)                       :: 94
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 86
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 41
            CDSs (without protein)            :: 41
            Pseudo Genes (ambiguous residues) :: 0 of 41
            Pseudo Genes (frameshifted)       :: 12 of 41
            Pseudo Genes (incomplete)         :: 28 of 41
            Pseudo Genes (internal stop)      :: 7 of 41
            Pseudo Genes (multiple problems)  :: 6 of 41
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4851126
                     /organism="Vibrio vulnificus"
                     /mol_type="genomic DNA"
                     /strain="Puj1"
                     /isolation_source="environmental water"
                     /db_xref="taxon:672"
                     /geo_loc_name="Spain: Albufera lake"
                     /lat_lon="39.3484 N 0.3220 W"
                     /collection_date="2023-04-23"
                     /collected_by="Universitat de Valencia"
WGS         JBBEOD010000001-JBBEOD010000057
WGS_SCAFLD  NZ_JBBEOD010000001-NZ_JBBEOD010000057
//
LOCUS       NZ_JBSWWG010000000   5913913 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Vibrio owensii strain ABH2_043, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWWG000000000
VERSION     NZ_JBSWWG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861954
            Assembly: GCF_056159965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio owensii
  ORGANISM  Vibrio owensii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 5913913)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWWG000000000.1.
            The Vibrio owensii whole genome shotgun (WGS) project has the
            project accession NZ_JBSWWG000000000.  This version of the project
            (01) has the accession number NZ_JBSWWG010000000, and consists of
            sequences JBSWWG010000001-JBSWWG010000018.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 380x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056159965.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:30:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,311
            CDSs (total)                      :: 5,154
            Genes (coding)                    :: 5,133
            CDSs (with protein)               :: 5,133
            Genes (RNA)                       :: 157
            rRNAs                             :: 9, 10, 10 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 124
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 11 of 21
            Pseudo Genes (incomplete)         :: 10 of 21
            Pseudo Genes (internal stop)      :: 4 of 21
            Pseudo Genes (multiple problems)  :: 3 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5913913
                     /organism="Vibrio owensii"
                     /mol_type="genomic DNA"
                     /strain="ABH2_043"
                     /isolation_source="Marine"
                     /db_xref="taxon:696485"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWWG010000001-JBSWWG010000018
WGS_SCAFLD  NZ_JBSWWG010000001-NZ_JBSWWG010000018
//
LOCUS       NZ_JAILTT010000000   5182337 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Xenorhabdus bovienii strain intermedium LD_45, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAILTT000000000
VERSION     NZ_JAILTT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN19312201
            Assembly: GCF_029105075.1
KEYWORDS    WGS; RefSeq.
SOURCE      Xenorhabdus bovienii
  ORGANISM  Xenorhabdus bovienii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Xenorhabdus.
REFERENCE   1  (bases 1 to 5182337)
  AUTHORS   Papudeshi,B. and Bashey-Visser,F.
  TITLE     Drivers of population structure in a mutualist symbiont,
            Xenorhabdus bovienii
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5182337)
  AUTHORS   Papudeshi,B. and Bashey-Visser,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-AUG-2021) Bedford Park, Xenorhabdus project-Indiana
            University, Bedford Park, Adelaide, South Australia, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAILTT000000000.1.
            The Xenorhabdus bovienii whole genome shotgun (WGS) project has the
            project accession NZ_JAILTT000000000.  This version of the project
            (01) has the accession number NZ_JAILTT010000000, and consists of
            sequences JAILTT010000001-JAILTT010000927.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 01-JAN-2017
            Assembly Method        :: SPAdes v. 3.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 32.2398x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029105075.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:56:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,404
            CDSs (total)                      :: 5,312
            Genes (coding)                    :: 4,819
            CDSs (with protein)               :: 4,819
            Genes (RNA)                       :: 92
            rRNAs                             :: 10, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 75
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 493
            CDSs (without protein)            :: 493
            Pseudo Genes (ambiguous residues) :: 0 of 493
            Pseudo Genes (frameshifted)       :: 62 of 493
            Pseudo Genes (incomplete)         :: 443 of 493
            Pseudo Genes (internal stop)      :: 46 of 493
            Pseudo Genes (multiple problems)  :: 49 of 493
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5182337
                     /organism="Xenorhabdus bovienii"
                     /mol_type="genomic DNA"
                     /strain="intermedium LD_45"
                     /isolation_source="nematodes"
                     /host="Steinernema affine"
                     /db_xref="taxon:40576"
                     /geo_loc_name="USA: Indiana, Lilly Dickey Woods IURTP"
                     /lat_lon="39.23914364 N 86.21652154 W"
                     /collection_date="2014-09-15"
                     /collected_by="F. Bashey"
WGS         JAILTT010000001-JAILTT010000927
WGS_SCAFLD  NZ_JAILTT010000001-NZ_JAILTT010000927
//
LOCUS       NZ_JBBEOE010000000   4962357 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Vibrio vulnificus strain Per5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBBEOE000000000
VERSION     NZ_JBBEOE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40453153
            Assembly: GCF_037402695.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio vulnificus
  ORGANISM  Vibrio vulnificus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4962357)
  AUTHORS   Salvador-Clavell,R., Carmona-Salido,H. and Amaro,C.
  TITLE     Vibrio vulnificus Albufera's strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4962357)
  AUTHORS   Salvador-Clavell,R., Carmona-Salido,H. and Amaro,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAR-2024) Microbiology and Ecology, University of
            Valencia, 50 Doctor Moliner, Burjassot, Valencia 46100, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBEOE000000000.1.
            The Vibrio vulnificus whole genome shotgun (WGS) project has the
            project accession NZ_JBBEOE000000000.  This version of the project
            (01) has the accession number NZ_JBBEOE010000000, and consists of
            sequences JBBEOE010000001-JBBEOE010000103.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.5.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 123x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037402695.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:53:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,498
            CDSs (total)                      :: 4,407
            Genes (coding)                    :: 4,353
            CDSs (with protein)               :: 4,353
            Genes (RNA)                       :: 91
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 82
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 18 of 54
            Pseudo Genes (incomplete)         :: 42 of 54
            Pseudo Genes (internal stop)      :: 9 of 54
            Pseudo Genes (multiple problems)  :: 13 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4962357
                     /organism="Vibrio vulnificus"
                     /mol_type="genomic DNA"
                     /strain="Per5"
                     /isolation_source="environmental water"
                     /db_xref="taxon:672"
                     /geo_loc_name="Spain: Albufera lake"
                     /lat_lon="39.3084 N 0.2938 W"
                     /collection_date="2023-07-03"
                     /collected_by="Universitat de Valencia"
WGS         JBBEOE010000001-JBBEOE010000103
WGS_SCAFLD  NZ_JBBEOE010000001-NZ_JBBEOE010000103
//
LOCUS       NZ_JBSWWL010000000   4746786 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Tritonibacter mobilis strain ABD4_341, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSWWL000000000
VERSION     NZ_JBSWWL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861949
            Assembly: GCF_056160065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Tritonibacter mobilis
  ORGANISM  Tritonibacter mobilis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Tritonibacter.
REFERENCE   1  (bases 1 to 4746786)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWWL000000000.1.
            The Tritonibacter mobilis whole genome shotgun (WGS) project has
            the project accession NZ_JBSWWL000000000.  This version of the
            project (01) has the accession number NZ_JBSWWL010000000, and
            consists of sequences JBSWWL010000001-JBSWWL010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 869x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056160065.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:18:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,471
            CDSs (total)                      :: 4,398
            Genes (coding)                    :: 4,328
            CDSs (with protein)               :: 4,328
            Genes (RNA)                       :: 73
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 25 of 70
            Pseudo Genes (incomplete)         :: 53 of 70
            Pseudo Genes (internal stop)      :: 15 of 70
            Pseudo Genes (multiple problems)  :: 19 of 70
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4746786
                     /organism="Tritonibacter mobilis"
                     /mol_type="genomic DNA"
                     /strain="ABD4_341"
                     /isolation_source="Marine"
                     /db_xref="taxon:379347"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-10-31"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWWL010000001-JBSWWL010000004
WGS_SCAFLD  NZ_JBSWWL010000001-NZ_JBSWWL010000004
//
LOCUS       NZ_JBSWWH010000000   5852207 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Vibrio owensii strain ABH2_014, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWWH000000000
VERSION     NZ_JBSWWH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861953
            Assembly: GCF_056159985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio owensii
  ORGANISM  Vibrio owensii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 5852207)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWWH000000000.1.
            The Vibrio owensii whole genome shotgun (WGS) project has the
            project accession NZ_JBSWWH000000000.  This version of the project
            (01) has the accession number NZ_JBSWWH010000000, and consists of
            sequences JBSWWH010000001-JBSWWH010000009.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 333x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056159985.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:29:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,263
            CDSs (total)                      :: 5,093
            Genes (coding)                    :: 5,077
            CDSs (with protein)               :: 5,077
            Genes (RNA)                       :: 170
            rRNAs                             :: 11, 12, 12 (5S, 16S, 23S)
            complete rRNAs                    :: 11, 10, 10 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 131
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 6 of 16
            Pseudo Genes (incomplete)         :: 10 of 16
            Pseudo Genes (internal stop)      :: 6 of 16
            Pseudo Genes (multiple problems)  :: 4 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5852207
                     /organism="Vibrio owensii"
                     /mol_type="genomic DNA"
                     /strain="ABH2_014"
                     /isolation_source="Marine"
                     /db_xref="taxon:696485"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWWH010000001-JBSWWH010000009
WGS_SCAFLD  NZ_JBSWWH010000001-NZ_JBSWWH010000009
//
LOCUS       NZ_JBBENZ010000000   4907191 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Vibrio vulnificus strain Permar2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBBENZ000000000
VERSION     NZ_JBBENZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40453158
            Assembly: GCF_037407335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio vulnificus
  ORGANISM  Vibrio vulnificus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4907191)
  AUTHORS   Salvador-Clavell,R., Carmona-Salido,H. and Amaro,C.
  TITLE     Vibrio vulnificus Albufera's strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4907191)
  AUTHORS   Salvador-Clavell,R., Carmona-Salido,H. and Amaro,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAR-2024) Microbiology and Ecology, University of
            Valencia, 50 Doctor Moliner, Burjassot, Valencia 46100, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBENZ000000000.1.
            The Vibrio vulnificus whole genome shotgun (WGS) project has the
            project accession NZ_JBBENZ000000000.  This version of the project
            (01) has the accession number NZ_JBBENZ010000000, and consists of
            sequences JBBENZ010000001-JBBENZ010000129.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.5.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 93x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037407335.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:50:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,479
            CDSs (total)                      :: 4,388
            Genes (coding)                    :: 4,322
            CDSs (with protein)               :: 4,322
            Genes (RNA)                       :: 91
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 3 (16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 66
            CDSs (without protein)            :: 66
            Pseudo Genes (ambiguous residues) :: 0 of 66
            Pseudo Genes (frameshifted)       :: 30 of 66
            Pseudo Genes (incomplete)         :: 41 of 66
            Pseudo Genes (internal stop)      :: 14 of 66
            Pseudo Genes (multiple problems)  :: 16 of 66
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4907191
                     /organism="Vibrio vulnificus"
                     /mol_type="genomic DNA"
                     /strain="Permar2"
                     /isolation_source="environmental water"
                     /db_xref="taxon:672"
                     /geo_loc_name="Spain: Albufera lake"
                     /lat_lon="39.3083 N 0.2915 W"
                     /collection_date="2023-07-03"
                     /collected_by="Universitat de Valencia"
WGS         JBBENZ010000001-JBBENZ010000129
WGS_SCAFLD  NZ_JBBENZ010000001-NZ_JBBENZ010000129
//
LOCUS       NZ_CDVNOO010000000   3342285 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Vreelandella aquamarina isolate MarMAG_112036, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVNOO000000000
VERSION     NZ_CDVNOO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120739467
            Assembly: GCF_977725045.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Vreelandella aquamarina (hydrothermal vent metagenome)
  ORGANISM  Vreelandella aquamarina
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Vreelandella.
REFERENCE   1  (bases 1 to 3342285)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVNOO000000000.1.
            The Vreelandella aquamarina whole genome shotgun (WGS) project has
            the project accession NZ_CDVNOO000000000.  This version of the
            project (01) has the accession number NZ_CDVNOO010000000, and
            consists of sequences CDVNOO010000001-CDVNOO010000554.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977725045.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:30:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,555
            CDSs (total)                      :: 3,511
            Genes (coding)                    :: 3,362
            CDSs (with protein)               :: 3,362
            Genes (RNA)                       :: 44
            tRNAs                             :: 41
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 149
            CDSs (without protein)            :: 149
            Pseudo Genes (ambiguous residues) :: 0 of 149
            Pseudo Genes (frameshifted)       :: 9 of 149
            Pseudo Genes (incomplete)         :: 143 of 149
            Pseudo Genes (internal stop)      :: 4 of 149
            Pseudo Genes (multiple problems)  :: 6 of 149
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3342285
                     /organism="Vreelandella aquamarina"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_112036"
                     /isolation_source="Deep-sea hydrothermal vent chimney"
                     /db_xref="taxon:77097"
                     /environmental_sample
                     /geo_loc_name="Indian Ocean"
                     /metagenome_source="hydrothermal vent metagenome"
                     /metagenomic
WGS         CDVNOO010000001-CDVNOO010000554
WGS_SCAFLD  NZ_CDVNOO010000001-NZ_CDVNOO010000554
//
LOCUS       NZ_JBSWXT010000000   4073672 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Vannielia sp. ABF1_015, whole genome shotgun sequencing project.
ACCESSION   NZ_JBSWXT000000000
VERSION     NZ_JBSWXT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861912
            Assembly: GCF_056160745.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vannielia sp. ABF1_015
  ORGANISM  Vannielia sp. ABF1_015
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Vannielia.
REFERENCE   1  (bases 1 to 4073672)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWXT000000000.1.
            The Vannielia sp. ABF1_015 whole genome shotgun (WGS) project has
            the project accession NZ_JBSWXT000000000.  This version of the
            project (01) has the accession number NZ_JBSWXT010000000, and
            consists of sequences JBSWXT010000001-JBSWXT010000005.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 119x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056160745.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:41:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,070
            CDSs (total)                      :: 4,021
            Genes (coding)                    :: 4,005
            CDSs (with protein)               :: 4,005
            Genes (RNA)                       :: 49
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 7 of 16
            Pseudo Genes (incomplete)         :: 14 of 16
            Pseudo Genes (internal stop)      :: 5 of 16
            Pseudo Genes (multiple problems)  :: 7 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4073672
                     /organism="Vannielia sp. ABF1_015"
                     /mol_type="genomic DNA"
                     /strain="ABF1_015"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477763"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2024-02-16"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWXT010000001-JBSWXT010000005
WGS_SCAFLD  NZ_JBSWXT010000001-NZ_JBSWXT010000005
//
LOCUS       NZ_JBSWWA010000000   4688714 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Tritonibacter mobilis strain ABH4_047, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBSWWA000000000
VERSION     NZ_JBSWWA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861961
            Assembly: GCF_056159865.1
KEYWORDS    WGS; RefSeq.
SOURCE      Tritonibacter mobilis
  ORGANISM  Tritonibacter mobilis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Tritonibacter.
REFERENCE   1  (bases 1 to 4688714)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWWA000000000.1.
            The Tritonibacter mobilis whole genome shotgun (WGS) project has
            the project accession NZ_JBSWWA000000000.  This version of the
            project (01) has the accession number NZ_JBSWWA010000000, and
            consists of sequences JBSWWA010000001-JBSWWA010000007.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 542x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056159865.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:26:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,421
            CDSs (total)                      :: 4,349
            Genes (coding)                    :: 4,288
            CDSs (with protein)               :: 4,288
            Genes (RNA)                       :: 72
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 61
            CDSs (without protein)            :: 61
            Pseudo Genes (ambiguous residues) :: 0 of 61
            Pseudo Genes (frameshifted)       :: 25 of 61
            Pseudo Genes (incomplete)         :: 49 of 61
            Pseudo Genes (internal stop)      :: 10 of 61
            Pseudo Genes (multiple problems)  :: 20 of 61
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4688714
                     /organism="Tritonibacter mobilis"
                     /mol_type="genomic DNA"
                     /strain="ABH4_047"
                     /isolation_source="Marine"
                     /db_xref="taxon:379347"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWWA010000001-JBSWWA010000007
WGS_SCAFLD  NZ_JBSWWA010000001-NZ_JBSWWA010000007
//
LOCUS       NZ_ADSG01000000      4325798 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis G8786, whole genome shotgun sequencing project.
ACCESSION   NZ_ADSG00000000
VERSION     NZ_ADSG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403080
            Assembly: GCF_000324925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis G8786
  ORGANISM  Yersinia pestis G8786
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4325798)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4325798)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADSG00000000.1.
            The Yersinia pestis G8786 whole genome shotgun (WGS) project has
            the project accession NZ_ADSG00000000.  This version of the project
            (01) has the accession number NZ_ADSG01000000, and consists of
            sequences ADSG01000001-ADSG01000829.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 58X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000324925.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:27:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,115
            CDSs (total)                      :: 4,084
            Genes (coding)                    :: 3,803
            CDSs (with protein)               :: 3,803
            Genes (RNA)                       :: 31
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 20
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 281
            CDSs (without protein)            :: 281
            Pseudo Genes (ambiguous residues) :: 0 of 281
            Pseudo Genes (frameshifted)       :: 94 of 281
            Pseudo Genes (incomplete)         :: 189 of 281
            Pseudo Genes (internal stop)      :: 21 of 281
            Pseudo Genes (multiple problems)  :: 21 of 281
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4325798
                     /organism="Yersinia pestis G8786"
                     /mol_type="genomic DNA"
                     /strain="G8786"
                     /db_xref="taxon:755957"
WGS         ADSG01000001-ADSG01000829
WGS_SCAFLD  NZ_ADSG01000001-NZ_ADSG01000829
//
LOCUS       NZ_JBSWYI010000000   5803922 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Vibrio owensii strain AWQ4_253, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWYI000000000
VERSION     NZ_JBSWYI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861897
            Assembly: GCF_056161005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio owensii
  ORGANISM  Vibrio owensii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 5803922)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWYI000000000.1.
            The Vibrio owensii whole genome shotgun (WGS) project has the
            project accession NZ_JBSWYI000000000.  This version of the project
            (01) has the accession number NZ_JBSWYI010000000, and consists of
            sequences JBSWYI010000001-JBSWYI010000068.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 188x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161005.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:01:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,229
            CDSs (total)                      :: 5,062
            Genes (coding)                    :: 5,035
            CDSs (with protein)               :: 5,035
            Genes (RNA)                       :: 167
            rRNAs                             :: 11, 9, 10 (5S, 16S, 23S)
            complete rRNAs                    :: 5 (5S)
            partial rRNAs                     :: 6, 9, 10 (5S, 16S, 23S)
            tRNAs                             :: 133
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 27
            CDSs (without protein)            :: 27
            Pseudo Genes (ambiguous residues) :: 0 of 27
            Pseudo Genes (frameshifted)       :: 5 of 27
            Pseudo Genes (incomplete)         :: 19 of 27
            Pseudo Genes (internal stop)      :: 6 of 27
            Pseudo Genes (multiple problems)  :: 3 of 27
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5803922
                     /organism="Vibrio owensii"
                     /mol_type="genomic DNA"
                     /strain="AWQ4_253"
                     /isolation_source="Marine"
                     /db_xref="taxon:696485"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-10-31"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWYI010000001-JBSWYI010000068
WGS_SCAFLD  NZ_JBSWYI010000001-NZ_JBSWYI010000068
//
LOCUS       NZ_JBSWYE010000000   5841678 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Vibrio harveyi strain AWX4_204, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWYE000000000
VERSION     NZ_JBSWYE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861901
            Assembly: GCF_056160965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio harveyi
  ORGANISM  Vibrio harveyi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 5841678)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWYE000000000.1.
            The Vibrio harveyi whole genome shotgun (WGS) project has the
            project accession NZ_JBSWYE000000000.  This version of the project
            (01) has the accession number NZ_JBSWYE010000000, and consists of
            sequences JBSWYE010000001-JBSWYE010000100.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 144x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056160965.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 04:03:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,372
            CDSs (total)                      :: 5,241
            Genes (coding)                    :: 5,184
            CDSs (with protein)               :: 5,184
            Genes (RNA)                       :: 131
            rRNAs                             :: 6, 4, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 3, 4, 3 (5S, 16S, 23S)
            tRNAs                             :: 114
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 57
            CDSs (without protein)            :: 57
            Pseudo Genes (ambiguous residues) :: 0 of 57
            Pseudo Genes (frameshifted)       :: 22 of 57
            Pseudo Genes (incomplete)         :: 42 of 57
            Pseudo Genes (internal stop)      :: 18 of 57
            Pseudo Genes (multiple problems)  :: 17 of 57
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5841678
                     /organism="Vibrio harveyi"
                     /mol_type="genomic DNA"
                     /strain="AWX4_204"
                     /isolation_source="Marine"
                     /db_xref="taxon:669"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-10-31"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWYE010000001-JBSWYE010000100
WGS_SCAFLD  NZ_JBSWYE010000001-NZ_JBSWYE010000100
//
LOCUS       NZ_JYJP01000000      4811405 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Vibrio mexicanus strain CAIM 1540, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JYJP00000000
VERSION     NZ_JYJP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03339753
            Assembly: GCF_001012815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio mexicanus
  ORGANISM  Vibrio mexicanus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4811405)
  AUTHORS   Gonzalez-Castillo,A., Enciso-Ibarrra,J., Bolan-Mejia,M.C.,
            Balboa,S., Lasa,A., Romalde,J.L., Cabanillas-Beltran,H. and
            Gomez-Gil,B.
  TITLE     Vibrio mexicanus sp. nov., isolated from a cultured oyster
            Crassostrea corteziensis
  JOURNAL   Antonie Van Leeuwenhoek 108 (2), 355-364 (2015)
   PUBMED   26021481
REFERENCE   2  (bases 1 to 4811405)
  AUTHORS   Gonzalez-Castillo,A., Gomez-Gil,B. and Enciso-Ibarra,J.
  TITLE     Vibrio sp. CAIM 1540T
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 4811405)
  AUTHORS   Gonzalez-Castillo,A., Gomez-Gil,B. and Enciso-Ibarra,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-FEB-2015) Bacteriology, CIAD, A.C. Mazatlan Unit for
            Aquaculture, Av. Sabalo-Cerritos, Mazatlan, Sinaloa 82000, Mexico
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JYJP00000000.1.
            The Vibrio mexicanus whole genome shotgun (WGS) project has the
            project accession NZ_JYJP00000000.  This version of the project
            (01) has the accession number NZ_JYJP01000000, and consists of
            sequences JYJP01000001-JYJP01000147.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2014
            Assembly Method        :: Newbler v. 2.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 23.0x
            Sequencing Technology  :: IonTorrent
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001012815.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:53:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,628
            CDSs (total)                      :: 4,553
            Genes (coding)                    :: 3,730
            CDSs (with protein)               :: 3,730
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 823
            CDSs (without protein)            :: 823
            Pseudo Genes (ambiguous residues) :: 0 of 823
            Pseudo Genes (frameshifted)       :: 756 of 823
            Pseudo Genes (incomplete)         :: 79 of 823
            Pseudo Genes (internal stop)      :: 10 of 823
            Pseudo Genes (multiple problems)  :: 20 of 823
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4811405
                     /organism="Vibrio mexicanus"
                     /mol_type="genomic DNA"
                     /strain="CAIM 1540"
                     /isolation_source="seawater"
                     /host="Crassostrea corteziensis"
                     /type_material="type strain of Vibrio mexicanus"
                     /db_xref="taxon:1004326"
                     /geo_loc_name="Mexico: La Cruz, Sinaloa State"
                     /lat_lon="23.91 N 106.89 W"
                     /collection_date="2004"
WGS         JYJP01000001-JYJP01000147
WGS_SCAFLD  NZ_JYJP01000001-NZ_JYJP01000147
//
LOCUS       NZ_LBHE01000000      5193870 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Vibrio parahaemolyticus strain MAVP-36, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LBHE00000000
VERSION     NZ_LBHE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN03107385
            Assembly: GCF_001023105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio parahaemolyticus
  ORGANISM  Vibrio parahaemolyticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 5193870)
  AUTHORS   Whistler,C.A., Hall,J.A., Xu,F., Ilyas,S., Siwakoti,P., Cooper,V.S.
            and Jones,S.H.
  TITLE     Use of Whole-Genome Phylogeny and Comparisons for Development of a
            Multiplex PCR Assay To Identify Sequence Type 36 Vibrio
            parahaemolyticus
  JOURNAL   J Clin Microbiol 53 (6), 1864-1872 (2015)
   PUBMED   25832299
REFERENCE   2  (bases 1 to 5193870)
  AUTHORS   Whistler,C.A., Hall,J.A., Xu,F., Ilyas,S., Siwakoti,P., Cooper,V.S.
            and Jones,S.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2015) MCBS, University of New Hampshire, 46
            College Rd, Rm. 222, Durham, NH 03824, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LBHE00000000.1.
            The Vibrio parahaemolyticus whole genome shotgun (WGS) project has
            the project accession NZ_LBHE00000000.  This version of the project
            (01) has the accession number NZ_LBHE01000000, and consists of
            sequences LBHE01000001-LBHE01000032.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: A5-miseq v. 20140531
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 238.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001023105.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:53:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,830
            CDSs (total)                      :: 4,691
            Genes (coding)                    :: 4,639
            CDSs (with protein)               :: 4,639
            Genes (RNA)                       :: 139
            rRNAs                             :: 8, 8, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 7, 1 (16S, 23S)
            tRNAs                             :: 117
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 29 of 52
            Pseudo Genes (incomplete)         :: 31 of 52
            Pseudo Genes (internal stop)      :: 17 of 52
            Pseudo Genes (multiple problems)  :: 18 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5193870
                     /organism="Vibrio parahaemolyticus"
                     /mol_type="genomic DNA"
                     /strain="MAVP-36"
                     /db_xref="taxon:670"
                     /collection_date="2013"
WGS         LBHE01000001-LBHE01000032
WGS_SCAFLD  NZ_LBHE01000001-NZ_LBHE01000032
//
LOCUS       NZ_ADSH01000000      4195425 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis H1958004, whole genome shotgun sequencing project.
ACCESSION   NZ_ADSH00000000
VERSION     NZ_ADSH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403081
            Assembly: GCF_000324945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis H1958004
  ORGANISM  Yersinia pestis H1958004
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4195425)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4195425)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADSH00000000.1.
            The Yersinia pestis H1958004 whole genome shotgun (WGS) project has
            the project accession NZ_ADSH00000000.  This version of the project
            (01) has the accession number NZ_ADSH01000000, and consists of
            sequences ADSH01000001-ADSH01001339.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 53X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000324945.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:27:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,236
            CDSs (total)                      :: 4,204
            Genes (coding)                    :: 3,799
            CDSs (with protein)               :: 3,799
            Genes (RNA)                       :: 32
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1, 2 (5S, 16S, 23S)
            tRNAs                             :: 21
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 405
            CDSs (without protein)            :: 405
            Pseudo Genes (ambiguous residues) :: 0 of 405
            Pseudo Genes (frameshifted)       :: 76 of 405
            Pseudo Genes (incomplete)         :: 341 of 405
            Pseudo Genes (internal stop)      :: 16 of 405
            Pseudo Genes (multiple problems)  :: 26 of 405
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4195425
                     /organism="Yersinia pestis H1958004"
                     /mol_type="genomic DNA"
                     /strain="H1958004"
                     /db_xref="taxon:755931"
WGS         ADSH01000001-ADSH01001339
WGS_SCAFLD  NZ_ADSH01000001-NZ_ADSH01001339
//
LOCUS       NZ_JBSWWO010000000   4280580 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Thalassospira sp. ABD4_177, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWWO000000000
VERSION     NZ_JBSWWO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861944
            Assembly: GCF_056160125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Thalassospira sp. ABD4_177
  ORGANISM  Thalassospira sp. ABD4_177
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodospirillales; Thalassospiraceae; Thalassospira.
REFERENCE   1  (bases 1 to 4280580)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWWO000000000.1.
            The Thalassospira sp. ABD4_177 whole genome shotgun (WGS) project
            has the project accession NZ_JBSWWO000000000.  This version of the
            project (01) has the accession number NZ_JBSWWO010000000, and
            consists of sequences JBSWWO010000001-JBSWWO010000014.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 797x
            Sequencing Technology  :: Illumina NovaSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056160125.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:26:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,939
            CDSs (total)                      :: 3,860
            Genes (coding)                    :: 3,845
            CDSs (with protein)               :: 3,845
            Genes (RNA)                       :: 79
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 15
            CDSs (without protein)            :: 15
            Pseudo Genes (ambiguous residues) :: 0 of 15
            Pseudo Genes (frameshifted)       :: 6 of 15
            Pseudo Genes (incomplete)         :: 7 of 15
            Pseudo Genes (internal stop)      :: 2 of 15
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4280580
                     /organism="Thalassospira sp. ABD4_177"
                     /mol_type="genomic DNA"
                     /strain="ABD4_177"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477743"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2022-12-19"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWWO010000001-JBSWWO010000014
WGS_SCAFLD  NZ_JBSWWO010000001-NZ_JBSWWO010000014
//
LOCUS       NZ_CANW01000000      6613003 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Vibrio nigripulchritudo FTn2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_CANW00000000
VERSION     NZ_CANW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA3146319
            Assembly: GCF_001050655.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio nigripulchritudo FTn2
  ORGANISM  Vibrio nigripulchritudo FTn2
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1
  AUTHORS   Goudenege,D., Labreuche,Y., Krin,E., Ansquer,D., Mangenot,S.,
            Calteau,A., Medigue,C., Mazel,D., Polz,M.F. and Le Roux,F.
  TITLE     Comparative genomics of pathogenic lineages of Vibrio
            nigripulchritudo identifies virulence-associated traits
  JOURNAL   ISME J 7 (10), 1985-1996 (2013)
   PUBMED   23739050
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CANW00000000.1.
            The Vibrio nigripulchritudo FTn2 whole genome shotgun (WGS) project
            has the project accession NZ_CANW00000000.  This version of the
            project (01) has the accession number NZ_CANW01000000, and consists
            of sequences CANW01000001-CANW01000168.
            Annotation results relative to BLAST similarities, COG
            assignations, enzymatic function prediction (PRIAM software),
            TMHMM, PsortB and SignalP predictions, and synteny conservation
            (Syntonizer software) are available in the MicroScope annotation
            platform
            http://www.genoscope.cns.fr/agc/microscope.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001050655.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:57:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,999
            CDSs (total)                      :: 5,982
            Genes (coding)                    :: 5,949
            CDSs (with protein)               :: 5,949
            Genes (RNA)                       :: 17
            rRNAs                             :: 1, 2 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 10
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 33
            CDSs (without protein)            :: 33
            Pseudo Genes (ambiguous residues) :: 0 of 33
            Pseudo Genes (frameshifted)       :: 12 of 33
            Pseudo Genes (incomplete)         :: 22 of 33
            Pseudo Genes (internal stop)      :: 7 of 33
            Pseudo Genes (multiple problems)  :: 6 of 33
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6613003
                     /organism="Vibrio nigripulchritudo FTn2"
                     /mol_type="genomic DNA"
                     /strain="FTn2"
                     /db_xref="taxon:1238441"
WGS         CANW01000001-CANW01000168
WGS_SCAFLD  NZ_CANW01000001-NZ_CANW01000168
//
LOCUS       NZ_CANV01000000      6445886 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Vibrio nigripulchritudo ENn2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_CANV00000000
VERSION     NZ_CANV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA3146274
            Assembly: GCF_001050635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio nigripulchritudo ENn2
  ORGANISM  Vibrio nigripulchritudo ENn2
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1
  AUTHORS   Goudenege,D., Labreuche,Y., Krin,E., Ansquer,D., Mangenot,S.,
            Calteau,A., Medigue,C., Mazel,D., Polz,M.F. and Le Roux,F.
  TITLE     Comparative genomics of pathogenic lineages of Vibrio
            nigripulchritudo identifies virulence-associated traits
  JOURNAL   ISME J 7 (10), 1985-1996 (2013)
   PUBMED   23739050
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CANV00000000.1.
            The Vibrio nigripulchritudo ENn2 whole genome shotgun (WGS) project
            has the project accession NZ_CANV00000000.  This version of the
            project (01) has the accession number NZ_CANV01000000, and consists
            of sequences CANV01000001-CANV01000117.
            Annotation results relative to BLAST similarities, COG
            assignations, enzymatic function prediction (PRIAM software),
            TMHMM, PsortB and SignalP predictions, and synteny conservation
            (Syntonizer software) are available in the MicroScope annotation
            platform
            http://www.genoscope.cns.fr/agc/microscope.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001050635.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:03:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,765
            CDSs (total)                      :: 5,747
            Genes (coding)                    :: 5,710
            CDSs (with protein)               :: 5,710
            Genes (RNA)                       :: 18
            rRNAs                             :: 2, 2 (16S, 23S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 10
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 15 of 37
            Pseudo Genes (incomplete)         :: 27 of 37
            Pseudo Genes (internal stop)      :: 8 of 37
            Pseudo Genes (multiple problems)  :: 10 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6445886
                     /organism="Vibrio nigripulchritudo ENn2"
                     /mol_type="genomic DNA"
                     /strain="ENn2"
                     /db_xref="taxon:1238432"
WGS         CANV01000001-CANV01000117
WGS_SCAFLD  NZ_CANV01000001-NZ_CANV01000117
//
LOCUS       NZ_ADQW01000000      4512744 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis CMCC43032, whole genome shotgun sequencing project.
ACCESSION   NZ_ADQW00000000
VERSION     NZ_ADQW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403045
            Assembly: GCF_000324205.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis CMCC43032
  ORGANISM  Yersinia pestis CMCC43032
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4512744)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4512744)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADQW00000000.1.
            The Yersinia pestis CMCC43032 whole genome shotgun (WGS) project
            has the project accession NZ_ADQW00000000.  This version of the
            project (01) has the accession number NZ_ADQW01000000, and consists
            of sequences ADQW01000001-ADQW01001049.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 82X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000324205.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:31:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,432
            CDSs (total)                      :: 4,404
            Genes (coding)                    :: 4,053
            CDSs (with protein)               :: 4,053
            Genes (RNA)                       :: 28
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 19
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 351
            CDSs (without protein)            :: 351
            Pseudo Genes (ambiguous residues) :: 0 of 351
            Pseudo Genes (frameshifted)       :: 86 of 351
            Pseudo Genes (incomplete)         :: 275 of 351
            Pseudo Genes (internal stop)      :: 19 of 351
            Pseudo Genes (multiple problems)  :: 27 of 351
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4512744
                     /organism="Yersinia pestis CMCC43032"
                     /mol_type="genomic DNA"
                     /strain="CMCC43032"
                     /db_xref="taxon:755926"
WGS         ADQW01000001-ADQW01001049
WGS_SCAFLD  NZ_ADQW01000001-NZ_ADQW01001049
//
LOCUS       NZ_CAOD01000000      6472478 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Vibrio nigripulchritudo SFn135, whole genome shotgun sequencing
            project.
ACCESSION   NZ_CAOD00000000
VERSION     NZ_CAOD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA3146261
            Assembly: GCF_001050715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio nigripulchritudo SFn135
  ORGANISM  Vibrio nigripulchritudo SFn135
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1
  AUTHORS   Goudenege,D., Labreuche,Y., Krin,E., Ansquer,D., Mangenot,S.,
            Calteau,A., Medigue,C., Mazel,D., Polz,M.F. and Le Roux,F.
  TITLE     Comparative genomics of pathogenic lineages of Vibrio
            nigripulchritudo identifies virulence-associated traits
  JOURNAL   ISME J 7 (10), 1985-1996 (2013)
   PUBMED   23739050
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAOD00000000.1.
            The Vibrio nigripulchritudo SFn135 whole genome shotgun (WGS)
            project has the project accession NZ_CAOD00000000.  This version of
            the project (01) has the accession number NZ_CAOD01000000, and
            consists of sequences CAOD01000001-CAOD01000125.
            Annotation results relative to BLAST similarities, COG
            assignations, enzymatic function prediction (PRIAM software),
            TMHMM, PsortB and SignalP predictions, and synteny conservation
            (Syntonizer software) are available in the MicroScope annotation
            platform
            http://www.genoscope.cns.fr/agc/microscope.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001050715.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:04:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,796
            CDSs (total)                      :: 5,780
            Genes (coding)                    :: 5,739
            CDSs (with protein)               :: 5,739
            Genes (RNA)                       :: 16
            rRNAs                             :: 2, 2 (16S, 23S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 41
            CDSs (without protein)            :: 41
            Pseudo Genes (ambiguous residues) :: 0 of 41
            Pseudo Genes (frameshifted)       :: 18 of 41
            Pseudo Genes (incomplete)         :: 27 of 41
            Pseudo Genes (internal stop)      :: 10 of 41
            Pseudo Genes (multiple problems)  :: 11 of 41
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6472478
                     /organism="Vibrio nigripulchritudo SFn135"
                     /mol_type="genomic DNA"
                     /strain="SFn135"
                     /db_xref="taxon:1238448"
WGS         CAOD01000001-CAOD01000125
WGS_SCAFLD  NZ_CAOD01000001-NZ_CAOD01000125
//
LOCUS       NZ_JPRD01000000      6345364 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Vibrio owensii CAIM 1854 = LMG 25443 strain DY05, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JPRD00000000
VERSION     NZ_JPRD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02946409
            Assembly: GCF_000817815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio owensii CAIM 1854 = LMG 25443
  ORGANISM  Vibrio owensii CAIM 1854 = LMG 25443
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 6345364)
  AUTHORS   Espinoza-Valles,I., Vora,G., Leekitcharoenphon,P., Ussery,D.,
            Hoj,L. and Gomez-Gil,B.
  TITLE     Unique and conserved regions in Vibrio harveyi and related species
            in comparison with the shrimp pathogen Vibrio harveyi CAIM 1792
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6345364)
  AUTHORS   Hoj,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JUL-2014) Marine Microbiology and Symbiosis,
            Australian Institute of Marine Science, Townsville MC, Townsville,
            Queensland 4810, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JPRD00000000.1.
            The Vibrio owensii CAIM 1854 = LMG 25443 whole genome shotgun (WGS)
            project has the project accession NZ_JPRD00000000.  This version of
            the project (01) has the accession number NZ_JPRD01000000, and
            consists of sequences JPRD01000001-JPRD01000119.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 28-JUL-2014
            Assembly Method        :: CLC Genomics Workbench v. 6.5.1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 77.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000817815.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:46:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,967
            CDSs (total)                      :: 5,868
            Genes (coding)                    :: 5,724
            CDSs (with protein)               :: 5,724
            Genes (RNA)                       :: 99
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 93
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 144
            CDSs (without protein)            :: 144
            Pseudo Genes (ambiguous residues) :: 0 of 144
            Pseudo Genes (frameshifted)       :: 70 of 144
            Pseudo Genes (incomplete)         :: 81 of 144
            Pseudo Genes (internal stop)      :: 34 of 144
            Pseudo Genes (multiple problems)  :: 34 of 144
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6345364
                     /organism="Vibrio owensii CAIM 1854 = LMG 25443"
                     /mol_type="genomic DNA"
                     /strain="DY05"
                     /isolation_source="diseased larvae"
                     /host="Panulirus ornatus"
                     /type_material="type strain of Vibrio owensii"
                     /db_xref="taxon:1229493"
                     /geo_loc_name="Australia: AIMS Townsville"
                     /collection_date="2007-12-10"
                     /collected_by="Evan Goulden"
WGS         JPRD01000001-JPRD01000119
WGS_SCAFLD  NZ_JPRD01000001-NZ_JPRD01000119
//
LOCUS       NZ_JBSWYV010000000   4448454 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Thalassospira sp. ABL2_045, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWYV000000000
VERSION     NZ_JBSWYV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN51861884
            Assembly: GCF_056161285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Thalassospira sp. ABL2_045
  ORGANISM  Thalassospira sp. ABL2_045
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodospirillales; Thalassospiraceae; Thalassospira.
REFERENCE   1  (bases 1 to 4448454)
  AUTHORS   Chaulagain,D., John,J., Campbell,B.J. and Karig,D.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-NOV-2025) Bioengineering, Clemson University, 118
            Engineering Service Dr, Clemson, SC 29634, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWYV000000000.1.
            The Thalassospira sp. ABL2_045 whole genome shotgun (WGS) project
            has the project accession NZ_JBSWYV000000000.  This version of the
            project (01) has the accession number NZ_JBSWYV010000000, and
            consists of sequences JBSWYV010000001-JBSWYV010000043.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: shovill v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 242x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056161285.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:55:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,133
            CDSs (total)                      :: 4,061
            Genes (coding)                    :: 4,049
            CDSs (with protein)               :: 4,049
            Genes (RNA)                       :: 72
            rRNAs                             :: 3, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 2 (5S, 16S)
            tRNAs                             :: 61
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 2 of 12
            Pseudo Genes (incomplete)         :: 10 of 12
            Pseudo Genes (internal stop)      :: 0 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4448454
                     /organism="Thalassospira sp. ABL2_045"
                     /mol_type="genomic DNA"
                     /strain="ABL2_045"
                     /isolation_source="Marine"
                     /db_xref="taxon:3477780"
                     /geo_loc_name="USA: Atlantic ocean at Key West, Florida"
                     /collection_date="2023-07-26"
                     /collected_by="Naval Research Laboratory, Trumbo Point
                     Annex, Fleming Key, Bldg F-14, Key West, FL, USA. 33040"
WGS         JBSWYV010000001-JBSWYV010000043
WGS_SCAFLD  NZ_JBSWYV010000001-NZ_JBSWYV010000043
//
LOCUS       NZ_ADSC01000000      4521000 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis F1954001, whole genome shotgun sequencing project.
ACCESSION   NZ_ADSC00000000
VERSION     NZ_ADSC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403076
            Assembly: GCF_000324845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis F1954001
  ORGANISM  Yersinia pestis F1954001
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4521000)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4521000)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADSC00000000.1.
            The Yersinia pestis F1954001 whole genome shotgun (WGS) project has
            the project accession NZ_ADSC00000000.  This version of the project
            (01) has the accession number NZ_ADSC01000000, and consists of
            sequences ADSC01000001-ADSC01001058.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 71X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000324845.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:33:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,460
            CDSs (total)                      :: 4,434
            Genes (coding)                    :: 4,094
            CDSs (with protein)               :: 4,094
            Genes (RNA)                       :: 26
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 17
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 340
            CDSs (without protein)            :: 340
            Pseudo Genes (ambiguous residues) :: 0 of 340
            Pseudo Genes (frameshifted)       :: 82 of 340
            Pseudo Genes (incomplete)         :: 269 of 340
            Pseudo Genes (internal stop)      :: 17 of 340
            Pseudo Genes (multiple problems)  :: 24 of 340
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4521000
                     /organism="Yersinia pestis F1954001"
                     /mol_type="genomic DNA"
                     /strain="F1954001"
                     /db_xref="taxon:755890"
WGS         ADSC01000001-ADSC01001058
WGS_SCAFLD  NZ_ADSC01000001-NZ_ADSC01001058
//
LOCUS       NZ_QKWT01000000      3918371 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Vibrio cholerae strain 60555434, whole genome shotgun sequencing
            project.
ACCESSION   NZ_QKWT00000000
VERSION     NZ_QKWT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09404502
            Assembly: GCF_003260135.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 3918371)
  AUTHORS   Perez Chaparro,P.J., McCulloch,J.A., Cerdeira,L.T., Al-Dilaimi,A.,
            Canto de Sa,L.L., de Oliveira,R., Tauch,A., de Carvalho
            Azevedo,V.A., Cruz Schneider,M.P. and da Silva,A.L.
  TITLE     Whole genome sequencing of environmental Vibrio cholerae O1 from 10
            nanograms of DNA using short reads
  JOURNAL   J Microbiol Methods 87 (2), 208-212 (2011)
   PUBMED   21871929
REFERENCE   2  (bases 1 to 3918371)
  AUTHORS   Leong,L.E.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUN-2018) Infection and Immunity, SAHMRI, North
            Terrace, Adelaide, South Australia 5000, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QKWT00000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_QKWT00000000.  This version of the project
            (01) has the accession number NZ_QKWT01000000, and consists of
            sequences QKWT01000001-QKWT01000094.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. 1.1.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35.0x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003260135.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:03:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,556
            CDSs (total)                      :: 3,486
            Genes (coding)                    :: 3,426
            CDSs (with protein)               :: 3,426
            Genes (RNA)                       :: 70
            rRNAs                             :: 4, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 23S)
            partial rRNAs                     :: 3 (16S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 60
            CDSs (without protein)            :: 60
            Pseudo Genes (ambiguous residues) :: 0 of 60
            Pseudo Genes (frameshifted)       :: 14 of 60
            Pseudo Genes (incomplete)         :: 38 of 60
            Pseudo Genes (internal stop)      :: 12 of 60
            Pseudo Genes (multiple problems)  :: 4 of 60
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3918371
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /strain="60555434"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:666"
                     /geo_loc_name="Australia: Adelaide"
                     /lat_lon="34.9285 S 138.6007 E"
                     /collection_date="2017-07"
                     /collected_by="SA Pathology"
WGS         QKWT01000001-QKWT01000094
WGS_SCAFLD  NZ_QKWT01000001-NZ_QKWT01000094
//
LOCUS       NZ_JBBEVA010000000    840553 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Ureaplasma urealyticum strain UUR620, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBBEVA000000000
VERSION     NZ_JBBEVA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40374467
            Assembly: GCF_037405175.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ureaplasma urealyticum
  ORGANISM  Ureaplasma urealyticum
            Bacteria; Bacillati; Mycoplasmatota; Mycoplasmoidales;
            Mycoplasmoidaceae; Ureaplasma.
REFERENCE   1  (bases 1 to 840553)
  AUTHORS   Liu,W.
  TITLE     Draft genome sequence of Ureaplasma species
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 840553)
  AUTHORS   Liu,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2024) Sir Run Run Shaw Hospital, Zhejiang
            University School of Medicine, No. 3, Qingchun East Road, Hangzhou
            310016, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBEVA000000000.1.
            The Ureaplasma urealyticum whole genome shotgun (WGS) project has
            the project accession NZ_JBBEVA000000000.  This version of the
            project (01) has the accession number NZ_JBBEVA010000000, and
            consists of sequences JBBEVA010000001-JBBEVA010000009.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v.3.12
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037405175.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:27:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 676
            CDSs (total)                      :: 637
            Genes (coding)                    :: 625
            CDSs (with protein)               :: 625
            Genes (RNA)                       :: 39
            rRNAs                             :: 3, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 30
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 5 of 12
            Pseudo Genes (incomplete)         :: 5 of 12
            Pseudo Genes (internal stop)      :: 3 of 12
            Pseudo Genes (multiple problems)  :: 1 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..840553
                     /organism="Ureaplasma urealyticum"
                     /mol_type="genomic DNA"
                     /strain="UUR620"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:2130"
                     /geo_loc_name="China: Hangzhou"
                     /collection_date="2023-06-15"
WGS         JBBEVA010000001-JBBEVA010000009
WGS_SCAFLD  NZ_JBBEVA010000001-NZ_JBBEVA010000009
//
LOCUS       NZ_JBBEVC010000000    829060 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Ureaplasma urealyticum strain UUR555, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBBEVC000000000
VERSION     NZ_JBBEVC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40374492
            Assembly: GCF_037406215.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ureaplasma urealyticum
  ORGANISM  Ureaplasma urealyticum
            Bacteria; Bacillati; Mycoplasmatota; Mycoplasmoidales;
            Mycoplasmoidaceae; Ureaplasma.
REFERENCE   1  (bases 1 to 829060)
  AUTHORS   Liu,W.
  TITLE     Draft genome sequence of Ureaplasma species
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 829060)
  AUTHORS   Liu,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2024) Sir Run Run Shaw Hospital, Zhejiang
            University School of Medicine, No. 3, Qingchun East Road, Hangzhou
            310016, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBEVC000000000.1.
            The Ureaplasma urealyticum whole genome shotgun (WGS) project has
            the project accession NZ_JBBEVC000000000.  This version of the
            project (01) has the accession number NZ_JBBEVC010000000, and
            consists of sequences JBBEVC010000001-JBBEVC010000011.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v.3.12
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037406215.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:33:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 688
            CDSs (total)                      :: 648
            Genes (coding)                    :: 631
            CDSs (with protein)               :: 631
            Genes (RNA)                       :: 40
            rRNAs                             :: 3, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2 (5S, 16S)
            tRNAs                             :: 30
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 17
            CDSs (without protein)            :: 17
            Pseudo Genes (ambiguous residues) :: 0 of 17
            Pseudo Genes (frameshifted)       :: 6 of 17
            Pseudo Genes (incomplete)         :: 11 of 17
            Pseudo Genes (internal stop)      :: 2 of 17
            Pseudo Genes (multiple problems)  :: 1 of 17
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..829060
                     /organism="Ureaplasma urealyticum"
                     /mol_type="genomic DNA"
                     /strain="UUR555"
                     /isolation_source="swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:2130"
                     /geo_loc_name="China: Hangzhou"
                     /collection_date="2023-06-14"
WGS         JBBEVC010000001-JBBEVC010000011
WGS_SCAFLD  NZ_JBBEVC010000001-NZ_JBBEVC010000011
//
LOCUS       NZ_AMBR01000000      3912714 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Vibrio cholerae VC35, whole genome shotgun sequencing project.
ACCESSION   NZ_AMBR00000000
VERSION     NZ_AMBR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02469953
            Assembly: GCF_000299495.2
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae VC35
  ORGANISM  Vibrio cholerae VC35
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 3912714)
  AUTHORS   Osama,A., Gan,H.M., Teh,C.S., Yap,K.P. and Thong,K.L.
  TITLE     Genome sequence and comparative genomics analysis of a Vibrio
            cholerae O1 strain isolated from a cholera patient in Malaysia
  JOURNAL   J Bacteriol 194 (24), 6933 (2012)
   PUBMED   23209200
REFERENCE   2  (bases 1 to 3912714)
  AUTHORS   Abdulrazak,O., Gan,H.M., Teh,C.S.J., Yap,K.P. and Thong,K.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-AUG-2012) Faculty of Science, Institute of Biological
            Sciences, University of Malaya, Jalan Universiti, Kuala Lumpur, W.
            Persekutuan 50603, Malaysia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AMBR00000000.1.
            
            On Nov 10, 2015 this sequence version replaced gi:452732230.
            The Vibrio cholerae VC35 whole genome shotgun (WGS) project has the
            project accession NZ_AMBR00000000.  This version of the project
            (01) has the accession number NZ_AMBR01000000, and consists of
            sequences AMBR01000051-AMBR01000104.
            Bacteria and source DNA available from Dr. Thong Kwai Lin,
            Institute of Biological Sciences, University of Malaya, Malaysia.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: CLC Genomics Workbench v. 5.1
            Assembly Name         :: VC35.1
            Genome Coverage       :: 354.0x
            Sequencing Technology :: llumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000299495.2-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:56:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,519
            CDSs (total)                      :: 3,461
            Genes (coding)                    :: 3,415
            CDSs (with protein)               :: 3,415
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 25 of 46
            Pseudo Genes (incomplete)         :: 20 of 46
            Pseudo Genes (internal stop)      :: 13 of 46
            Pseudo Genes (multiple problems)  :: 9 of 46
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3912714
                     /organism="Vibrio cholerae VC35"
                     /mol_type="genomic DNA"
                     /strain="VC35"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:1225781"
                     /geo_loc_name="Malaysia"
                     /collection_date="2004"
WGS         AMBR01000001-AMBR01000049
WGS         AMBR01000051-AMBR01000104
WGS_SCAFLD  NZ_AMBR01000001-NZ_AMBR01000049
WGS_SCAFLD  NZ_AMBR01000051-NZ_AMBR01000104
//
LOCUS       NZ_JBBEUY010000000    759116 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Ureaplasma parvum strain UPA568, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBBEUY000000000
VERSION     NZ_JBBEUY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40374379
            Assembly: GCF_037407185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ureaplasma parvum
  ORGANISM  Ureaplasma parvum
            Bacteria; Bacillati; Mycoplasmatota; Mycoplasmoidales;
            Mycoplasmoidaceae; Ureaplasma.
REFERENCE   1  (bases 1 to 759116)
  AUTHORS   Liu,W.
  TITLE     Draft genome sequence of Ureaplasma species
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 759116)
  AUTHORS   Liu,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2024) Sir Run Run Shaw Hospital, Zhejiang
            University School of Medicine, No. 3, Qingchun East Road, Hangzhou
            310016, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBEUY000000000.1.
            The Ureaplasma parvum whole genome shotgun (WGS) project has the
            project accession NZ_JBBEUY000000000.  This version of the project
            (01) has the accession number NZ_JBBEUY010000000, and consists of
            sequences JBBEUY010000001-JBBEUY010000013.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v.3.12
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037407185.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:34:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 664
            CDSs (total)                      :: 626
            Genes (coding)                    :: 615
            CDSs (with protein)               :: 615
            Genes (RNA)                       :: 38
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 30
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 4 of 11
            Pseudo Genes (incomplete)         :: 8 of 11
            Pseudo Genes (internal stop)      :: 1 of 11
            Pseudo Genes (multiple problems)  :: 2 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..759116
                     /organism="Ureaplasma parvum"
                     /mol_type="genomic DNA"
                     /strain="UPA568"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:134821"
                     /geo_loc_name="China: Hangzhou"
                     /collection_date="2023-11-12"
WGS         JBBEUY010000001-JBBEUY010000013
WGS_SCAFLD  NZ_JBBEUY010000001-NZ_JBBEUY010000013
//
LOCUS       NZ_AQRC01000000      3928443 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Thioclava atlantica strain 13D2W-2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_AQRC00000000
VERSION     NZ_AQRC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02945012
            Assembly: GCF_000737065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Thioclava atlantica
  ORGANISM  Thioclava atlantica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Thioclava.
REFERENCE   1  (bases 1 to 3928443)
  AUTHORS   Liu,Y., Lai,Q., Du,J., Xu,H., Jiang,L. and Shao,Z.
  TITLE     Thioclava indica sp. nov., isolated from surface seawater of the
            Indian Ocean
  JOURNAL   Antonie Van Leeuwenhoek 107 (1), 297-304 (2015)
   PUBMED   25361528
REFERENCE   2  (bases 1 to 3928443)
  AUTHORS   Lai,Q., Li,G. and Shao,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-APR-2013) The Third Institute of Oceanography, State
            of Oceanic Administration (SOA), 184 Daxue Road, Xiamen, Fujian
            361005, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AQRC00000000.1.
            The Thioclava atlantica whole genome shotgun (WGS) project has the
            project accession NZ_AQRC00000000.  This version of the project
            (01) has the accession number NZ_AQRC01000000, and consists of
            sequences AQRC01000001-AQRC01000047.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            Bacteria available from Dr. Zongze Shao, The Third Institute of
            State Oceanic Administration (SOA), Daxue Road 184#, Xiamen,
            Fujian, 361005, China.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SOAPdenovo v. 1.05
            Genome Coverage       :: 195.0x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000737065.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:25:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,842
            CDSs (total)                      :: 3,789
            Genes (coding)                    :: 3,748
            CDSs (with protein)               :: 3,748
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 41
            CDSs (without protein)            :: 41
            Pseudo Genes (ambiguous residues) :: 0 of 41
            Pseudo Genes (frameshifted)       :: 15 of 41
            Pseudo Genes (incomplete)         :: 29 of 41
            Pseudo Genes (internal stop)      :: 7 of 41
            Pseudo Genes (multiple problems)  :: 8 of 41
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3928443
                     /organism="Thioclava atlantica"
                     /mol_type="genomic DNA"
                     /strain="13D2W-2"
                     /isolation_source="deep sea rock"
                     /type_material="type strain of Thioclava atlantica"
                     /db_xref="taxon:1317124"
                     /geo_loc_name="Atlantic Ocean"
                     /collection_date="2012-03-25"
WGS         AQRC01000001-AQRC01000047
WGS_SCAFLD  NZ_AQRC01000001-NZ_AQRC01000047
//
LOCUS       NZ_ADRI01000000      4358986 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis CMCC90027, whole genome shotgun sequencing project.
ACCESSION   NZ_ADRI00000000
VERSION     NZ_ADRI00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403057
            Assembly: GCF_000324445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis CMCC90027
  ORGANISM  Yersinia pestis CMCC90027
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4358986)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4358986)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADRI00000000.1.
            The Yersinia pestis CMCC90027 whole genome shotgun (WGS) project
            has the project accession NZ_ADRI00000000.  This version of the
            project (01) has the accession number NZ_ADRI01000000, and consists
            of sequences ADRI01000001-ADRI01001102.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 55X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000324445.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:38:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,321
            CDSs (total)                      :: 4,289
            Genes (coding)                    :: 3,929
            CDSs (with protein)               :: 3,929
            Genes (RNA)                       :: 32
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 20
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 360
            CDSs (without protein)            :: 360
            Pseudo Genes (ambiguous residues) :: 0 of 360
            Pseudo Genes (frameshifted)       :: 88 of 360
            Pseudo Genes (incomplete)         :: 285 of 360
            Pseudo Genes (internal stop)      :: 20 of 360
            Pseudo Genes (multiple problems)  :: 31 of 360
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4358986
                     /organism="Yersinia pestis CMCC90027"
                     /mol_type="genomic DNA"
                     /strain="CMCC90027"
                     /db_xref="taxon:755944"
WGS         ADRI01000001-ADRI01001102
WGS_SCAFLD  NZ_ADRI01000001-NZ_ADRI01001102
//
LOCUS       NZ_JRJE01000000      4270334 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Thalassospira australica strain NP 3b2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JRJE00000000
VERSION     NZ_JRJE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02947206
            Assembly: GCF_000763295.1
KEYWORDS    WGS; RefSeq.
SOURCE      Thalassospira australica
  ORGANISM  Thalassospira australica
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodospirillales; Thalassospiraceae; Thalassospira.
REFERENCE   1  (bases 1 to 4270334)
  AUTHORS   Lopez-Perez,M., Rodriguez-Valera,F., Webb,H.K., Crawford,R.J. and
            Ivanova,E.P.
  TITLE     Draft Genome Sequence of Thalassospira australica NP3b2T
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4270334)
  AUTHORS   Lopez-Perez,M., Rodriguez-Valera,F., Webb,H.K., Crawford,R.J. and
            Ivanova,E.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-SEP-2014) Division of Microbiology and Evolutionary
            Genomics Group, University Miguel Hernandez, Ctra.
            Alicante-Valencia N-332, San Juan de Alicante, Alicante 03550,
            Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JRJE00000000.1.
            The Thalassospira australica whole genome shotgun (WGS) project has
            the project accession NZ_JRJE00000000.  This version of the project
            (01) has the accession number NZ_JRJE01000000, and consists of
            sequences JRJE01000001-JRJE01000032.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. 0.7.63
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 25.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000763295.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:25:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,927
            CDSs (total)                      :: 3,863
            Genes (coding)                    :: 3,856
            CDSs (with protein)               :: 3,856
            Genes (RNA)                       :: 64
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 1 of 7
            Pseudo Genes (incomplete)         :: 6 of 7
            Pseudo Genes (internal stop)      :: 0 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4270334
                     /organism="Thalassospira australica"
                     /mol_type="genomic DNA"
                     /strain="NP 3b2"
                     /isolation_source="seawater"
                     /type_material="type strain of Thalassospira australica"
                     /db_xref="taxon:1528106"
                     /geo_loc_name="Australia"
                     /collection_date="2013-01-01"
WGS         JRJE01000001-JRJE01000032
WGS_SCAFLD  NZ_JRJE01000001-NZ_JRJE01000032
//
LOCUS       NZ_JNIM01000000      5607959 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Thermogemmatispora carboxidivorans strain PM5, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JNIM00000000
VERSION     NZ_JNIM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02841144
            Assembly: GCF_000702505.1
KEYWORDS    WGS; IMPROVED_HIGH_QUALITY_DRAFT; RefSeq.
SOURCE      Thermogemmatispora carboxidivorans
  ORGANISM  Thermogemmatispora carboxidivorans
            Bacteria; Bacillati; Chloroflexota; Ktedonobacteria;
            Thermogemmatisporales; Thermogemmatisporaceae; Thermogemmatispora.
REFERENCE   1  (bases 1 to 5607959)
  AUTHORS   King,G., Huntemann,M., Han,J., Chen,A., Kyrpides,N., Mavromatis,K.,
            Markowitz,V., Palaniappan,K., Ivanova,N., Schaumberg,A., Pati,A.,
            Liolios,K., Nordberg,H.P., Cantor,M.N., Hua,S.X. and Woyke,T.
  CONSRTM   DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (13-APR-2014) DOE Joint Genome Institute, 2800 Mitchell
            Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JNIM00000000.1.
            The Thermogemmatispora carboxidivorans whole genome shotgun (WGS)
            project has the project accession NZ_JNIM00000000.  This version of
            the project (01) has the accession number NZ_JNIM01000000, and
            consists of sequence JNIM01000001.
            URL -- http://www.jgi.doe.gov
            JGI Project ID: 1016214
            Source DNA and Organism available from Gary   King
            (gkingme@gmail.com)
            Source DNA available from Gary   King (gkingme@gmail.com)
            Organism available from Gary   King (gkingme@gmail.com)
            Contacts: Gary   King (gkingme@gmail.com)
                      Tanja Woyke (microbe@cuba.jgi-psf.org)
            Whole genome sequencing and draft assembly at JGI-PGF
            Annotation by JGI-ORNL
            The JGI and collaborators endorse the principles for the
            distribution and use of large scale sequencing data adopted by the
            larger genome sequencing community and urge users of this data to
            follow them. It is our intention to publish the work of this
            project in a timely fashion and we welcome collaborative
            interaction on the project and analysis.
            (http://www.genome.gov/page.cfm?pageID=10506376)
            Full annotations are available from IMG.
            
            ##MIGS-Data-START##
            assembly            :: HGAP v. 2.0.1
            investigation_type  :: bacteria_archaea
            project_name        :: Thermogemmatispora sp. PM5
            sequencing_meth     :: WGS
            GOLD Stamp ID       :: Gi22682
            Gene Calling Method :: Prodigal 2.5
            ##MIGS-Data-END##
            
            ##Genome-Assembly-Data-START##
            Finishing Goal           :: Improved High-Quality Draft
            Current Finishing Status :: Improved High-Quality Draft
            Assembly Method          :: HGAP v. 2.0.1
            Genome Coverage          :: Unknown
            Sequencing Technology    :: Illumina HiSeq 2000; PacBio RS
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000702505.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:42:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,358
            CDSs (total)                      :: 4,300
            Genes (coding)                    :: 4,261
            CDSs (with protein)               :: 4,261
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 1 of 39
            Pseudo Genes (incomplete)         :: 39 of 39
            Pseudo Genes (internal stop)      :: 0 of 39
            Pseudo Genes (multiple problems)  :: 1 of 39
            CRISPR Arrays                     :: 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5607959
                     /organism="Thermogemmatispora carboxidivorans"
                     /mol_type="genomic DNA"
                     /strain="PM5"
                     /type_material="type strain of Thermogemmatispora
                     carboxidivorans"
                     /db_xref="taxon:1382306"
WGS         JNIM01000001
WGS_SCAFLD  NZ_JNIM01000001
//
LOCUS       NZ_ADRN01000000      4337306 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis CMCC95001, whole genome shotgun sequencing project.
ACCESSION   NZ_ADRN00000000
VERSION     NZ_ADRN00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403062
            Assembly: GCF_000324545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis CMCC95001
  ORGANISM  Yersinia pestis CMCC95001
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4337306)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4337306)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADRN00000000.1.
            The Yersinia pestis CMCC95001 whole genome shotgun (WGS) project
            has the project accession NZ_ADRN00000000.  This version of the
            project (01) has the accession number NZ_ADRN01000000, and consists
            of sequences ADRN01000001-ADRN01001361.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 52X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000324545.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:36:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,385
            CDSs (total)                      :: 4,352
            Genes (coding)                    :: 3,878
            CDSs (with protein)               :: 3,878
            Genes (RNA)                       :: 33
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1, 3 (5S, 23S)
            tRNAs                             :: 20
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 474
            CDSs (without protein)            :: 474
            Pseudo Genes (ambiguous residues) :: 0 of 474
            Pseudo Genes (frameshifted)       :: 82 of 474
            Pseudo Genes (incomplete)         :: 401 of 474
            Pseudo Genes (internal stop)      :: 16 of 474
            Pseudo Genes (multiple problems)  :: 23 of 474
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4337306
                     /organism="Yersinia pestis CMCC95001"
                     /mol_type="genomic DNA"
                     /strain="CMCC95001"
                     /db_xref="taxon:755949"
WGS         ADRN01000001-ADRN01001361
WGS_SCAFLD  NZ_ADRN01000001-NZ_ADRN01001361
//
LOCUS       NZ_JBBEUZ010000000    725160 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Ureaplasma parvum strain UPA937, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBBEUZ000000000
VERSION     NZ_JBBEUZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40374380
            Assembly: GCF_037405295.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ureaplasma parvum
  ORGANISM  Ureaplasma parvum
            Bacteria; Bacillati; Mycoplasmatota; Mycoplasmoidales;
            Mycoplasmoidaceae; Ureaplasma.
REFERENCE   1  (bases 1 to 725160)
  AUTHORS   Liu,W.
  TITLE     Draft genome sequence of Ureaplasma species
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 725160)
  AUTHORS   Liu,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2024) Sir Run Run Shaw Hospital, Zhejiang
            University School of Medicine, No. 3, Qingchun East Road, Hangzhou
            310016, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBEUZ000000000.1.
            The Ureaplasma parvum whole genome shotgun (WGS) project has the
            project accession NZ_JBBEUZ000000000.  This version of the project
            (01) has the accession number NZ_JBBEUZ010000000, and consists of
            sequences JBBEUZ010000001-JBBEUZ010000007.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v.3.12
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037405295.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:26:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 624
            CDSs (total)                      :: 587
            Genes (coding)                    :: 573
            CDSs (with protein)               :: 573
            Genes (RNA)                       :: 37
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 30
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 14
            CDSs (without protein)            :: 14
            Pseudo Genes (ambiguous residues) :: 0 of 14
            Pseudo Genes (frameshifted)       :: 7 of 14
            Pseudo Genes (incomplete)         :: 9 of 14
            Pseudo Genes (internal stop)      :: 3 of 14
            Pseudo Genes (multiple problems)  :: 3 of 14
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..725160
                     /organism="Ureaplasma parvum"
                     /mol_type="genomic DNA"
                     /strain="UPA937"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:134821"
                     /geo_loc_name="China: Hangzhou"
                     /collection_date="2023-11-17"
WGS         JBBEUZ010000001-JBBEUZ010000007
WGS_SCAFLD  NZ_JBBEUZ010000001-NZ_JBBEUZ010000007
//
LOCUS       NZ_JBBEUX010000000    736174 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Ureaplasma parvum strain UPA233, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBBEUX000000000
VERSION     NZ_JBBEUX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40374343
            Assembly: GCF_037406335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ureaplasma parvum
  ORGANISM  Ureaplasma parvum
            Bacteria; Bacillati; Mycoplasmatota; Mycoplasmoidales;
            Mycoplasmoidaceae; Ureaplasma.
REFERENCE   1  (bases 1 to 736174)
  AUTHORS   Liu,W.
  TITLE     Draft genome sequence of Ureaplasma species
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 736174)
  AUTHORS   Liu,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2024) Sir Run Run Shaw Hospital, Zhejiang
            University School of Medicine, No. 3, Qingchun East Road, Hangzhou
            310016, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBEUX000000000.1.
            The Ureaplasma parvum whole genome shotgun (WGS) project has the
            project accession NZ_JBBEUX000000000.  This version of the project
            (01) has the accession number NZ_JBBEUX010000000, and consists of
            sequences JBBEUX010000001-JBBEUX010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v.3.12
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037406335.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:37:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 623
            CDSs (total)                      :: 584
            Genes (coding)                    :: 575
            CDSs (with protein)               :: 575
            Genes (RNA)                       :: 39
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 30
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 5 of 9
            Pseudo Genes (incomplete)         :: 4 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..736174
                     /organism="Ureaplasma parvum"
                     /mol_type="genomic DNA"
                     /strain="UPA233"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:134821"
                     /geo_loc_name="China: Hangzhou"
                     /collection_date="2023-06-10"
WGS         JBBEUX010000001-JBBEUX010000004
WGS_SCAFLD  NZ_JBBEUX010000001-NZ_JBBEUX010000004
//
LOCUS       NZ_JBBEUW010000000    749268 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Ureaplasma parvum strain UPA6, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBBEUW000000000
VERSION     NZ_JBBEUW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40374300
            Assembly: GCF_037405195.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ureaplasma parvum
  ORGANISM  Ureaplasma parvum
            Bacteria; Bacillati; Mycoplasmatota; Mycoplasmoidales;
            Mycoplasmoidaceae; Ureaplasma.
REFERENCE   1  (bases 1 to 749268)
  AUTHORS   Liu,W.
  TITLE     Draft genome sequence of Ureaplasma species
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 749268)
  AUTHORS   Liu,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2024) Sir Run Run Shaw Hospital, Zhejiang
            University School of Medicine, No. 3, Qingchun East Road, Hangzhou
            310016, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBEUW000000000.1.
            The Ureaplasma parvum whole genome shotgun (WGS) project has the
            project accession NZ_JBBEUW000000000.  This version of the project
            (01) has the accession number NZ_JBBEUW010000000, and consists of
            sequences JBBEUW010000001-JBBEUW010000007.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v.3.12
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037405195.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:25:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 641
            CDSs (total)                      :: 602
            Genes (coding)                    :: 591
            CDSs (with protein)               :: 591
            Genes (RNA)                       :: 39
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 30
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 11
            CDSs (without protein)            :: 11
            Pseudo Genes (ambiguous residues) :: 0 of 11
            Pseudo Genes (frameshifted)       :: 6 of 11
            Pseudo Genes (incomplete)         :: 6 of 11
            Pseudo Genes (internal stop)      :: 0 of 11
            Pseudo Genes (multiple problems)  :: 1 of 11
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..749268
                     /organism="Ureaplasma parvum"
                     /mol_type="genomic DNA"
                     /strain="UPA6"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:134821"
                     /geo_loc_name="China: hangzhou"
                     /collection_date="2023-11-25"
WGS         JBBEUW010000001-JBBEUW010000007
WGS_SCAFLD  NZ_JBBEUW010000001-NZ_JBBEUW010000007
//
LOCUS       NZ_ADQX01000000      4534555 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis CMCC49003, whole genome shotgun sequencing project.
ACCESSION   NZ_ADQX00000000
VERSION     NZ_ADQX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403046
            Assembly: GCF_000324225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis CMCC49003
  ORGANISM  Yersinia pestis CMCC49003
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4534555)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4534555)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADQX00000000.1.
            The Yersinia pestis CMCC49003 whole genome shotgun (WGS) project
            has the project accession NZ_ADQX00000000.  This version of the
            project (01) has the accession number NZ_ADQX01000000, and consists
            of sequences ADQX01000001-ADQX01000795.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 71X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000324225.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:38:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,286
            CDSs (total)                      :: 4,254
            Genes (coding)                    :: 3,985
            CDSs (with protein)               :: 3,985
            Genes (RNA)                       :: 32
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 20
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 269
            CDSs (without protein)            :: 269
            Pseudo Genes (ambiguous residues) :: 0 of 269
            Pseudo Genes (frameshifted)       :: 80 of 269
            Pseudo Genes (incomplete)         :: 203 of 269
            Pseudo Genes (internal stop)      :: 15 of 269
            Pseudo Genes (multiple problems)  :: 27 of 269
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4534555
                     /organism="Yersinia pestis CMCC49003"
                     /mol_type="genomic DNA"
                     /strain="CMCC49003"
                     /db_xref="taxon:755929"
WGS         ADQX01000001-ADQX01000795
WGS_SCAFLD  NZ_ADQX01000001-NZ_ADQX01000795
//
LOCUS       NZ_ADPJ01000000      4512584 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis 42095, whole genome shotgun sequencing project.
ACCESSION   NZ_ADPJ00000000
VERSION     NZ_ADPJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403005
            Assembly: GCF_000323425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis 42095
  ORGANISM  Yersinia pestis 42095
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4512584)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4512584)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADPJ00000000.1.
            The Yersinia pestis 42095 whole genome shotgun (WGS) project has
            the project accession NZ_ADPJ00000000.  This version of the project
            (01) has the accession number NZ_ADPJ01000000, and consists of
            sequences ADPJ01000001-ADPJ01001119.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 49X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000323425.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:26:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,482
            CDSs (total)                      :: 4,450
            Genes (coding)                    :: 4,068
            CDSs (with protein)               :: 4,068
            Genes (RNA)                       :: 32
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 20
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 382
            CDSs (without protein)            :: 382
            Pseudo Genes (ambiguous residues) :: 0 of 382
            Pseudo Genes (frameshifted)       :: 93 of 382
            Pseudo Genes (incomplete)         :: 300 of 382
            Pseudo Genes (internal stop)      :: 19 of 382
            Pseudo Genes (multiple problems)  :: 27 of 382
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4512584
                     /organism="Yersinia pestis 42095"
                     /mol_type="genomic DNA"
                     /strain="42095"
                     /db_xref="taxon:755878"
WGS         ADPJ01000001-ADPJ01001119
WGS_SCAFLD  NZ_ADPJ01000001-NZ_ADPJ01001119
//
LOCUS       NZ_ADRB01000000      4340671 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis CMCC67001, whole genome shotgun sequencing project.
ACCESSION   NZ_ADRB00000000
VERSION     NZ_ADRB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403050
            Assembly: GCF_000324305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis CMCC67001
  ORGANISM  Yersinia pestis CMCC67001
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4340671)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4340671)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADRB00000000.1.
            The Yersinia pestis CMCC67001 whole genome shotgun (WGS) project
            has the project accession NZ_ADRB00000000.  This version of the
            project (01) has the accession number NZ_ADRB01000000, and consists
            of sequences ADRB01000001-ADRB01001099.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 69X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000324305.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:39:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,258
            CDSs (total)                      :: 4,228
            Genes (coding)                    :: 3,873
            CDSs (with protein)               :: 3,873
            Genes (RNA)                       :: 30
            rRNAs                             :: 2, 3 (16S, 23S)
            partial rRNAs                     :: 2, 3 (16S, 23S)
            tRNAs                             :: 20
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 355
            CDSs (without protein)            :: 355
            Pseudo Genes (ambiguous residues) :: 0 of 355
            Pseudo Genes (frameshifted)       :: 86 of 355
            Pseudo Genes (incomplete)         :: 283 of 355
            Pseudo Genes (internal stop)      :: 18 of 355
            Pseudo Genes (multiple problems)  :: 30 of 355
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4340671
                     /organism="Yersinia pestis CMCC67001"
                     /mol_type="genomic DNA"
                     /strain="CMCC67001"
                     /db_xref="taxon:755934"
WGS         ADRB01000001-ADRB01001099
WGS_SCAFLD  NZ_ADRB01000001-NZ_ADRB01001099
//
LOCUS       NZ_CDVFGE010000000   4376142 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Thalassospira tepidiphila isolate MarMAG_115766, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVFGE000000000
VERSION     NZ_CDVFGE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120738433
            Assembly: GCF_977668825.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Thalassospira tepidiphila (marine metagenome)
  ORGANISM  Thalassospira tepidiphila
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodospirillales; Thalassospiraceae; Thalassospira.
REFERENCE   1  (bases 1 to 4376142)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVFGE000000000.1.
            The Thalassospira tepidiphila whole genome shotgun (WGS) project
            has the project accession NZ_CDVFGE000000000.  This version of the
            project (01) has the accession number NZ_CDVFGE010000000, and
            consists of sequences CDVFGE010000001-CDVFGE010000005.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977668825.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:36:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,042
            CDSs (total)                      :: 3,984
            Genes (coding)                    :: 3,979
            CDSs (with protein)               :: 3,979
            Genes (RNA)                       :: 58
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4376142
                     /organism="Thalassospira tepidiphila"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_115766"
                     /isolation_source="surface seawater"
                     /db_xref="taxon:393657"
                     /environmental_sample
                     /geo_loc_name="Costa Rica"
                     /collection_date="2005-07-01"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVFGE010000001-CDVFGE010000005
WGS_SCAFLD  NZ_CDVFGE010000001-NZ_CDVFGE010000005
//
LOCUS       NZ_ADRW01000000      4410882 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis D1982001, whole genome shotgun sequencing project.
ACCESSION   NZ_ADRW00000000
VERSION     NZ_ADRW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403071
            Assembly: GCF_000324725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis D1982001
  ORGANISM  Yersinia pestis D1982001
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4410882)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4410882)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADRW00000000.1.
            The Yersinia pestis D1982001 whole genome shotgun (WGS) project has
            the project accession NZ_ADRW00000000.  This version of the project
            (01) has the accession number NZ_ADRW01000000, and consists of
            sequences ADRW01000001-ADRW01000896.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 53X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000324725.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:39:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,287
            CDSs (total)                      :: 4,261
            Genes (coding)                    :: 3,992
            CDSs (with protein)               :: 3,992
            Genes (RNA)                       :: 26
            tRNAs                             :: 19
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 269
            CDSs (without protein)            :: 269
            Pseudo Genes (ambiguous residues) :: 0 of 269
            Pseudo Genes (frameshifted)       :: 80 of 269
            Pseudo Genes (incomplete)         :: 203 of 269
            Pseudo Genes (internal stop)      :: 17 of 269
            Pseudo Genes (multiple problems)  :: 28 of 269
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4410882
                     /organism="Yersinia pestis D1982001"
                     /mol_type="genomic DNA"
                     /strain="D1982001"
                     /db_xref="taxon:755887"
WGS         ADRW01000001-ADRW01000896
WGS_SCAFLD  NZ_ADRW01000001-NZ_ADRW01000896
//
LOCUS       NZ_ADPO01000000      4493411 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis 71021, whole genome shotgun sequencing project.
ACCESSION   NZ_ADPO00000000
VERSION     NZ_ADPO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403010
            Assembly: GCF_000323525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis 71021
  ORGANISM  Yersinia pestis 71021
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4493411)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4493411)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADPO00000000.1.
            The Yersinia pestis 71021 whole genome shotgun (WGS) project has
            the project accession NZ_ADPO00000000.  This version of the project
            (01) has the accession number NZ_ADPO01000000, and consists of
            sequences ADPO01000001-ADPO01001489.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 49X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000323525.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:28:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,681
            CDSs (total)                      :: 4,649
            Genes (coding)                    :: 4,181
            CDSs (with protein)               :: 4,181
            Genes (RNA)                       :: 32
            rRNAs                             :: 2, 3 (16S, 23S)
            partial rRNAs                     :: 2, 3 (16S, 23S)
            tRNAs                             :: 20
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 468
            CDSs (without protein)            :: 468
            Pseudo Genes (ambiguous residues) :: 0 of 468
            Pseudo Genes (frameshifted)       :: 84 of 468
            Pseudo Genes (incomplete)         :: 399 of 468
            Pseudo Genes (internal stop)      :: 16 of 468
            Pseudo Genes (multiple problems)  :: 29 of 468
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4493411
                     /organism="Yersinia pestis 71021"
                     /mol_type="genomic DNA"
                     /strain="71021"
                     /db_xref="taxon:755884"
WGS         ADPO01000001-ADPO01001489
WGS_SCAFLD  NZ_ADPO01000001-NZ_ADPO01001489
//
LOCUS       NZ_JNGI01000000      4816531 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Trabulsiella odontotermitis strain 12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JNGI00000000
VERSION     NZ_JNGI00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02836822
            Assembly: GCF_001188495.2
KEYWORDS    WGS; RefSeq.
SOURCE      Trabulsiella odontotermitis
  ORGANISM  Trabulsiella odontotermitis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Trabulsiella.
REFERENCE   1  (bases 1 to 4816531)
  AUTHORS   Sapountzis,P., Gruntjes,T., Otani,S., Estevez,J., da Costa,R.R.,
            Plunkett,G. 3rd, Perna,N.T. and Poulsen,M.
  TITLE     The Enterobacterium Trabulsiella odontotermitis Presents Novel
            Adaptations Related to Its Association with Fungus-Growing Termites
  JOURNAL   Appl Environ Microbiol 81 (19), 6577-6588 (2015)
   PUBMED   26162887
REFERENCE   2  (bases 1 to 4816531)
  AUTHORS   Sapountzis,P., Gruntjes,T., Plunckett,G. III, Perna,N. and
            Poulsen,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-JUN-2014) Biology, University of Copenhagen,
            Universitetsparken 15, Copenhagen East 2100, Denmark
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JNGI00000000.1.
            
            On Dec 8, 2018 this sequence version replaced gi:908736012.
            The Trabulsiella odontotermitis whole genome shotgun (WGS) project
            has the project accession NZ_JNGI00000000.  This version of the
            project (01) has the accession number NZ_JNGI01000000, and consists
            of sequences JNGI01000121-JNGI01000191.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: JUN-2012
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 80.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001188495.2-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:12:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,704
            CDSs (total)                      :: 4,640
            Genes (coding)                    :: 4,552
            CDSs (with protein)               :: 4,552
            Genes (RNA)                       :: 64
            rRNAs                             :: 3, 3 (16S, 23S)
            partial rRNAs                     :: 3, 3 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 88
            CDSs (without protein)            :: 88
            Pseudo Genes (ambiguous residues) :: 0 of 88
            Pseudo Genes (frameshifted)       :: 31 of 88
            Pseudo Genes (incomplete)         :: 66 of 88
            Pseudo Genes (internal stop)      :: 15 of 88
            Pseudo Genes (multiple problems)  :: 21 of 88
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4816531
                     /organism="Trabulsiella odontotermitis"
                     /mol_type="genomic DNA"
                     /strain="12"
                     /isolation_source="abdomen"
                     /host="Macrotermes natalensis"
                     /db_xref="taxon:379893"
                     /geo_loc_name="South Africa"
                     /lat_lon="24.675139 S 28.797333 E"
                     /collection_date="2011-02"
WGS         JNGI01000001-JNGI01000119
WGS         JNGI01000121-JNGI01000191
WGS_SCAFLD  NZ_JNGI01000001-NZ_JNGI01000119
WGS_SCAFLD  NZ_JNGI01000121-NZ_JNGI01000191
//
LOCUS       NZ_ADRH01000000      4510364 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis CMCC87001, whole genome shotgun sequencing project.
ACCESSION   NZ_ADRH00000000
VERSION     NZ_ADRH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403056
            Assembly: GCF_000324425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis CMCC87001
  ORGANISM  Yersinia pestis CMCC87001
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4510364)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4510364)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADRH00000000.1.
            The Yersinia pestis CMCC87001 whole genome shotgun (WGS) project
            has the project accession NZ_ADRH00000000.  This version of the
            project (01) has the accession number NZ_ADRH01000000, and consists
            of sequences ADRH01000001-ADRH01000870.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 59X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000324425.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:43:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,297
            CDSs (total)                      :: 4,263
            Genes (coding)                    :: 3,979
            CDSs (with protein)               :: 3,979
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 22
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 284
            CDSs (without protein)            :: 284
            Pseudo Genes (ambiguous residues) :: 0 of 284
            Pseudo Genes (frameshifted)       :: 88 of 284
            Pseudo Genes (incomplete)         :: 207 of 284
            Pseudo Genes (internal stop)      :: 20 of 284
            Pseudo Genes (multiple problems)  :: 28 of 284
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4510364
                     /organism="Yersinia pestis CMCC87001"
                     /mol_type="genomic DNA"
                     /strain="CMCC87001"
                     /db_xref="taxon:755943"
WGS         ADRH01000001-ADRH01000870
WGS_SCAFLD  NZ_ADRH01000001-NZ_ADRH01000870
//
LOCUS       NZ_ADPF01000000      4433848 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis 351001, whole genome shotgun sequencing project.
ACCESSION   NZ_ADPF00000000
VERSION     NZ_ADPF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403001
            Assembly: GCF_000323345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis 351001
  ORGANISM  Yersinia pestis 351001
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4433848)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4433848)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADPF00000000.1.
            The Yersinia pestis 351001 whole genome shotgun (WGS) project has
            the project accession NZ_ADPF00000000.  This version of the project
            (01) has the accession number NZ_ADPF01000000, and consists of
            sequences ADPF01000001-ADPF01001332.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 45X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000323345.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:27:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,470
            CDSs (total)                      :: 4,436
            Genes (coding)                    :: 4,017
            CDSs (with protein)               :: 4,017
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1, 4 (5S, 23S)
            tRNAs                             :: 20
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 419
            CDSs (without protein)            :: 419
            Pseudo Genes (ambiguous residues) :: 0 of 419
            Pseudo Genes (frameshifted)       :: 84 of 419
            Pseudo Genes (incomplete)         :: 347 of 419
            Pseudo Genes (internal stop)      :: 18 of 419
            Pseudo Genes (multiple problems)  :: 27 of 419
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4433848
                     /organism="Yersinia pestis 351001"
                     /mol_type="genomic DNA"
                     /strain="351001"
                     /db_xref="taxon:755871"
WGS         ADPF01000001-ADPF01001332
WGS_SCAFLD  NZ_ADPF01000001-NZ_ADPF01001332
//
LOCUS       NZ_CDVMCE010000000   4388920 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Thalassospira tepidiphila isolate MarMAG_115767, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVMCE000000000
VERSION     NZ_CDVMCE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120738453
            Assembly: GCF_977715125.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Thalassospira tepidiphila (marine metagenome)
  ORGANISM  Thalassospira tepidiphila
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodospirillales; Thalassospiraceae; Thalassospira.
REFERENCE   1  (bases 1 to 4388920)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVMCE000000000.1.
            The Thalassospira tepidiphila whole genome shotgun (WGS) project
            has the project accession NZ_CDVMCE000000000.  This version of the
            project (01) has the accession number NZ_CDVMCE010000000, and
            consists of sequences CDVMCE010000001-CDVMCE010000006.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977715125.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:37:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,054
            CDSs (total)                      :: 3,997
            Genes (coding)                    :: 3,992
            CDSs (with protein)               :: 3,992
            Genes (RNA)                       :: 57
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4388920
                     /organism="Thalassospira tepidiphila"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_115767"
                     /isolation_source="surface seawater"
                     /db_xref="taxon:393657"
                     /environmental_sample
                     /geo_loc_name="Costa Rica"
                     /collection_date="2005-07-01"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVMCE010000001-CDVMCE010000006
WGS_SCAFLD  NZ_CDVMCE010000001-NZ_CDVMCE010000006
//
LOCUS       NZ_ADRD01000000      4417626 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis CMCC8211, whole genome shotgun sequencing project.
ACCESSION   NZ_ADRD00000000
VERSION     NZ_ADRD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403052
            Assembly: GCF_000324345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis CMCC8211
  ORGANISM  Yersinia pestis CMCC8211
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4417626)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4417626)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADRD00000000.1.
            The Yersinia pestis CMCC8211 whole genome shotgun (WGS) project has
            the project accession NZ_ADRD00000000.  This version of the project
            (01) has the accession number NZ_ADRD01000000, and consists of
            sequences ADRD01000001-ADRD01000797.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 62X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000324345.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:38:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,158
            CDSs (total)                      :: 4,127
            Genes (coding)                    :: 3,873
            CDSs (with protein)               :: 3,873
            Genes (RNA)                       :: 31
            rRNAs                             :: 1, 2 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 20
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 254
            CDSs (without protein)            :: 254
            Pseudo Genes (ambiguous residues) :: 0 of 254
            Pseudo Genes (frameshifted)       :: 83 of 254
            Pseudo Genes (incomplete)         :: 178 of 254
            Pseudo Genes (internal stop)      :: 19 of 254
            Pseudo Genes (multiple problems)  :: 24 of 254
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4417626
                     /organism="Yersinia pestis CMCC8211"
                     /mol_type="genomic DNA"
                     /strain="CMCC8211"
                     /db_xref="taxon:755938"
WGS         ADRD01000001-ADRD01000797
WGS_SCAFLD  NZ_ADRD01000001-NZ_ADRD01000797
//
LOCUS       NZ_BCMU01000000      2427900 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Tepidanaerobacter syntrophicus strain JL, whole genome shotgun
            sequencing project.
ACCESSION   NZ_BCMU00000000
VERSION     NZ_BCMU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMD00043586
            Assembly: GCF_001485475.2
KEYWORDS    WGS; RefSeq.
SOURCE      Tepidanaerobacter syntrophicus
  ORGANISM  Tepidanaerobacter syntrophicus
            Bacteria; Bacillati; Bacillota; Clostridia;
            Thermosediminibacterales; Tepidanaerobacteraceae;
            Tepidanaerobacter.
REFERENCE   1
  AUTHORS   Matsuura,N., Ohashi,A., Tourlousse,D.M. and Sekiguchi,Y.
  TITLE     Draft Genome Sequence of the Syntrophic Lactate-Degrading Bacterium
            Tepidanaerobacter syntrophicus JLT
  JOURNAL   Genome Announc 4 (1), e01712-15 (2016)
   PUBMED   26868399
  REMARK    DOI:10.1128/genomeA.01712-15
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2427900)
  AUTHORS   Ohashi,A. and Sekiguchi,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2015) Contact:Yuji Sekiguchi National Institute
            of Advanced Industrial Science and Technology (AIST), Biomedical
            Research Institute; 1-1-1 Higashi, Tsukuba, Ibaraki 305-0035, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            BCMU00000000.1.
            The Tepidanaerobacter syntrophicus whole genome shotgun (WGS)
            project has the project accession NZ_BCMU00000000.  This version of
            the project (01) has the accession number NZ_BCMU01000000, and
            consists of sequences BCMU01000001-BCMU01000010.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SPAdes v. 3.6
            Genome Coverage       :: 200x
            Sequencing Technology :: llumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001485475.2-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 12:32:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,367
            CDSs (total)                      :: 2,293
            Genes (coding)                    :: 2,273
            CDSs (with protein)               :: 2,273
            Genes (RNA)                       :: 74
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 5 of 20
            Pseudo Genes (incomplete)         :: 16 of 20
            Pseudo Genes (internal stop)      :: 2 of 20
            Pseudo Genes (multiple problems)  :: 3 of 20
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2427900
                     /organism="Tepidanaerobacter syntrophicus"
                     /mol_type="genomic DNA"
                     /strain="JL"
                     /isolation_source="anaerobic sludge"
                     /type_material="type strain of Tepidanaerobacter
                     syntrophicus"
                     /db_xref="taxon:224999"
                     /geo_loc_name="Japan"
                     /collection_date="2005"
WGS         BCMU01000001-BCMU01000010
WGS_SCAFLD  NZ_DF976995-NZ_DF977003
//
LOCUS       NZ_ADQN01000000      4518010 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis CMCC125002, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ADQN00000000
VERSION     NZ_ADQN00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403036
            Assembly: GCF_000324025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis CMCC125002
  ORGANISM  Yersinia pestis CMCC125002
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4518010)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4518010)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADQN00000000.1.
            The Yersinia pestis CMCC125002 whole genome shotgun (WGS) project
            has the project accession NZ_ADQN00000000.  This version of the
            project (01) has the accession number NZ_ADQN01000000, and consists
            of sequences ADQN01000001-ADQN01000790.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 83X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000324025.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:33:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,258
            CDSs (total)                      :: 4,228
            Genes (coding)                    :: 3,967
            CDSs (with protein)               :: 3,967
            Genes (RNA)                       :: 30
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 20
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 261
            CDSs (without protein)            :: 261
            Pseudo Genes (ambiguous residues) :: 0 of 261
            Pseudo Genes (frameshifted)       :: 87 of 261
            Pseudo Genes (incomplete)         :: 186 of 261
            Pseudo Genes (internal stop)      :: 18 of 261
            Pseudo Genes (multiple problems)  :: 28 of 261
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4518010
                     /organism="Yersinia pestis CMCC125002"
                     /mol_type="genomic DNA"
                     /strain="CMCC125002"
                     /db_xref="taxon:755913"
WGS         ADQN01000001-ADQN01000790
WGS_SCAFLD  NZ_ADQN01000001-NZ_ADQN01000790
//
LOCUS       NZ_CDVDNB010000000   4374252 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Thalassospira tepidiphila isolate MarMAG_115765, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVDNB000000000
VERSION     NZ_CDVDNB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120738425
            Assembly: GCF_977657085.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Thalassospira tepidiphila (marine metagenome)
  ORGANISM  Thalassospira tepidiphila
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodospirillales; Thalassospiraceae; Thalassospira.
REFERENCE   1  (bases 1 to 4374252)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVDNB000000000.1.
            The Thalassospira tepidiphila whole genome shotgun (WGS) project
            has the project accession NZ_CDVDNB000000000.  This version of the
            project (01) has the accession number NZ_CDVDNB010000000, and
            consists of sequences CDVDNB010000001-CDVDNB010000007.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977657085.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:36:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,043
            CDSs (total)                      :: 3,985
            Genes (coding)                    :: 3,980
            CDSs (with protein)               :: 3,980
            Genes (RNA)                       :: 58
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 0 of 5
            Pseudo Genes (incomplete)         :: 4 of 5
            Pseudo Genes (internal stop)      :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4374252
                     /organism="Thalassospira tepidiphila"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_115765"
                     /isolation_source="surface seawater"
                     /db_xref="taxon:393657"
                     /environmental_sample
                     /geo_loc_name="Costa Rica"
                     /collection_date="2005-07-01"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVDNB010000001-CDVDNB010000007
WGS_SCAFLD  NZ_CDVDNB010000001-NZ_CDVDNB010000007
//
LOCUS       NZ_ADPA01000000      4488493 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis 2506, whole genome shotgun sequencing project.
ACCESSION   NZ_ADPA00000000
VERSION     NZ_ADPA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02402996
            Assembly: GCF_000323225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis 2506
  ORGANISM  Yersinia pestis 2506
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4488493)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4488493)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADPA00000000.1.
            The Yersinia pestis 2506 whole genome shotgun (WGS) project has the
            project accession NZ_ADPA00000000.  This version of the project
            (01) has the accession number NZ_ADPA01000000, and consists of
            sequences ADPA01000001-ADPA01000820.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 73X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000323225.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:31:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,258
            CDSs (total)                      :: 4,226
            Genes (coding)                    :: 3,941
            CDSs (with protein)               :: 3,941
            Genes (RNA)                       :: 32
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 20
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 285
            CDSs (without protein)            :: 285
            Pseudo Genes (ambiguous residues) :: 0 of 285
            Pseudo Genes (frameshifted)       :: 83 of 285
            Pseudo Genes (incomplete)         :: 213 of 285
            Pseudo Genes (internal stop)      :: 20 of 285
            Pseudo Genes (multiple problems)  :: 28 of 285
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4488493
                     /organism="Yersinia pestis 2506"
                     /mol_type="genomic DNA"
                     /strain="2506"
                     /db_xref="taxon:755864"
WGS         ADPA01000001-ADPA01000820
WGS_SCAFLD  NZ_ADPA01000001-NZ_ADPA01000820
//
LOCUS       NZ_ADRS01000000      4305250 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis CMCCK110001, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ADRS00000000
VERSION     NZ_ADRS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403067
            Assembly: GCF_000324645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis CMCCK110001
  ORGANISM  Yersinia pestis CMCCK110001
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4305250)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4305250)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADRS00000000.1.
            The Yersinia pestis CMCCK110001 whole genome shotgun (WGS) project
            has the project accession NZ_ADRS00000000.  This version of the
            project (01) has the accession number NZ_ADRS01000000, and consists
            of sequences ADRS01000001-ADRS01001385.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 46X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000324645.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:40:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,375
            CDSs (total)                      :: 4,343
            Genes (coding)                    :: 3,868
            CDSs (with protein)               :: 3,868
            Genes (RNA)                       :: 32
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 22
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 475
            CDSs (without protein)            :: 475
            Pseudo Genes (ambiguous residues) :: 0 of 475
            Pseudo Genes (frameshifted)       :: 84 of 475
            Pseudo Genes (incomplete)         :: 399 of 475
            Pseudo Genes (internal stop)      :: 20 of 475
            Pseudo Genes (multiple problems)  :: 26 of 475
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4305250
                     /organism="Yersinia pestis CMCCK110001"
                     /mol_type="genomic DNA"
                     /strain="CMCCK110001"
                     /db_xref="taxon:755955"
WGS         ADRS01000001-ADRS01001385
WGS_SCAFLD  NZ_ADRS01000001-NZ_ADRS01001385
//
LOCUS       NZ_JARBWE010000000   2421410 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus suis strain 2022WUSS025, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JARBWE000000000
VERSION     NZ_JARBWE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN31099740
            Assembly: GCF_056155085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2421410)
  AUTHORS   Zheng,H.
  TITLE     Streptococcus suis strain
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2421410)
  AUTHORS   Zheng,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-FEB-2023) State Key Laboratory of Infectious Disease
            Prevention and Control, National Institute for Communicable Disease
            Control and Prevention, 155 Changbai Road, Changping District,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARBWE000000000.1.
            The Streptococcus suis whole genome shotgun (WGS) project has the
            project accession NZ_JARBWE000000000.  This version of the project
            (01) has the accession number NZ_JARBWE010000000, and consists of
            sequences JARBWE010000001-JARBWE010000103.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200.0x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056155085.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 01:46:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,436
            CDSs (total)                      :: 2,373
            Genes (coding)                    :: 2,270
            CDSs (with protein)               :: 2,270
            Genes (RNA)                       :: 63
            rRNAs                             :: 1, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 1 (16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 103
            CDSs (without protein)            :: 103
            Pseudo Genes (ambiguous residues) :: 0 of 103
            Pseudo Genes (frameshifted)       :: 19 of 103
            Pseudo Genes (incomplete)         :: 77 of 103
            Pseudo Genes (internal stop)      :: 16 of 103
            Pseudo Genes (multiple problems)  :: 9 of 103
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2421410
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /strain="2022WUSS025"
                     /isolation_source="pig farm"
                     /host="pig"
                     /db_xref="taxon:1307"
                     /geo_loc_name="China: Guangxi"
                     /lat_lon="22.8198027 N 108.3352404 E"
                     /collection_date="2021-12-14"
                     /collected_by="College of Veterinary Medicine, Nanjing
                     Agricultural University, Nanjing, China"
WGS         JARBWE010000001-JARBWE010000103
WGS_SCAFLD  NZ_JARBWE010000001-NZ_JARBWE010000103
//
LOCUS       NZ_ADPK01000000      4478071 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis 5, whole genome shotgun sequencing project.
ACCESSION   NZ_ADPK00000000
VERSION     NZ_ADPK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403006
            Assembly: GCF_000323445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis 5
  ORGANISM  Yersinia pestis 5
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4478071)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4478071)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADPK00000000.1.
            The Yersinia pestis 5 whole genome shotgun (WGS) project has the
            project accession NZ_ADPK00000000.  This version of the project
            (01) has the accession number NZ_ADPK01000000, and consists of
            sequences ADPK01000001-ADPK01001008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 82X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000323445.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:34:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,387
            CDSs (total)                      :: 4,355
            Genes (coding)                    :: 4,022
            CDSs (with protein)               :: 4,022
            Genes (RNA)                       :: 32
            rRNAs                             :: 1, 4 (16S, 23S)
            partial rRNAs                     :: 1, 4 (16S, 23S)
            tRNAs                             :: 20
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 333
            CDSs (without protein)            :: 333
            Pseudo Genes (ambiguous residues) :: 0 of 333
            Pseudo Genes (frameshifted)       :: 84 of 333
            Pseudo Genes (incomplete)         :: 264 of 333
            Pseudo Genes (internal stop)      :: 17 of 333
            Pseudo Genes (multiple problems)  :: 30 of 333
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4478071
                     /organism="Yersinia pestis 5"
                     /mol_type="genomic DNA"
                     /strain="5"
                     /db_xref="taxon:755880"
WGS         ADPK01000001-ADPK01001008
WGS_SCAFLD  NZ_ADPK01000001-NZ_ADPK01001008
//
LOCUS       NZ_JBJCYN010000000   1859756 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain XCB027-2014-M1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCYN000000000
VERSION     NZ_JBJCYN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617878
            Assembly: GCF_056157665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1859756)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCYN000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCYN000000000.  This version of the
            project (01) has the accession number NZ_JBJCYN010000000, and
            consists of sequences JBJCYN010000001-JBJCYN010000024.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157665.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:40:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,862
            CDSs (total)                      :: 1,819
            Genes (coding)                    :: 1,756
            CDSs (with protein)               :: 1,756
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 36
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 31 of 63
            Pseudo Genes (incomplete)         :: 38 of 63
            Pseudo Genes (internal stop)      :: 16 of 63
            Pseudo Genes (multiple problems)  :: 16 of 63
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1859756
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="XCB027-2014-M1"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCYN010000001-JBJCYN010000024
WGS_SCAFLD  NZ_JBJCYN010000001-NZ_JBJCYN010000024
//
LOCUS       NZ_JBJCYJ010000000   1864736 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain XCN1005-2014-M1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCYJ000000000
VERSION     NZ_JBJCYJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617882
            Assembly: GCF_056157585.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1864736)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCYJ000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCYJ000000000.  This version of the
            project (01) has the accession number NZ_JBJCYJ010000000, and
            consists of sequences JBJCYJ010000001-JBJCYJ010000025.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157585.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:40:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,875
            CDSs (total)                      :: 1,825
            Genes (coding)                    :: 1,759
            CDSs (with protein)               :: 1,759
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 66
            CDSs (without protein)            :: 66
            Pseudo Genes (ambiguous residues) :: 0 of 66
            Pseudo Genes (frameshifted)       :: 31 of 66
            Pseudo Genes (incomplete)         :: 39 of 66
            Pseudo Genes (internal stop)      :: 18 of 66
            Pseudo Genes (multiple problems)  :: 16 of 66
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1864736
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="XCN1005-2014-M1"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCYJ010000001-JBJCYJ010000025
WGS_SCAFLD  NZ_JBJCYJ010000001-NZ_JBJCYJ010000025
//
LOCUS       NZ_ADRM01000000      4507171 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis CMCC93014, whole genome shotgun sequencing project.
ACCESSION   NZ_ADRM00000000
VERSION     NZ_ADRM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403061
            Assembly: GCF_000324525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis CMCC93014
  ORGANISM  Yersinia pestis CMCC93014
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4507171)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4507171)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADRM00000000.1.
            The Yersinia pestis CMCC93014 whole genome shotgun (WGS) project
            has the project accession NZ_ADRM00000000.  This version of the
            project (01) has the accession number NZ_ADRM01000000, and consists
            of sequences ADRM01000001-ADRM01000993.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 63X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000324525.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:42:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,397
            CDSs (total)                      :: 4,371
            Genes (coding)                    :: 4,041
            CDSs (with protein)               :: 4,041
            Genes (RNA)                       :: 26
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 19
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 330
            CDSs (without protein)            :: 330
            Pseudo Genes (ambiguous residues) :: 0 of 330
            Pseudo Genes (frameshifted)       :: 92 of 330
            Pseudo Genes (incomplete)         :: 255 of 330
            Pseudo Genes (internal stop)      :: 20 of 330
            Pseudo Genes (multiple problems)  :: 33 of 330
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4507171
                     /organism="Yersinia pestis CMCC93014"
                     /mol_type="genomic DNA"
                     /strain="CMCC93014"
                     /db_xref="taxon:755948"
WGS         ADRM01000001-ADRM01000993
WGS_SCAFLD  NZ_ADRM01000001-NZ_ADRM01000993
//
LOCUS       NZ_JBJCYI010000000   1904344 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain XCN1-2012-M1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCYI000000000
VERSION     NZ_JBJCYI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617883
            Assembly: GCF_056157565.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1904344)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCYI000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCYI000000000.  This version of the
            project (01) has the accession number NZ_JBJCYI010000000, and
            consists of sequences JBJCYI010000001-JBJCYI010000031.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157565.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:36:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,928
            CDSs (total)                      :: 1,883
            Genes (coding)                    :: 1,811
            CDSs (with protein)               :: 1,811
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 38
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 72
            CDSs (without protein)            :: 72
            Pseudo Genes (ambiguous residues) :: 0 of 72
            Pseudo Genes (frameshifted)       :: 32 of 72
            Pseudo Genes (incomplete)         :: 43 of 72
            Pseudo Genes (internal stop)      :: 19 of 72
            Pseudo Genes (multiple problems)  :: 16 of 72
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1904344
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="XCN1-2012-M1"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCYI010000001-JBJCYI010000031
WGS_SCAFLD  NZ_JBJCYI010000001-NZ_JBJCYI010000031
//
LOCUS       NZ_JBJCYM010000000   1899407 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain XCB048-2014-M1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCYM000000000
VERSION     NZ_JBJCYM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617879
            Assembly: GCF_056157645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1899407)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCYM000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCYM000000000.  This version of the
            project (01) has the accession number NZ_JBJCYM010000000, and
            consists of sequences JBJCYM010000001-JBJCYM010000029.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157645.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:40:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,926
            CDSs (total)                      :: 1,876
            Genes (coding)                    :: 1,811
            CDSs (with protein)               :: 1,811
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 30 of 65
            Pseudo Genes (incomplete)         :: 40 of 65
            Pseudo Genes (internal stop)      :: 17 of 65
            Pseudo Genes (multiple problems)  :: 16 of 65
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1899407
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="XCB048-2014-M1"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCYM010000001-JBJCYM010000029
WGS_SCAFLD  NZ_JBJCYM010000001-NZ_JBJCYM010000029
//
LOCUS       NZ_JBJCYK010000000   1789286 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus pyogenes strain XCB33-2012-M1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCYK000000000
VERSION     NZ_JBJCYK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44617881
            Assembly: GCF_056157605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1789286)
  AUTHORS   You,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-NOV-2024) Department of Diagnosis for Communicable
            Diseases, National Institute for Communicable Disease Control and
            Prevention, China CDC, Changbai Road 155, Changping, Beijing,
            Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCYK000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBJCYK000000000.  This version of the
            project (01) has the accession number NZ_JBJCYK010000000, and
            consists of sequences JBJCYK010000001-JBJCYK010000019.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGI
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157605.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 02:39:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,750
            CDSs (total)                      :: 1,711
            Genes (coding)                    :: 1,629
            CDSs (with protein)               :: 1,629
            Genes (RNA)                       :: 39
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 32
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 36 of 82
            Pseudo Genes (incomplete)         :: 46 of 82
            Pseudo Genes (internal stop)      :: 27 of 82
            Pseudo Genes (multiple problems)  :: 22 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1789286
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="XCB33-2012-M1"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="China"
                     /collected_by="National Institute for Communicable Disease
                     Control and Prevention, China CDC"
WGS         JBJCYK010000001-JBJCYK010000019
WGS_SCAFLD  NZ_JBJCYK010000001-NZ_JBJCYK010000019
//
LOCUS       NZ_ADPE01000000      4504947 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis 34202, whole genome shotgun sequencing project.
ACCESSION   NZ_ADPE00000000
VERSION     NZ_ADPE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403000
            Assembly: GCF_000323325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis 34202
  ORGANISM  Yersinia pestis 34202
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4504947)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4504947)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADPE00000000.1.
            The Yersinia pestis 34202 whole genome shotgun (WGS) project has
            the project accession NZ_ADPE00000000.  This version of the project
            (01) has the accession number NZ_ADPE01000000, and consists of
            sequences ADPE01000001-ADPE01001237.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 62X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000323325.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:31:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,537
            CDSs (total)                      :: 4,503
            Genes (coding)                    :: 4,116
            CDSs (with protein)               :: 4,116
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 3, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 20
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 387
            CDSs (without protein)            :: 387
            Pseudo Genes (ambiguous residues) :: 0 of 387
            Pseudo Genes (frameshifted)       :: 88 of 387
            Pseudo Genes (incomplete)         :: 315 of 387
            Pseudo Genes (internal stop)      :: 18 of 387
            Pseudo Genes (multiple problems)  :: 32 of 387
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4504947
                     /organism="Yersinia pestis 34202"
                     /mol_type="genomic DNA"
                     /strain="34202"
                     /db_xref="taxon:755870"
WGS         ADPE01000001-ADPE01001237
WGS_SCAFLD  NZ_ADPE01000001-NZ_ADPE01001237
//
LOCUS       NZ_ADRC01000000      4254189 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis CMCC71001, whole genome shotgun sequencing project.
ACCESSION   NZ_ADRC00000000
VERSION     NZ_ADRC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403051
            Assembly: GCF_000324325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis CMCC71001
  ORGANISM  Yersinia pestis CMCC71001
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4254189)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4254189)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADRC00000000.1.
            The Yersinia pestis CMCC71001 whole genome shotgun (WGS) project
            has the project accession NZ_ADRC00000000.  This version of the
            project (01) has the accession number NZ_ADRC01000000, and consists
            of sequences ADRC01000001-ADRC01001744.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 40X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000324325.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:39:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,534
            CDSs (total)                      :: 4,501
            Genes (coding)                    :: 3,929
            CDSs (with protein)               :: 3,929
            Genes (RNA)                       :: 33
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1, 3 (5S, 23S)
            tRNAs                             :: 20
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 572
            CDSs (without protein)            :: 572
            Pseudo Genes (ambiguous residues) :: 0 of 572
            Pseudo Genes (frameshifted)       :: 73 of 572
            Pseudo Genes (incomplete)         :: 512 of 572
            Pseudo Genes (internal stop)      :: 15 of 572
            Pseudo Genes (multiple problems)  :: 26 of 572
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4254189
                     /organism="Yersinia pestis CMCC71001"
                     /mol_type="genomic DNA"
                     /strain="CMCC71001"
                     /db_xref="taxon:755935"
WGS         ADRC01000001-ADRC01001744
WGS_SCAFLD  NZ_ADRC01000001-NZ_ADRC01001744
//
LOCUS       NZ_ADPY01000000      4413119 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis A1973001, whole genome shotgun sequencing project.
ACCESSION   NZ_ADPY00000000
VERSION     NZ_ADPY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403020
            Assembly: GCF_000323725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis A1973001
  ORGANISM  Yersinia pestis A1973001
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4413119)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4413119)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADPY00000000.1.
            The Yersinia pestis A1973001 whole genome shotgun (WGS) project has
            the project accession NZ_ADPY00000000.  This version of the project
            (01) has the accession number NZ_ADPY01000000, and consists of
            sequences ADPY01000001-ADPY01001539.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 38X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000323725.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:35:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,737
            CDSs (total)                      :: 4,705
            Genes (coding)                    :: 4,215
            CDSs (with protein)               :: 4,215
            Genes (RNA)                       :: 32
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 20
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 490
            CDSs (without protein)            :: 490
            Pseudo Genes (ambiguous residues) :: 0 of 490
            Pseudo Genes (frameshifted)       :: 94 of 490
            Pseudo Genes (incomplete)         :: 408 of 490
            Pseudo Genes (internal stop)      :: 18 of 490
            Pseudo Genes (multiple problems)  :: 28 of 490
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4413119
                     /organism="Yersinia pestis A1973001"
                     /mol_type="genomic DNA"
                     /strain="A1973001"
                     /db_xref="taxon:755874"
WGS         ADPY01000001-ADPY01001539
WGS_SCAFLD  NZ_ADPY01000001-NZ_ADPY01001539
//
LOCUS       NZ_ADRR01000000      4520971 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis CMCCK100001, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ADRR00000000
VERSION     NZ_ADRR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403066
            Assembly: GCF_000324625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis CMCCK100001
  ORGANISM  Yersinia pestis CMCCK100001
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4520971)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4520971)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADRR00000000.1.
            The Yersinia pestis CMCCK100001 whole genome shotgun (WGS) project
            has the project accession NZ_ADRR00000000.  This version of the
            project (01) has the accession number NZ_ADRR01000000, and consists
            of sequences ADRR01000001-ADRR01001406.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 80X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000324625.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:39:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,748
            CDSs (total)                      :: 4,723
            Genes (coding)                    :: 4,267
            CDSs (with protein)               :: 4,267
            Genes (RNA)                       :: 25
            tRNAs                             :: 20
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 456
            CDSs (without protein)            :: 456
            Pseudo Genes (ambiguous residues) :: 0 of 456
            Pseudo Genes (frameshifted)       :: 85 of 456
            Pseudo Genes (incomplete)         :: 380 of 456
            Pseudo Genes (internal stop)      :: 21 of 456
            Pseudo Genes (multiple problems)  :: 26 of 456
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4520971
                     /organism="Yersinia pestis CMCCK100001"
                     /mol_type="genomic DNA"
                     /strain="CMCCK100001"
                     /db_xref="taxon:755954"
WGS         ADRR01000001-ADRR01001406
WGS_SCAFLD  NZ_ADRR01000001-NZ_ADRR01001406
//
LOCUS       NZ_JBTAOZ010000000   9568840 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptomyces alboflavus strain Sd, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTAOZ000000000
VERSION     NZ_JBTAOZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52635763
            Assembly: GCF_056157965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces alboflavus
  ORGANISM  Streptomyces alboflavus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 9568840)
  AUTHORS   Faisal,M. and Sabri,A.N.
  TITLE     Whole-genome sequencing of bioactive rhizosphere bacteria
            associated with medicinal plants
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 9568840)
  AUTHORS   Faisal,M. and Sabri,A.N.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-OCT-2025) Institute of Microbiology and Molecular
            Genetics, University of the Punjab, Institute of Microbiology and
            Molecular Genetics, University of the Punjab, Lahore, Punjab 54000,
            Pakistan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTAOZ000000000.1.
            The Streptomyces alboflavus whole genome shotgun (WGS) project has
            the project accession NZ_JBTAOZ000000000.  This version of the
            project (01) has the accession number NZ_JBTAOZ010000000, and
            consists of sequences JBTAOZ010000001-JBTAOZ010000199.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 15-AUG-2025
            Assembly Method        :: SPAdes v. 3.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 40x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157965.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:37:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 8,149
            CDSs (total)                      :: 8,059
            Genes (coding)                    :: 7,924
            CDSs (with protein)               :: 7,924
            Genes (RNA)                       :: 90
            rRNAs                             :: 6, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 2, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 135
            CDSs (without protein)            :: 135
            Pseudo Genes (ambiguous residues) :: 0 of 135
            Pseudo Genes (frameshifted)       :: 30 of 135
            Pseudo Genes (incomplete)         :: 113 of 135
            Pseudo Genes (internal stop)      :: 6 of 135
            Pseudo Genes (multiple problems)  :: 12 of 135
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9568840
                     /organism="Streptomyces alboflavus"
                     /mol_type="genomic DNA"
                     /strain="Sd"
                     /isolation_source="Catharanthus roseus"
                     /db_xref="taxon:67267"
                     /geo_loc_name="Pakistan: Lahore"
                     /collection_date="2021-05-24"
WGS         JBTAOZ010000001-JBTAOZ010000199
WGS_SCAFLD  NZ_JBTAOZ010000001-NZ_JBTAOZ010000199
//
LOCUS       NZ_ADQO01000000      4495992 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis CMCC18019, whole genome shotgun sequencing project.
ACCESSION   NZ_ADQO00000000
VERSION     NZ_ADQO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403037
            Assembly: GCF_000324045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis CMCC18019
  ORGANISM  Yersinia pestis CMCC18019
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4495992)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4495992)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADQO00000000.1.
            The Yersinia pestis CMCC18019 whole genome shotgun (WGS) project
            has the project accession NZ_ADQO00000000.  This version of the
            project (01) has the accession number NZ_ADQO01000000, and consists
            of sequences ADQO01000001-ADQO01001478.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 40X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000324045.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:38:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,744
            CDSs (total)                      :: 4,710
            Genes (coding)                    :: 4,162
            CDSs (with protein)               :: 4,162
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1, 3 (5S, 23S)
            tRNAs                             :: 20
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 548
            CDSs (without protein)            :: 548
            Pseudo Genes (ambiguous residues) :: 0 of 548
            Pseudo Genes (frameshifted)       :: 110 of 548
            Pseudo Genes (incomplete)         :: 455 of 548
            Pseudo Genes (internal stop)      :: 18 of 548
            Pseudo Genes (multiple problems)  :: 33 of 548
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4495992
                     /organism="Yersinia pestis CMCC18019"
                     /mol_type="genomic DNA"
                     /strain="CMCC18019"
                     /db_xref="taxon:755917"
WGS         ADQO01000001-ADQO01001478
WGS_SCAFLD  NZ_ADQO01000001-NZ_ADQO01001478
//
LOCUS       NZ_ADSB01000000      4463713 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis F1946001, whole genome shotgun sequencing project.
ACCESSION   NZ_ADSB00000000
VERSION     NZ_ADSB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403075
            Assembly: GCF_000324825.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis F1946001
  ORGANISM  Yersinia pestis F1946001
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4463713)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4463713)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADSB00000000.1.
            The Yersinia pestis F1946001 whole genome shotgun (WGS) project has
            the project accession NZ_ADSB00000000.  This version of the project
            (01) has the accession number NZ_ADSB01000000, and consists of
            sequences ADSB01000001-ADSB01001383.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 44X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000324825.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:44:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,645
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,116
            CDSs (with protein)               :: 4,116
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 22
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 495
            CDSs (without protein)            :: 495
            Pseudo Genes (ambiguous residues) :: 0 of 495
            Pseudo Genes (frameshifted)       :: 88 of 495
            Pseudo Genes (incomplete)         :: 412 of 495
            Pseudo Genes (internal stop)      :: 20 of 495
            Pseudo Genes (multiple problems)  :: 23 of 495
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4463713
                     /organism="Yersinia pestis F1946001"
                     /mol_type="genomic DNA"
                     /strain="F1946001"
                     /db_xref="taxon:755907"
WGS         ADSB01000001-ADSB01001383
WGS_SCAFLD  NZ_ADSB01000001-NZ_ADSB01001383
//
LOCUS       NZ_ADQR01000000      4413744 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis CMCC31004, whole genome shotgun sequencing project.
ACCESSION   NZ_ADQR00000000
VERSION     NZ_ADQR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403040
            Assembly: GCF_000324105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis CMCC31004
  ORGANISM  Yersinia pestis CMCC31004
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4413744)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4413744)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADQR00000000.1.
            The Yersinia pestis CMCC31004 whole genome shotgun (WGS) project
            has the project accession NZ_ADQR00000000.  This version of the
            project (01) has the accession number NZ_ADQR01000000, and consists
            of sequences ADQR01000001-ADQR01001229.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 61X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000324105.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:36:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,386
            CDSs (total)                      :: 4,355
            Genes (coding)                    :: 3,945
            CDSs (with protein)               :: 3,945
            Genes (RNA)                       :: 31
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 20
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 410
            CDSs (without protein)            :: 410
            Pseudo Genes (ambiguous residues) :: 0 of 410
            Pseudo Genes (frameshifted)       :: 77 of 410
            Pseudo Genes (incomplete)         :: 342 of 410
            Pseudo Genes (internal stop)      :: 17 of 410
            Pseudo Genes (multiple problems)  :: 24 of 410
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4413744
                     /organism="Yersinia pestis CMCC31004"
                     /mol_type="genomic DNA"
                     /strain="CMCC31004"
                     /db_xref="taxon:755920"
WGS         ADQR01000001-ADQR01001229
WGS_SCAFLD  NZ_ADQR01000001-NZ_ADQR01001229
//
LOCUS       NZ_ADQS01000000      4514951 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis CMCC347001, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ADQS00000000
VERSION     NZ_ADQS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403041
            Assembly: GCF_000324125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis CMCC347001
  ORGANISM  Yersinia pestis CMCC347001
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4514951)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4514951)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADQS00000000.1.
            The Yersinia pestis CMCC347001 whole genome shotgun (WGS) project
            has the project accession NZ_ADQS00000000.  This version of the
            project (01) has the accession number NZ_ADQS01000000, and consists
            of sequences ADQS01000001-ADQS01001207.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 37X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000324125.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:44:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,557
            CDSs (total)                      :: 4,529
            Genes (coding)                    :: 4,095
            CDSs (with protein)               :: 4,095
            Genes (RNA)                       :: 28
            rRNAs                             :: 3, 1 (16S, 23S)
            partial rRNAs                     :: 3, 1 (16S, 23S)
            tRNAs                             :: 19
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 434
            CDSs (without protein)            :: 434
            Pseudo Genes (ambiguous residues) :: 0 of 434
            Pseudo Genes (frameshifted)       :: 91 of 434
            Pseudo Genes (incomplete)         :: 354 of 434
            Pseudo Genes (internal stop)      :: 20 of 434
            Pseudo Genes (multiple problems)  :: 28 of 434
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4514951
                     /organism="Yersinia pestis CMCC347001"
                     /mol_type="genomic DNA"
                     /strain="CMCC347001"
                     /db_xref="taxon:755921"
WGS         ADQS01000001-ADQS01001207
WGS_SCAFLD  NZ_ADQS01000001-NZ_ADQS01001207
//
LOCUS       NZ_ADPP01000000      4449879 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis 710317, whole genome shotgun sequencing project.
ACCESSION   NZ_ADPP00000000
VERSION     NZ_ADPP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403011
            Assembly: GCF_000323545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis 710317
  ORGANISM  Yersinia pestis 710317
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4449879)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4449879)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADPP00000000.1.
            The Yersinia pestis 710317 whole genome shotgun (WGS) project has
            the project accession NZ_ADPP00000000.  This version of the project
            (01) has the accession number NZ_ADPP01000000, and consists of
            sequences ADPP01000001-ADPP01001119.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 44X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000323545.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:39:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,410
            CDSs (total)                      :: 4,379
            Genes (coding)                    :: 4,031
            CDSs (with protein)               :: 4,031
            Genes (RNA)                       :: 31
            rRNAs                             :: 1, 2 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 20
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 348
            CDSs (without protein)            :: 348
            Pseudo Genes (ambiguous residues) :: 0 of 348
            Pseudo Genes (frameshifted)       :: 85 of 348
            Pseudo Genes (incomplete)         :: 277 of 348
            Pseudo Genes (internal stop)      :: 18 of 348
            Pseudo Genes (multiple problems)  :: 30 of 348
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4449879
                     /organism="Yersinia pestis 710317"
                     /mol_type="genomic DNA"
                     /strain="710317"
                     /db_xref="taxon:755885"
WGS         ADPP01000001-ADPP01001119
WGS_SCAFLD  NZ_ADPP01000001-NZ_ADPP01001119
//
LOCUS       NZ_ADQT01000000      4571405 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis CMCC348002, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ADQT00000000
VERSION     NZ_ADQT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403042
            Assembly: GCF_000324145.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis CMCC348002
  ORGANISM  Yersinia pestis CMCC348002
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4571405)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4571405)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADQT00000000.1.
            The Yersinia pestis CMCC348002 whole genome shotgun (WGS) project
            has the project accession NZ_ADQT00000000.  This version of the
            project (01) has the accession number NZ_ADQT01000000, and consists
            of sequences ADQT01000001-ADQT01000846.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 65X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000324145.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:44:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,378
            CDSs (total)                      :: 4,346
            Genes (coding)                    :: 4,049
            CDSs (with protein)               :: 4,049
            Genes (RNA)                       :: 32
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 20
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 297
            CDSs (without protein)            :: 297
            Pseudo Genes (ambiguous residues) :: 0 of 297
            Pseudo Genes (frameshifted)       :: 91 of 297
            Pseudo Genes (incomplete)         :: 220 of 297
            Pseudo Genes (internal stop)      :: 18 of 297
            Pseudo Genes (multiple problems)  :: 29 of 297
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4571405
                     /organism="Yersinia pestis CMCC348002"
                     /mol_type="genomic DNA"
                     /strain="CMCC348002"
                     /db_xref="taxon:755922"
WGS         ADQT01000001-ADQT01000846
WGS_SCAFLD  NZ_ADQT01000001-NZ_ADQT01000846
//
LOCUS       NZ_ADQD01000000      4366616 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis CMCC03001, whole genome shotgun sequencing project.
ACCESSION   NZ_ADQD00000000
VERSION     NZ_ADQD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403026
            Assembly: GCF_000323825.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis CMCC03001
  ORGANISM  Yersinia pestis CMCC03001
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4366616)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4366616)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADQD00000000.1.
            The Yersinia pestis CMCC03001 whole genome shotgun (WGS) project
            has the project accession NZ_ADQD00000000.  This version of the
            project (01) has the accession number NZ_ADQD01000000, and consists
            of sequences ADQD01000001-ADQD01001082.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 44X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000323825.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:34:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,306
            CDSs (total)                      :: 4,275
            Genes (coding)                    :: 3,927
            CDSs (with protein)               :: 3,927
            Genes (RNA)                       :: 31
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 20
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 348
            CDSs (without protein)            :: 348
            Pseudo Genes (ambiguous residues) :: 0 of 348
            Pseudo Genes (frameshifted)       :: 81 of 348
            Pseudo Genes (incomplete)         :: 278 of 348
            Pseudo Genes (internal stop)      :: 17 of 348
            Pseudo Genes (multiple problems)  :: 26 of 348
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4366616
                     /organism="Yersinia pestis CMCC03001"
                     /mol_type="genomic DNA"
                     /strain="CMCC03001"
                     /db_xref="taxon:755899"
WGS         ADQD01000001-ADQD01001082
WGS_SCAFLD  NZ_ADQD01000001-NZ_ADQD01001082
//
LOCUS       NZ_ADQM01000000      4341435 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis CMCC12003, whole genome shotgun sequencing project.
ACCESSION   NZ_ADQM00000000
VERSION     NZ_ADQM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403035
            Assembly: GCF_000324005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis CMCC12003
  ORGANISM  Yersinia pestis CMCC12003
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4341435)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4341435)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADQM00000000.1.
            The Yersinia pestis CMCC12003 whole genome shotgun (WGS) project
            has the project accession NZ_ADQM00000000.  This version of the
            project (01) has the accession number NZ_ADQM01000000, and consists
            of sequences ADQM01000001-ADQM01001045.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 54X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000324005.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:38:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,242
            CDSs (total)                      :: 4,209
            Genes (coding)                    :: 3,882
            CDSs (with protein)               :: 3,882
            Genes (RNA)                       :: 33
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1, 3 (5S, 23S)
            tRNAs                             :: 20
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 84 of 327
            Pseudo Genes (incomplete)         :: 252 of 327
            Pseudo Genes (internal stop)      :: 22 of 327
            Pseudo Genes (multiple problems)  :: 29 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4341435
                     /organism="Yersinia pestis CMCC12003"
                     /mol_type="genomic DNA"
                     /strain="CMCC12003"
                     /db_xref="taxon:755909"
WGS         ADQM01000001-ADQM01001045
WGS_SCAFLD  NZ_ADQM01000001-NZ_ADQM01001045
//
LOCUS       NZ_ADRX01000000      4506081 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis D1991004, whole genome shotgun sequencing project.
ACCESSION   NZ_ADRX00000000
VERSION     NZ_ADRX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403072
            Assembly: GCF_000324745.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis D1991004
  ORGANISM  Yersinia pestis D1991004
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4506081)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4506081)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADRX00000000.1.
            The Yersinia pestis D1991004 whole genome shotgun (WGS) project has
            the project accession NZ_ADRX00000000.  This version of the project
            (01) has the accession number NZ_ADRX01000000, and consists of
            sequences ADRX01000001-ADRX01001270.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 42X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000324745.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:48:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,640
            CDSs (total)                      :: 4,608
            Genes (coding)                    :: 4,202
            CDSs (with protein)               :: 4,202
            Genes (RNA)                       :: 32
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 20
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 406
            CDSs (without protein)            :: 406
            Pseudo Genes (ambiguous residues) :: 0 of 406
            Pseudo Genes (frameshifted)       :: 92 of 406
            Pseudo Genes (incomplete)         :: 329 of 406
            Pseudo Genes (internal stop)      :: 16 of 406
            Pseudo Genes (multiple problems)  :: 28 of 406
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4506081
                     /organism="Yersinia pestis D1991004"
                     /mol_type="genomic DNA"
                     /strain="D1991004"
                     /db_xref="taxon:755892"
WGS         ADRX01000001-ADRX01001270
WGS_SCAFLD  NZ_ADRX01000001-NZ_ADRX01001270
//
LOCUS       NZ_JBTAPA010000000   8166526 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptomyces iakyrus strain Da, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTAPA000000000
VERSION     NZ_JBTAPA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN52635764
            Assembly: GCF_056157945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces iakyrus
  ORGANISM  Streptomyces iakyrus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 8166526)
  AUTHORS   Faisal,M. and Sabri,A.N.
  TITLE     Whole-genome sequencing of bioactive rhizosphere bacteria
            associated with medicinal plants
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8166526)
  AUTHORS   Faisal,M. and Sabri,A.N.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-OCT-2025) Institute of Microbiology and Molecular
            Genetics, University of the Punjab, Institute of Microbiology and
            Molecular Genetics, University of the Punjab, Lahore, Punjab 54000,
            Pakistan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTAPA000000000.1.
            The Streptomyces iakyrus whole genome shotgun (WGS) project has the
            project accession NZ_JBTAPA000000000.  This version of the project
            (01) has the accession number NZ_JBTAPA010000000, and consists of
            sequences JBTAPA010000001-JBTAPA010000054.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 15-AUG-2025
            Assembly Method        :: SPAdes v. 3.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 40x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056157945.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 03:44:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,497
            CDSs (total)                      :: 7,417
            Genes (coding)                    :: 7,233
            CDSs (with protein)               :: 7,233
            Genes (RNA)                       :: 80
            rRNAs                             :: 6, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 2 (5S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 184
            CDSs (without protein)            :: 184
            Pseudo Genes (ambiguous residues) :: 0 of 184
            Pseudo Genes (frameshifted)       :: 66 of 184
            Pseudo Genes (incomplete)         :: 147 of 184
            Pseudo Genes (internal stop)      :: 11 of 184
            Pseudo Genes (multiple problems)  :: 38 of 184
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8166526
                     /organism="Streptomyces iakyrus"
                     /mol_type="genomic DNA"
                     /strain="Da"
                     /isolation_source="Terminalia chebula"
                     /db_xref="taxon:68219"
                     /geo_loc_name="Pakistan: Lahore"
                     /collection_date="2021-05-24"
WGS         JBTAPA010000001-JBTAPA010000054
WGS_SCAFLD  NZ_JBTAPA010000001-NZ_JBTAPA010000054
//
LOCUS       NZ_ADOZ01000000      4475655 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis 2504, whole genome shotgun sequencing project.
ACCESSION   NZ_ADOZ00000000
VERSION     NZ_ADOZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02402995
            Assembly: GCF_000323205.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis 2504
  ORGANISM  Yersinia pestis 2504
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4475655)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4475655)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADOZ00000000.1.
            The Yersinia pestis 2504 whole genome shotgun (WGS) project has the
            project accession NZ_ADOZ00000000.  This version of the project
            (01) has the accession number NZ_ADOZ01000000, and consists of
            sequences ADOZ01000001-ADOZ01000975.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 84X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000323205.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:37:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,364
            CDSs (total)                      :: 4,340
            Genes (coding)                    :: 4,032
            CDSs (with protein)               :: 4,032
            Genes (RNA)                       :: 24
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 17
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 308
            CDSs (without protein)            :: 308
            Pseudo Genes (ambiguous residues) :: 0 of 308
            Pseudo Genes (frameshifted)       :: 84 of 308
            Pseudo Genes (incomplete)         :: 239 of 308
            Pseudo Genes (internal stop)      :: 19 of 308
            Pseudo Genes (multiple problems)  :: 32 of 308
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4475655
                     /organism="Yersinia pestis 2504"
                     /mol_type="genomic DNA"
                     /strain="2504"
                     /db_xref="taxon:755863"
WGS         ADOZ01000001-ADOZ01000975
WGS_SCAFLD  NZ_ADOZ01000001-NZ_ADOZ01000975
//
LOCUS       NZ_ADQY01000000      4420992 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis CMCC51020, whole genome shotgun sequencing project.
ACCESSION   NZ_ADQY00000000
VERSION     NZ_ADQY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403047
            Assembly: GCF_000324245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis CMCC51020
  ORGANISM  Yersinia pestis CMCC51020
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4420992)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4420992)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADQY00000000.1.
            The Yersinia pestis CMCC51020 whole genome shotgun (WGS) project
            has the project accession NZ_ADQY00000000.  This version of the
            project (01) has the accession number NZ_ADQY01000000, and consists
            of sequences ADQY01000001-ADQY01001118.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 53X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000324245.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:50:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,298
            CDSs (total)                      :: 4,265
            Genes (coding)                    :: 3,917
            CDSs (with protein)               :: 3,917
            Genes (RNA)                       :: 33
            rRNAs                             :: 1, 2, 2 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 20
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 348
            CDSs (without protein)            :: 348
            Pseudo Genes (ambiguous residues) :: 0 of 348
            Pseudo Genes (frameshifted)       :: 85 of 348
            Pseudo Genes (incomplete)         :: 279 of 348
            Pseudo Genes (internal stop)      :: 16 of 348
            Pseudo Genes (multiple problems)  :: 30 of 348
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4420992
                     /organism="Yersinia pestis CMCC51020"
                     /mol_type="genomic DNA"
                     /strain="CMCC51020"
                     /db_xref="taxon:755930"
WGS         ADQY01000001-ADQY01001118
WGS_SCAFLD  NZ_ADQY01000001-NZ_ADQY01001118
//
LOCUS       NZ_ALIL01000000      1619896 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptococcus thermophilus MTCC 5461, whole genome shotgun
            sequencing project.
ACCESSION   NZ_ALIL00000000
VERSION     NZ_ALIL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02470979
            Assembly: GCF_000335495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus thermophilus MTCC 5461
  ORGANISM  Streptococcus thermophilus MTCC 5461
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1619896)
  AUTHORS   Prajapati,J.B., Nathani,N.M., Patel,A.K., Senan,S. and Joshi,C.G.
  TITLE     Genomic analysis of dairy starter culture Streptococcus
            thermophilus MTCC 5461
  JOURNAL   J Microbiol Biotechnol 23 (4), 459-466 (2013)
   PUBMED   23568199
REFERENCE   2  (bases 1 to 1619896)
  AUTHORS   Prajapati,J.B., Dave,R.I., Senan,S.H., Sreeja,V., Koringa,P.G.,
            Jakhesara,S.J., Ahir,V.B., Shah,T.M., Patel,A.B., Nathani,N.M.,
            Bhatt,V.D., Sajnani,M.R. and Joshi,C.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-JUL-2012) Dairy Microbiology, Sheth MC College of
            Dairy Science, Anand Agricultural University, Anand, Gujarat
            388001, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ALIL00000000.1.
            The Streptococcus thermophilus MTCC 5461 whole genome shotgun (WGS)
            project has the project accession NZ_ALIL00000000.  This version of
            the project (01) has the accession number NZ_ALIL01000000, and
            consists of sequences ALIL01000001-ALIL01000144.
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            
            Reference-guided assembly based on Streptococcus thermophilus
            CNRZ1066 deposited in INSD Accession Number CP000024.1.
            
            Source DNA available from: Microbial Type Culture Collection,
            IMTECH, Sector 39A, Chandigarh 160036, India.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: GS Reference Mapper v. 2.6
            Genome Coverage       :: 52.59x
            Sequencing Technology :: 454 GS FLX Titanium
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000335495.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:15:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,779
            CDSs (total)                      :: 1,697
            Genes (coding)                    :: 1,449
            CDSs (with protein)               :: 1,449
            Genes (RNA)                       :: 82
            rRNAs                             :: 4, 13, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 1, 13, 6 (5S, 16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 248
            CDSs (without protein)            :: 248
            Pseudo Genes (ambiguous residues) :: 0 of 248
            Pseudo Genes (frameshifted)       :: 163 of 248
            Pseudo Genes (incomplete)         :: 97 of 248
            Pseudo Genes (internal stop)      :: 83 of 248
            Pseudo Genes (multiple problems)  :: 80 of 248
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1619896
                     /organism="Streptococcus thermophilus MTCC 5461"
                     /mol_type="genomic DNA"
                     /strain="MTCC 5461"
                     /isolation_source="fermented milk product (curd)"
                     /db_xref="taxon:1073570"
                     /geo_loc_name="India"
                     /collection_date="1984-10"
WGS         ALIL01000001-ALIL01000144
WGS_SCAFLD  NZ_ALIL01000001-NZ_ALIL01000144
//
LOCUS       NZ_ADQE01000000      4501730 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis CMCC05009, whole genome shotgun sequencing project.
ACCESSION   NZ_ADQE00000000
VERSION     NZ_ADQE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403027
            Assembly: GCF_000323845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis CMCC05009
  ORGANISM  Yersinia pestis CMCC05009
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4501730)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4501730)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADQE00000000.1.
            The Yersinia pestis CMCC05009 whole genome shotgun (WGS) project
            has the project accession NZ_ADQE00000000.  This version of the
            project (01) has the accession number NZ_ADQE01000000, and consists
            of sequences ADQE01000001-ADQE01001501.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 61X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000323845.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:40:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,638
            CDSs (total)                      :: 4,602
            Genes (coding)                    :: 4,151
            CDSs (with protein)               :: 4,151
            Genes (RNA)                       :: 36
            rRNAs                             :: 1, 3, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 23
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 451
            CDSs (without protein)            :: 451
            Pseudo Genes (ambiguous residues) :: 0 of 451
            Pseudo Genes (frameshifted)       :: 82 of 451
            Pseudo Genes (incomplete)         :: 383 of 451
            Pseudo Genes (internal stop)      :: 17 of 451
            Pseudo Genes (multiple problems)  :: 28 of 451
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4501730
                     /organism="Yersinia pestis CMCC05009"
                     /mol_type="genomic DNA"
                     /strain="CMCC05009"
                     /db_xref="taxon:755900"
WGS         ADQE01000001-ADQE01001501
WGS_SCAFLD  NZ_ADQE01000001-NZ_ADQE01001501
//
LOCUS       NZ_ADQH01000000      4494768 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis CMCC104003, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ADQH00000000
VERSION     NZ_ADQH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403030
            Assembly: GCF_000323905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis CMCC104003
  ORGANISM  Yersinia pestis CMCC104003
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4494768)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4494768)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADQH00000000.1.
            The Yersinia pestis CMCC104003 whole genome shotgun (WGS) project
            has the project accession NZ_ADQH00000000.  This version of the
            project (01) has the accession number NZ_ADQH01000000, and consists
            of sequences ADQH01000001-ADQH01001387.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 79X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000323905.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:42:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,621
            CDSs (total)                      :: 4,584
            Genes (coding)                    :: 4,123
            CDSs (with protein)               :: 4,123
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 5, 4 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 5, 4 (5S, 16S, 23S)
            tRNAs                             :: 19
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 461
            CDSs (without protein)            :: 461
            Pseudo Genes (ambiguous residues) :: 0 of 461
            Pseudo Genes (frameshifted)       :: 90 of 461
            Pseudo Genes (incomplete)         :: 384 of 461
            Pseudo Genes (internal stop)      :: 17 of 461
            Pseudo Genes (multiple problems)  :: 28 of 461
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4494768
                     /organism="Yersinia pestis CMCC104003"
                     /mol_type="genomic DNA"
                     /strain="CMCC104003"
                     /db_xref="taxon:755903"
WGS         ADQH01000001-ADQH01001387
WGS_SCAFLD  NZ_ADQH01000001-NZ_ADQH01001387
//
LOCUS       NZ_ADQI01000000      4424589 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis CMCC106002, whole genome shotgun sequencing
            project.
ACCESSION   NZ_ADQI00000000
VERSION     NZ_ADQI00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403031
            Assembly: GCF_000323925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis CMCC106002
  ORGANISM  Yersinia pestis CMCC106002
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4424589)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4424589)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADQI00000000.1.
            The Yersinia pestis CMCC106002 whole genome shotgun (WGS) project
            has the project accession NZ_ADQI00000000.  This version of the
            project (01) has the accession number NZ_ADQI01000000, and consists
            of sequences ADQI01000001-ADQI01001176.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 67X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000323925.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:45:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,358
            CDSs (total)                      :: 4,327
            Genes (coding)                    :: 3,932
            CDSs (with protein)               :: 3,932
            Genes (RNA)                       :: 31
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 20
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 395
            CDSs (without protein)            :: 395
            Pseudo Genes (ambiguous residues) :: 0 of 395
            Pseudo Genes (frameshifted)       :: 82 of 395
            Pseudo Genes (incomplete)         :: 324 of 395
            Pseudo Genes (internal stop)      :: 17 of 395
            Pseudo Genes (multiple problems)  :: 26 of 395
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4424589
                     /organism="Yersinia pestis CMCC106002"
                     /mol_type="genomic DNA"
                     /strain="CMCC106002"
                     /db_xref="taxon:755904"
WGS         ADQI01000001-ADQI01001176
WGS_SCAFLD  NZ_ADQI01000001-NZ_ADQI01001176
//
LOCUS       NZ_SGFG01000000      7931146 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Streptomyces tsukubensis strain VKM Ac-2618D, whole genome shotgun
            sequencing project.
ACCESSION   NZ_SGFG00000000
VERSION     NZ_SGFG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10872834
            Assembly: GCF_004295505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces tsukubensis
  ORGANISM  Streptomyces tsukubensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 7931146)
  AUTHORS   Poshekhontseva,V.Y., Bragin,E.Y., Fokina,V.V., Shtratnikova,V.Y.,
            Starodumova,I.P., Tarlachkov,S.V. and Donova,M.V.
  TITLE     Draft Genome Sequence of FK506-Producing Streptomyces tsukubensis
            Strain VKM Ac-2618D
  JOURNAL   Microbiol Resour Announc 8 (24), e00510-19 (2019)
   PUBMED   31196928
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7931146)
  AUTHORS   Poshekhontseva,V.Y., Bragin,E.Y., Fokina,V., Starodumova,I.P.,
            Tarlachkov,S.V. and Donova,M.V.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-FEB-2019) G.K. Skryabin Institute of Biochemistry and
            Physiology of Microorganisms Russian Academy of Sciences, FRC
            Pushchino Center for Biological Research of the Russian Academy of
            Sciences, pr. Nauki, 5, Pushchino 142290, Russian Federation
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SGFG00000000.1.
            The Streptomyces tsukubensis whole genome shotgun (WGS) project has
            the project accession NZ_SGFG00000000.  This version of the project
            (01) has the accession number NZ_SGFG01000000, and consists of
            sequences SGFG01000001-SGFG01000079.
            
            Annotation modified by submitter.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: FEB-2019
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 202.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004295505.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 13:01:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,600
            CDSs (total)                      :: 6,512
            Genes (coding)                    :: 6,419
            CDSs (with protein)               :: 6,419
            Genes (RNA)                       :: 88
            rRNAs                             :: 6, 3, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 4, 2, 9 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 94
            CDSs (without protein)            :: 93
            Pseudo Genes (ambiguous residues) :: 0 of 94
            Pseudo Genes (frameshifted)       :: 14 of 94
            Pseudo Genes (incomplete)         :: 83 of 94
            Pseudo Genes (internal stop)      :: 5 of 94
            Pseudo Genes (multiple problems)  :: 8 of 94
            CRISPR Arrays                     :: 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7931146
                     /organism="Streptomyces tsukubensis"
                     /mol_type="genomic DNA"
                     /strain="VKM Ac-2618D"
                     /db_xref="taxon:83656"
                     /geo_loc_name="Russia"
                     /collection_date="2012"
WGS         SGFG01000001-SGFG01000079
WGS_SCAFLD  NZ_SGFG01000001-NZ_SGFG01000079
//
LOCUS       NZ_ADQC01000000      4489186 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis CMCC02041, whole genome shotgun sequencing project.
ACCESSION   NZ_ADQC00000000
VERSION     NZ_ADQC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403025
            Assembly: GCF_000323805.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis CMCC02041
  ORGANISM  Yersinia pestis CMCC02041
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4489186)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4489186)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADQC00000000.1.
            The Yersinia pestis CMCC02041 whole genome shotgun (WGS) project
            has the project accession NZ_ADQC00000000.  This version of the
            project (01) has the accession number NZ_ADQC01000000, and consists
            of sequences ADQC01000001-ADQC01001281.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 70X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000323805.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:55:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,563
            CDSs (total)                      :: 4,526
            Genes (coding)                    :: 4,115
            CDSs (with protein)               :: 4,115
            Genes (RNA)                       :: 37
            rRNAs                             :: 1, 4, 4 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 20
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 411
            CDSs (without protein)            :: 411
            Pseudo Genes (ambiguous residues) :: 0 of 411
            Pseudo Genes (frameshifted)       :: 83 of 411
            Pseudo Genes (incomplete)         :: 341 of 411
            Pseudo Genes (internal stop)      :: 18 of 411
            Pseudo Genes (multiple problems)  :: 29 of 411
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4489186
                     /organism="Yersinia pestis CMCC02041"
                     /mol_type="genomic DNA"
                     /strain="CMCC02041"
                     /db_xref="taxon:755898"
WGS         ADQC01000001-ADQC01001281
WGS_SCAFLD  NZ_ADQC01000001-NZ_ADQC01001281
//
LOCUS       NZ_ADPT01000000      4452201 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis 9, whole genome shotgun sequencing project.
ACCESSION   NZ_ADPT00000000
VERSION     NZ_ADPT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403015
            Assembly: GCF_000323625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis 9
  ORGANISM  Yersinia pestis 9
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4452201)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4452201)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADPT00000000.1.
            The Yersinia pestis 9 whole genome shotgun (WGS) project has the
            project accession NZ_ADPT00000000.  This version of the project
            (01) has the accession number NZ_ADPT01000000, and consists of
            sequences ADPT01000001-ADPT01001336.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 44X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000323625.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:56:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,549
            CDSs (total)                      :: 4,515
            Genes (coding)                    :: 4,098
            CDSs (with protein)               :: 4,098
            Genes (RNA)                       :: 34
            rRNAs                             :: 1, 3, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 20
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 417
            CDSs (without protein)            :: 417
            Pseudo Genes (ambiguous residues) :: 0 of 417
            Pseudo Genes (frameshifted)       :: 94 of 417
            Pseudo Genes (incomplete)         :: 337 of 417
            Pseudo Genes (internal stop)      :: 17 of 417
            Pseudo Genes (multiple problems)  :: 29 of 417
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4452201
                     /organism="Yersinia pestis 9"
                     /mol_type="genomic DNA"
                     /strain="9"
                     /db_xref="taxon:755896"
WGS         ADPT01000001-ADPT01001336
WGS_SCAFLD  NZ_ADPT01000001-NZ_ADPT01001336
//
LOCUS       NZ_ADPX01000000      4508534 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis A1956001, whole genome shotgun sequencing project.
ACCESSION   NZ_ADPX00000000
VERSION     NZ_ADPX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403019
            Assembly: GCF_000323705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis A1956001
  ORGANISM  Yersinia pestis A1956001
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4508534)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4508534)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADPX00000000.1.
            The Yersinia pestis A1956001 whole genome shotgun (WGS) project has
            the project accession NZ_ADPX00000000.  This version of the project
            (01) has the accession number NZ_ADPX01000000, and consists of
            sequences ADPX01000001-ADPX01000852.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 62X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000323705.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:57:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,286
            CDSs (total)                      :: 4,253
            Genes (coding)                    :: 3,975
            CDSs (with protein)               :: 3,975
            Genes (RNA)                       :: 33
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1, 3 (5S, 23S)
            tRNAs                             :: 20
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 278
            CDSs (without protein)            :: 278
            Pseudo Genes (ambiguous residues) :: 0 of 278
            Pseudo Genes (frameshifted)       :: 82 of 278
            Pseudo Genes (incomplete)         :: 211 of 278
            Pseudo Genes (internal stop)      :: 16 of 278
            Pseudo Genes (multiple problems)  :: 29 of 278
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4508534
                     /organism="Yersinia pestis A1956001"
                     /mol_type="genomic DNA"
                     /strain="A1956001"
                     /db_xref="taxon:755924"
WGS         ADPX01000001-ADPX01000852
WGS_SCAFLD  NZ_ADPX01000001-NZ_ADPX01000852
//
LOCUS       NZ_VZQA01000000      4431704 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Aeromonas veronii strain D, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VZQA00000000
VERSION     NZ_VZQA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12777764
            Assembly: GCF_008802305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas veronii (Aeromonas ichthiosmia)
  ORGANISM  Aeromonas veronii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (bases 1 to 4431704)
  AUTHORS   Mann,B.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-SEP-2019) Unit for Environmental Science and
            Management, North West University, Hoffman str 11, Potchefstroom,
            North-West 5002, South Africa
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VZQA00000000.1.
            The Aeromonas veronii whole genome shotgun (WGS) project has the
            project accession NZ_VZQA00000000.  This version of the project
            (01) has the accession number NZ_VZQA01000000, and consists of
            sequences VZQA01000001-VZQA01000149.
            Bacteria and source DNA available from NWU, Dr JJ Bezuidenhout.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_008802305.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:20:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,183
            CDSs (total)                      :: 4,047
            Genes (coding)                    :: 3,986
            CDSs (with protein)               :: 3,986
            Genes (RNA)                       :: 136
            rRNAs                             :: 10, 6, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 1 (5S, 16S)
            partial rRNAs                     :: 2, 5, 9 (5S, 16S, 23S)
            tRNAs                             :: 107
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 61
            CDSs (without protein)            :: 61
            Pseudo Genes (ambiguous residues) :: 0 of 61
            Pseudo Genes (frameshifted)       :: 18 of 61
            Pseudo Genes (incomplete)         :: 44 of 61
            Pseudo Genes (internal stop)      :: 5 of 61
            Pseudo Genes (multiple problems)  :: 6 of 61
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4431704
                     /organism="Aeromonas veronii"
                     /mol_type="genomic DNA"
                     /strain="D"
                     /isolation_source="water"
                     /db_xref="taxon:654"
                     /geo_loc_name="South Africa"
                     /lat_lon="26.7145 S 27.0970 E"
                     /collection_date="2017"
                     /collected_by="BC Mann"
WGS         VZQA01000001-VZQA01000149
WGS_SCAFLD  NZ_VZQA01000001-NZ_VZQA01000149
//
LOCUS       NZ_SZVM01000000      4517428 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Aeromonas veronii strain WB12, whole genome shotgun sequencing
            project.
ACCESSION   NZ_SZVM00000000
VERSION     NZ_SZVM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11533742
            Assembly: GCF_007654995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas veronii (Aeromonas ichthiosmia)
  ORGANISM  Aeromonas veronii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (bases 1 to 4517428)
  AUTHORS   Wubin,W.W.
  TITLE     Draft Genome Sequence of Aeromonas veronii WB12
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4517428)
  AUTHORS   Wubin,W.W.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-MAY-2019) Microbiology Laboratory, Hunan Normal
            University, Orange Island Street, Changsha, Hunan 410006, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SZVM00000000.1.
            The Aeromonas veronii whole genome shotgun (WGS) project has the
            project accession NZ_SZVM00000000.  This version of the project
            (01) has the accession number NZ_SZVM01000000, and consists of
            sequences SZVM01000001-SZVM01000040.
            Bacteria and source DNA available from Microbiology Laboratory,
            College of Life Sciences, Hunan Normal University.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo2 v. April-2019
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007654995.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:15:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,166
            CDSs (total)                      :: 4,040
            Genes (coding)                    :: 3,987
            CDSs (with protein)               :: 3,987
            Genes (RNA)                       :: 126
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 117
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 53
            CDSs (without protein)            :: 53
            Pseudo Genes (ambiguous residues) :: 0 of 53
            Pseudo Genes (frameshifted)       :: 28 of 53
            Pseudo Genes (incomplete)         :: 32 of 53
            Pseudo Genes (internal stop)      :: 9 of 53
            Pseudo Genes (multiple problems)  :: 15 of 53
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4517428
                     /organism="Aeromonas veronii"
                     /mol_type="genomic DNA"
                     /strain="WB12"
                     /isolation_source="intestines of sick fish"
                     /host="Carassius auratus"
                     /db_xref="taxon:654"
                     /geo_loc_name="China: Changsha"
                     /lat_lon="28.13 N 112.55 E"
                     /collection_date="2018"
WGS         SZVM01000001-SZVM01000040
WGS_SCAFLD  NZ_SZVM01000001-NZ_SZVM01000040
//
LOCUS       NZ_CAAKNL010000000   4740061 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Aeromonas veronii isolate KLG5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_CAAKNL000000000
VERSION     NZ_CAAKNL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5282780
            Assembly: GCF_901212355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas veronii (Aeromonas ichthiosmia)
  ORGANISM  Aeromonas veronii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1
  AUTHORS   Green R,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-APR-2019) UNIVERSITY OF SHEFFIELD, University of
            Sheffield Medical School, Beech Hill Rd, Sheffield, S10 2RX, United
            Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAAKNL000000000.1.
            The Aeromonas veronii whole genome shotgun (WGS) project has the
            project accession NZ_CAAKNL000000000.  This version of the project
            (01) has the accession number NZ_CAAKNL010000000, and consists of
            sequences CAAKNL010000001-CAAKNL010000103.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_901212355.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:15:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,475
            CDSs (total)                      :: 4,332
            Genes (coding)                    :: 4,284
            CDSs (with protein)               :: 4,284
            Genes (RNA)                       :: 143
            rRNAs                             :: 8, 8, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 1 (5S, 16S)
            partial rRNAs                     :: 7, 7 (16S, 23S)
            tRNAs                             :: 115
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 48
            CDSs (without protein)            :: 48
            Pseudo Genes (ambiguous residues) :: 0 of 48
            Pseudo Genes (frameshifted)       :: 18 of 48
            Pseudo Genes (incomplete)         :: 33 of 48
            Pseudo Genes (internal stop)      :: 11 of 48
            Pseudo Genes (multiple problems)  :: 12 of 48
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4740061
                     /organism="Aeromonas veronii"
                     /mol_type="genomic DNA"
                     /isolate="KLG5"
                     /isolation_source="River Don"
                     /db_xref="taxon:654"
WGS         CAAKNL010000001-CAAKNL010000103
WGS_SCAFLD  NZ_CAAKNL010000001-NZ_CAAKNL010000103
//
LOCUS       NZ_WSFR01000000      4608737 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Aeromonas veronii strain B44, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WSFR00000000
VERSION     NZ_WSFR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13514135
            Assembly: GCF_009765635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas veronii (Aeromonas ichthiosmia)
  ORGANISM  Aeromonas veronii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (bases 1 to 4608737)
  AUTHORS   Kato,R.B., Miranda,F.M., Seyffert,N., Castro,T.P., Souza,R.S.,
            Gomide,A.P., Gouveia,G.V., Gouveia,J.S., Azevedo,V.C., Costa,M. and
            Ramos,R.J.
  TITLE     Comparative genome analysis of Aeromonas from aquatic organisms and
            environment in northestern Brazil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4608737)
  AUTHORS   Kato,R.B., Miranda,F.M., Seyffert,N., Castro,T.P., Souza,R.S.,
            Gomide,A.P., Gouveia,G.V., Gouveia,J.S., Azevedo,V.C., Costa,M. and
            Ramos,R.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-DEC-2019) Department of Genetics, Ecology, and
            Evolution, UFMG, Av Antonio Carlos 6627, Pampulha, Belo Horizonte,
            Minhas Gerais 31270-901, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WSFR00000000.1.
            The Aeromonas veronii whole genome shotgun (WGS) project has the
            project accession NZ_WSFR00000000.  This version of the project
            (01) has the accession number NZ_WSFR01000000, and consists of
            sequences WSFR01000001-WSFR01000051.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.0; Edena v. 3.131028
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110.0x
            Sequencing Technology  :: Illumina HiSeq; Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009765635.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:37:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,302
            CDSs (total)                      :: 4,163
            Genes (coding)                    :: 4,112
            CDSs (with protein)               :: 4,112
            Genes (RNA)                       :: 139
            rRNAs                             :: 11, 9, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 2, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 7, 3 (5S, 16S, 23S)
            tRNAs                             :: 111
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 25 of 51
            Pseudo Genes (incomplete)         :: 36 of 51
            Pseudo Genes (internal stop)      :: 8 of 51
            Pseudo Genes (multiple problems)  :: 13 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4608737
                     /organism="Aeromonas veronii"
                     /mol_type="genomic DNA"
                     /strain="B44"
                     /isolation_source="aquaculture system"
                     /host="Pseudoplatystoma corruscans"
                     /db_xref="taxon:654"
                     /geo_loc_name="Brazil: Petrolina"
                     /lat_lon="9.388961 S 40.503111 W"
                     /collection_date="2009-08"
WGS         WSFR01000001-WSFR01000051
WGS_SCAFLD  NZ_WSFR01000001-NZ_WSFR01000051
//
LOCUS       NZ_CAYSYS010000000   4005103 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter pittii strain Aci00951 isolate Aci00951, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CAYSYS000000000
VERSION     NZ_CAYSYS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117477650
            Assembly: GCF_964435325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter pittii
  ORGANISM  Acinetobacter pittii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 4005103)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2024) Universitaetsklinikum Freiburg, Institute
            for infection prevention and control, Breisacher Strasse 115B,
            79106 Freiburg, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAYSYS000000000.1.
            The Acinetobacter pittii whole genome shotgun (WGS) project has the
            project accession NZ_CAYSYS000000000.  This version of the project
            (01) has the accession number NZ_CAYSYS010000000, and consists of
            sequences CAYSYS010000001-CAYSYS010000054.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964435325.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:34:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,909
            CDSs (total)                      :: 3,834
            Genes (coding)                    :: 3,711
            CDSs (with protein)               :: 3,711
            Genes (RNA)                       :: 75
            rRNAs                             :: 6, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5 (5S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 34 of 123
            Pseudo Genes (incomplete)         :: 82 of 123
            Pseudo Genes (internal stop)      :: 27 of 123
            Pseudo Genes (multiple problems)  :: 16 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4005103
                     /organism="Acinetobacter pittii"
                     /mol_type="genomic DNA"
                     /strain="Aci00951"
                     /isolate="Aci00951"
                     /host="Homo sapiens"
                     /db_xref="taxon:48296"
                     /geo_loc_name="Germany"
                     /lat_lon="47.99 N 7.84 E"
WGS         CAYSYS010000001-CAYSYS010000054
WGS_SCAFLD  NZ_CAYSYS010000001-NZ_CAYSYS010000054
//
LOCUS       NZ_CABMOA010000000   4477475 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Aeromonas caviae isolate MGYG-HGUT-02527, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CABMOA000000000
VERSION     NZ_CABMOA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5852032
            Assembly: GCF_902388085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas caviae
  ORGANISM  Aeromonas caviae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1
  CONSRTM   EMBL-EBI Metagenomics Team
  TITLE     Direct Submission
  JOURNAL   Submitted (07-AUG-2019) EMG, The European Bioinformatics Institute
            (EMBL-EBI), Wellcome Genome Campus, CB10 1SD, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CABMOA000000000.1.
            The Aeromonas caviae whole genome shotgun (WGS) project has the
            project accession NZ_CABMOA000000000.  This version of the project
            (01) has the accession number NZ_CABMOA010000000, and consists of
            sequences CABMOA010000001-CABMOA010000034.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_902388085.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:18:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,174
            CDSs (total)                      :: 4,058
            Genes (coding)                    :: 4,030
            CDSs (with protein)               :: 4,030
            Genes (RNA)                       :: 116
            rRNAs                             :: 9, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 1 (5S, 16S, 23S)
            tRNAs                             :: 97
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 8 of 28
            Pseudo Genes (incomplete)         :: 20 of 28
            Pseudo Genes (internal stop)      :: 4 of 28
            Pseudo Genes (multiple problems)  :: 4 of 28
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4477475
                     /organism="Aeromonas caviae"
                     /mol_type="genomic DNA"
                     /isolate="MGYG-HGUT-02527"
                     /isolation_source="human gut"
                     /db_xref="taxon:648"
WGS         CABMOA010000001-CABMOA010000034
WGS_SCAFLD  NZ_CABMOA010000001-NZ_CABMOA010000034
//
LOCUS       NZ_VAGG01000000      3953292 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter baumannii strain Aci00862 isolate Aci00862, whole
            genome shotgun sequencing project.
ACCESSION   NZ_VAGG00000000
VERSION     NZ_VAGG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5396103
            Assembly: GCF_005819625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 3953292)
  AUTHORS   Eigenbrod,T., Reuter,S., Gross,A., Kocer,K., Guenther,F.,
            Zimmermann,S., Heeg,K., Mutters,N.T. and Nurjadi,D.
  TITLE     Molecular characterization of carbapenem-resistant Acinetobacter
            baumannii using whole-genome sequencing revealed missed
            transmission events, Germany, 2012-2015
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3953292)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-MAY-2019) Institute for Infection Prevention and
            Hospital Epidemiology, Medical Center University of Freiburg,
            Breisacher Strasse 115B, Freiburg 79106, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAGG00000000.1.
            The Acinetobacter baumannii whole genome shotgun (WGS) project has
            the project accession NZ_VAGG00000000.  This version of the project
            (01) has the accession number NZ_VAGG01000000, and consists of
            sequences VAGG01000001-VAGG01000103.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 135x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005819625.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:58:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,841
            CDSs (total)                      :: 3,763
            Genes (coding)                    :: 3,663
            CDSs (with protein)               :: 3,663
            Genes (RNA)                       :: 78
            rRNAs                             :: 4, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 21 of 100
            Pseudo Genes (incomplete)         :: 76 of 100
            Pseudo Genes (internal stop)      :: 12 of 100
            Pseudo Genes (multiple problems)  :: 8 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3953292
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="Aci00862"
                     /isolate="Aci00862"
                     /isolation_source="tracheal secretion"
                     /host="Homo sapiens"
                     /bio_material="tracheal secretion"
                     /db_xref="taxon:470"
                     /geo_loc_name="Germany"
                     /lat_lon="49.398750 N 8.672434 E"
                     /collection_date="2013-04-29"
WGS         VAGG01000001-VAGG01000103
WGS_SCAFLD  NZ_VAGG01000001-NZ_VAGG01000103
//
LOCUS       NZ_VZQB01000000      4350648 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Aeromonas caviae strain D, whole genome shotgun sequencing project.
ACCESSION   NZ_VZQB00000000
VERSION     NZ_VZQB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12777809
            Assembly: GCF_008802295.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas caviae
  ORGANISM  Aeromonas caviae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (bases 1 to 4350648)
  AUTHORS   Mann,B.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-SEP-2019) Unit for Environmental Science and
            Management, North West University, Hoffman str 11, Potchefstroom,
            North-West 5002, South Africa
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VZQB00000000.1.
            The Aeromonas caviae whole genome shotgun (WGS) project has the
            project accession NZ_VZQB00000000.  This version of the project
            (01) has the accession number NZ_VZQB01000000, and consists of
            sequences VZQB01000001-VZQB01000107.
            Bacteria and source DNA available from NWU, Dr JJ Bezuidenhout.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 170.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_008802295.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:18:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,120
            CDSs (total)                      :: 3,974
            Genes (coding)                    :: 3,919
            CDSs (with protein)               :: 3,919
            Genes (RNA)                       :: 146
            rRNAs                             :: 8, 11, 11 (5S, 16S, 23S)
            complete rRNAs                    :: 6 (5S)
            partial rRNAs                     :: 2, 11, 11 (5S, 16S, 23S)
            tRNAs                             :: 110
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 55
            CDSs (without protein)            :: 55
            Pseudo Genes (ambiguous residues) :: 0 of 55
            Pseudo Genes (frameshifted)       :: 8 of 55
            Pseudo Genes (incomplete)         :: 50 of 55
            Pseudo Genes (internal stop)      :: 0 of 55
            Pseudo Genes (multiple problems)  :: 3 of 55
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4350648
                     /organism="Aeromonas caviae"
                     /mol_type="genomic DNA"
                     /strain="D"
                     /isolation_source="water"
                     /db_xref="taxon:648"
                     /geo_loc_name="South Africa: North-West"
                     /lat_lon="26.7145 S 27.0970 E"
                     /collection_date="2017"
                     /collected_by="BC Mann"
WGS         VZQB01000001-VZQB01000107
WGS_SCAFLD  NZ_VZQB01000001-NZ_VZQB01000107
//
LOCUS       NZ_VAFS01000000      3924474 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter baumannii strain Aci00834 isolate Aci00834, whole
            genome shotgun sequencing project.
ACCESSION   NZ_VAFS00000000
VERSION     NZ_VAFS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5396089
            Assembly: GCF_005819735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 3924474)
  AUTHORS   Eigenbrod,T., Reuter,S., Gross,A., Kocer,K., Guenther,F.,
            Zimmermann,S., Heeg,K., Mutters,N.T. and Nurjadi,D.
  TITLE     Molecular characterization of carbapenem-resistant Acinetobacter
            baumannii using whole-genome sequencing revealed missed
            transmission events, Germany, 2012-2015
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3924474)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-MAY-2019) Institute for Infection Prevention and
            Hospital Epidemiology, Medical Center University of Freiburg,
            Breisacher Strasse 115B, Freiburg 79106, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAFS00000000.1.
            The Acinetobacter baumannii whole genome shotgun (WGS) project has
            the project accession NZ_VAFS00000000.  This version of the project
            (01) has the accession number NZ_VAFS01000000, and consists of
            sequences VAFS01000001-VAFS01000135.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 218x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005819735.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:59:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,821
            CDSs (total)                      :: 3,748
            Genes (coding)                    :: 3,645
            CDSs (with protein)               :: 3,645
            Genes (RNA)                       :: 73
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 63
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 103
            CDSs (without protein)            :: 103
            Pseudo Genes (ambiguous residues) :: 0 of 103
            Pseudo Genes (frameshifted)       :: 26 of 103
            Pseudo Genes (incomplete)         :: 74 of 103
            Pseudo Genes (internal stop)      :: 16 of 103
            Pseudo Genes (multiple problems)  :: 13 of 103
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3924474
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="Aci00834"
                     /isolate="Aci00834"
                     /isolation_source="clinical material"
                     /host="Homo sapiens"
                     /bio_material="clinical material"
                     /db_xref="taxon:470"
                     /geo_loc_name="Germany"
                     /lat_lon="49.398750 N 8.672434 E"
                     /collection_date="2013-05-28"
WGS         VAFS01000001-VAFS01000135
WGS_SCAFLD  NZ_VAFS01000001-NZ_VAFS01000135
//
LOCUS       NZ_CAAKNI010000000   4737922 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Aeromonas caviae isolate Sch3N, whole genome shotgun sequencing
            project.
ACCESSION   NZ_CAAKNI000000000
VERSION     NZ_CAAKNI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5282776
            Assembly: GCF_901212305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas caviae
  ORGANISM  Aeromonas caviae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1
  AUTHORS   Green R,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-APR-2019) UNIVERSITY OF SHEFFIELD, University of
            Sheffield Medical School, Beech Hill Rd, Sheffield, S10 2RX, United
            Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAAKNI000000000.1.
            The Aeromonas caviae whole genome shotgun (WGS) project has the
            project accession NZ_CAAKNI000000000.  This version of the project
            (01) has the accession number NZ_CAAKNI010000000, and consists of
            sequences CAAKNI010000001-CAAKNI010000192.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_901212305.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:13:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,578
            CDSs (total)                      :: 4,440
            Genes (coding)                    :: 4,372
            CDSs (with protein)               :: 4,372
            Genes (RNA)                       :: 138
            rRNAs                             :: 6, 5, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 4, 5 (5S, 16S, 23S)
            tRNAs                             :: 113
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 13 of 68
            Pseudo Genes (incomplete)         :: 55 of 68
            Pseudo Genes (internal stop)      :: 6 of 68
            Pseudo Genes (multiple problems)  :: 5 of 68
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4737922
                     /organism="Aeromonas caviae"
                     /mol_type="genomic DNA"
                     /isolate="Sch3N"
                     /isolation_source="Gastroenteritis patient"
                     /db_xref="taxon:648"
WGS         CAAKNI010000001-CAAKNI010000192
WGS_SCAFLD  NZ_CAAKNI010000001-NZ_CAAKNI010000192
//
LOCUS       NZ_VAFX01000000      3949083 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter baumannii strain Aci00847 isolate Aci00847, whole
            genome shotgun sequencing project.
ACCESSION   NZ_VAFX00000000
VERSION     NZ_VAFX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5396094
            Assembly: GCF_005819755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 3949083)
  AUTHORS   Eigenbrod,T., Reuter,S., Gross,A., Kocer,K., Guenther,F.,
            Zimmermann,S., Heeg,K., Mutters,N.T. and Nurjadi,D.
  TITLE     Molecular characterization of carbapenem-resistant Acinetobacter
            baumannii using whole-genome sequencing revealed missed
            transmission events, Germany, 2012-2015
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3949083)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAY-2019) Institute for Infection Prevention and
            Hospital Epidemiology, Medical Center University of Freiburg,
            Breisacher Strasse 115B, Freiburg 79106, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAFX00000000.1.
            The Acinetobacter baumannii whole genome shotgun (WGS) project has
            the project accession NZ_VAFX00000000.  This version of the project
            (01) has the accession number NZ_VAFX01000000, and consists of
            sequences VAFX01000001-VAFX01000155.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 133x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005819755.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:00:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,878
            CDSs (total)                      :: 3,800
            Genes (coding)                    :: 3,708
            CDSs (with protein)               :: 3,708
            Genes (RNA)                       :: 78
            rRNAs                             :: 4, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 16 of 92
            Pseudo Genes (incomplete)         :: 65 of 92
            Pseudo Genes (internal stop)      :: 14 of 92
            Pseudo Genes (multiple problems)  :: 3 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3949083
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="Aci00847"
                     /isolate="Aci00847"
                     /isolation_source="clinical material"
                     /host="Homo sapiens"
                     /bio_material="clinical material"
                     /db_xref="taxon:470"
                     /geo_loc_name="Germany"
                     /lat_lon="49.398750 N 8.672434 E"
                     /collection_date="2012/2015"
WGS         VAFX01000001-VAFX01000155
WGS_SCAFLD  NZ_VAFX01000001-NZ_VAFX01000155
//
LOCUS       NZ_VAGR01000000      3952743 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter baumannii strain Aci00856 isolate Aci00856, whole
            genome shotgun sequencing project.
ACCESSION   NZ_VAGR00000000
VERSION     NZ_VAGR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5396114
            Assembly: GCF_005819175.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 3952743)
  AUTHORS   Eigenbrod,T., Reuter,S., Gross,A., Kocer,K., Guenther,F.,
            Zimmermann,S., Heeg,K., Mutters,N.T. and Nurjadi,D.
  TITLE     Molecular characterization of carbapenem-resistant Acinetobacter
            baumannii using whole-genome sequencing revealed missed
            transmission events, Germany, 2012-2015
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3952743)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAY-2019) Institute for Infection Prevention and
            Hospital Epidemiology, Medical Center University of Freiburg,
            Breisacher Strasse 115B, Freiburg 79106, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAGR00000000.1.
            The Acinetobacter baumannii whole genome shotgun (WGS) project has
            the project accession NZ_VAGR00000000.  This version of the project
            (01) has the accession number NZ_VAGR01000000, and consists of
            sequences VAGR01000001-VAGR01000061.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 108x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005819175.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:49:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,841
            CDSs (total)                      :: 3,762
            Genes (coding)                    :: 3,688
            CDSs (with protein)               :: 3,688
            Genes (RNA)                       :: 79
            rRNAs                             :: 6, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 4, 1, 3 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 74
            CDSs (without protein)            :: 74
            Pseudo Genes (ambiguous residues) :: 0 of 74
            Pseudo Genes (frameshifted)       :: 16 of 74
            Pseudo Genes (incomplete)         :: 48 of 74
            Pseudo Genes (internal stop)      :: 13 of 74
            Pseudo Genes (multiple problems)  :: 3 of 74
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3952743
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="Aci00856"
                     /isolate="Aci00856"
                     /isolation_source="wound swab"
                     /host="Homo sapiens"
                     /bio_material="wound swab"
                     /db_xref="taxon:470"
                     /geo_loc_name="Germany"
                     /lat_lon="49.398750 N 8.672434 E"
                     /collection_date="2015-07-13"
WGS         VAGR01000001-VAGR01000061
WGS_SCAFLD  NZ_VAGR01000001-NZ_VAGR01000061
//
LOCUS       NZ_CAYSYE010000000   4007776 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter pittii strain Aci00959 isolate Aci00959, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CAYSYE000000000
VERSION     NZ_CAYSYE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117477651
            Assembly: GCF_964435225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter pittii
  ORGANISM  Acinetobacter pittii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 4007776)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2024) Universitaetsklinikum Freiburg, Institute
            for infection prevention and control, Breisacher Strasse 115B,
            79106 Freiburg, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAYSYE000000000.1.
            The Acinetobacter pittii whole genome shotgun (WGS) project has the
            project accession NZ_CAYSYE000000000.  This version of the project
            (01) has the accession number NZ_CAYSYE010000000, and consists of
            sequences CAYSYE010000001-CAYSYE010000106.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964435225.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:39:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,007
            CDSs (total)                      :: 3,928
            Genes (coding)                    :: 3,747
            CDSs (with protein)               :: 3,747
            Genes (RNA)                       :: 79
            rRNAs                             :: 6, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5, 1 (5S, 16S)
            tRNAs                             :: 66
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 181
            CDSs (without protein)            :: 181
            Pseudo Genes (ambiguous residues) :: 0 of 181
            Pseudo Genes (frameshifted)       :: 47 of 181
            Pseudo Genes (incomplete)         :: 134 of 181
            Pseudo Genes (internal stop)      :: 22 of 181
            Pseudo Genes (multiple problems)  :: 19 of 181
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4007776
                     /organism="Acinetobacter pittii"
                     /mol_type="genomic DNA"
                     /strain="Aci00959"
                     /isolate="Aci00959"
                     /host="Homo sapiens"
                     /db_xref="taxon:48296"
                     /geo_loc_name="Germany"
                     /lat_lon="47.99 N 7.84 E"
WGS         CAYSYE010000001-CAYSYE010000106
WGS_SCAFLD  NZ_CAYSYE010000001-NZ_CAYSYE010000106
//
LOCUS       NZ_VAGF01000000      4105181 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter baumannii strain Aci00860 isolate Aci00860, whole
            genome shotgun sequencing project.
ACCESSION   NZ_VAGF00000000
VERSION     NZ_VAGF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5396102
            Assembly: GCF_005819365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 4105181)
  AUTHORS   Eigenbrod,T., Reuter,S., Gross,A., Kocer,K., Guenther,F.,
            Zimmermann,S., Heeg,K., Mutters,N.T. and Nurjadi,D.
  TITLE     Molecular characterization of carbapenem-resistant Acinetobacter
            baumannii using whole-genome sequencing revealed missed
            transmission events, Germany, 2012-2015
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4105181)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-MAY-2019) Institute for Infection Prevention and
            Hospital Epidemiology, Medical Center University of Freiburg,
            Breisacher Strasse 115B, Freiburg 79106, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAGF00000000.1.
            The Acinetobacter baumannii whole genome shotgun (WGS) project has
            the project accession NZ_VAGF00000000.  This version of the project
            (01) has the accession number NZ_VAGF01000000, and consists of
            sequences VAGF01000001-VAGF01000105.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 92x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005819365.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:01:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,046
            CDSs (total)                      :: 3,973
            Genes (coding)                    :: 3,842
            CDSs (with protein)               :: 3,842
            Genes (RNA)                       :: 73
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 131
            CDSs (without protein)            :: 131
            Pseudo Genes (ambiguous residues) :: 0 of 131
            Pseudo Genes (frameshifted)       :: 44 of 131
            Pseudo Genes (incomplete)         :: 77 of 131
            Pseudo Genes (internal stop)      :: 24 of 131
            Pseudo Genes (multiple problems)  :: 12 of 131
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4105181
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="Aci00860"
                     /isolate="Aci00860"
                     /isolation_source="tracheal secretion"
                     /host="Homo sapiens"
                     /bio_material="tracheal secretion"
                     /db_xref="taxon:470"
                     /geo_loc_name="Germany"
                     /lat_lon="49.398750 N 8.672434 E"
                     /collection_date="2013-05-02"
WGS         VAGF01000001-VAGF01000105
WGS_SCAFLD  NZ_VAGF01000001-NZ_VAGF01000105
//
LOCUS       NZ_VAGJ01000000      4040321 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter baumannii strain Aci00866 isolate Aci00866, whole
            genome shotgun sequencing project.
ACCESSION   NZ_VAGJ00000000
VERSION     NZ_VAGJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5396106
            Assembly: GCF_005819315.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 4040321)
  AUTHORS   Eigenbrod,T., Reuter,S., Gross,A., Kocer,K., Guenther,F.,
            Zimmermann,S., Heeg,K., Mutters,N.T. and Nurjadi,D.
  TITLE     Molecular characterization of carbapenem-resistant Acinetobacter
            baumannii using whole-genome sequencing revealed missed
            transmission events, Germany, 2012-2015
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4040321)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-MAY-2019) Institute for Infection Prevention and
            Hospital Epidemiology, Medical Center University of Freiburg,
            Breisacher Strasse 115B, Freiburg 79106, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAGJ00000000.1.
            The Acinetobacter baumannii whole genome shotgun (WGS) project has
            the project accession NZ_VAGJ00000000.  This version of the project
            (01) has the accession number NZ_VAGJ01000000, and consists of
            sequences VAGJ01000001-VAGJ01000098.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 115x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005819315.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:43:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,986
            CDSs (total)                      :: 3,913
            Genes (coding)                    :: 3,789
            CDSs (with protein)               :: 3,789
            Genes (RNA)                       :: 73
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 124
            CDSs (without protein)            :: 124
            Pseudo Genes (ambiguous residues) :: 0 of 124
            Pseudo Genes (frameshifted)       :: 44 of 124
            Pseudo Genes (incomplete)         :: 70 of 124
            Pseudo Genes (internal stop)      :: 25 of 124
            Pseudo Genes (multiple problems)  :: 13 of 124
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4040321
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="Aci00866"
                     /isolate="Aci00866"
                     /isolation_source="perianal swab"
                     /host="Homo sapiens"
                     /bio_material="perianal swab"
                     /db_xref="taxon:470"
                     /geo_loc_name="Germany"
                     /lat_lon="49.398750 N 8.672434 E"
                     /collection_date="2013-10-06"
WGS         VAGJ01000001-VAGJ01000098
WGS_SCAFLD  NZ_VAGJ01000001-NZ_VAGJ01000098
//
LOCUS       NZ_VAFY01000000      4043940 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter baumannii strain Aci00848 isolate Aci00848, whole
            genome shotgun sequencing project.
ACCESSION   NZ_VAFY00000000
VERSION     NZ_VAFY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5396095
            Assembly: GCF_005819475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 4043940)
  AUTHORS   Eigenbrod,T., Reuter,S., Gross,A., Kocer,K., Guenther,F.,
            Zimmermann,S., Heeg,K., Mutters,N.T. and Nurjadi,D.
  TITLE     Molecular characterization of carbapenem-resistant Acinetobacter
            baumannii using whole-genome sequencing revealed missed
            transmission events, Germany, 2012-2015
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4043940)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-MAY-2019) Institute for Infection Prevention and
            Hospital Epidemiology, Medical Center University of Freiburg,
            Breisacher Strasse 115B, Freiburg 79106, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAFY00000000.1.
            The Acinetobacter baumannii whole genome shotgun (WGS) project has
            the project accession NZ_VAFY00000000.  This version of the project
            (01) has the accession number NZ_VAFY01000000, and consists of
            sequences VAFY01000001-VAFY01000133.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 155x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005819475.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:58:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,001
            CDSs (total)                      :: 3,926
            Genes (coding)                    :: 3,798
            CDSs (with protein)               :: 3,798
            Genes (RNA)                       :: 75
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 1 (5S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 43 of 128
            Pseudo Genes (incomplete)         :: 75 of 128
            Pseudo Genes (internal stop)      :: 25 of 128
            Pseudo Genes (multiple problems)  :: 13 of 128
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4043940
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="Aci00848"
                     /isolate="Aci00848"
                     /isolation_source="rectal swab"
                     /host="Homo sapiens"
                     /bio_material="rectal swab"
                     /db_xref="taxon:470"
                     /geo_loc_name="Germany"
                     /lat_lon="49.398750 N 8.672434 E"
                     /collection_date="2013-10-11"
WGS         VAFY01000001-VAFY01000133
WGS_SCAFLD  NZ_VAFY01000001-NZ_VAFY01000133
//
LOCUS       NZ_VAFW01000000      4303423 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter baumannii strain Aci00844 isolate Aci00844, whole
            genome shotgun sequencing project.
ACCESSION   NZ_VAFW00000000
VERSION     NZ_VAFW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5396093
            Assembly: GCF_005819725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 4303423)
  AUTHORS   Eigenbrod,T., Reuter,S., Gross,A., Kocer,K., Guenther,F.,
            Zimmermann,S., Heeg,K., Mutters,N.T. and Nurjadi,D.
  TITLE     Molecular characterization of carbapenem-resistant Acinetobacter
            baumannii using whole-genome sequencing revealed missed
            transmission events, Germany, 2012-2015
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4303423)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAY-2019) Institute for Infection Prevention and
            Hospital Epidemiology, Medical Center University of Freiburg,
            Breisacher Strasse 115B, Freiburg 79106, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAFW00000000.1.
            The Acinetobacter baumannii whole genome shotgun (WGS) project has
            the project accession NZ_VAFW00000000.  This version of the project
            (01) has the accession number NZ_VAFW01000000, and consists of
            sequences VAFW01000001-VAFW01000435.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 147x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005819725.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:09:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,425
            CDSs (total)                      :: 4,345
            Genes (coding)                    :: 4,168
            CDSs (with protein)               :: 4,168
            Genes (RNA)                       :: 80
            rRNAs                             :: 4, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 177
            CDSs (without protein)            :: 177
            Pseudo Genes (ambiguous residues) :: 0 of 177
            Pseudo Genes (frameshifted)       :: 18 of 177
            Pseudo Genes (incomplete)         :: 146 of 177
            Pseudo Genes (internal stop)      :: 16 of 177
            Pseudo Genes (multiple problems)  :: 3 of 177
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4303423
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="Aci00844"
                     /isolate="Aci00844"
                     /isolation_source="rectal swab"
                     /host="Homo sapiens"
                     /bio_material="rectal swab"
                     /db_xref="taxon:470"
                     /geo_loc_name="Germany"
                     /lat_lon="49.398750 N 8.672434 E"
                     /collection_date="2015-05-12"
WGS         VAFW01000001-VAFW01000435
WGS_SCAFLD  NZ_VAFW01000001-NZ_VAFW01000435
//
LOCUS       NZ_VAGQ01000000      4011437 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter baumannii strain Aci00838 isolate Aci00838, whole
            genome shotgun sequencing project.
ACCESSION   NZ_VAGQ00000000
VERSION     NZ_VAGQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5396113
            Assembly: GCF_005819165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 4011437)
  AUTHORS   Eigenbrod,T., Reuter,S., Gross,A., Kocer,K., Guenther,F.,
            Zimmermann,S., Heeg,K., Mutters,N.T. and Nurjadi,D.
  TITLE     Molecular characterization of carbapenem-resistant Acinetobacter
            baumannii using whole-genome sequencing revealed missed
            transmission events, Germany, 2012-2015
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4011437)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAY-2019) Institute for Infection Prevention and
            Hospital Epidemiology, Medical Center University of Freiburg,
            Breisacher Strasse 115B, Freiburg 79106, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAGQ00000000.1.
            The Acinetobacter baumannii whole genome shotgun (WGS) project has
            the project accession NZ_VAGQ00000000.  This version of the project
            (01) has the accession number NZ_VAGQ01000000, and consists of
            sequences VAGQ01000001-VAGQ01000098.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 70x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005819165.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:41:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,924
            CDSs (total)                      :: 3,844
            Genes (coding)                    :: 3,761
            CDSs (with protein)               :: 3,761
            Genes (RNA)                       :: 80
            rRNAs                             :: 5, 2, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 4, 1, 6 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 83
            CDSs (without protein)            :: 83
            Pseudo Genes (ambiguous residues) :: 0 of 83
            Pseudo Genes (frameshifted)       :: 16 of 83
            Pseudo Genes (incomplete)         :: 61 of 83
            Pseudo Genes (internal stop)      :: 10 of 83
            Pseudo Genes (multiple problems)  :: 4 of 83
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4011437
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="Aci00838"
                     /isolate="Aci00838"
                     /isolation_source="groin swab"
                     /host="Homo sapiens"
                     /bio_material="groin swab"
                     /db_xref="taxon:470"
                     /geo_loc_name="Germany"
                     /lat_lon="49.398750 N 8.672434 E"
                     /collection_date="2014-03-08"
WGS         VAGQ01000001-VAGQ01000098
WGS_SCAFLD  NZ_VAGQ01000001-NZ_VAGQ01000098
//
LOCUS       NZ_VAFZ01000000      4342792 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter baumannii strain Aci00849 isolate Aci00849, whole
            genome shotgun sequencing project.
ACCESSION   NZ_VAFZ00000000
VERSION     NZ_VAFZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5396096
            Assembly: GCF_005819425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 4342792)
  AUTHORS   Eigenbrod,T., Reuter,S., Gross,A., Kocer,K., Guenther,F.,
            Zimmermann,S., Heeg,K., Mutters,N.T. and Nurjadi,D.
  TITLE     Molecular characterization of carbapenem-resistant Acinetobacter
            baumannii using whole-genome sequencing revealed missed
            transmission events, Germany, 2012-2015
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4342792)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-MAY-2019) Institute for Infection Prevention and
            Hospital Epidemiology, Medical Center University of Freiburg,
            Breisacher Strasse 115B, Freiburg 79106, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAFZ00000000.1.
            The Acinetobacter baumannii whole genome shotgun (WGS) project has
            the project accession NZ_VAFZ00000000.  This version of the project
            (01) has the accession number NZ_VAFZ01000000, and consists of
            sequences VAFZ01000001-VAFZ01000245.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 154x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005819425.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:03:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,404
            CDSs (total)                      :: 4,324
            Genes (coding)                    :: 4,144
            CDSs (with protein)               :: 4,144
            Genes (RNA)                       :: 80
            rRNAs                             :: 4, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 3, 2, 1 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 180
            CDSs (without protein)            :: 180
            Pseudo Genes (ambiguous residues) :: 0 of 180
            Pseudo Genes (frameshifted)       :: 22 of 180
            Pseudo Genes (incomplete)         :: 147 of 180
            Pseudo Genes (internal stop)      :: 20 of 180
            Pseudo Genes (multiple problems)  :: 8 of 180
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4342792
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="Aci00849"
                     /isolate="Aci00849"
                     /isolation_source="wound swab"
                     /host="Homo sapiens"
                     /bio_material="wound swab"
                     /db_xref="taxon:470"
                     /geo_loc_name="Germany"
                     /lat_lon="49.398750 N 8.672434 E"
                     /collection_date="2014-10-02"
WGS         VAFZ01000001-VAFZ01000245
WGS_SCAFLD  NZ_VAFZ01000001-NZ_VAFZ01000245
//
LOCUS       NZ_VAFQ01000000      3895608 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter baumannii strain Aci00835 isolate Aci00835, whole
            genome shotgun sequencing project.
ACCESSION   NZ_VAFQ00000000
VERSION     NZ_VAFQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5396087
            Assembly: GCF_005819765.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 3895608)
  AUTHORS   Eigenbrod,T., Reuter,S., Gross,A., Kocer,K., Guenther,F.,
            Zimmermann,S., Heeg,K., Mutters,N.T. and Nurjadi,D.
  TITLE     Molecular characterization of carbapenem-resistant Acinetobacter
            baumannii using whole-genome sequencing revealed missed
            transmission events, Germany, 2012-2015
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3895608)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAY-2019) Institute for Infection Prevention and
            Hospital Epidemiology, Medical Center University of Freiburg,
            Breisacher Strasse 115B, Freiburg 79106, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAFQ00000000.1.
            The Acinetobacter baumannii whole genome shotgun (WGS) project has
            the project accession NZ_VAFQ00000000.  This version of the project
            (01) has the accession number NZ_VAFQ01000000, and consists of
            sequences VAFQ01000001-VAFQ01000117.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 203x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005819765.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:01:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,780
            CDSs (total)                      :: 3,701
            Genes (coding)                    :: 3,621
            CDSs (with protein)               :: 3,621
            Genes (RNA)                       :: 79
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 80
            CDSs (without protein)            :: 80
            Pseudo Genes (ambiguous residues) :: 0 of 80
            Pseudo Genes (frameshifted)       :: 17 of 80
            Pseudo Genes (incomplete)         :: 52 of 80
            Pseudo Genes (internal stop)      :: 15 of 80
            Pseudo Genes (multiple problems)  :: 4 of 80
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3895608
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="Aci00835"
                     /isolate="Aci00835"
                     /isolation_source="rectal swab"
                     /host="Homo sapiens"
                     /bio_material="rectal swab"
                     /db_xref="taxon:470"
                     /geo_loc_name="Germany"
                     /lat_lon="49.398750 N 8.672434 E"
                     /collection_date="2013-03-14"
WGS         VAFQ01000001-VAFQ01000117
WGS_SCAFLD  NZ_VAFQ01000001-NZ_VAFQ01000117
//
LOCUS       NZ_VAGS01000000      4001438 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter baumannii strain Aci00846 isolate Aci00846, whole
            genome shotgun sequencing project.
ACCESSION   NZ_VAGS00000000
VERSION     NZ_VAGS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5396115
            Assembly: GCF_005819135.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 4001438)
  AUTHORS   Eigenbrod,T., Reuter,S., Gross,A., Kocer,K., Guenther,F.,
            Zimmermann,S., Heeg,K., Mutters,N.T. and Nurjadi,D.
  TITLE     Molecular characterization of carbapenem-resistant Acinetobacter
            baumannii using whole-genome sequencing revealed missed
            transmission events, Germany, 2012-2015
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4001438)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAY-2019) Institute for Infection Prevention and
            Hospital Epidemiology, Medical Center University of Freiburg,
            Breisacher Strasse 115B, Freiburg 79106, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAGS00000000.1.
            The Acinetobacter baumannii whole genome shotgun (WGS) project has
            the project accession NZ_VAGS00000000.  This version of the project
            (01) has the accession number NZ_VAGS01000000, and consists of
            sequences VAGS01000001-VAGS01000077.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 107x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005819135.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:42:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,910
            CDSs (total)                      :: 3,832
            Genes (coding)                    :: 3,747
            CDSs (with protein)               :: 3,747
            Genes (RNA)                       :: 78
            rRNAs                             :: 4, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3, 1, 4 (5S, 16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 85
            CDSs (without protein)            :: 85
            Pseudo Genes (ambiguous residues) :: 0 of 85
            Pseudo Genes (frameshifted)       :: 15 of 85
            Pseudo Genes (incomplete)         :: 63 of 85
            Pseudo Genes (internal stop)      :: 10 of 85
            Pseudo Genes (multiple problems)  :: 3 of 85
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4001438
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="Aci00846"
                     /isolate="Aci00846"
                     /isolation_source="stoma swab"
                     /host="Homo sapiens"
                     /bio_material="stoma swab"
                     /db_xref="taxon:470"
                     /geo_loc_name="Germany"
                     /lat_lon="49.398750 N 8.672434 E"
                     /collection_date="2014-03-10"
WGS         VAGS01000001-VAGS01000077
WGS_SCAFLD  NZ_VAGS01000001-NZ_VAGS01000077
//
LOCUS       NZ_VAFT01000000      3855712 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter baumannii strain Aci00839 isolate Aci00839, whole
            genome shotgun sequencing project.
ACCESSION   NZ_VAFT00000000
VERSION     NZ_VAFT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5396090
            Assembly: GCF_005819545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 3855712)
  AUTHORS   Eigenbrod,T., Reuter,S., Gross,A., Kocer,K., Guenther,F.,
            Zimmermann,S., Heeg,K., Mutters,N.T. and Nurjadi,D.
  TITLE     Molecular characterization of carbapenem-resistant Acinetobacter
            baumannii using whole-genome sequencing revealed missed
            transmission events, Germany, 2012-2015
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3855712)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAY-2019) Institute for Infection Prevention and
            Hospital Epidemiology, Medical Center University of Freiburg,
            Breisacher Strasse 115B, Freiburg 79106, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAFT00000000.1.
            The Acinetobacter baumannii whole genome shotgun (WGS) project has
            the project accession NZ_VAFT00000000.  This version of the project
            (01) has the accession number NZ_VAFT01000000, and consists of
            sequences VAFT01000001-VAFT01000138.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 103x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005819545.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:08:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,725
            CDSs (total)                      :: 3,651
            Genes (coding)                    :: 3,563
            CDSs (with protein)               :: 3,563
            Genes (RNA)                       :: 74
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 88
            CDSs (without protein)            :: 88
            Pseudo Genes (ambiguous residues) :: 0 of 88
            Pseudo Genes (frameshifted)       :: 15 of 88
            Pseudo Genes (incomplete)         :: 61 of 88
            Pseudo Genes (internal stop)      :: 15 of 88
            Pseudo Genes (multiple problems)  :: 3 of 88
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3855712
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="Aci00839"
                     /isolate="Aci00839"
                     /isolation_source="rectal swab"
                     /host="Homo sapiens"
                     /bio_material="rectal swab"
                     /db_xref="taxon:470"
                     /geo_loc_name="Germany"
                     /lat_lon="49.398750 N 8.672434 E"
                     /collection_date="2015-02-10"
WGS         VAFT01000001-VAFT01000138
WGS_SCAFLD  NZ_VAFT01000001-NZ_VAFT01000138
//
LOCUS       NZ_VAGO01000000      4071590 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter baumannii strain Aci00872 isolate Aci00872, whole
            genome shotgun sequencing project.
ACCESSION   NZ_VAGO00000000
VERSION     NZ_VAGO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5396111
            Assembly: GCF_005819215.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 4071590)
  AUTHORS   Eigenbrod,T., Reuter,S., Gross,A., Kocer,K., Guenther,F.,
            Zimmermann,S., Heeg,K., Mutters,N.T. and Nurjadi,D.
  TITLE     Molecular characterization of carbapenem-resistant Acinetobacter
            baumannii using whole-genome sequencing revealed missed
            transmission events, Germany, 2012-2015
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4071590)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-MAY-2019) Institute for Infection Prevention and
            Hospital Epidemiology, Medical Center University of Freiburg,
            Breisacher Strasse 115B, Freiburg 79106, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAGO00000000.1.
            The Acinetobacter baumannii whole genome shotgun (WGS) project has
            the project accession NZ_VAGO00000000.  This version of the project
            (01) has the accession number NZ_VAGO01000000, and consists of
            sequences VAGO01000001-VAGO01000134.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 198x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005819215.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:03:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,971
            CDSs (total)                      :: 3,898
            Genes (coding)                    :: 3,759
            CDSs (with protein)               :: 3,759
            Genes (RNA)                       :: 73
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 1 (5S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 139
            CDSs (without protein)            :: 139
            Pseudo Genes (ambiguous residues) :: 0 of 139
            Pseudo Genes (frameshifted)       :: 34 of 139
            Pseudo Genes (incomplete)         :: 91 of 139
            Pseudo Genes (internal stop)      :: 28 of 139
            Pseudo Genes (multiple problems)  :: 14 of 139
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4071590
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="Aci00872"
                     /isolate="Aci00872"
                     /isolation_source="clinical material"
                     /host="Homo sapiens"
                     /bio_material="clinical material"
                     /db_xref="taxon:470"
                     /geo_loc_name="Germany"
                     /lat_lon="49.398750 N 8.672434 E"
                     /collection_date="2015-09-12"
WGS         VAGO01000001-VAGO01000134
WGS_SCAFLD  NZ_VAGO01000001-NZ_VAGO01000134
//
LOCUS       NZ_QFGM01000000      3324854 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter junii strain RS03, whole genome shotgun sequencing
            project.
ACCESSION   NZ_QFGM00000000
VERSION     NZ_QFGM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN08978049
            Assembly: GCF_004920505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter junii (Acinetobacter grimontii)
  ORGANISM  Acinetobacter junii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter.
REFERENCE   1  (bases 1 to 3324854)
  AUTHORS   Garner,E.
  TITLE     Whole genome sequence comparison of clinical and drinking water
            Legionella pneumophila isolates
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3324854)
  AUTHORS   Garner,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-APR-2018) Civil and Environmental Engineering,
            Virginia Polytechnic Institute and State University, 418 Durham
            Hall, 1145 Perry St, Blacksburg, VA 24060, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QFGM00000000.1.
            The Acinetobacter junii whole genome shotgun (WGS) project has the
            project accession NZ_QFGM00000000.  This version of the project
            (01) has the accession number NZ_QFGM01000000, and consists of
            sequences QFGM01000001-QFGM01000140.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.11
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004920505.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:11:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,250
            CDSs (total)                      :: 3,168
            Genes (coding)                    :: 2,978
            CDSs (with protein)               :: 2,978
            Genes (RNA)                       :: 82
            rRNAs                             :: 7, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 67
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 190
            CDSs (without protein)            :: 190
            Pseudo Genes (ambiguous residues) :: 0 of 190
            Pseudo Genes (frameshifted)       :: 43 of 190
            Pseudo Genes (incomplete)         :: 135 of 190
            Pseudo Genes (internal stop)      :: 32 of 190
            Pseudo Genes (multiple problems)  :: 19 of 190
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3324854
                     /organism="Acinetobacter junii"
                     /mol_type="genomic DNA"
                     /strain="RS03"
                     /isolation_source="Residence shower"
                     /db_xref="taxon:40215"
                     /geo_loc_name="USA: Michigan"
                     /collection_date="2016-06"
                     /collected_by="Virginia Polytechnic Institute and State
                     University"
WGS         QFGM01000001-QFGM01000140
WGS_SCAFLD  NZ_QFGM01000001-NZ_QFGM01000140
//
LOCUS       NZ_ADTA01000000      4384465 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis SHAN11, whole genome shotgun sequencing project.
ACCESSION   NZ_ADTA00000000
VERSION     NZ_ADTA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403100
            Assembly: GCF_000325325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis SHAN11
  ORGANISM  Yersinia pestis SHAN11
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4384465)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4384465)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADTA00000000.1.
            The Yersinia pestis SHAN11 whole genome shotgun (WGS) project has
            the project accession NZ_ADTA00000000.  This version of the project
            (01) has the accession number NZ_ADTA01000000, and consists of
            sequences ADTA01000001-ADTA01001173.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 56X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000325325.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:32:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,296
            CDSs (total)                      :: 4,263
            Genes (coding)                    :: 3,907
            CDSs (with protein)               :: 3,907
            Genes (RNA)                       :: 33
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1, 3 (5S, 23S)
            tRNAs                             :: 20
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 356
            CDSs (without protein)            :: 356
            Pseudo Genes (ambiguous residues) :: 0 of 356
            Pseudo Genes (frameshifted)       :: 84 of 356
            Pseudo Genes (incomplete)         :: 287 of 356
            Pseudo Genes (internal stop)      :: 20 of 356
            Pseudo Genes (multiple problems)  :: 32 of 356
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4384465
                     /organism="Yersinia pestis SHAN11"
                     /mol_type="genomic DNA"
                     /strain="SHAN11"
                     /db_xref="taxon:755965"
WGS         ADTA01000001-ADTA01001173
WGS_SCAFLD  NZ_ADTA01000001-NZ_ADTA01001173
//
LOCUS       NZ_VAGY01000000      3864068 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter baumannii strain Aci00861 isolate Aci00861, whole
            genome shotgun sequencing project.
ACCESSION   NZ_VAGY00000000
VERSION     NZ_VAGY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5396121
            Assembly: GCF_005819065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 3864068)
  AUTHORS   Eigenbrod,T., Reuter,S., Gross,A., Kocer,K., Guenther,F.,
            Zimmermann,S., Heeg,K., Mutters,N.T. and Nurjadi,D.
  TITLE     Molecular characterization of carbapenem-resistant Acinetobacter
            baumannii using whole-genome sequencing revealed missed
            transmission events, Germany, 2012-2015
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3864068)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAY-2019) Institute for Infection Prevention and
            Hospital Epidemiology, Medical Center University of Freiburg,
            Breisacher Strasse 115B, Freiburg 79106, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAGY00000000.1.
            The Acinetobacter baumannii whole genome shotgun (WGS) project has
            the project accession NZ_VAGY00000000.  This version of the project
            (01) has the accession number NZ_VAGY01000000, and consists of
            sequences VAGY01000001-VAGY01000055.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 77x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005819065.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:43:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,717
            CDSs (total)                      :: 3,640
            Genes (coding)                    :: 3,568
            CDSs (with protein)               :: 3,568
            Genes (RNA)                       :: 77
            rRNAs                             :: 4, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3, 1, 4 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 72
            CDSs (without protein)            :: 72
            Pseudo Genes (ambiguous residues) :: 0 of 72
            Pseudo Genes (frameshifted)       :: 15 of 72
            Pseudo Genes (incomplete)         :: 43 of 72
            Pseudo Genes (internal stop)      :: 17 of 72
            Pseudo Genes (multiple problems)  :: 3 of 72
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3864068
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="Aci00861"
                     /isolate="Aci00861"
                     /isolation_source="tracheal secretion"
                     /host="Homo sapiens"
                     /bio_material="tracheal secretion"
                     /db_xref="taxon:470"
                     /geo_loc_name="Germany"
                     /lat_lon="49.398750 N 8.672434 E"
                     /collection_date="2013-09-23"
WGS         VAGY01000001-VAGY01000055
WGS_SCAFLD  NZ_VAGY01000001-NZ_VAGY01000055
//
LOCUS       NZ_VAGL01000000      4105828 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter baumannii strain Aci00869 isolate Aci00869, whole
            genome shotgun sequencing project.
ACCESSION   NZ_VAGL00000000
VERSION     NZ_VAGL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5396108
            Assembly: GCF_005819265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 4105828)
  AUTHORS   Eigenbrod,T., Reuter,S., Gross,A., Kocer,K., Guenther,F.,
            Zimmermann,S., Heeg,K., Mutters,N.T. and Nurjadi,D.
  TITLE     Molecular characterization of carbapenem-resistant Acinetobacter
            baumannii using whole-genome sequencing revealed missed
            transmission events, Germany, 2012-2015
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4105828)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAY-2019) Institute for Infection Prevention and
            Hospital Epidemiology, Medical Center University of Freiburg,
            Breisacher Strasse 115B, Freiburg 79106, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAGL00000000.1.
            The Acinetobacter baumannii whole genome shotgun (WGS) project has
            the project accession NZ_VAGL00000000.  This version of the project
            (01) has the accession number NZ_VAGL01000000, and consists of
            sequences VAGL01000001-VAGL01000291.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 157x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005819265.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:03:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,113
            CDSs (total)                      :: 4,035
            Genes (coding)                    :: 3,884
            CDSs (with protein)               :: 3,884
            Genes (RNA)                       :: 78
            rRNAs                             :: 4, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 151
            CDSs (without protein)            :: 151
            Pseudo Genes (ambiguous residues) :: 0 of 151
            Pseudo Genes (frameshifted)       :: 16 of 151
            Pseudo Genes (incomplete)         :: 129 of 151
            Pseudo Genes (internal stop)      :: 9 of 151
            Pseudo Genes (multiple problems)  :: 3 of 151
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4105828
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="Aci00869"
                     /isolate="Aci00869"
                     /isolation_source="rectal swab"
                     /host="Homo sapiens"
                     /bio_material="rectal swab"
                     /db_xref="taxon:470"
                     /geo_loc_name="Germany"
                     /lat_lon="49.398750 N 8.672434 E"
                     /collection_date="2014-09-15"
WGS         VAGL01000001-VAGL01000291
WGS_SCAFLD  NZ_VAGL01000001-NZ_VAGL01000291
//
LOCUS       NZ_VAGW01000000      3953406 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter baumannii strain Aci00855 isolate Aci00855, whole
            genome shotgun sequencing project.
ACCESSION   NZ_VAGW00000000
VERSION     NZ_VAGW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5396119
            Assembly: GCF_005819595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 3953406)
  AUTHORS   Eigenbrod,T., Reuter,S., Gross,A., Kocer,K., Guenther,F.,
            Zimmermann,S., Heeg,K., Mutters,N.T. and Nurjadi,D.
  TITLE     Molecular characterization of carbapenem-resistant Acinetobacter
            baumannii using whole-genome sequencing revealed missed
            transmission events, Germany, 2012-2015
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3953406)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAY-2019) Institute for Infection Prevention and
            Hospital Epidemiology, Medical Center University of Freiburg,
            Breisacher Strasse 115B, Freiburg 79106, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAGW00000000.1.
            The Acinetobacter baumannii whole genome shotgun (WGS) project has
            the project accession NZ_VAGW00000000.  This version of the project
            (01) has the accession number NZ_VAGW01000000, and consists of
            sequences VAGW01000001-VAGW01000065.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 77x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005819595.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:47:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,832
            CDSs (total)                      :: 3,755
            Genes (coding)                    :: 3,677
            CDSs (with protein)               :: 3,677
            Genes (RNA)                       :: 77
            rRNAs                             :: 4, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3, 1, 4 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 78
            CDSs (without protein)            :: 78
            Pseudo Genes (ambiguous residues) :: 0 of 78
            Pseudo Genes (frameshifted)       :: 15 of 78
            Pseudo Genes (incomplete)         :: 49 of 78
            Pseudo Genes (internal stop)      :: 17 of 78
            Pseudo Genes (multiple problems)  :: 3 of 78
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3953406
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="Aci00855"
                     /isolate="Aci00855"
                     /isolation_source="tracheal secretion"
                     /host="Homo sapiens"
                     /bio_material="tracheal secretion"
                     /db_xref="taxon:470"
                     /geo_loc_name="Germany"
                     /lat_lon="49.398750 N 8.672434 E"
                     /collection_date="2013-07-01"
WGS         VAGW01000001-VAGW01000065
WGS_SCAFLD  NZ_VAGW01000001-NZ_VAGW01000065
//
LOCUS       NZ_ADTF01000000      4524315 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis YN2551, whole genome shotgun sequencing project.
ACCESSION   NZ_ADTF00000000
VERSION     NZ_ADTF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403105
            Assembly: GCF_000325425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis YN2551
  ORGANISM  Yersinia pestis YN2551
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4524315)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4524315)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADTF00000000.1.
            The Yersinia pestis YN2551 whole genome shotgun (WGS) project has
            the project accession NZ_ADTF00000000.  This version of the project
            (01) has the accession number NZ_ADTF01000000, and consists of
            sequences ADTF01000001-ADTF01000880.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 71X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000325425.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:40:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,323
            CDSs (total)                      :: 4,291
            Genes (coding)                    :: 3,983
            CDSs (with protein)               :: 3,983
            Genes (RNA)                       :: 32
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 22
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 308
            CDSs (without protein)            :: 308
            Pseudo Genes (ambiguous residues) :: 0 of 308
            Pseudo Genes (frameshifted)       :: 89 of 308
            Pseudo Genes (incomplete)         :: 228 of 308
            Pseudo Genes (internal stop)      :: 21 of 308
            Pseudo Genes (multiple problems)  :: 28 of 308
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4524315
                     /organism="Yersinia pestis YN2551"
                     /mol_type="genomic DNA"
                     /strain="YN2551"
                     /db_xref="taxon:755970"
WGS         ADTF01000001-ADTF01000880
WGS_SCAFLD  NZ_ADTF01000001-NZ_ADTF01000880
//
LOCUS       NZ_ADTB01000000      4371391 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis SHAN12, whole genome shotgun sequencing project.
ACCESSION   NZ_ADTB00000000
VERSION     NZ_ADTB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403101
            Assembly: GCF_000325345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis SHAN12
  ORGANISM  Yersinia pestis SHAN12
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4371391)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4371391)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADTB00000000.1.
            The Yersinia pestis SHAN12 whole genome shotgun (WGS) project has
            the project accession NZ_ADTB00000000.  This version of the project
            (01) has the accession number NZ_ADTB01000000, and consists of
            sequences ADTB01000001-ADTB01001362.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 43X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000325345.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:36:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,419
            CDSs (total)                      :: 4,387
            Genes (coding)                    :: 3,958
            CDSs (with protein)               :: 3,958
            Genes (RNA)                       :: 32
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 21
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 429
            CDSs (without protein)            :: 429
            Pseudo Genes (ambiguous residues) :: 0 of 429
            Pseudo Genes (frameshifted)       :: 92 of 429
            Pseudo Genes (incomplete)         :: 350 of 429
            Pseudo Genes (internal stop)      :: 21 of 429
            Pseudo Genes (multiple problems)  :: 32 of 429
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4371391
                     /organism="Yersinia pestis SHAN12"
                     /mol_type="genomic DNA"
                     /strain="SHAN12"
                     /db_xref="taxon:755966"
WGS         ADTB01000001-ADTB01001362
WGS_SCAFLD  NZ_ADTB01000001-NZ_ADTB01001362
//
LOCUS       NZ_VAFP01000000      3939823 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter baumannii strain Aci00845 isolate Aci00845, whole
            genome shotgun sequencing project.
ACCESSION   NZ_VAFP00000000
VERSION     NZ_VAFP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5396086
            Assembly: GCF_005819515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 3939823)
  AUTHORS   Eigenbrod,T., Reuter,S., Gross,A., Kocer,K., Guenther,F.,
            Zimmermann,S., Heeg,K., Mutters,N.T. and Nurjadi,D.
  TITLE     Molecular characterization of carbapenem-resistant Acinetobacter
            baumannii using whole-genome sequencing revealed missed
            transmission events, Germany, 2012-2015
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3939823)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAY-2019) Institute for Infection Prevention and
            Hospital Epidemiology, Medical Center University of Freiburg,
            Breisacher Strasse 115B, Freiburg 79106, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAFP00000000.1.
            The Acinetobacter baumannii whole genome shotgun (WGS) project has
            the project accession NZ_VAFP00000000.  This version of the project
            (01) has the accession number NZ_VAFP01000000, and consists of
            sequences VAFP01000001-VAFP01000479.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 46x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005819515.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:53:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,888
            CDSs (total)                      :: 3,811
            Genes (coding)                    :: 3,691
            CDSs (with protein)               :: 3,691
            Genes (RNA)                       :: 77
            rRNAs                             :: 4, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 120
            CDSs (without protein)            :: 120
            Pseudo Genes (ambiguous residues) :: 0 of 120
            Pseudo Genes (frameshifted)       :: 16 of 120
            Pseudo Genes (incomplete)         :: 97 of 120
            Pseudo Genes (internal stop)      :: 10 of 120
            Pseudo Genes (multiple problems)  :: 3 of 120
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3939823
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="Aci00845"
                     /isolate="Aci00845"
                     /isolation_source="wound swab"
                     /host="Homo sapiens"
                     /bio_material="wound swab"
                     /db_xref="taxon:470"
                     /geo_loc_name="Germany"
                     /lat_lon="49.398750 N 8.672434 E"
                     /collection_date="2013-11-09"
WGS         VAFP01000001-VAFP01000479
WGS_SCAFLD  NZ_VAFP01000001-NZ_VAFP01000479
//
LOCUS       NZ_ADTH01000000      4525667 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis YN472, whole genome shotgun sequencing project.
ACCESSION   NZ_ADTH00000000
VERSION     NZ_ADTH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403107
            Assembly: GCF_000325465.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis YN472
  ORGANISM  Yersinia pestis YN472
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4525667)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4525667)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADTH00000000.1.
            The Yersinia pestis YN472 whole genome shotgun (WGS) project has
            the project accession NZ_ADTH00000000.  This version of the project
            (01) has the accession number NZ_ADTH01000000, and consists of
            sequences ADTH01000001-ADTH01001105.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 68X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000325465.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:37:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,498
            CDSs (total)                      :: 4,475
            Genes (coding)                    :: 4,156
            CDSs (with protein)               :: 4,156
            Genes (RNA)                       :: 23
            tRNAs                             :: 17
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 319
            CDSs (without protein)            :: 319
            Pseudo Genes (ambiguous residues) :: 0 of 319
            Pseudo Genes (frameshifted)       :: 80 of 319
            Pseudo Genes (incomplete)         :: 251 of 319
            Pseudo Genes (internal stop)      :: 18 of 319
            Pseudo Genes (multiple problems)  :: 27 of 319
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4525667
                     /organism="Yersinia pestis YN472"
                     /mol_type="genomic DNA"
                     /strain="YN472"
                     /db_xref="taxon:755972"
WGS         ADTH01000001-ADTH01001105
WGS_SCAFLD  NZ_ADTH01000001-NZ_ADTH01001105
//
LOCUS       NZ_VAGU01000000      3995672 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter baumannii strain Aci00843 isolate Aci00843, whole
            genome shotgun sequencing project.
ACCESSION   NZ_VAGU00000000
VERSION     NZ_VAGU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5396117
            Assembly: GCF_005819085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 3995672)
  AUTHORS   Eigenbrod,T., Reuter,S., Gross,A., Kocer,K., Guenther,F.,
            Zimmermann,S., Heeg,K., Mutters,N.T. and Nurjadi,D.
  TITLE     Molecular characterization of carbapenem-resistant Acinetobacter
            baumannii using whole-genome sequencing revealed missed
            transmission events, Germany, 2012-2015
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3995672)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAY-2019) Institute for Infection Prevention and
            Hospital Epidemiology, Medical Center University of Freiburg,
            Breisacher Strasse 115B, Freiburg 79106, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAGU00000000.1.
            The Acinetobacter baumannii whole genome shotgun (WGS) project has
            the project accession NZ_VAGU00000000.  This version of the project
            (01) has the accession number NZ_VAGU01000000, and consists of
            sequences VAGU01000001-VAGU01000072.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 77x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005819085.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:42:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,904
            CDSs (total)                      :: 3,826
            Genes (coding)                    :: 3,739
            CDSs (with protein)               :: 3,739
            Genes (RNA)                       :: 78
            rRNAs                             :: 4, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3, 1, 4 (5S, 16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 87
            CDSs (without protein)            :: 87
            Pseudo Genes (ambiguous residues) :: 0 of 87
            Pseudo Genes (frameshifted)       :: 16 of 87
            Pseudo Genes (incomplete)         :: 64 of 87
            Pseudo Genes (internal stop)      :: 10 of 87
            Pseudo Genes (multiple problems)  :: 3 of 87
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3995672
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="Aci00843"
                     /isolate="Aci00843"
                     /isolation_source="bronchial secretion"
                     /host="Homo sapiens"
                     /bio_material="bronchial secretion"
                     /db_xref="taxon:470"
                     /geo_loc_name="Germany"
                     /lat_lon="49.398750 N 8.672434 E"
                     /collection_date="2014-03-24"
WGS         VAGU01000001-VAGU01000072
WGS_SCAFLD  NZ_VAGU01000001-NZ_VAGU01000072
//
LOCUS       NZ_ADTG01000000      4307940 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis YN2588, whole genome shotgun sequencing project.
ACCESSION   NZ_ADTG00000000
VERSION     NZ_ADTG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403106
            Assembly: GCF_000325445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis YN2588
  ORGANISM  Yersinia pestis YN2588
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4307940)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4307940)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADTG00000000.1.
            The Yersinia pestis YN2588 whole genome shotgun (WGS) project has
            the project accession NZ_ADTG00000000.  This version of the project
            (01) has the accession number NZ_ADTG01000000, and consists of
            sequences ADTG01000001-ADTG01001301.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 52X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000325445.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:33:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,346
            CDSs (total)                      :: 4,311
            Genes (coding)                    :: 3,862
            CDSs (with protein)               :: 3,862
            Genes (RNA)                       :: 35
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1, 3 (5S, 23S)
            tRNAs                             :: 22
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 449
            CDSs (without protein)            :: 449
            Pseudo Genes (ambiguous residues) :: 0 of 449
            Pseudo Genes (frameshifted)       :: 83 of 449
            Pseudo Genes (incomplete)         :: 373 of 449
            Pseudo Genes (internal stop)      :: 20 of 449
            Pseudo Genes (multiple problems)  :: 25 of 449
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4307940
                     /organism="Yersinia pestis YN2588"
                     /mol_type="genomic DNA"
                     /strain="YN2588"
                     /db_xref="taxon:755971"
WGS         ADTG01000001-ADTG01001301
WGS_SCAFLD  NZ_ADTG01000001-NZ_ADTG01001301
//
LOCUS       NZ_VAGK01000000      3949681 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter baumannii strain Aci00868 isolate Aci00868, whole
            genome shotgun sequencing project.
ACCESSION   NZ_VAGK00000000
VERSION     NZ_VAGK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5396107
            Assembly: GCF_005819275.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 3949681)
  AUTHORS   Eigenbrod,T., Reuter,S., Gross,A., Kocer,K., Guenther,F.,
            Zimmermann,S., Heeg,K., Mutters,N.T. and Nurjadi,D.
  TITLE     Molecular characterization of carbapenem-resistant Acinetobacter
            baumannii using whole-genome sequencing revealed missed
            transmission events, Germany, 2012-2015
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3949681)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAY-2019) Institute for Infection Prevention and
            Hospital Epidemiology, Medical Center University of Freiburg,
            Breisacher Strasse 115B, Freiburg 79106, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAGK00000000.1.
            The Acinetobacter baumannii whole genome shotgun (WGS) project has
            the project accession NZ_VAGK00000000.  This version of the project
            (01) has the accession number NZ_VAGK01000000, and consists of
            sequences VAGK01000001-VAGK01000122.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005819275.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:14:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,834
            CDSs (total)                      :: 3,763
            Genes (coding)                    :: 3,677
            CDSs (with protein)               :: 3,677
            Genes (RNA)                       :: 71
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 86
            CDSs (without protein)            :: 86
            Pseudo Genes (ambiguous residues) :: 0 of 86
            Pseudo Genes (frameshifted)       :: 25 of 86
            Pseudo Genes (incomplete)         :: 48 of 86
            Pseudo Genes (internal stop)      :: 17 of 86
            Pseudo Genes (multiple problems)  :: 4 of 86
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3949681
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="Aci00868"
                     /isolate="Aci00868"
                     /isolation_source="wound swab"
                     /host="Homo sapiens"
                     /bio_material="wound swab"
                     /db_xref="taxon:470"
                     /geo_loc_name="Germany"
                     /lat_lon="49.398750 N 8.672434 E"
                     /collection_date="2015-03-19"
WGS         VAGK01000001-VAGK01000122
WGS_SCAFLD  NZ_VAGK01000001-NZ_VAGK01000122
//
LOCUS       NZ_ADSV01000000      4438965 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis MGJZ12, whole genome shotgun sequencing project.
ACCESSION   NZ_ADSV00000000
VERSION     NZ_ADSV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403095
            Assembly: GCF_000325225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis MGJZ12
  ORGANISM  Yersinia pestis MGJZ12
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4438965)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4438965)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADSV00000000.1.
            The Yersinia pestis MGJZ12 whole genome shotgun (WGS) project has
            the project accession NZ_ADSV00000000.  This version of the project
            (01) has the accession number NZ_ADSV01000000, and consists of
            sequences ADSV01000001-ADSV01001203.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 58X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000325225.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:35:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,446
            CDSs (total)                      :: 4,410
            Genes (coding)                    :: 4,043
            CDSs (with protein)               :: 4,043
            Genes (RNA)                       :: 36
            rRNAs                             :: 1, 3, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 21
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 367
            CDSs (without protein)            :: 367
            Pseudo Genes (ambiguous residues) :: 0 of 367
            Pseudo Genes (frameshifted)       :: 76 of 367
            Pseudo Genes (incomplete)         :: 303 of 367
            Pseudo Genes (internal stop)      :: 17 of 367
            Pseudo Genes (multiple problems)  :: 27 of 367
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4438965
                     /organism="Yersinia pestis MGJZ12"
                     /mol_type="genomic DNA"
                     /strain="MGJZ12"
                     /db_xref="taxon:755960"
WGS         ADSV01000001-ADSV01001203
WGS_SCAFLD  NZ_ADSV01000001-NZ_ADSV01001203
//
LOCUS       NZ_VAGI01000000      3972032 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter baumannii strain Aci00865 isolate Aci00865, whole
            genome shotgun sequencing project.
ACCESSION   NZ_VAGI00000000
VERSION     NZ_VAGI00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5396105
            Assembly: GCF_005819305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 3972032)
  AUTHORS   Eigenbrod,T., Reuter,S., Gross,A., Kocer,K., Guenther,F.,
            Zimmermann,S., Heeg,K., Mutters,N.T. and Nurjadi,D.
  TITLE     Molecular characterization of carbapenem-resistant Acinetobacter
            baumannii using whole-genome sequencing revealed missed
            transmission events, Germany, 2012-2015
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3972032)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-MAY-2019) Institute for Infection Prevention and
            Hospital Epidemiology, Medical Center University of Freiburg,
            Breisacher Strasse 115B, Freiburg 79106, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAGI00000000.1.
            The Acinetobacter baumannii whole genome shotgun (WGS) project has
            the project accession NZ_VAGI00000000.  This version of the project
            (01) has the accession number NZ_VAGI01000000, and consists of
            sequences VAGI01000001-VAGI01000122.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 183x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005819305.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:57:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,887
            CDSs (total)                      :: 3,810
            Genes (coding)                    :: 3,713
            CDSs (with protein)               :: 3,713
            Genes (RNA)                       :: 77
            rRNAs                             :: 4, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 97
            CDSs (without protein)            :: 97
            Pseudo Genes (ambiguous residues) :: 0 of 97
            Pseudo Genes (frameshifted)       :: 17 of 97
            Pseudo Genes (incomplete)         :: 70 of 97
            Pseudo Genes (internal stop)      :: 13 of 97
            Pseudo Genes (multiple problems)  :: 3 of 97
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3972032
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="Aci00865"
                     /isolate="Aci00865"
                     /isolation_source="wound swab"
                     /host="Homo sapiens"
                     /bio_material="wound swab"
                     /db_xref="taxon:470"
                     /geo_loc_name="Germany"
                     /lat_lon="49.398750 N 8.672434 E"
                     /collection_date="2013-06-26"
WGS         VAGI01000001-VAGI01000122
WGS_SCAFLD  NZ_VAGI01000001-NZ_VAGI01000122
//
LOCUS       NZ_ADRZ01000000      4516254 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis biovar Antiqua str. E1979001, whole genome shotgun
            sequencing project.
ACCESSION   NZ_ADRZ00000000
VERSION     NZ_ADRZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403021
            Assembly: GCF_000324785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis biovar Antiqua str. E1979001
  ORGANISM  Yersinia pestis biovar Antiqua str. E1979001
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4516254)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Genome dynamics and evolutionary history of the plague pathogen,
            Yersinia pestis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4516254)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADRZ00000000.1.
            The Yersinia pestis biovar Antiqua str. E1979001 whole genome
            shotgun (WGS) project has the project accession NZ_ADRZ00000000.
            This version of the project (01) has the accession number
            NZ_ADRZ01000000, and consists of sequences
            ADRZ01000001-ADRZ01000941.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 49X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000324785.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:40:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,369
            CDSs (total)                      :: 4,337
            Genes (coding)                    :: 4,026
            CDSs (with protein)               :: 4,026
            Genes (RNA)                       :: 32
            rRNAs                             :: 1, 3 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 23S)
            tRNAs                             :: 20
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 311
            CDSs (without protein)            :: 311
            Pseudo Genes (ambiguous residues) :: 0 of 311
            Pseudo Genes (frameshifted)       :: 80 of 311
            Pseudo Genes (incomplete)         :: 242 of 311
            Pseudo Genes (internal stop)      :: 18 of 311
            Pseudo Genes (multiple problems)  :: 27 of 311
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4516254
                     /organism="Yersinia pestis biovar Antiqua str. E1979001"
                     /mol_type="genomic DNA"
                     /strain="E1979001"
                     /sub_species="pestis"
                     /db_xref="taxon:360099"
                     /biovar="Antiqua"
WGS         ADRZ01000001-ADRZ01000941
WGS_SCAFLD  NZ_ADRZ01000001-NZ_ADRZ01000941
//
LOCUS       NZ_VAGE01000000      4181765 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter baumannii strain Aci00859 isolate Aci00859, whole
            genome shotgun sequencing project.
ACCESSION   NZ_VAGE00000000
VERSION     NZ_VAGE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5396101
            Assembly: GCF_005819685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 4181765)
  AUTHORS   Eigenbrod,T., Reuter,S., Gross,A., Kocer,K., Guenther,F.,
            Zimmermann,S., Heeg,K., Mutters,N.T. and Nurjadi,D.
  TITLE     Molecular characterization of carbapenem-resistant Acinetobacter
            baumannii using whole-genome sequencing revealed missed
            transmission events, Germany, 2012-2015
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4181765)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAY-2019) Institute for Infection Prevention and
            Hospital Epidemiology, Medical Center University of Freiburg,
            Breisacher Strasse 115B, Freiburg 79106, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAGE00000000.1.
            The Acinetobacter baumannii whole genome shotgun (WGS) project has
            the project accession NZ_VAGE00000000.  This version of the project
            (01) has the accession number NZ_VAGE01000000, and consists of
            sequences VAGE01000001-VAGE01000092.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 151x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005819685.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:03:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,131
            CDSs (total)                      :: 4,054
            Genes (coding)                    :: 3,946
            CDSs (with protein)               :: 3,946
            Genes (RNA)                       :: 77
            rRNAs                             :: 6, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 23S)
            partial rRNAs                     :: 3, 2 (5S, 16S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 35 of 108
            Pseudo Genes (incomplete)         :: 71 of 108
            Pseudo Genes (internal stop)      :: 18 of 108
            Pseudo Genes (multiple problems)  :: 15 of 108
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4181765
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="Aci00859"
                     /isolate="Aci00859"
                     /isolation_source="wound swab"
                     /host="Homo sapiens"
                     /bio_material="wound swab"
                     /db_xref="taxon:470"
                     /geo_loc_name="Germany"
                     /lat_lon="49.398750 N 8.672434 E"
                     /collection_date="2015-06-09"
WGS         VAGE01000001-VAGE01000092
WGS_SCAFLD  NZ_VAGE01000001-NZ_VAGE01000092
//
LOCUS       NZ_VAHB01000000      3951687 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter baumannii strain Aci00870 isolate Aci00870, whole
            genome shotgun sequencing project.
ACCESSION   NZ_VAHB00000000
VERSION     NZ_VAHB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5396124
            Assembly: GCF_005819005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 3951687)
  AUTHORS   Eigenbrod,T., Reuter,S., Gross,A., Kocer,K., Guenther,F.,
            Zimmermann,S., Heeg,K., Mutters,N.T. and Nurjadi,D.
  TITLE     Molecular characterization of carbapenem-resistant Acinetobacter
            baumannii using whole-genome sequencing revealed missed
            transmission events, Germany, 2012-2015
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3951687)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-MAY-2019) Institute for Infection Prevention and
            Hospital Epidemiology, Medical Center University of Freiburg,
            Breisacher Strasse 115B, Freiburg 79106, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAHB00000000.1.
            The Acinetobacter baumannii whole genome shotgun (WGS) project has
            the project accession NZ_VAHB00000000.  This version of the project
            (01) has the accession number NZ_VAHB01000000, and consists of
            sequences VAHB01000001-VAHB01000056.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 27x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005819005.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:52:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,826
            CDSs (total)                      :: 3,751
            Genes (coding)                    :: 3,673
            CDSs (with protein)               :: 3,673
            Genes (RNA)                       :: 75
            rRNAs                             :: 4, 1, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3, 4 (5S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 78
            CDSs (without protein)            :: 78
            Pseudo Genes (ambiguous residues) :: 0 of 78
            Pseudo Genes (frameshifted)       :: 15 of 78
            Pseudo Genes (incomplete)         :: 49 of 78
            Pseudo Genes (internal stop)      :: 17 of 78
            Pseudo Genes (multiple problems)  :: 3 of 78
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3951687
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="Aci00870"
                     /isolate="Aci00870"
                     /isolation_source="bronchial secretion"
                     /host="Homo sapiens"
                     /bio_material="bronchial secretion"
                     /db_xref="taxon:470"
                     /geo_loc_name="Germany"
                     /lat_lon="49.398750 N 8.672434 E"
                     /collection_date="2013-03-30"
WGS         VAHB01000001-VAHB01000056
WGS_SCAFLD  NZ_VAHB01000001-NZ_VAHB01000056
//
LOCUS       NZ_VAFR01000000      4044421 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter baumannii strain Aci00836 isolate Aci00836, whole
            genome shotgun sequencing project.
ACCESSION   NZ_VAFR00000000
VERSION     NZ_VAFR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5396088
            Assembly: GCF_005819535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 4044421)
  AUTHORS   Eigenbrod,T., Reuter,S., Gross,A., Kocer,K., Guenther,F.,
            Zimmermann,S., Heeg,K., Mutters,N.T. and Nurjadi,D.
  TITLE     Molecular characterization of carbapenem-resistant Acinetobacter
            baumannii using whole-genome sequencing revealed missed
            transmission events, Germany, 2012-2015
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4044421)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-MAY-2019) Institute for Infection Prevention and
            Hospital Epidemiology, Medical Center University of Freiburg,
            Breisacher Strasse 115B, Freiburg 79106, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAFR00000000.1.
            The Acinetobacter baumannii whole genome shotgun (WGS) project has
            the project accession NZ_VAFR00000000.  This version of the project
            (01) has the accession number NZ_VAFR01000000, and consists of
            sequences VAFR01000001-VAFR01000142.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 117x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005819535.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:11:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,948
            CDSs (total)                      :: 3,871
            Genes (coding)                    :: 3,769
            CDSs (with protein)               :: 3,769
            Genes (RNA)                       :: 77
            rRNAs                             :: 4, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 102
            CDSs (without protein)            :: 102
            Pseudo Genes (ambiguous residues) :: 0 of 102
            Pseudo Genes (frameshifted)       :: 20 of 102
            Pseudo Genes (incomplete)         :: 70 of 102
            Pseudo Genes (internal stop)      :: 18 of 102
            Pseudo Genes (multiple problems)  :: 6 of 102
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4044421
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="Aci00836"
                     /isolate="Aci00836"
                     /isolation_source="rectal swab"
                     /host="Homo sapiens"
                     /bio_material="rectal swab"
                     /db_xref="taxon:470"
                     /geo_loc_name="Germany"
                     /lat_lon="49.398750 N 8.672434 E"
                     /collection_date="2013-04-11"
WGS         VAFR01000001-VAFR01000142
WGS_SCAFLD  NZ_VAFR01000001-NZ_VAFR01000142
//
LOCUS       NZ_ADSX01000000      4368072 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis MGJZ6, whole genome shotgun sequencing project.
ACCESSION   NZ_ADSX00000000
VERSION     NZ_ADSX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403097
            Assembly: GCF_000325265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis MGJZ6
  ORGANISM  Yersinia pestis MGJZ6
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4368072)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4368072)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADSX00000000.1.
            The Yersinia pestis MGJZ6 whole genome shotgun (WGS) project has
            the project accession NZ_ADSX00000000.  This version of the project
            (01) has the accession number NZ_ADSX01000000, and consists of
            sequences ADSX01000001-ADSX01001016.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 60X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000325265.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:40:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,259
            CDSs (total)                      :: 4,221
            Genes (coding)                    :: 3,925
            CDSs (with protein)               :: 3,925
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 2, 7 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 7 (5S, 16S, 23S)
            tRNAs                             :: 20
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 296
            CDSs (without protein)            :: 296
            Pseudo Genes (ambiguous residues) :: 0 of 296
            Pseudo Genes (frameshifted)       :: 76 of 296
            Pseudo Genes (incomplete)         :: 235 of 296
            Pseudo Genes (internal stop)      :: 18 of 296
            Pseudo Genes (multiple problems)  :: 30 of 296
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4368072
                     /organism="Yersinia pestis MGJZ6"
                     /mol_type="genomic DNA"
                     /strain="MGJZ6"
                     /db_xref="taxon:755962"
WGS         ADSX01000001-ADSX01001016
WGS_SCAFLD  NZ_ADSX01000001-NZ_ADSX01001016
//
LOCUS       NZ_VAGA01000000      4249313 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter baumannii strain Aci00850 isolate Aci00850, whole
            genome shotgun sequencing project.
ACCESSION   NZ_VAGA00000000
VERSION     NZ_VAGA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5396097
            Assembly: GCF_005819415.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 4249313)
  AUTHORS   Eigenbrod,T., Reuter,S., Gross,A., Kocer,K., Guenther,F.,
            Zimmermann,S., Heeg,K., Mutters,N.T. and Nurjadi,D.
  TITLE     Molecular characterization of carbapenem-resistant Acinetobacter
            baumannii using whole-genome sequencing revealed missed
            transmission events, Germany, 2012-2015
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4249313)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAY-2019) Institute for Infection Prevention and
            Hospital Epidemiology, Medical Center University of Freiburg,
            Breisacher Strasse 115B, Freiburg 79106, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAGA00000000.1.
            The Acinetobacter baumannii whole genome shotgun (WGS) project has
            the project accession NZ_VAGA00000000.  This version of the project
            (01) has the accession number NZ_VAGA01000000, and consists of
            sequences VAGA01000001-VAGA01000280.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 154x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005819415.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:02:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,281
            CDSs (total)                      :: 4,202
            Genes (coding)                    :: 4,067
            CDSs (with protein)               :: 4,067
            Genes (RNA)                       :: 79
            rRNAs                             :: 4, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 3, 2, 1 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 135
            CDSs (without protein)            :: 135
            Pseudo Genes (ambiguous residues) :: 0 of 135
            Pseudo Genes (frameshifted)       :: 20 of 135
            Pseudo Genes (incomplete)         :: 101 of 135
            Pseudo Genes (internal stop)      :: 19 of 135
            Pseudo Genes (multiple problems)  :: 5 of 135
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4249313
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="Aci00850"
                     /isolate="Aci00850"
                     /isolation_source="wound swab"
                     /host="Homo sapiens"
                     /bio_material="wound swab"
                     /db_xref="taxon:470"
                     /geo_loc_name="Germany"
                     /lat_lon="49.398750 N 8.672434 E"
                     /collection_date="2012-08-18"
WGS         VAGA01000001-VAGA01000280
WGS_SCAFLD  NZ_VAGA01000001-NZ_VAGA01000280
//
LOCUS       NZ_ADSW01000000      4453871 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis MGJZ3, whole genome shotgun sequencing project.
ACCESSION   NZ_ADSW00000000
VERSION     NZ_ADSW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403096
            Assembly: GCF_000325245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis MGJZ3
  ORGANISM  Yersinia pestis MGJZ3
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4453871)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4453871)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADSW00000000.1.
            The Yersinia pestis MGJZ3 whole genome shotgun (WGS) project has
            the project accession NZ_ADSW00000000.  This version of the project
            (01) has the accession number NZ_ADSW01000000, and consists of
            sequences ADSW01000001-ADSW01001187.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 80X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000325245.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 09:43:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,528
            CDSs (total)                      :: 4,504
            Genes (coding)                    :: 4,135
            CDSs (with protein)               :: 4,135
            Genes (RNA)                       :: 24
            tRNAs                             :: 17
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 369
            CDSs (without protein)            :: 369
            Pseudo Genes (ambiguous residues) :: 0 of 369
            Pseudo Genes (frameshifted)       :: 76 of 369
            Pseudo Genes (incomplete)         :: 305 of 369
            Pseudo Genes (internal stop)      :: 18 of 369
            Pseudo Genes (multiple problems)  :: 26 of 369
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4453871
                     /organism="Yersinia pestis MGJZ3"
                     /mol_type="genomic DNA"
                     /strain="MGJZ3"
                     /db_xref="taxon:755961"
WGS         ADSW01000001-ADSW01001187
WGS_SCAFLD  NZ_ADSW01000001-NZ_ADSW01001187
//
LOCUS       NZ_VAGM01000000      4150963 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter baumannii strain Aci00854 isolate Aci00854, whole
            genome shotgun sequencing project.
ACCESSION   NZ_VAGM00000000
VERSION     NZ_VAGM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5396109
            Assembly: GCF_005819225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 4150963)
  AUTHORS   Eigenbrod,T., Reuter,S., Gross,A., Kocer,K., Guenther,F.,
            Zimmermann,S., Heeg,K., Mutters,N.T. and Nurjadi,D.
  TITLE     Molecular characterization of carbapenem-resistant Acinetobacter
            baumannii using whole-genome sequencing revealed missed
            transmission events, Germany, 2012-2015
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4150963)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAY-2019) Institute for Infection Prevention and
            Hospital Epidemiology, Medical Center University of Freiburg,
            Breisacher Strasse 115B, Freiburg 79106, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAGM00000000.1.
            The Acinetobacter baumannii whole genome shotgun (WGS) project has
            the project accession NZ_VAGM00000000.  This version of the project
            (01) has the accession number NZ_VAGM01000000, and consists of
            sequences VAGM01000001-VAGM01000104.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 218x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005819225.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:13:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,061
            CDSs (total)                      :: 3,984
            Genes (coding)                    :: 3,893
            CDSs (with protein)               :: 3,893
            Genes (RNA)                       :: 77
            rRNAs                             :: 4, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 91
            CDSs (without protein)            :: 91
            Pseudo Genes (ambiguous residues) :: 0 of 91
            Pseudo Genes (frameshifted)       :: 26 of 91
            Pseudo Genes (incomplete)         :: 60 of 91
            Pseudo Genes (internal stop)      :: 14 of 91
            Pseudo Genes (multiple problems)  :: 8 of 91
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4150963
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="Aci00854"
                     /isolate="Aci00854"
                     /isolation_source="tracheal secretion"
                     /host="Homo sapiens"
                     /bio_material="tracheal secretion"
                     /db_xref="taxon:470"
                     /geo_loc_name="Germany"
                     /lat_lon="49.398750 N 8.672434 E"
                     /collection_date="2012-08-03"
WGS         VAGM01000001-VAGM01000104
WGS_SCAFLD  NZ_VAGM01000001-NZ_VAGM01000104
//
LOCUS       NZ_VAGC01000000      3917388 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter baumannii strain Aci00853 isolate Aci00853, whole
            genome shotgun sequencing project.
ACCESSION   NZ_VAGC00000000
VERSION     NZ_VAGC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5396099
            Assembly: GCF_005819375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 3917388)
  AUTHORS   Eigenbrod,T., Reuter,S., Gross,A., Kocer,K., Guenther,F.,
            Zimmermann,S., Heeg,K., Mutters,N.T. and Nurjadi,D.
  TITLE     Molecular characterization of carbapenem-resistant Acinetobacter
            baumannii using whole-genome sequencing revealed missed
            transmission events, Germany, 2012-2015
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3917388)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAY-2019) Institute for Infection Prevention and
            Hospital Epidemiology, Medical Center University of Freiburg,
            Breisacher Strasse 115B, Freiburg 79106, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAGC00000000.1.
            The Acinetobacter baumannii whole genome shotgun (WGS) project has
            the project accession NZ_VAGC00000000.  This version of the project
            (01) has the accession number NZ_VAGC01000000, and consists of
            sequences VAGC01000001-VAGC01000105.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 171x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005819375.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:03:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,802
            CDSs (total)                      :: 3,727
            Genes (coding)                    :: 3,629
            CDSs (with protein)               :: 3,629
            Genes (RNA)                       :: 75
            rRNAs                             :: 4, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 3, 2, 1 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 98
            CDSs (without protein)            :: 98
            Pseudo Genes (ambiguous residues) :: 0 of 98
            Pseudo Genes (frameshifted)       :: 20 of 98
            Pseudo Genes (incomplete)         :: 67 of 98
            Pseudo Genes (internal stop)      :: 15 of 98
            Pseudo Genes (multiple problems)  :: 4 of 98
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3917388
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="Aci00853"
                     /isolate="Aci00853"
                     /isolation_source="wound swab"
                     /host="Homo sapiens"
                     /bio_material="wound swab"
                     /db_xref="taxon:470"
                     /geo_loc_name="Germany"
                     /lat_lon="49.398750 N 8.672434 E"
                     /collection_date="2012-10-12"
WGS         VAGC01000001-VAGC01000105
WGS_SCAFLD  NZ_VAGC01000001-NZ_VAGC01000105
//
LOCUS       NZ_VAGX01000000      3952179 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter baumannii strain Aci00858 isolate Aci00858, whole
            genome shotgun sequencing project.
ACCESSION   NZ_VAGX00000000
VERSION     NZ_VAGX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5396120
            Assembly: GCF_005819115.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 3952179)
  AUTHORS   Eigenbrod,T., Reuter,S., Gross,A., Kocer,K., Guenther,F.,
            Zimmermann,S., Heeg,K., Mutters,N.T. and Nurjadi,D.
  TITLE     Molecular characterization of carbapenem-resistant Acinetobacter
            baumannii using whole-genome sequencing revealed missed
            transmission events, Germany, 2012-2015
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3952179)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAY-2019) Institute for Infection Prevention and
            Hospital Epidemiology, Medical Center University of Freiburg,
            Breisacher Strasse 115B, Freiburg 79106, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAGX00000000.1.
            The Acinetobacter baumannii whole genome shotgun (WGS) project has
            the project accession NZ_VAGX00000000.  This version of the project
            (01) has the accession number NZ_VAGX01000000, and consists of
            sequences VAGX01000001-VAGX01000063.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 66x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005819115.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:51:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,830
            CDSs (total)                      :: 3,753
            Genes (coding)                    :: 3,673
            CDSs (with protein)               :: 3,673
            Genes (RNA)                       :: 77
            rRNAs                             :: 4, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3, 1, 4 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 80
            CDSs (without protein)            :: 80
            Pseudo Genes (ambiguous residues) :: 0 of 80
            Pseudo Genes (frameshifted)       :: 14 of 80
            Pseudo Genes (incomplete)         :: 52 of 80
            Pseudo Genes (internal stop)      :: 17 of 80
            Pseudo Genes (multiple problems)  :: 3 of 80
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3952179
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="Aci00858"
                     /isolate="Aci00858"
                     /isolation_source="drainage liquid"
                     /host="Homo sapiens"
                     /bio_material="drainage liquid"
                     /db_xref="taxon:470"
                     /geo_loc_name="Germany"
                     /lat_lon="49.398750 N 8.672434 E"
                     /collection_date="2013-06-03"
WGS         VAGX01000001-VAGX01000063
WGS_SCAFLD  NZ_VAGX01000001-NZ_VAGX01000063
//
LOCUS       NZ_ADTC01000000      4472301 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis YN1065, whole genome shotgun sequencing project.
ACCESSION   NZ_ADTC00000000
VERSION     NZ_ADTC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02403102
            Assembly: GCF_000325365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis YN1065
  ORGANISM  Yersinia pestis YN1065
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4472301)
  AUTHORS   Cui,Y., Yu,C., Yan,Y., Li,D., Li,Y., Jombart,T., Weinert,L.A.,
            Wang,Z., Guo,Z., Xu,L., Zhang,Y., Zheng,H., Qin,N., Xiao,X., Wu,M.,
            Wang,X., Zhou,D., Qi,Z., Du,Z., Wu,H., Yang,X., Cao,H., Wang,H.,
            Wang,J., Yao,S., Rakin,A., Li,Y., Falush,D., Balloux,F.,
            Achtman,M., Song,Y., Wang,J. and Yang,R.
  TITLE     Historical variations in mutation rate in an epidemic pathogen,
            Yersinia pestis
  JOURNAL   Proc Natl Acad Sci U S A 110 (2), 577-582 (2013)
   PUBMED   23271803
REFERENCE   2  (bases 1 to 4472301)
  AUTHORS   Li,D. and Cui,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) BGI, Beishan Industrial Zone, Yantian
            District, 518083, Shenzhen, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            ADTC00000000.1.
            The Yersinia pestis YN1065 whole genome shotgun (WGS) project has
            the project accession NZ_ADTC00000000.  This version of the project
            (01) has the accession number NZ_ADTC01000000, and consists of
            sequences ADTC01000001-ADTC01001395.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Soapdenovo v. 2009.07.14
            Genome Coverage       :: 57X
            Sequencing Technology :: Illumina GA II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000325365.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 10:03:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,606
            CDSs (total)                      :: 4,573
            Genes (coding)                    :: 4,093
            CDSs (with protein)               :: 4,093
            Genes (RNA)                       :: 33
            rRNAs                             :: 3, 3 (16S, 23S)
            partial rRNAs                     :: 3, 3 (16S, 23S)
            tRNAs                             :: 20
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 480
            CDSs (without protein)            :: 480
            Pseudo Genes (ambiguous residues) :: 0 of 480
            Pseudo Genes (frameshifted)       :: 84 of 480
            Pseudo Genes (incomplete)         :: 406 of 480
            Pseudo Genes (internal stop)      :: 17 of 480
            Pseudo Genes (multiple problems)  :: 25 of 480
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4472301
                     /organism="Yersinia pestis YN1065"
                     /mol_type="genomic DNA"
                     /strain="YN1065"
                     /db_xref="taxon:755967"
WGS         ADTC01000001-ADTC01001395
WGS_SCAFLD  NZ_ADTC01000001-NZ_ADTC01001395
//
LOCUS       NZ_VAGZ01000000      3922928 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter baumannii strain Aci00864 isolate Aci00864, whole
            genome shotgun sequencing project.
ACCESSION   NZ_VAGZ00000000
VERSION     NZ_VAGZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5396122
            Assembly: GCF_005819035.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 3922928)
  AUTHORS   Eigenbrod,T., Reuter,S., Gross,A., Kocer,K., Guenther,F.,
            Zimmermann,S., Heeg,K., Mutters,N.T. and Nurjadi,D.
  TITLE     Molecular characterization of carbapenem-resistant Acinetobacter
            baumannii using whole-genome sequencing revealed missed
            transmission events, Germany, 2012-2015
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3922928)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAY-2019) Institute for Infection Prevention and
            Hospital Epidemiology, Medical Center University of Freiburg,
            Breisacher Strasse 115B, Freiburg 79106, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAGZ00000000.1.
            The Acinetobacter baumannii whole genome shotgun (WGS) project has
            the project accession NZ_VAGZ00000000.  This version of the project
            (01) has the accession number NZ_VAGZ01000000, and consists of
            sequences VAGZ01000001-VAGZ01000070.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 55x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005819035.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:48:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,808
            CDSs (total)                      :: 3,731
            Genes (coding)                    :: 3,649
            CDSs (with protein)               :: 3,649
            Genes (RNA)                       :: 77
            rRNAs                             :: 4, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3, 1, 3 (5S, 16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 17 of 82
            Pseudo Genes (incomplete)         :: 55 of 82
            Pseudo Genes (internal stop)      :: 13 of 82
            Pseudo Genes (multiple problems)  :: 3 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3922928
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="Aci00864"
                     /isolate="Aci00864"
                     /isolation_source="screening swab"
                     /host="Homo sapiens"
                     /bio_material="screening swab"
                     /db_xref="taxon:470"
                     /geo_loc_name="Germany"
                     /lat_lon="49.398750 N 8.672434 E"
                     /collection_date="2012/2015"
WGS         VAGZ01000001-VAGZ01000070
WGS_SCAFLD  NZ_VAGZ01000001-NZ_VAGZ01000070
//
LOCUS       NZ_LBFJ01000000      4827235 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Yersinia pestis subsp. pestis bv. Orientalis strain ZE94-2122,
            whole genome shotgun sequencing project.
ACCESSION   NZ_LBFJ00000000
VERSION     NZ_LBFJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02999506
            Assembly: GCF_000986995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Yersinia pestis subsp. pestis bv. Orientalis
  ORGANISM  Yersinia pestis subsp. pestis bv. Orientalis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Yersinia.
REFERENCE   1  (bases 1 to 4827235)
  AUTHORS   Knight,B.M., O'Shea,R.M., Sorrell,S.S., Roberts,D.P., Lin,D.,
            Hari,K. and Winegar,R.A.
  CONSRTM   Consortium for Microbial Forensics and Genomics (microFORGE)
  TITLE     Draft genome sequence of Yersinia Pestis strain ZE94-2122,
            originally isolated in Zimbabwe
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4827235)
  AUTHORS   Knight,B.M., O'Shea,R.M., Sorrell,S.S., Roberts,D.P., Lin,D.,
            Hari,K. and Winegar,R.A.
  CONSRTM   Consortium for Microbial Forensics and Genomics (microFORGE)
  TITLE     Direct Submission
  JOURNAL   Submitted (20-APR-2015) Biosurveillance, MRIGlobal, 1470 Treeland
            Blvd, Palm Bay, FL 32909, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LBFJ00000000.1.
            The Yersinia pestis subsp. pestis bv. Orientalis whole genome
            shotgun (WGS) project has the project accession NZ_LBFJ00000000.
            This version of the project (01) has the accession number
            NZ_LBFJ01000000, and consists of sequences
            LBFJ01000001-LBFJ01000083.
            The following reagent was obtained through BEI Resources, NIAID,
            NIH: Yersinia pestis, Strain ZE94-2122, NR-635.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Trimmomatic v. 0.32; SGA v. 0.10.13;
                                     iMetAMOS v. 1.5; samtools v1.1; FastQC v.
                                     0.10.0; Spades v. 3.1.1; idba v1.1.1;
                                     Pilon v. 1.8; Quast v. 2.2; Prokka v. 1.7
            Assembly Name         :: YPES001-SEQ-2-ASM-1
            Genome Coverage       :: 307.389x
            Sequencing Technology :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000986995.1-RS_2026_03_21
            Annotation Date                   :: 03/21/2026 11:07:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,467
            CDSs (total)                      :: 4,380
            Genes (coding)                    :: 4,098
            CDSs (with protein)               :: 4,098
            Genes (RNA)                       :: 87
            rRNAs                             :: 5, 7, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 7, 5 (5S, 16S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 282
            CDSs (without protein)            :: 282
            Pseudo Genes (ambiguous residues) :: 1 of 282
            Pseudo Genes (frameshifted)       :: 101 of 282
            Pseudo Genes (incomplete)         :: 196 of 282
            Pseudo Genes (internal stop)      :: 22 of 282
            Pseudo Genes (multiple problems)  :: 34 of 282
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4827235
                     /organism="Yersinia pestis subsp. pestis bv. Orientalis"
                     /mol_type="genomic DNA"
                     /strain="ZE94-2122"
                     /host="Homo sapiens"
                     /sub_species="pestis"
                     /db_xref="taxon:1234661"
                     /geo_loc_name="Zimbabwe"
                     /collection_date="1994"
                     /biovar="Orientalis"
WGS         LBFJ01000001-LBFJ01000083
WGS_SCAFLD  NZ_CM003247
WGS_SCAFLD  NZ_LBFJ01000001-NZ_LBFJ01000081
WGS_SCAFLD  NZ_LBFJ01000083
//
LOCUS       NZ_VAGH01000000      4075382 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter baumannii strain Aci00863 isolate Aci00863, whole
            genome shotgun sequencing project.
ACCESSION   NZ_VAGH00000000
VERSION     NZ_VAGH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5396104
            Assembly: GCF_005819325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 4075382)
  AUTHORS   Eigenbrod,T., Reuter,S., Gross,A., Kocer,K., Guenther,F.,
            Zimmermann,S., Heeg,K., Mutters,N.T. and Nurjadi,D.
  TITLE     Molecular characterization of carbapenem-resistant Acinetobacter
            baumannii using whole-genome sequencing revealed missed
            transmission events, Germany, 2012-2015
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4075382)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAY-2019) Institute for Infection Prevention and
            Hospital Epidemiology, Medical Center University of Freiburg,
            Breisacher Strasse 115B, Freiburg 79106, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAGH00000000.1.
            The Acinetobacter baumannii whole genome shotgun (WGS) project has
            the project accession NZ_VAGH00000000.  This version of the project
            (01) has the accession number NZ_VAGH01000000, and consists of
            sequences VAGH01000001-VAGH01000115.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 152x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005819325.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:56:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,995
            CDSs (total)                      :: 3,917
            Genes (coding)                    :: 3,820
            CDSs (with protein)               :: 3,820
            Genes (RNA)                       :: 78
            rRNAs                             :: 4, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 97
            CDSs (without protein)            :: 97
            Pseudo Genes (ambiguous residues) :: 0 of 97
            Pseudo Genes (frameshifted)       :: 21 of 97
            Pseudo Genes (incomplete)         :: 71 of 97
            Pseudo Genes (internal stop)      :: 13 of 97
            Pseudo Genes (multiple problems)  :: 7 of 97
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4075382
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="Aci00863"
                     /isolate="Aci00863"
                     /isolation_source="tracheal secretion"
                     /host="Homo sapiens"
                     /bio_material="tracheal secretion"
                     /db_xref="taxon:470"
                     /geo_loc_name="Germany"
                     /lat_lon="49.398750 N 8.672434 E"
                     /collection_date="2013-09-02"
WGS         VAGH01000001-VAGH01000115
WGS_SCAFLD  NZ_VAGH01000001-NZ_VAGH01000115
//
LOCUS       NZ_VAFV01000000      4018449 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter baumannii strain Aci00841 isolate Aci00841, whole
            genome shotgun sequencing project.
ACCESSION   NZ_VAFV00000000
VERSION     NZ_VAFV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5396092
            Assembly: GCF_005819445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 4018449)
  AUTHORS   Eigenbrod,T., Reuter,S., Gross,A., Kocer,K., Guenther,F.,
            Zimmermann,S., Heeg,K., Mutters,N.T. and Nurjadi,D.
  TITLE     Molecular characterization of carbapenem-resistant Acinetobacter
            baumannii using whole-genome sequencing revealed missed
            transmission events, Germany, 2012-2015
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4018449)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-MAY-2019) Institute for Infection Prevention and
            Hospital Epidemiology, Medical Center University of Freiburg,
            Breisacher Strasse 115B, Freiburg 79106, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAFV00000000.1.
            The Acinetobacter baumannii whole genome shotgun (WGS) project has
            the project accession NZ_VAFV00000000.  This version of the project
            (01) has the accession number NZ_VAFV01000000, and consists of
            sequences VAFV01000001-VAFV01000147.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 159x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005819445.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:10:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,911
            CDSs (total)                      :: 3,834
            Genes (coding)                    :: 3,730
            CDSs (with protein)               :: 3,730
            Genes (RNA)                       :: 77
            rRNAs                             :: 5, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 3, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 104
            CDSs (without protein)            :: 104
            Pseudo Genes (ambiguous residues) :: 0 of 104
            Pseudo Genes (frameshifted)       :: 20 of 104
            Pseudo Genes (incomplete)         :: 74 of 104
            Pseudo Genes (internal stop)      :: 13 of 104
            Pseudo Genes (multiple problems)  :: 3 of 104
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4018449
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="Aci00841"
                     /isolate="Aci00841"
                     /isolation_source="rectal swab"
                     /host="Homo sapiens"
                     /bio_material="rectal swab"
                     /db_xref="taxon:470"
                     /geo_loc_name="Germany"
                     /lat_lon="49.398750 N 8.672434 E"
                     /collection_date="2015-04-15"
WGS         VAFV01000001-VAFV01000147
WGS_SCAFLD  NZ_VAFV01000001-NZ_VAFV01000147
//
LOCUS       NZ_VAGV01000000      3921795 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Acinetobacter baumannii strain Aci00851 isolate Aci00851, whole
            genome shotgun sequencing project.
ACCESSION   NZ_VAGV00000000
VERSION     NZ_VAGV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5396118
            Assembly: GCF_005819635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Acinetobacter baumannii
  ORGANISM  Acinetobacter baumannii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Moraxellales; Moraxellaceae; Acinetobacter; Acinetobacter
            calcoaceticus/baumannii complex.
REFERENCE   1  (bases 1 to 3921795)
  AUTHORS   Eigenbrod,T., Reuter,S., Gross,A., Kocer,K., Guenther,F.,
            Zimmermann,S., Heeg,K., Mutters,N.T. and Nurjadi,D.
  TITLE     Molecular characterization of carbapenem-resistant Acinetobacter
            baumannii using whole-genome sequencing revealed missed
            transmission events, Germany, 2012-2015
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3921795)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAY-2019) Institute for Infection Prevention and
            Hospital Epidemiology, Medical Center University of Freiburg,
            Breisacher Strasse 115B, Freiburg 79106, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAGV00000000.1.
            The Acinetobacter baumannii whole genome shotgun (WGS) project has
            the project accession NZ_VAGV00000000.  This version of the project
            (01) has the accession number NZ_VAGV01000000, and consists of
            sequences VAGV01000001-VAGV01000068.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 68x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005819635.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:00:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,808
            CDSs (total)                      :: 3,730
            Genes (coding)                    :: 3,651
            CDSs (with protein)               :: 3,651
            Genes (RNA)                       :: 78
            rRNAs                             :: 4, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3, 1, 4 (5S, 16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 79
            CDSs (without protein)            :: 79
            Pseudo Genes (ambiguous residues) :: 0 of 79
            Pseudo Genes (frameshifted)       :: 16 of 79
            Pseudo Genes (incomplete)         :: 53 of 79
            Pseudo Genes (internal stop)      :: 13 of 79
            Pseudo Genes (multiple problems)  :: 3 of 79
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3921795
                     /organism="Acinetobacter baumannii"
                     /mol_type="genomic DNA"
                     /strain="Aci00851"
                     /isolate="Aci00851"
                     /isolation_source="wound swab"
                     /host="Homo sapiens"
                     /bio_material="wound swab"
                     /db_xref="taxon:470"
                     /geo_loc_name="Germany"
                     /lat_lon="49.398750 N 8.672434 E"
                     /collection_date="2012-08-07"
WGS         VAGV01000001-VAGV01000068
WGS_SCAFLD  NZ_VAGV01000001-NZ_VAGV01000068
//
LOCUS       NZ_JAAQQO010000000   4559863 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Aeromonas veronii strain NK01, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAAQQO000000000
VERSION     NZ_JAAQQO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14381434
            Assembly: GCF_012029545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas veronii (Aeromonas ichthiosmia)
  ORGANISM  Aeromonas veronii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (bases 1 to 4559863)
  AUTHORS   Sakulworakan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2020) Microbiology, Chulalongkorn University, 254
            Phayathai Rd. Wangmai, Patumwan, Bangkok 10330, Thailand
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAAQQO000000000.1.
            The Aeromonas veronii whole genome shotgun (WGS) project has the
            project accession NZ_JAAQQO000000000.  This version of the project
            (01) has the accession number NZ_JAAQQO010000000, and consists of
            sequences JAAQQO010000001-JAAQQO010000095.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from FID-RU Chulalongkorn
            University.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: FEB-2018
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 70.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_012029545.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:23:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,270
            CDSs (total)                      :: 4,129
            Genes (coding)                    :: 4,054
            CDSs (with protein)               :: 4,054
            Genes (RNA)                       :: 141
            rRNAs                             :: 11, 6, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 5, 7 (5S, 16S, 23S)
            tRNAs                             :: 111
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 31 of 75
            Pseudo Genes (incomplete)         :: 54 of 75
            Pseudo Genes (internal stop)      :: 16 of 75
            Pseudo Genes (multiple problems)  :: 23 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4559863
                     /organism="Aeromonas veronii"
                     /mol_type="genomic DNA"
                     /strain="NK01"
                     /host="Oreochromis sp."
                     /db_xref="taxon:654"
                     /geo_loc_name="Thailand: Nong Khai"
                     /collection_date="2014-08"
WGS         JAAQQO010000001-JAAQQO010000095
WGS_SCAFLD  NZ_JAAQQO010000001-NZ_JAAQQO010000095
//
LOCUS       NZ_CDVAAE010000000   4739853 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Alteromonas naphthalenivorans isolate MarMAG_094740, whole
            genome shotgun sequencing project.
ACCESSION   NZ_CDVAAE000000000
VERSION     NZ_CDVAAE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120735694
            Assembly: GCF_977633425.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Alteromonas naphthalenivorans (subsurface metagenome)
  ORGANISM  Alteromonas naphthalenivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Alteromonadaceae; Alteromonas/Salinimonas group;
            Alteromonas.
REFERENCE   1  (bases 1 to 4739853)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVAAE000000000.1.
            The Alteromonas naphthalenivorans whole genome shotgun (WGS)
            project has the project accession NZ_CDVAAE000000000.  This version
            of the project (01) has the accession number NZ_CDVAAE010000000,
            and consists of sequences CDVAAE010000001-CDVAAE010000061.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977633425.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 01:43:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,160
            CDSs (total)                      :: 4,104
            Genes (coding)                    :: 4,067
            CDSs (with protein)               :: 4,067
            Genes (RNA)                       :: 56
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 8 of 37
            Pseudo Genes (incomplete)         :: 27 of 37
            Pseudo Genes (internal stop)      :: 7 of 37
            Pseudo Genes (multiple problems)  :: 5 of 37
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4739853
                     /organism="Alteromonas naphthalenivorans"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_094740"
                     /db_xref="taxon:715451"
                     /environmental_sample
                     /geo_loc_name="Atlantic Ocean"
                     /collection_date="2014-04-10"
                     /metagenome_source="subsurface metagenome"
                     /metagenomic
WGS         CDVAAE010000001-CDVAAE010000061
WGS_SCAFLD  NZ_CDVAAE010000001-NZ_CDVAAE010000061
//
LOCUS       NZ_JAOTOC010000000   3709372 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Bacillus altitudinis strain 1.4, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAOTOC000000000
VERSION     NZ_JAOTOC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN31109462
            Assembly: GCF_037454335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus altitudinis
  ORGANISM  Bacillus altitudinis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (bases 1 to 3709372)
  AUTHORS   Bach,E., Jankoski,P.R., Carvalho,J.B., Oliveira,R., Omori,W.P.,
            Passaglia,L.M.P. and Motta,A.S.
  TITLE     Bacillus altitudinis 1.4 genome announcement
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3709372)
  AUTHORS   Bach,E., Jankoski,P.R., Carvalho,J.B., Oliveira,R., Omori,W.P.,
            Passaglia,L.M.P. and Motta,A.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2022) Genetics, UFRGS, Av. Bento Goncalves, 9500,
            Porto Alegre 91501-970, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAOTOC000000000.1.
            The Bacillus altitudinis whole genome shotgun (WGS) project has the
            project accession NZ_JAOTOC000000000.  This version of the project
            (01) has the accession number NZ_JAOTOC010000000, and consists of
            sequences JAOTOC010000001-JAOTOC010000024.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Amanda de Souza da Motta.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: JUL-2022
            Assembly Method        :: SPAdes v. 3.13.1; A5 v. 13/01/2014;
                                      IDBA-UD v. 1.1.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 48.93x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037454335.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:35:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,862
            CDSs (total)                      :: 3,768
            Genes (coding)                    :: 3,730
            CDSs (with protein)               :: 3,730
            Genes (RNA)                       :: 94
            rRNAs                             :: 9, 6, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5, 5, 1 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 38
            CDSs (without protein)            :: 38
            Pseudo Genes (ambiguous residues) :: 0 of 38
            Pseudo Genes (frameshifted)       :: 15 of 38
            Pseudo Genes (incomplete)         :: 26 of 38
            Pseudo Genes (internal stop)      :: 5 of 38
            Pseudo Genes (multiple problems)  :: 7 of 38
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3709372
                     /organism="Bacillus altitudinis"
                     /mol_type="genomic DNA"
                     /strain="1.4"
                     /isolation_source="wetland sediment"
                     /db_xref="taxon:293387"
                     /geo_loc_name="Brazil: Sao Leopoldo"
                     /lat_lon="29.759831 S 51.134323 W"
                     /collection_date="2016-12"
WGS         JAOTOC010000001-JAOTOC010000024
WGS_SCAFLD  NZ_JAOTOC010000001-NZ_JAOTOC010000024
//
LOCUS       NZ_SRJG01000000      4283732 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Aliivibrio fischeri strain ES401, whole genome shotgun sequencing
            project.
ACCESSION   NZ_SRJG00000000
VERSION     NZ_SRJG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11099797
            Assembly: GCF_004685055.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aliivibrio fischeri (Vibrio fischeri)
  ORGANISM  Aliivibrio fischeri
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Aliivibrio.
REFERENCE   1  (bases 1 to 4283732)
  AUTHORS   Bultman,K.M., Septer,A.N. and Mandel,M.J.
  TITLE     Draft genome sequence of Vibrio fischeri ES401
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4283732)
  AUTHORS   Bultman,K.M., Septer,A.N. and Mandel,M.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-APR-2019) Medical Microbiology & Immunology,
            University of Wisconsin-Madison, 1550 Linden Drive, Madison, WI
            53706, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SRJG00000000.1.
            The Aliivibrio fischeri whole genome shotgun (WGS) project has the
            project accession NZ_SRJG00000000.  This version of the project
            (01) has the accession number NZ_SRJG01000000, and consists of
            sequences SRJG01000001-SRJG01000006.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 165.0x
            Sequencing Technology  :: Illumina MiSeq; PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004685055.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:47:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,973
            CDSs (total)                      :: 3,847
            Genes (coding)                    :: 3,808
            CDSs (with protein)               :: 3,808
            Genes (RNA)                       :: 126
            rRNAs                             :: 7, 4, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 4, 3 (5S, 16S, 23S)
            tRNAs                             :: 108
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 17 of 39
            Pseudo Genes (incomplete)         :: 19 of 39
            Pseudo Genes (internal stop)      :: 8 of 39
            Pseudo Genes (multiple problems)  :: 5 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4283732
                     /organism="Aliivibrio fischeri"
                     /mol_type="genomic DNA"
                     /strain="ES401"
                     /host="Euprymna scolopes"
                     /db_xref="taxon:668"
                     /geo_loc_name="USA: Hawaii, Oahu, Maunalua Bay"
                     /collection_date="1990-09-29"
                     /collected_by="Ned Ruby"
WGS         SRJG01000001-SRJG01000006
WGS_SCAFLD  NZ_SRJG01000001-NZ_SRJG01000006
//
LOCUS       NZ_JABJZS010000000   2137177 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Aggregatibacter actinomycetemcomitans strain 640G, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JABJZS000000000
VERSION     NZ_JABJZS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14969753
            Assembly: GCF_021310045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aggregatibacter actinomycetemcomitans
  ORGANISM  Aggregatibacter actinomycetemcomitans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Aggregatibacter.
REFERENCE   1  (bases 1 to 2137177)
  AUTHORS   Nedergaard,S., Jensen,A.B., Haubek,D. and Norskov-Lauritsen,N.
  TITLE     Multilocus Sequence Typing of Aggregatibacter actinomycetemcomitans
            Competently Depicts the Population Structure of the Species
  JOURNAL   Microbiol Spectr 9 (3), e0108521 (2021)
   PUBMED   34908433
REFERENCE   2  (bases 1 to 2137177)
  AUTHORS   Nedergaard,S. and Noerskov-Lauritsen,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-MAY-2020) Department of Clinical Microbiology, Aarhus
            University Hospital, Palle Juul-Jensens Boulevard 99, Aarhus N
            8200, Denmark
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JABJZS000000000.1.
            The Aggregatibacter actinomycetemcomitans whole genome shotgun
            (WGS) project has the project accession NZ_JABJZS000000000.  This
            version of the project (01) has the accession number
            NZ_JABJZS010000000, and consists of sequences
            JABJZS010000001-JABJZS010000031.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler: v. 0.4.7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 97x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_021310045.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:23:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,126
            CDSs (total)                      :: 2,072
            Genes (coding)                    :: 1,982
            CDSs (with protein)               :: 1,982
            Genes (RNA)                       :: 54
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 90
            CDSs (without protein)            :: 90
            Pseudo Genes (ambiguous residues) :: 0 of 90
            Pseudo Genes (frameshifted)       :: 51 of 90
            Pseudo Genes (incomplete)         :: 39 of 90
            Pseudo Genes (internal stop)      :: 20 of 90
            Pseudo Genes (multiple problems)  :: 17 of 90
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2137177
                     /organism="Aggregatibacter actinomycetemcomitans"
                     /mol_type="genomic DNA"
                     /strain="640G"
                     /isolation_source="subgingival plaque"
                     /host="Homo sapiens"
                     /db_xref="taxon:714"
                     /geo_loc_name="Ghana"
                     /collection_date="2009"
                     /collected_by="Umeaa University, Sweden, Rolf Claesson"
WGS         JABJZS010000001-JABJZS010000031
WGS_SCAFLD  NZ_JABJZS010000001-NZ_JABJZS010000031
//
LOCUS       NZ_CDVLZU010000000   4484034 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Aurantimonas coralicida isolate MarMAG_114080, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVLZU000000000
VERSION     NZ_CDVLZU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737212
            Assembly: GCF_977714485.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Aurantimonas coralicida (marine sediment metagenome)
  ORGANISM  Aurantimonas coralicida
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Aurantimonadaceae; Aurantimonas.
REFERENCE   1  (bases 1 to 4484034)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVLZU000000000.1.
            The Aurantimonas coralicida whole genome shotgun (WGS) project has
            the project accession NZ_CDVLZU000000000.  This version of the
            project (01) has the accession number NZ_CDVLZU010000000, and
            consists of sequences CDVLZU010000001-CDVLZU010000018.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977714485.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:36:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,276
            CDSs (total)                      :: 4,229
            Genes (coding)                    :: 4,165
            CDSs (with protein)               :: 4,165
            Genes (RNA)                       :: 47
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 20 of 64
            Pseudo Genes (incomplete)         :: 53 of 64
            Pseudo Genes (internal stop)      :: 6 of 64
            Pseudo Genes (multiple problems)  :: 13 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4484034
                     /organism="Aurantimonas coralicida"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_114080"
                     /db_xref="taxon:182270"
                     /environmental_sample
                     /geo_loc_name="Atlantic Ocean"
                     /metagenome_source="marine sediment metagenome"
                     /metagenomic
WGS         CDVLZU010000001-CDVLZU010000018
WGS_SCAFLD  NZ_CDVLZU010000001-NZ_CDVLZU010000018
//
LOCUS       NZ_CDVFOP010000000   2947257 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Alloalcanivorax venustensis isolate MarMAG_001789, whole
            genome shotgun sequencing project.
ACCESSION   NZ_CDVFOP000000000
VERSION     NZ_CDVFOP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737362
            Assembly: GCF_977671005.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Alloalcanivorax venustensis (marine metagenome)
  ORGANISM  Alloalcanivorax venustensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Alcanivoracaceae; Alloalcanivorax.
REFERENCE   1  (bases 1 to 2947257)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVFOP000000000.1.
            The Alloalcanivorax venustensis whole genome shotgun (WGS) project
            has the project accession NZ_CDVFOP000000000.  This version of the
            project (01) has the accession number NZ_CDVFOP010000000, and
            consists of sequences CDVFOP010000001-CDVFOP010000255.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977671005.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:24:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,953
            CDSs (total)                      :: 2,915
            Genes (coding)                    :: 2,858
            CDSs (with protein)               :: 2,858
            Genes (RNA)                       :: 38
            tRNAs                             :: 34
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 57
            CDSs (without protein)            :: 57
            Pseudo Genes (ambiguous residues) :: 0 of 57
            Pseudo Genes (frameshifted)       :: 0 of 57
            Pseudo Genes (incomplete)         :: 56 of 57
            Pseudo Genes (internal stop)      :: 1 of 57
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2947257
                     /organism="Alloalcanivorax venustensis"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_001789"
                     /isolation_source="Mariana Trench, particle-associated
                     microorganism abyssal water (4,000 m)"
                     /db_xref="taxon:172371"
                     /environmental_sample
                     /geo_loc_name="Pacific Ocean"
                     /collection_date="2016-09-15"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVFOP010000001-CDVFOP010000255
WGS_SCAFLD  NZ_CDVFOP010000001-NZ_CDVFOP010000255
//
LOCUS       NZ_CDVOPK010000000   4621496 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Aurantimonas coralicida isolate MarMAG_114079, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVOPK000000000
VERSION     NZ_CDVOPK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737193
            Assembly: GCF_977732075.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Aurantimonas coralicida (marine sediment metagenome)
  ORGANISM  Aurantimonas coralicida
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Aurantimonadaceae; Aurantimonas.
REFERENCE   1  (bases 1 to 4621496)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVOPK000000000.1.
            The Aurantimonas coralicida whole genome shotgun (WGS) project has
            the project accession NZ_CDVOPK000000000.  This version of the
            project (01) has the accession number NZ_CDVOPK010000000, and
            consists of sequences CDVOPK010000001-CDVOPK010000034.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977732075.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:40:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,433
            CDSs (total)                      :: 4,380
            Genes (coding)                    :: 4,324
            CDSs (with protein)               :: 4,324
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 56
            CDSs (without protein)            :: 56
            Pseudo Genes (ambiguous residues) :: 0 of 56
            Pseudo Genes (frameshifted)       :: 17 of 56
            Pseudo Genes (incomplete)         :: 44 of 56
            Pseudo Genes (internal stop)      :: 6 of 56
            Pseudo Genes (multiple problems)  :: 10 of 56
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4621496
                     /organism="Aurantimonas coralicida"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_114079"
                     /db_xref="taxon:182270"
                     /environmental_sample
                     /geo_loc_name="Atlantic Ocean"
                     /metagenome_source="marine sediment metagenome"
                     /metagenomic
WGS         CDVOPK010000001-CDVOPK010000034
WGS_SCAFLD  NZ_CDVOPK010000001-NZ_CDVOPK010000034
//
LOCUS       NZ_WPHL01000000      5771196 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain CG1000, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WPHL00000000
VERSION     NZ_WPHL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13451337
            Assembly: GCF_009744005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5771196)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Whole-genome sequencing of Allorhizobium vitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5771196)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2019) School of Life and Environmental Sciences,
            Deakin University, 75 Pidgons Road, Waurn Ponds, Victoria 3216,
            Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WPHL00000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_WPHL00000000.  This version of the project
            (01) has the accession number NZ_WPHL01000000, and consists of
            sequences WPHL01000001-WPHL01000063.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 28x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009744005.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:50:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,276
            CDSs (total)                      :: 5,221
            Genes (coding)                    :: 5,111
            CDSs (with protein)               :: 5,111
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 110
            CDSs (without protein)            :: 110
            Pseudo Genes (ambiguous residues) :: 0 of 110
            Pseudo Genes (frameshifted)       :: 41 of 110
            Pseudo Genes (incomplete)         :: 84 of 110
            Pseudo Genes (internal stop)      :: 12 of 110
            Pseudo Genes (multiple problems)  :: 26 of 110
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5771196
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="CG1000"
                     /isolation_source="Grape cutting"
                     /host="Vitis vinifera"
                     /db_xref="taxon:373"
                     /geo_loc_name="Australia: Loxton, South Australia"
                     /collection_date="1987"
                     /collected_by="Tom Burr"
WGS         WPHL01000001-WPHL01000063
WGS_SCAFLD  NZ_WPHL01000001-NZ_WPHL01000063
//
LOCUS       NZ_DATJEB010000000   5240723 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Agriterribacter sp. isolate SMAG_U15422, whole genome shotgun
            sequencing project.
ACCESSION   NZ_DATJEB000000000
VERSION     NZ_DATJEB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37937000
            Sequence Read Archive: SRR8931236
            Assembly: GCF_035497235.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq; TPA:assembly.
SOURCE      Agriterribacter sp. (soil metagenome)
  ORGANISM  Agriterribacter sp.
            Bacteria; Pseudomonadati; Bacteroidota; Chitinophagia;
            Chitinophagales; Chitinophagaceae; Agriterribacter.
REFERENCE   1  (bases 1 to 5240723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. doi:
            10.1038/s41467-023-44072-7. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5240723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            DATJEB000000000.1.
            The Agriterribacter sp. whole genome shotgun (WGS) project has the
            project accession NZ_DATJEB000000000.  This version of the project
            (01) has the accession number NZ_DATJEB010000000, and consists of
            sequences DATJEB010000001-DATJEB010000062.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_035497235.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:35:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,347
            CDSs (total)                      :: 4,300
            Genes (coding)                    :: 4,273
            CDSs (with protein)               :: 4,273
            Genes (RNA)                       :: 47
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 27
            CDSs (without protein)            :: 27
            Pseudo Genes (ambiguous residues) :: 0 of 27
            Pseudo Genes (frameshifted)       :: 4 of 27
            Pseudo Genes (incomplete)         :: 22 of 27
            Pseudo Genes (internal stop)      :: 3 of 27
            Pseudo Genes (multiple problems)  :: 2 of 27
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5240723
                     /organism="Agriterribacter sp."
                     /mol_type="genomic DNA"
                     /isolate="SMAG_U15422"
                     /isolation_source="soil"
                     /db_xref="taxon:2821509"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="43 N 92.5 W"
                     /metagenome_source="soil metagenome"
                     /metagenomic
WGS         DATJEB010000001-DATJEB010000062
WGS_SCAFLD  NZ_DATJEB010000001-NZ_DATJEB010000062
//
LOCUS       NZ_JBWBVF010000000   4297935 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Anaerobacillus sp. 63XJN7_5_ISO-PGPR-S23-430, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBWBVF000000000
VERSION     NZ_JBWBVF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449746
            Assembly: GCF_056173695.1
KEYWORDS    WGS; RefSeq.
SOURCE      Anaerobacillus sp. 63XJN7_5_ISO-PGPR-S23-430
  ORGANISM  Anaerobacillus sp. 63XJN7_5_ISO-PGPR-S23-430
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Anaerobacillus.
REFERENCE   1  (bases 1 to 4297935)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4297935)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBVF000000000.1.
            The Anaerobacillus sp. 63XJN7_5_ISO-PGPR-S23-430 whole genome
            shotgun (WGS) project has the project accession NZ_JBWBVF000000000.
            This version of the project (01) has the accession number
            NZ_JBWBVF010000000, and consists of sequence JBWBVF010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 285.2x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173695.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:44:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,418
            CDSs (total)                      :: 4,297
            Genes (coding)                    :: 4,273
            CDSs (with protein)               :: 4,273
            Genes (RNA)                       :: 121
            rRNAs                             :: 9, 9, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 9 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 4 of 24
            Pseudo Genes (incomplete)         :: 17 of 24
            Pseudo Genes (internal stop)      :: 4 of 24
            Pseudo Genes (multiple problems)  :: 1 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4297935
                     /organism="Anaerobacillus sp. 63XJN7_5_ISO-PGPR-S23-430"
                     /mol_type="genomic DNA"
                     /strain="63XJN7_5_ISO-PGPR-S23-430"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569806"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBVF010000001
WGS_SCAFLD  NZ_CM149686
//
LOCUS       NZ_MAVS02000000      6139354 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain AB3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MAVS00000000
VERSION     NZ_MAVS00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05366381
            Assembly: GCF_001758305.2
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 6139354)
  AUTHORS   Gan,H.M. and Savka,M.A.
  TITLE     Whole-genome sequencing of Allorhizobium vitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6139354)
  AUTHORS   Gan,H.M. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-NOV-2019) School of Life and Environmental Sciences,
            Deakin University, 75 Pidgons Road, Waurn Ponds, Victoria 3216,
            Australia
REFERENCE   3  (bases 1 to 6139354)
  AUTHORS   Lin,T.N., Gan,H.M. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-JUL-2016) School of Science, Monash University
            Malaysia, Jalan Lagoon Selatan, Bandar Sunway, Selangor 47500,
            Malaysia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MAVS00000000.2.
            
            On Dec 14, 2019 this sequence version replaced NZ_MAVS00000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_MAVS00000000.  This version of the project
            (02) has the accession number NZ_MAVS02000000, and consists of
            sequences MAVS02000001-MAVS02000076.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Professor Michael A. Savka,
            Rochester Institute of Technology.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. v3.13.0
            Assembly Name          :: AB3_v2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001758305.2-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:53:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,576
            CDSs (total)                      :: 5,522
            Genes (coding)                    :: 5,399
            CDSs (with protein)               :: 5,399
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 35 of 123
            Pseudo Genes (incomplete)         :: 102 of 123
            Pseudo Genes (internal stop)      :: 14 of 123
            Pseudo Genes (multiple problems)  :: 23 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6139354
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="AB3"
                     /isolation_source="Crown gall tumor"
                     /host="Vitis vinifera"
                     /db_xref="taxon:373"
                     /geo_loc_name="Hungary"
                     /collection_date="1982"
WGS         MAVS02000001-MAVS02000076
WGS_SCAFLD  NZ_MAVS02000001-NZ_MAVS02000076
//
LOCUS       NZ_JBWBVG010000000   4267287 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Anaerobacillus sp. 63XJN7_4_ISO-PGPR-S23-413, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBWBVG000000000
VERSION     NZ_JBWBVG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449745
            Assembly: GCF_056173725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Anaerobacillus sp. 63XJN7_4_ISO-PGPR-S23-413
  ORGANISM  Anaerobacillus sp. 63XJN7_4_ISO-PGPR-S23-413
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Anaerobacillus.
REFERENCE   1  (bases 1 to 4267287)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4267287)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBVG000000000.1.
            The Anaerobacillus sp. 63XJN7_4_ISO-PGPR-S23-413 whole genome
            shotgun (WGS) project has the project accession NZ_JBWBVG000000000.
            This version of the project (01) has the accession number
            NZ_JBWBVG010000000, and consists of sequence JBWBVG010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 66.8x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173725.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:47:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,399
            CDSs (total)                      :: 4,278
            Genes (coding)                    :: 4,245
            CDSs (with protein)               :: 4,245
            Genes (RNA)                       :: 121
            rRNAs                             :: 9, 9, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 9 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 33
            CDSs (without protein)            :: 33
            Pseudo Genes (ambiguous residues) :: 0 of 33
            Pseudo Genes (frameshifted)       :: 6 of 33
            Pseudo Genes (incomplete)         :: 24 of 33
            Pseudo Genes (internal stop)      :: 4 of 33
            Pseudo Genes (multiple problems)  :: 1 of 33
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4267287
                     /organism="Anaerobacillus sp. 63XJN7_4_ISO-PGPR-S23-413"
                     /mol_type="genomic DNA"
                     /strain="63XJN7_4_ISO-PGPR-S23-413"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569805"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBVG010000001
WGS_SCAFLD  NZ_CM149688
//
LOCUS       NZ_JAALXZ010000000   5994014 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain T267/94, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAALXZ000000000
VERSION     NZ_JAALXZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14165455
            Assembly: GCF_013317345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5994014)
  AUTHORS   Weisberg,A.J., Davis,E.W. 2nd, Tabima,J., Belcher,M.S., Miller,M.,
            Kuo,C.H., Loper,J.E., Grunwald,N.J., Putnam,M.L. and Chang,J.H.
  TITLE     Unexpected conservation and global transmission of agrobacterial
            virulence plasmids
  JOURNAL   Science 368 (6495) (2020)
   PUBMED   32499412
REFERENCE   2  (bases 1 to 5994014)
  AUTHORS   Weisberg,A.J., Davis,E.W. II, Tabima,J.R., Belcher,M.S., Miller,M.,
            Kuo,C.-H., Loper,J.E., Grunwald,N.J., Putnam,M.L. and Chang,J.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-FEB-2020) Botany and Plant Pathology, Oregon State
            University, 2082 Cordley Hall, Oregon State University, Corvallis,
            OR 97330, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAALXZ000000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_JAALXZ000000000.  This version of the project
            (01) has the accession number NZ_JAALXZ010000000, and consists of
            sequences JAALXZ010000001-JAALXZ010000035.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 63x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013317345.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:49:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,552
            CDSs (total)                      :: 5,495
            Genes (coding)                    :: 5,372
            CDSs (with protein)               :: 5,372
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 50 of 123
            Pseudo Genes (incomplete)         :: 91 of 123
            Pseudo Genes (internal stop)      :: 20 of 123
            Pseudo Genes (multiple problems)  :: 35 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5994014
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="T267/94"
                     /host="Grape"
                     /db_xref="taxon:373"
                     /collection_date="1994"
WGS         JAALXZ010000001-JAALXZ010000035
WGS_SCAFLD  NZ_JAALXZ010000001-NZ_JAALXZ010000035
//
LOCUS       NZ_JAALYF010000000   6056049 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain BM37/95, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAALYF000000000
VERSION     NZ_JAALYF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14165430
            Assembly: GCF_013317475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 6056049)
  AUTHORS   Weisberg,A.J., Davis,E.W. 2nd, Tabima,J., Belcher,M.S., Miller,M.,
            Kuo,C.H., Loper,J.E., Grunwald,N.J., Putnam,M.L. and Chang,J.H.
  TITLE     Unexpected conservation and global transmission of agrobacterial
            virulence plasmids
  JOURNAL   Science 368 (6495) (2020)
   PUBMED   32499412
REFERENCE   2  (bases 1 to 6056049)
  AUTHORS   Weisberg,A.J., Davis,E.W. II, Tabima,J.R., Belcher,M.S., Miller,M.,
            Kuo,C.-H., Loper,J.E., Grunwald,N.J., Putnam,M.L. and Chang,J.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-FEB-2020) Botany and Plant Pathology, Oregon State
            University, 2082 Cordley Hall, Oregon State University, Corvallis,
            OR 97330, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAALYF000000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_JAALYF000000000.  This version of the project
            (01) has the accession number NZ_JAALYF010000000, and consists of
            sequences JAALYF010000001-JAALYF010000065.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 101x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013317475.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:55:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,489
            CDSs (total)                      :: 5,432
            Genes (coding)                    :: 5,293
            CDSs (with protein)               :: 5,293
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 139
            CDSs (without protein)            :: 139
            Pseudo Genes (ambiguous residues) :: 0 of 139
            Pseudo Genes (frameshifted)       :: 47 of 139
            Pseudo Genes (incomplete)         :: 108 of 139
            Pseudo Genes (internal stop)      :: 15 of 139
            Pseudo Genes (multiple problems)  :: 28 of 139
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6056049
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="BM37/95"
                     /host="Grape"
                     /db_xref="taxon:373"
                     /collection_date="1995"
WGS         JAALYF010000001-JAALYF010000065
WGS_SCAFLD  NZ_JAALYF010000001-NZ_JAALYF010000065
//
LOCUS       NZ_WPHP01000000      5911395 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain CG957, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WPHP00000000
VERSION     NZ_WPHP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13451333
            Assembly: GCF_009744115.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5911395)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Whole-genome sequencing of Allorhizobium vitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5911395)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2019) School of Life and Environmental Sciences,
            Deakin University, 75 Pidgons Road, Waurn Ponds, Victoria 3216,
            Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WPHP00000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_WPHP00000000.  This version of the project
            (01) has the accession number NZ_WPHP01000000, and consists of
            sequences WPHP01000001-WPHP01000111.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 61x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009744115.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:56:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,396
            CDSs (total)                      :: 5,341
            Genes (coding)                    :: 5,217
            CDSs (with protein)               :: 5,217
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 124
            CDSs (without protein)            :: 124
            Pseudo Genes (ambiguous residues) :: 0 of 124
            Pseudo Genes (frameshifted)       :: 48 of 124
            Pseudo Genes (incomplete)         :: 90 of 124
            Pseudo Genes (internal stop)      :: 12 of 124
            Pseudo Genes (multiple problems)  :: 23 of 124
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5911395
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="CG957"
                     /isolation_source="Grape gall"
                     /host="Vitis vinifera"
                     /db_xref="taxon:373"
                     /geo_loc_name="Afghanistan"
                     /collection_date="1984"
                     /collected_by="Ercolani"
WGS         WPHP01000001-WPHP01000111
WGS_SCAFLD  NZ_WPHP01000001-NZ_WPHP01000111
//
LOCUS       NZ_PDKW01000000      7991891 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Azospirillum palustre strain B2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_PDKW00000000
VERSION     NZ_PDKW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07776893
            Assembly: GCF_002573965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Azospirillum palustre
  ORGANISM  Azospirillum palustre
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodospirillales; Azospirillaceae; Azospirillum.
REFERENCE   1  (bases 1 to 7991891)
  AUTHORS   Tikhonova,E.N., Grouzdev,D.S. and Kravchenko,I.K.
  TITLE     Azospirillum palustre sp. nov., a methylotrophic nitrogen-fixing
            species isolated from raised bog
  JOURNAL   Int J Syst Evol Microbiol 69 (9), 2787-2793 (2019)
   PUBMED   31237535
REFERENCE   2  (bases 1 to 7991891)
  AUTHORS   Kravchenko,I.K. and Grouzdev,D.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-OCT-2017) Institute of Bioengineering, Research
            Center of Biotechnology RAS, Leninsky Ave, Moscow 117312, Russia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PDKW00000000.1.
            The Azospirillum palustre whole genome shotgun (WGS) project has
            the project accession NZ_PDKW00000000.  This version of the project
            (01) has the accession number NZ_PDKW01000000, and consists of
            sequences PDKW01000001-PDKW01000043.
            Bacteria and source DNA available from Kravchenko Irina, Research
            Center of Biotechnology RAS Russia  http://www.fbras.ru.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: SEP-2017
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002573965.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:44:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,175
            CDSs (total)                      :: 7,102
            Genes (coding)                    :: 7,001
            CDSs (with protein)               :: 7,001
            Genes (RNA)                       :: 73
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 101
            CDSs (without protein)            :: 101
            Pseudo Genes (ambiguous residues) :: 0 of 101
            Pseudo Genes (frameshifted)       :: 23 of 101
            Pseudo Genes (incomplete)         :: 85 of 101
            Pseudo Genes (internal stop)      :: 13 of 101
            Pseudo Genes (multiple problems)  :: 17 of 101
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7991891
                     /organism="Azospirillum palustre"
                     /mol_type="genomic DNA"
                     /strain="B2"
                     /isolation_source="raised bog"
                     /type_material="type strain of Azospirillum palustre"
                     /db_xref="taxon:2044885"
                     /lab_host="INMI RAS"
                     /geo_loc_name="Russia: Tver region Sosvyatskoe"
                     /lat_lon="56.15 N 32.17 E"
                     /collection_date="2000-08-10"
                     /collected_by="Sirin Andrey Institute of the Forest
                     Science, RAS Russia"
                     /identified_by="Kravchenko I, Doroshenko E"
WGS         PDKW01000001-PDKW01000043
WGS_SCAFLD  NZ_PDKW01000001-NZ_PDKW01000043
//
LOCUS       NZ_WPHS01000000      5770265 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain CG475, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WPHS00000000
VERSION     NZ_WPHS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13451330
            Assembly: GCF_009744125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5770265)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Whole-genome sequencing of Allorhizobium vitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5770265)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2019) School of Life and Environmental Sciences,
            Deakin University, 75 Pidgons Road, Waurn Ponds, Victoria 3216,
            Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WPHS00000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_WPHS00000000.  This version of the project
            (01) has the accession number NZ_WPHS01000000, and consists of
            sequences WPHS01000001-WPHS01000045.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 51x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009744125.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:53:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,188
            CDSs (total)                      :: 5,132
            Genes (coding)                    :: 5,043
            CDSs (with protein)               :: 5,043
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 89
            CDSs (without protein)            :: 89
            Pseudo Genes (ambiguous residues) :: 0 of 89
            Pseudo Genes (frameshifted)       :: 36 of 89
            Pseudo Genes (incomplete)         :: 69 of 89
            Pseudo Genes (internal stop)      :: 13 of 89
            Pseudo Genes (multiple problems)  :: 24 of 89
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5770265
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="CG475"
                     /isolation_source="Grape Root"
                     /host="Vitis vinifera"
                     /db_xref="taxon:373"
                     /geo_loc_name="USA: New Mexico"
                     /collected_by="Tom Burr"
WGS         WPHS01000001-WPHS01000045
WGS_SCAFLD  NZ_WPHS01000001-NZ_WPHS01000045
//
LOCUS       NZ_WVRP01000000      4562071 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Aeromonas veronii strain CMF, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WVRP00000000
VERSION     NZ_WVRP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13631568
            Assembly: GCF_009834905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas veronii (Aeromonas ichthiosmia)
  ORGANISM  Aeromonas veronii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (bases 1 to 4562071)
  AUTHORS   Mandal,N.C., Banarjee,S. and Mandal,S.
  TITLE     Study of antifungal gene from a novel Aeromonas strain
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4562071)
  AUTHORS   Mandal,N.C., Banarjee,S. and Mandal,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-DEC-2019) Botany, Visva-Bharati University,
            Shantiniketan, Bolpur 731235, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WVRP00000000.1.
            The Aeromonas veronii whole genome shotgun (WGS) project has the
            project accession NZ_WVRP00000000.  This version of the project
            (01) has the accession number NZ_WVRP01000000, and consists of
            sequences WVRP01000001-WVRP01000200.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: DEC-2019
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 145.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009834905.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:55:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,291
            CDSs (total)                      :: 4,195
            Genes (coding)                    :: 4,127
            CDSs (with protein)               :: 4,127
            Genes (RNA)                       :: 96
            rRNAs                             :: 2, 5, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 5, 4 (16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 13 of 68
            Pseudo Genes (incomplete)         :: 58 of 68
            Pseudo Genes (internal stop)      :: 10 of 68
            Pseudo Genes (multiple problems)  :: 10 of 68
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4562071
                     /organism="Aeromonas veronii"
                     /mol_type="genomic DNA"
                     /strain="CMF"
                     /isolation_source="Insect gut"
                     /db_xref="taxon:654"
                     /geo_loc_name="India"
                     /collection_date="2019-10"
WGS         WVRP01000001-WVRP01000200
WGS_SCAFLD  NZ_WVRP01000001-NZ_WVRP01000200
//
LOCUS       NZ_CDULKF010000000   4299641 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Alteromonas mediterranea isolate MarMAG_094608, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDULKF000000000
VERSION     NZ_CDULKF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120722576
            Assembly: GCF_977534665.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Alteromonas mediterranea (subsurface metagenome)
  ORGANISM  Alteromonas mediterranea
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Alteromonadaceae; Alteromonas/Salinimonas group;
            Alteromonas.
REFERENCE   1  (bases 1 to 4299641)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDULKF000000000.1.
            The Alteromonas mediterranea whole genome shotgun (WGS) project has
            the project accession NZ_CDULKF000000000.  This version of the
            project (01) has the accession number NZ_CDULKF010000000, and
            consists of sequences CDULKF010000001-CDULKF010000040.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977534665.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 01:30:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,694
            CDSs (total)                      :: 3,633
            Genes (coding)                    :: 3,616
            CDSs (with protein)               :: 3,616
            Genes (RNA)                       :: 61
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 17
            CDSs (without protein)            :: 17
            Pseudo Genes (ambiguous residues) :: 0 of 17
            Pseudo Genes (frameshifted)       :: 5 of 17
            Pseudo Genes (incomplete)         :: 14 of 17
            Pseudo Genes (internal stop)      :: 2 of 17
            Pseudo Genes (multiple problems)  :: 3 of 17
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4299641
                     /organism="Alteromonas mediterranea"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_094608"
                     /isolation_source="Water sample released from chimney V59
                     from Kolumbo volcano"
                     /db_xref="taxon:314275"
                     /environmental_sample
                     /geo_loc_name="Greece"
                     /collection_date="2013-09-06"
                     /metagenome_source="subsurface metagenome"
                     /metagenomic
WGS         CDULKF010000001-CDULKF010000040
WGS_SCAFLD  NZ_CDULKF010000001-NZ_CDULKF010000040
//
LOCUS       NZ_MBFE02000000      6398056 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain T1/7, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MBFE00000000
VERSION     NZ_MBFE00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05369610
            Assembly: GCF_001860215.2
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 6398056)
  AUTHORS   Gan,H.M. and Savka,M.A.
  TITLE     Whole-genome sequencing of Allorhizobium vitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6398056)
  AUTHORS   Gan,H.M. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-NOV-2019) School of Life and Environmental Sciences,
            Deakin University, 75 Pidgons Road, Waurn Ponds, Victoria 3216,
            Australia
REFERENCE   3  (bases 1 to 6398056)
  AUTHORS   Lin,T.N., Gan,H.M. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-JUL-2016) School of Science, Monash University
            Malaysia, Jalan Lagoon Selatan, Bandar Sunway, Selangor 47500,
            Malaysia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MBFE00000000.2.
            
            On Dec 14, 2019 this sequence version replaced NZ_MBFE00000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_MBFE00000000.  This version of the project
            (02) has the accession number NZ_MBFE02000000, and consists of
            sequences MBFE02000001-MBFE02000109.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Professor Michael A. Savka,
            Rochester Institute of Technology.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. v3.13.0
            Assembly Name          :: T1-7_v2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 43.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001860215.2-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:05:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,910
            CDSs (total)                      :: 5,854
            Genes (coding)                    :: 5,675
            CDSs (with protein)               :: 5,675
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 179
            CDSs (without protein)            :: 179
            Pseudo Genes (ambiguous residues) :: 0 of 179
            Pseudo Genes (frameshifted)       :: 59 of 179
            Pseudo Genes (incomplete)         :: 141 of 179
            Pseudo Genes (internal stop)      :: 19 of 179
            Pseudo Genes (multiple problems)  :: 36 of 179
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6398056
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="T1/7"
                     /isolation_source="Crown gall tumor"
                     /host="Vitis vinifera"
                     /db_xref="taxon:373"
                     /geo_loc_name="Hungary"
                     /collection_date="2004"
WGS         MBFE02000001-MBFE02000109
WGS_SCAFLD  NZ_MBFE02000001-NZ_MBFE02000109
//
LOCUS       NZ_JAALYB010000000   5893973 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain F2/5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAALYB000000000
VERSION     NZ_JAALYB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14165507
            Assembly: GCF_013317315.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5893973)
  AUTHORS   Weisberg,A.J., Davis,E.W. 2nd, Tabima,J., Belcher,M.S., Miller,M.,
            Kuo,C.H., Loper,J.E., Grunwald,N.J., Putnam,M.L. and Chang,J.H.
  TITLE     Unexpected conservation and global transmission of agrobacterial
            virulence plasmids
  JOURNAL   Science 368 (6495) (2020)
   PUBMED   32499412
REFERENCE   2  (bases 1 to 5893973)
  AUTHORS   Weisberg,A.J., Davis,E.W. II, Tabima,J.R., Belcher,M.S., Miller,M.,
            Kuo,C.-H., Loper,J.E., Grunwald,N.J., Putnam,M.L. and Chang,J.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-FEB-2020) Botany and Plant Pathology, Oregon State
            University, 2082 Cordley Hall, Oregon State University, Corvallis,
            OR 97330, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAALYB000000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_JAALYB000000000.  This version of the project
            (01) has the accession number NZ_JAALYB010000000, and consists of
            sequences JAALYB010000001-JAALYB010000060.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 229x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013317315.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:44:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,344
            CDSs (total)                      :: 5,287
            Genes (coding)                    :: 5,143
            CDSs (with protein)               :: 5,143
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 144
            CDSs (without protein)            :: 144
            Pseudo Genes (ambiguous residues) :: 0 of 144
            Pseudo Genes (frameshifted)       :: 42 of 144
            Pseudo Genes (incomplete)         :: 118 of 144
            Pseudo Genes (internal stop)      :: 21 of 144
            Pseudo Genes (multiple problems)  :: 29 of 144
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5893973
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="F2/5"
                     /host="Grape"
                     /db_xref="taxon:373"
WGS         JAALYB010000001-JAALYB010000060
WGS_SCAFLD  NZ_JAALYB010000001-NZ_JAALYB010000060
//
LOCUS       NZ_SJSX01000000      4286900 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Aliivibrio fischeri strain FQ-A001, whole genome shotgun sequencing
            project.
ACCESSION   NZ_SJSX00000000
VERSION     NZ_SJSX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11031202
            Assembly: GCF_004359415.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aliivibrio fischeri (Vibrio fischeri)
  ORGANISM  Aliivibrio fischeri
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Aliivibrio.
REFERENCE   1  (bases 1 to 4286900)
  AUTHORS   Bultman,K.M., Cecere,A.G., Septer,A.N., Miyashiro,T. and
            Mandel,M.J.
  TITLE     Draft genome sequence of Vibrio fischeri FQ-A001
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4286900)
  AUTHORS   Bultman,K.M., Cecere,A.G., Septer,A.N., Miyashiro,T. and
            Mandel,M.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-FEB-2019) Medical Microbiology & Immunology,
            University of Wisconsin-Madison, 1550 Linden Drive, Madison, WI
            53706, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SJSX00000000.1.
            The Aliivibrio fischeri whole genome shotgun (WGS) project has the
            project accession NZ_SJSX00000000.  This version of the project
            (01) has the accession number NZ_SJSX01000000, and consists of
            sequences SJSX01000001-SJSX01000004.
            Bacteria and source DNA available from Tim Miyashiro, The
            Pennsylvania State University.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 470.0x
            Sequencing Technology  :: Illumina HiSeq; PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004359415.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:43:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,959
            CDSs (total)                      :: 3,831
            Genes (coding)                    :: 3,818
            CDSs (with protein)               :: 3,818
            Genes (RNA)                       :: 128
            rRNAs                             :: 6, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 3, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 111
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 2 of 13
            Pseudo Genes (incomplete)         :: 10 of 13
            Pseudo Genes (internal stop)      :: 1 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4286900
                     /organism="Aliivibrio fischeri"
                     /mol_type="genomic DNA"
                     /strain="FQ-A001"
                     /host="Euprymna scolopes"
                     /db_xref="taxon:668"
                     /geo_loc_name="USA: Hawaii, Oahu, Kaneohe Bay"
                     /collection_date="2015"
                     /collected_by="Andrew G. Cecere"
WGS         SJSX01000001-SJSX01000004
WGS_SCAFLD  NZ_SJSX01000001-NZ_SJSX01000004
//
LOCUS       NZ_WPHK01000000      5280974 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain CG1013, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WPHK00000000
VERSION     NZ_WPHK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13451338
            Assembly: GCF_009743995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5280974)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Whole-genome sequencing of Allorhizobium vitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5280974)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2019) School of Life and Environmental Sciences,
            Deakin University, 75 Pidgons Road, Waurn Ponds, Victoria 3216,
            Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WPHK00000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_WPHK00000000.  This version of the project
            (01) has the accession number NZ_WPHK01000000, and consists of
            sequences WPHK01000001-WPHK01000026.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 153x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009743995.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:44:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,875
            CDSs (total)                      :: 4,819
            Genes (coding)                    :: 4,752
            CDSs (with protein)               :: 4,752
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 27 of 67
            Pseudo Genes (incomplete)         :: 49 of 67
            Pseudo Genes (internal stop)      :: 10 of 67
            Pseudo Genes (multiple problems)  :: 17 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5280974
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="CG1013"
                     /isolation_source="Merlot grape gall"
                     /host="Vitis vinifera"
                     /db_xref="taxon:373"
                     /geo_loc_name="Hungary: Balatonboglar"
                     /collection_date="1977"
                     /collected_by="Sandor Sule"
WGS         WPHK01000001-WPHK01000026
WGS_SCAFLD  NZ_WPHK01000001-NZ_WPHK01000026
//
LOCUS       NZ_WPHU01000000      5948523 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain CG415, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WPHU00000000
VERSION     NZ_WPHU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13451328
            Assembly: GCF_009744195.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5948523)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Whole-genome sequencing of Allorhizobium vitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5948523)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2019) School of Life and Environmental Sciences,
            Deakin University, 75 Pidgons Road, Waurn Ponds, Victoria 3216,
            Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WPHU00000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_WPHU00000000.  This version of the project
            (01) has the accession number NZ_WPHU01000000, and consists of
            sequences WPHU01000001-WPHU01000053.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 132x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009744195.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:48:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,384
            CDSs (total)                      :: 5,329
            Genes (coding)                    :: 5,231
            CDSs (with protein)               :: 5,231
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 98
            CDSs (without protein)            :: 98
            Pseudo Genes (ambiguous residues) :: 0 of 98
            Pseudo Genes (frameshifted)       :: 39 of 98
            Pseudo Genes (incomplete)         :: 76 of 98
            Pseudo Genes (internal stop)      :: 17 of 98
            Pseudo Genes (multiple problems)  :: 28 of 98
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5948523
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="CG415"
                     /isolation_source="Vineyard soil"
                     /db_xref="taxon:373"
                     /geo_loc_name="USA: New York"
                     /collected_by="Tom Burr"
WGS         WPHU01000001-WPHU01000053
WGS_SCAFLD  NZ_WPHU01000001-NZ_WPHU01000053
//
LOCUS       NZ_CDVFXI010000000   2909979 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Alloalcanivorax venustensis isolate MarMAG_001788, whole
            genome shotgun sequencing project.
ACCESSION   NZ_CDVFXI000000000
VERSION     NZ_CDVFXI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737277
            Assembly: GCF_977673245.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Alloalcanivorax venustensis (marine metagenome)
  ORGANISM  Alloalcanivorax venustensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Alcanivoracaceae; Alloalcanivorax.
REFERENCE   1  (bases 1 to 2909979)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVFXI000000000.1.
            The Alloalcanivorax venustensis whole genome shotgun (WGS) project
            has the project accession NZ_CDVFXI000000000.  This version of the
            project (01) has the accession number NZ_CDVFXI010000000, and
            consists of sequences CDVFXI010000001-CDVFXI010000279.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977673245.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:25:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,867
            CDSs (total)                      :: 2,832
            Genes (coding)                    :: 2,791
            CDSs (with protein)               :: 2,791
            Genes (RNA)                       :: 35
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 41
            CDSs (without protein)            :: 41
            Pseudo Genes (ambiguous residues) :: 0 of 41
            Pseudo Genes (frameshifted)       :: 0 of 41
            Pseudo Genes (incomplete)         :: 41 of 41
            Pseudo Genes (internal stop)      :: 0 of 41
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2909979
                     /organism="Alloalcanivorax venustensis"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_001788"
                     /isolation_source="Mariana Trench, free-living
                     microorganism abyssal water (4,000 m)"
                     /db_xref="taxon:172371"
                     /environmental_sample
                     /geo_loc_name="Pacific Ocean"
                     /collection_date="2016-09-15"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVFXI010000001-CDVFXI010000279
WGS_SCAFLD  NZ_CDVFXI010000001-NZ_CDVFXI010000279
//
LOCUS       NZ_WPIA01000000      5976190 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain CG78, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WPIA00000000
VERSION     NZ_WPIA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13451322
            Assembly: GCF_009744325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5976190)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Whole-genome sequencing of Allorhizobium vitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5976190)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2019) School of Life and Environmental Sciences,
            Deakin University, 75 Pidgons Road, Waurn Ponds, Victoria 3216,
            Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WPIA00000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_WPIA00000000.  This version of the project
            (01) has the accession number NZ_WPIA01000000, and consists of
            sequences WPIA01000001-WPIA01000098.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 57x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009744325.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:47:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,459
            CDSs (total)                      :: 5,403
            Genes (coding)                    :: 5,251
            CDSs (with protein)               :: 5,251
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 152
            CDSs (without protein)            :: 152
            Pseudo Genes (ambiguous residues) :: 0 of 152
            Pseudo Genes (frameshifted)       :: 44 of 152
            Pseudo Genes (incomplete)         :: 125 of 152
            Pseudo Genes (internal stop)      :: 15 of 152
            Pseudo Genes (multiple problems)  :: 28 of 152
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5976190
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="CG78"
                     /isolation_source="Grape Gall"
                     /host="Vitis vinifera"
                     /db_xref="taxon:373"
                     /geo_loc_name="USA: New York"
                     /collected_by="Tom Burr"
WGS         WPIA01000001-WPIA01000098
WGS_SCAFLD  NZ_WPIA01000001-NZ_WPIA01000098
//
LOCUS       NZ_VZOH01000000      1953172 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Aliarcobacter skirrowii CCUG 10374, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VZOH00000000
VERSION     NZ_VZOH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12697556
            Assembly: GCF_008802155.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aliarcobacter skirrowii CCUG 10374 (Aliiarcobacter skirrowii CCUG
            10374)
  ORGANISM  Aliarcobacter skirrowii CCUG 10374
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Arcobacteraceae; Aliarcobacter.
REFERENCE   1  (bases 1 to 1953172)
  AUTHORS   Tunovic,T., Pineiro-Iglesias,B., Unosson,C., Inganas,E., Ohlen,M.,
            Cardew,S., Jensie-Markopoulos,S., Salva-Serra,F., Jaen-Luchoro,D.,
            Karlsson,R., Svensson-Stadler,L., Chun,J. and Moore,E.
  TITLE     Draft genome sequences of 48 bacterial type strains from the CCUG
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1953172)
  AUTHORS   Tunovic,T., Pineiro-Iglesias,B., Unosson,C., Inganas,E., Ohlen,M.,
            Cardew,S., Jensie-Markopoulos,S., Salva-Serra,F., Jaen-Luchoro,D.,
            Karlsson,R., Svensson-Stadler,L., Chun,J. and Moore,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2019) Infectious Diseases, University of
            Gothenburg - CCUG, Guldhedsgatan 10, Box 7193, Gothenburg, Vastra
            Gotaland 40234, Sweden
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VZOH00000000.1.
            The Aliarcobacter skirrowii CCUG 10374 whole genome shotgun (WGS)
            project has the project accession NZ_VZOH00000000.  This version of
            the project (01) has the accession number NZ_VZOH01000000, and
            consists of sequences VZOH01000001-VZOH01000030.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 169.94x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_008802155.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:06:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,043
            CDSs (total)                      :: 2,001
            Genes (coding)                    :: 1,987
            CDSs (with protein)               :: 1,987
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 14
            CDSs (without protein)            :: 14
            Pseudo Genes (ambiguous residues) :: 0 of 14
            Pseudo Genes (frameshifted)       :: 2 of 14
            Pseudo Genes (incomplete)         :: 13 of 14
            Pseudo Genes (internal stop)      :: 0 of 14
            Pseudo Genes (multiple problems)  :: 1 of 14
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1953172
                     /organism="Aliarcobacter skirrowii CCUG 10374"
                     /mol_type="genomic DNA"
                     /strain="CCUG 10374"
                     /isolation_source="feces, 5-month-old, persistent scour
                     (diarrhoea)"
                     /host="lamb"
                     /culture_collection="CCUG:10374"
                     /type_material="type strain of Arcobacter skirrowii"
                     /db_xref="taxon:1032239"
                     /geo_loc_name="United Kingdom: Loughborough"
WGS         VZOH01000001-VZOH01000030
WGS_SCAFLD  NZ_VZOH01000001-NZ_VZOH01000030
//
LOCUS       NZ_WPHO01000000      5535040 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain CG964, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WPHO00000000
VERSION     NZ_WPHO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13451334
            Assembly: GCF_009744065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5535040)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Whole-genome sequencing of Allorhizobium vitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5535040)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2019) School of Life and Environmental Sciences,
            Deakin University, 75 Pidgons Road, Waurn Ponds, Victoria 3216,
            Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WPHO00000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_WPHO00000000.  This version of the project
            (01) has the accession number NZ_WPHO01000000, and consists of
            sequences WPHO01000001-WPHO01000036.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 36x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009744065.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:43:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,058
            CDSs (total)                      :: 5,002
            Genes (coding)                    :: 4,904
            CDSs (with protein)               :: 4,904
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 98
            CDSs (without protein)            :: 98
            Pseudo Genes (ambiguous residues) :: 0 of 98
            Pseudo Genes (frameshifted)       :: 32 of 98
            Pseudo Genes (incomplete)         :: 77 of 98
            Pseudo Genes (internal stop)      :: 17 of 98
            Pseudo Genes (multiple problems)  :: 25 of 98
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5535040
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="CG964"
                     /isolation_source="Schevrebe grape gall"
                     /host="Vitis vinifera"
                     /db_xref="taxon:373"
                     /geo_loc_name="Germany"
                     /collection_date="1985"
                     /collected_by="E. Bien"
WGS         WPHO01000001-WPHO01000036
WGS_SCAFLD  NZ_WPHO01000001-NZ_WPHO01000036
//
LOCUS       NZ_WJOL01000000      4978411 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium pusense strain CNPSo 3352, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WJOL00000000
VERSION     NZ_WJOL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13190956
            Assembly: GCF_009649115.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium pusense
  ORGANISM  Agrobacterium pusense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 4978411)
  AUTHORS   Delamuta,J.R.M., Ribeiro,R.A. and Hungria,M.
  TITLE     Genetic diversity of Agrobacterium spp. isolated from nodules of
            common bean and soybean in Brazil, Mexico, Ecuador and Mozambique
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4978411)
  AUTHORS   Delamuta,J.R.M., Ribeiro,R.A. and Hungria,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-NOV-2019) Soil Biotechnology Laboratory, Empresa
            Brasileira de Pesquisa Agropecuaria, Rodovia Carlos Joao Strass,
            Londrina, Parana 86001-970, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WJOL00000000.1.
            The Agrobacterium pusense whole genome shotgun (WGS) project has
            the project accession NZ_WJOL00000000.  This version of the project
            (01) has the accession number NZ_WJOL01000000, and consists of
            sequences WJOL01000001-WJOL01000013.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: MAY-2019
            Assembly Method        :: A5-Miseq pipeline v. 20140604
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 96.7x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009649115.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:34:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,707
            CDSs (total)                      :: 4,645
            Genes (coding)                    :: 4,605
            CDSs (with protein)               :: 4,605
            Genes (RNA)                       :: 62
            rRNAs                             :: 2, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 40
            CDSs (without protein)            :: 40
            Pseudo Genes (ambiguous residues) :: 0 of 40
            Pseudo Genes (frameshifted)       :: 10 of 40
            Pseudo Genes (incomplete)         :: 31 of 40
            Pseudo Genes (internal stop)      :: 0 of 40
            Pseudo Genes (multiple problems)  :: 1 of 40
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4978411
                     /organism="Agrobacterium pusense"
                     /mol_type="genomic DNA"
                     /strain="CNPSo 3352"
                     /isolation_source="nodules"
                     /host="Glycine max"
                     /db_xref="taxon:648995"
                     /geo_loc_name="Mozambique"
                     /collection_date="2013"
WGS         WJOL01000001-WJOL01000013
WGS_SCAFLD  NZ_WJOL01000001-NZ_WJOL01000013
//
LOCUS       NZ_MBEY02000000      5832628 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain Ni1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MBEY00000000
VERSION     NZ_MBEY00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05369594
            Assembly: GCF_001860125.2
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5832628)
  AUTHORS   Gan,H.M. and Savka,M.A.
  TITLE     Whole-genome sequencing of Allorhizobium vitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5832628)
  AUTHORS   Gan,H.M. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-NOV-2019) School of Life and Environmental Sciences,
            Deakin University, 75 Pidgons Road, Waurn Ponds, Victoria 3216,
            Australia
REFERENCE   3  (bases 1 to 5832628)
  AUTHORS   Lin,T.N., Gan,H.M. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-JUL-2016) School of Science, Monash University
            Malaysia, Jalan Lagoon Selatan, Bandar Sunway, Selangor 47500,
            Malaysia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MBEY00000000.2.
            
            On Dec 14, 2019 this sequence version replaced NZ_MBEY00000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_MBEY00000000.  This version of the project
            (02) has the accession number NZ_MBEY02000000, and consists of
            sequences MBEY02000001-MBEY02000043.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Professor Michael A. Savka,
            Rochester Institute of Technology.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. v3.13.0
            Assembly Name          :: Ni1_v2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 48.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001860125.2-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:51:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,350
            CDSs (total)                      :: 5,294
            Genes (coding)                    :: 5,163
            CDSs (with protein)               :: 5,163
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 131
            CDSs (without protein)            :: 131
            Pseudo Genes (ambiguous residues) :: 0 of 131
            Pseudo Genes (frameshifted)       :: 51 of 131
            Pseudo Genes (incomplete)         :: 94 of 131
            Pseudo Genes (internal stop)      :: 23 of 131
            Pseudo Genes (multiple problems)  :: 33 of 131
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5832628
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="Ni1"
                     /isolation_source="Crown gall tumor"
                     /host="Vitis vinifera"
                     /db_xref="taxon:373"
                     /geo_loc_name="Hungary"
                     /collection_date="1980"
WGS         MBEY02000001-MBEY02000043
WGS_SCAFLD  NZ_MBEY02000001-NZ_MBEY02000043
//
LOCUS       NZ_CDVOPI010000000   3284603 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Alloalcanivorax venustensis isolate MarMAG_001767, whole
            genome shotgun sequencing project.
ACCESSION   NZ_CDVOPI000000000
VERSION     NZ_CDVOPI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737203
            Assembly: GCF_977732045.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Alloalcanivorax venustensis (marine sediment metagenome)
  ORGANISM  Alloalcanivorax venustensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Alcanivoracaceae; Alloalcanivorax.
REFERENCE   1  (bases 1 to 3284603)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVOPI000000000.1.
            The Alloalcanivorax venustensis whole genome shotgun (WGS) project
            has the project accession NZ_CDVOPI000000000.  This version of the
            project (01) has the accession number NZ_CDVOPI010000000, and
            consists of sequences CDVOPI010000001-CDVOPI010000051.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977732045.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:23:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,113
            CDSs (total)                      :: 3,072
            Genes (coding)                    :: 3,059
            CDSs (with protein)               :: 3,059
            Genes (RNA)                       :: 41
            tRNAs                             :: 37
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 2 of 13
            Pseudo Genes (incomplete)         :: 11 of 13
            Pseudo Genes (internal stop)      :: 2 of 13
            Pseudo Genes (multiple problems)  :: 1 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3284603
                     /organism="Alloalcanivorax venustensis"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_001767"
                     /db_xref="taxon:172371"
                     /environmental_sample
                     /geo_loc_name="Atlantic Ocean"
                     /metagenome_source="marine sediment metagenome"
                     /metagenomic
WGS         CDVOPI010000001-CDVOPI010000051
WGS_SCAFLD  NZ_CDVOPI010000001-NZ_CDVOPI010000051
//
LOCUS       NZ_JAALYE010000000   5258425 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain CG412, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAALYE000000000
VERSION     NZ_JAALYE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14165504
            Assembly: GCF_013317415.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5258425)
  AUTHORS   Weisberg,A.J., Davis,E.W. 2nd, Tabima,J., Belcher,M.S., Miller,M.,
            Kuo,C.H., Loper,J.E., Grunwald,N.J., Putnam,M.L. and Chang,J.H.
  TITLE     Unexpected conservation and global transmission of agrobacterial
            virulence plasmids
  JOURNAL   Science 368 (6495) (2020)
   PUBMED   32499412
REFERENCE   2  (bases 1 to 5258425)
  AUTHORS   Weisberg,A.J., Davis,E.W. II, Tabima,J.R., Belcher,M.S., Miller,M.,
            Kuo,C.-H., Loper,J.E., Grunwald,N.J., Putnam,M.L. and Chang,J.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-FEB-2020) Botany and Plant Pathology, Oregon State
            University, 2082 Cordley Hall, Oregon State University, Corvallis,
            OR 97330, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAALYE000000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_JAALYE000000000.  This version of the project
            (01) has the accession number NZ_JAALYE010000000, and consists of
            sequences JAALYE010000001-JAALYE010000033.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 248x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013317415.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:41:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,791
            CDSs (total)                      :: 4,731
            Genes (coding)                    :: 4,650
            CDSs (with protein)               :: 4,650
            Genes (RNA)                       :: 60
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 30 of 81
            Pseudo Genes (incomplete)         :: 64 of 81
            Pseudo Genes (internal stop)      :: 9 of 81
            Pseudo Genes (multiple problems)  :: 21 of 81
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5258425
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="CG412"
                     /host="Grape"
                     /db_xref="taxon:373"
WGS         JAALYE010000001-JAALYE010000033
WGS_SCAFLD  NZ_JAALYE010000001-NZ_JAALYE010000033
//
LOCUS       NZ_JBWBRG010000000   3621140 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Arthrobacter sp. J156, whole genome shotgun sequencing project.
ACCESSION   NZ_JBWBRG000000000
VERSION     NZ_JBWBRG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56459734
            Assembly: GCF_056172865.1
KEYWORDS    WGS; RefSeq.
SOURCE      Arthrobacter sp. J156
  ORGANISM  Arthrobacter sp. J156
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (bases 1 to 3621140)
  AUTHORS   Zhao,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2026) MOE Key Laboratory of Coal Environmental
            Pathogenicity and Prevention, Shanxi Medical University, No. 56
            Xinjian South Road, Yingze District, Taiyuan, Shanxi 030001, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBRG000000000.1.
            The Arthrobacter sp. J156 whole genome shotgun (WGS) project has
            the project accession NZ_JBWBRG000000000.  This version of the
            project (01) has the accession number NZ_JBWBRG010000000, and
            consists of sequence JBWBRG010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SMRT v. 2.3.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 318.62x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172865.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:46:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,343
            CDSs (total)                      :: 3,280
            Genes (coding)                    :: 3,235
            CDSs (with protein)               :: 3,235
            Genes (RNA)                       :: 63
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 45
            CDSs (without protein)            :: 45
            Pseudo Genes (ambiguous residues) :: 0 of 45
            Pseudo Genes (frameshifted)       :: 10 of 45
            Pseudo Genes (incomplete)         :: 39 of 45
            Pseudo Genes (internal stop)      :: 3 of 45
            Pseudo Genes (multiple problems)  :: 6 of 45
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3621140
                     /organism="Arthrobacter sp. J156"
                     /mol_type="genomic DNA"
                     /strain="J156"
                     /isolation_source="in-situ coal"
                     /db_xref="taxon:3694921"
                     /geo_loc_name="China: Xinzhou city, Shanxi Province"
                     /collection_date="2024"
WGS         JBWBRG010000001
WGS_SCAFLD  NZ_CM149650
//
LOCUS       NZ_MBFB02000000      5953181 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain Rr4, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MBFB00000000
VERSION     NZ_MBFB00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05369607
            Assembly: GCF_001860085.2
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5953181)
  AUTHORS   Gan,H.M. and Savka,M.A.
  TITLE     Whole-genome sequencing of Allorhizobium vitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5953181)
  AUTHORS   Gan,H.M. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-NOV-2019) School of Life and Environmental Sciences,
            Deakin University, 75 Pidgons Road, Waurn Ponds, Victoria 3216,
            Australia
REFERENCE   3  (bases 1 to 5953181)
  AUTHORS   Lin,T.N., Gan,H.M. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-JUL-2016) School of Science, Monash University
            Malaysia, Jalan Lagoon Selatan, Bandar Sunway, Selangor 47500,
            Malaysia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MBFB00000000.2.
            
            On Dec 14, 2019 this sequence version replaced NZ_MBFB00000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_MBFB00000000.  This version of the project
            (02) has the accession number NZ_MBFB02000000, and consists of
            sequences MBFB02000001-MBFB02000079.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Professor Michael A. Savka,
            Rochester Institute of Technology.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. v3.13.0
            Assembly Name          :: Rr4_v2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 43.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001860085.2-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:55:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,500
            CDSs (total)                      :: 5,444
            Genes (coding)                    :: 5,306
            CDSs (with protein)               :: 5,306
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 138
            CDSs (without protein)            :: 138
            Pseudo Genes (ambiguous residues) :: 0 of 138
            Pseudo Genes (frameshifted)       :: 47 of 138
            Pseudo Genes (incomplete)         :: 102 of 138
            Pseudo Genes (internal stop)      :: 24 of 138
            Pseudo Genes (multiple problems)  :: 32 of 138
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5953181
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="Rr4"
                     /isolation_source="Crown gall tumor"
                     /host="Vitis vinifera"
                     /db_xref="taxon:373"
                     /geo_loc_name="Hungary"
                     /collection_date="1982"
WGS         MBFB02000001-MBFB02000079
WGS_SCAFLD  NZ_MBFB02000001-NZ_MBFB02000079
//
LOCUS       NZ_WPHX01000000      5675280 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain CG102, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WPHX00000000
VERSION     NZ_WPHX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13451325
            Assembly: GCF_009744225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5675280)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Whole-genome sequencing of Allorhizobium vitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5675280)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2019) School of Life and Environmental Sciences,
            Deakin University, 75 Pidgons Road, Waurn Ponds, Victoria 3216,
            Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WPHX00000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_WPHX00000000.  This version of the project
            (01) has the accession number NZ_WPHX01000000, and consists of
            sequences WPHX01000001-WPHX01000078.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 49x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009744225.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:44:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,181
            CDSs (total)                      :: 5,127
            Genes (coding)                    :: 5,020
            CDSs (with protein)               :: 5,020
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 107
            CDSs (without protein)            :: 107
            Pseudo Genes (ambiguous residues) :: 0 of 107
            Pseudo Genes (frameshifted)       :: 34 of 107
            Pseudo Genes (incomplete)         :: 85 of 107
            Pseudo Genes (internal stop)      :: 14 of 107
            Pseudo Genes (multiple problems)  :: 23 of 107
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5675280
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="CG102"
                     /isolation_source="Grape Gall"
                     /host="Vitis vinifera"
                     /db_xref="taxon:373"
                     /geo_loc_name="USA: Virginia"
                     /collected_by="Tom Burr"
WGS         WPHX01000001-WPHX01000078
WGS_SCAFLD  NZ_WPHX01000001-NZ_WPHX01000078
//
LOCUS       NZ_JAAMCP010000000   5662578 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium rubi strain A19/93, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAAMCP000000000
VERSION     NZ_JAAMCP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14165513
            Assembly: GCF_013320905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium rubi (Rhizobium rubi)
  ORGANISM  Agrobacterium rubi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5662578)
  AUTHORS   Weisberg,A.J., Davis,E.W. 2nd, Tabima,J., Belcher,M.S., Miller,M.,
            Kuo,C.H., Loper,J.E., Grunwald,N.J., Putnam,M.L. and Chang,J.H.
  TITLE     Unexpected conservation and global transmission of agrobacterial
            virulence plasmids
  JOURNAL   Science 368 (6495) (2020)
   PUBMED   32499412
REFERENCE   2  (bases 1 to 5662578)
  AUTHORS   Weisberg,A.J., Davis,E.W. II, Tabima,J.R., Belcher,M.S., Miller,M.,
            Kuo,C.-H., Loper,J.E., Grunwald,N.J., Putnam,M.L. and Chang,J.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-FEB-2020) Botany and Plant Pathology, Oregon State
            University, 2082 Cordley Hall, Oregon State University, Corvallis,
            OR 97330, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAAMCP000000000.1.
            The Agrobacterium rubi whole genome shotgun (WGS) project has the
            project accession NZ_JAAMCP000000000.  This version of the project
            (01) has the accession number NZ_JAAMCP010000000, and consists of
            sequences JAAMCP010000001-JAAMCP010000036.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 125x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013320905.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:41:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,402
            CDSs (total)                      :: 5,345
            Genes (coding)                    :: 5,235
            CDSs (with protein)               :: 5,235
            Genes (RNA)                       :: 57
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 110
            CDSs (without protein)            :: 110
            Pseudo Genes (ambiguous residues) :: 0 of 110
            Pseudo Genes (frameshifted)       :: 48 of 110
            Pseudo Genes (incomplete)         :: 84 of 110
            Pseudo Genes (internal stop)      :: 21 of 110
            Pseudo Genes (multiple problems)  :: 36 of 110
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5662578
                     /organism="Agrobacterium rubi"
                     /mol_type="genomic DNA"
                     /strain="A19/93"
                     /host="Euonymus"
                     /db_xref="taxon:28099"
                     /collection_date="1993"
WGS         JAAMCP010000001-JAAMCP010000036
WGS_SCAFLD  NZ_JAAMCP010000001-NZ_JAAMCP010000036
//
LOCUS       NZ_JBWBVC010000000   4336065 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Anaerobacillus sp. QJM3NY_32, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWBVC000000000
VERSION     NZ_JBWBVC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449749
            Assembly: GCF_056173645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Anaerobacillus sp. QJM3NY_32
  ORGANISM  Anaerobacillus sp. QJM3NY_32
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Anaerobacillus.
REFERENCE   1  (bases 1 to 4336065)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4336065)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBVC000000000.1.
            The Anaerobacillus sp. QJM3NY_32 whole genome shotgun (WGS) project
            has the project accession NZ_JBWBVC000000000.  This version of the
            project (01) has the accession number NZ_JBWBVC010000000, and
            consists of sequence JBWBVC010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 324x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173645.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:46:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,439
            CDSs (total)                      :: 4,318
            Genes (coding)                    :: 4,290
            CDSs (with protein)               :: 4,290
            Genes (RNA)                       :: 121
            rRNAs                             :: 9, 9, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 9 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 5 of 28
            Pseudo Genes (incomplete)         :: 23 of 28
            Pseudo Genes (internal stop)      :: 4 of 28
            Pseudo Genes (multiple problems)  :: 3 of 28
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4336065
                     /organism="Anaerobacillus sp. QJM3NY_32"
                     /mol_type="genomic DNA"
                     /strain="QJM3NY_32"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569809"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBVC010000001
WGS_SCAFLD  NZ_CM149684
//
LOCUS       NZ_MBEX02000000      6119695 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain AT6, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MBEX00000000
VERSION     NZ_MBEX00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05369579
            Assembly: GCF_001860165.2
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 6119695)
  AUTHORS   Gan,H.M. and Savka,M.A.
  TITLE     Whole-genome sequencing of Allorhizobium vitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6119695)
  AUTHORS   Gan,H.M. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-NOV-2019) School of Life and Environmental Sciences,
            Deakin University, 75 Pidgons Road, Waurn Ponds, Victoria 3216,
            Australia
REFERENCE   3  (bases 1 to 6119695)
  AUTHORS   Lin,T.N., Gan,H.M. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-JUL-2016) School of Science, Monash University
            Malaysia, Jalan Lagoon Selatan, Bandar Sunway, Selangor 47500,
            Malaysia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MBEX00000000.2.
            
            On Dec 14, 2019 this sequence version replaced NZ_MBEX00000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_MBEX00000000.  This version of the project
            (02) has the accession number NZ_MBEX02000000, and consists of
            sequences MBEX02000001-MBEX02000095.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Professor Michael A. Savka,
            Rochester Institute of Technology.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. v3.13.0
            Assembly Name          :: AT6_v2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 45.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001860165.2-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:55:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,612
            CDSs (total)                      :: 5,558
            Genes (coding)                    :: 5,431
            CDSs (with protein)               :: 5,431
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 127
            CDSs (without protein)            :: 127
            Pseudo Genes (ambiguous residues) :: 0 of 127
            Pseudo Genes (frameshifted)       :: 37 of 127
            Pseudo Genes (incomplete)         :: 109 of 127
            Pseudo Genes (internal stop)      :: 13 of 127
            Pseudo Genes (multiple problems)  :: 28 of 127
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6119695
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="AT6"
                     /isolation_source="Crown gall tumor"
                     /host="Vitis vinifera"
                     /db_xref="taxon:373"
                     /geo_loc_name="Hungary"
                     /collection_date="1976"
WGS         MBEX02000001-MBEX02000095
WGS_SCAFLD  NZ_MBEX02000001-NZ_MBEX02000095
//
LOCUS       NZ_JABKAE010000000   2199553 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Aggregatibacter actinomycetemcomitans strain 394M, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JABKAE000000000
VERSION     NZ_JABKAE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14969741
            Assembly: GCF_021310275.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aggregatibacter actinomycetemcomitans
  ORGANISM  Aggregatibacter actinomycetemcomitans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Aggregatibacter.
REFERENCE   1  (bases 1 to 2199553)
  AUTHORS   Nedergaard,S., Jensen,A.B., Haubek,D. and Norskov-Lauritsen,N.
  TITLE     Multilocus Sequence Typing of Aggregatibacter actinomycetemcomitans
            Competently Depicts the Population Structure of the Species
  JOURNAL   Microbiol Spectr 9 (3), e0108521 (2021)
   PUBMED   34908433
REFERENCE   2  (bases 1 to 2199553)
  AUTHORS   Nedergaard,S. and Noerskov-Lauritsen,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-MAY-2020) Department of Clinical Microbiology, Aarhus
            University Hospital, Palle Juul-Jensens Boulevard 99, Aarhus N
            8200, Denmark
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JABKAE000000000.1.
            The Aggregatibacter actinomycetemcomitans whole genome shotgun
            (WGS) project has the project accession NZ_JABKAE000000000.  This
            version of the project (01) has the accession number
            NZ_JABKAE010000000, and consists of sequences
            JABKAE010000001-JABKAE010000038.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler: v. 0.4.7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 96.5x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_021310275.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:22:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,240
            CDSs (total)                      :: 2,185
            Genes (coding)                    :: 2,074
            CDSs (with protein)               :: 2,074
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 55 of 111
            Pseudo Genes (incomplete)         :: 56 of 111
            Pseudo Genes (internal stop)      :: 26 of 111
            Pseudo Genes (multiple problems)  :: 22 of 111
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2199553
                     /organism="Aggregatibacter actinomycetemcomitans"
                     /mol_type="genomic DNA"
                     /strain="394M"
                     /isolation_source="subgingival plaque"
                     /host="Homo sapiens"
                     /db_xref="taxon:714"
                     /geo_loc_name="Morocco"
                     /collection_date="2005"
                     /collected_by="Aarhus University, Denmark, Dorte Haubek"
WGS         JABKAE010000001-JABKAE010000038
WGS_SCAFLD  NZ_JABKAE010000001-NZ_JABKAE010000038
//
LOCUS       NZ_JBWBVD010000000   4477628 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Anaerobacillus sp. QJM3NY_17, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWBVD000000000
VERSION     NZ_JBWBVD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449748
            Assembly: GCF_056173665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Anaerobacillus sp. QJM3NY_17
  ORGANISM  Anaerobacillus sp. QJM3NY_17
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Anaerobacillus.
REFERENCE   1  (bases 1 to 4477628)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4477628)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBVD000000000.1.
            The Anaerobacillus sp. QJM3NY_17 whole genome shotgun (WGS) project
            has the project accession NZ_JBWBVD000000000.  This version of the
            project (01) has the accession number NZ_JBWBVD010000000, and
            consists of sequences JBWBVD010000001-JBWBVD010000003.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 468.1x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173665.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 18:14:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,570
            CDSs (total)                      :: 4,449
            Genes (coding)                    :: 4,423
            CDSs (with protein)               :: 4,423
            Genes (RNA)                       :: 121
            rRNAs                             :: 9, 9, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 9 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 7 of 26
            Pseudo Genes (incomplete)         :: 18 of 26
            Pseudo Genes (internal stop)      :: 4 of 26
            Pseudo Genes (multiple problems)  :: 3 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4477628
                     /organism="Anaerobacillus sp. QJM3NY_17"
                     /mol_type="genomic DNA"
                     /strain="QJM3NY_17"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569808"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBVD010000001-JBWBVD010000003
WGS_SCAFLD  NZ_CM149685
WGS_SCAFLD  NZ_JBWBVD010000002-NZ_JBWBVD010000003
//
LOCUS       NZ_WPHZ01000000      6505015 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain CG81, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WPHZ00000000
VERSION     NZ_WPHZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13451323
            Assembly: GCF_009744295.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 6505015)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Whole-genome sequencing of Allorhizobium vitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6505015)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2019) School of Life and Environmental Sciences,
            Deakin University, 75 Pidgons Road, Waurn Ponds, Victoria 3216,
            Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WPHZ00000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_WPHZ00000000.  This version of the project
            (01) has the accession number NZ_WPHZ01000000, and consists of
            sequences WPHZ01000001-WPHZ01000120.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 61x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009744295.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:06:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,035
            CDSs (total)                      :: 5,980
            Genes (coding)                    :: 5,779
            CDSs (with protein)               :: 5,779
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 201
            CDSs (without protein)            :: 201
            Pseudo Genes (ambiguous residues) :: 0 of 201
            Pseudo Genes (frameshifted)       :: 56 of 201
            Pseudo Genes (incomplete)         :: 163 of 201
            Pseudo Genes (internal stop)      :: 22 of 201
            Pseudo Genes (multiple problems)  :: 36 of 201
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6505015
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="CG81"
                     /isolation_source="Grape Gall"
                     /host="Vitis vinifera"
                     /db_xref="taxon:373"
                     /geo_loc_name="USA: Michigan"
                     /collected_by="Tom Burr"
WGS         WPHZ01000001-WPHZ01000120
WGS_SCAFLD  NZ_WPHZ01000001-NZ_WPHZ01000120
//
LOCUS       NZ_MBEV02000000      5755308 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain AB4, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MBEV00000000
VERSION     NZ_MBEV00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05366360
            Assembly: GCF_001758275.2
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5755308)
  AUTHORS   Gan,H.M. and Savka,M.A.
  TITLE     Whole-genome sequencing of Allorhizobium vitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5755308)
  AUTHORS   Gan,H.M. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-NOV-2019) School of Life and Environmental Sciences,
            Deakin University, 75 Pidgons Road, Waurn Ponds, Victoria 3216,
            Australia
REFERENCE   3  (bases 1 to 5755308)
  AUTHORS   Chin,J., Gan,H.M. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-JUL-2016) School of Science, Monash University
            Malaysia, Jalan Lagoon Selatan, Bandar Sunway, Selangor 47500,
            Malaysia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MBEV00000000.2.
            
            On Dec 14, 2019 this sequence version replaced NZ_MBEV00000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_MBEV00000000.  This version of the project
            (02) has the accession number NZ_MBEV02000000, and consists of
            sequences MBEV02000001-MBEV02000039.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Professor Michael A. Savka,
            Rochester Institute of Technology.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. v3.13.0
            Assembly Name          :: AB4_v2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 80.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001758275.2-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:59:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,274
            CDSs (total)                      :: 5,218
            Genes (coding)                    :: 5,109
            CDSs (with protein)               :: 5,109
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 38 of 109
            Pseudo Genes (incomplete)         :: 83 of 109
            Pseudo Genes (internal stop)      :: 18 of 109
            Pseudo Genes (multiple problems)  :: 27 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5755308
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="AB4"
                     /isolation_source="Crown gall tumor"
                     /host="Vitis vinifera"
                     /db_xref="taxon:373"
                     /geo_loc_name="Hungary"
                     /collection_date="1987"
WGS         MBEV02000001-MBEV02000039
WGS_SCAFLD  NZ_MBEV02000001-NZ_MBEV02000039
//
LOCUS       NZ_JBWBRH010000000   3563595 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Arthrobacter sp. LT660, whole genome shotgun sequencing project.
ACCESSION   NZ_JBWBRH000000000
VERSION     NZ_JBWBRH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56459847
            Assembly: GCF_056172845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Arthrobacter sp. LT660
  ORGANISM  Arthrobacter sp. LT660
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Arthrobacter.
REFERENCE   1  (bases 1 to 3563595)
  AUTHORS   Zhao,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2026) MOE Key Laboratory of Coal Environmental
            Pathogenicity and Prevention, Shanxi Medical University, No. 56
            Xinjian South Road, Yingze District, Taiyuan, Shanxi 030001, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBRH000000000.1.
            The Arthrobacter sp. LT660 whole genome shotgun (WGS) project has
            the project accession NZ_JBWBRH000000000.  This version of the
            project (01) has the accession number NZ_JBWBRH010000000, and
            consists of sequence JBWBRH010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SMRT v. 2.3.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 405.63x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172845.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:38:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,335
            CDSs (total)                      :: 3,272
            Genes (coding)                    :: 3,208
            CDSs (with protein)               :: 3,208
            Genes (RNA)                       :: 63
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 17 of 64
            Pseudo Genes (incomplete)         :: 51 of 64
            Pseudo Genes (internal stop)      :: 7 of 64
            Pseudo Genes (multiple problems)  :: 10 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3563595
                     /organism="Arthrobacter sp. LT660"
                     /mol_type="genomic DNA"
                     /strain="LT660"
                     /isolation_source="in-situ coal"
                     /db_xref="taxon:3694924"
                     /geo_loc_name="China: Linfen City, Shanxi Province"
                     /collection_date="2025"
WGS         JBWBRH010000001
WGS_SCAFLD  NZ_CM149651
//
LOCUS       NZ_WPHR01000000      6067684 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain CG516, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WPHR00000000
VERSION     NZ_WPHR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13451331
            Assembly: GCF_009744135.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 6067684)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Whole-genome sequencing of Allorhizobium vitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6067684)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2019) School of Life and Environmental Sciences,
            Deakin University, 75 Pidgons Road, Waurn Ponds, Victoria 3216,
            Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WPHR00000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_WPHR00000000.  This version of the project
            (01) has the accession number NZ_WPHR01000000, and consists of
            sequences WPHR01000001-WPHR01000089.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 81x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009744135.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:46:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,473
            CDSs (total)                      :: 5,418
            Genes (coding)                    :: 5,293
            CDSs (with protein)               :: 5,293
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 125
            CDSs (without protein)            :: 125
            Pseudo Genes (ambiguous residues) :: 0 of 125
            Pseudo Genes (frameshifted)       :: 49 of 125
            Pseudo Genes (incomplete)         :: 100 of 125
            Pseudo Genes (internal stop)      :: 16 of 125
            Pseudo Genes (multiple problems)  :: 34 of 125
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6067684
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="CG516"
                     /isolation_source="Wild Grape Roots"
                     /db_xref="taxon:373"
                     /geo_loc_name="USA: New York"
                     /collection_date="1994"
                     /collected_by="Tom Burr"
WGS         WPHR01000001-WPHR01000089
WGS_SCAFLD  NZ_WPHR01000001-NZ_WPHR01000089
//
LOCUS       NZ_MBEZ02000000      5784402 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain NW221, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MBEZ00000000
VERSION     NZ_MBEZ00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05369596
            Assembly: GCF_001860185.2
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5784402)
  AUTHORS   Gan,H.M. and Savka,M.A.
  TITLE     Whole-genome sequencing of Allorhizobium vitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5784402)
  AUTHORS   Gan,H.M. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-NOV-2019) School of Life and Environmental Sciences,
            Deakin University, 75 Pidgons Road, Waurn Ponds, Victoria 3216,
            Australia
REFERENCE   3  (bases 1 to 5784402)
  AUTHORS   Lin,T.N., Gan,H.M. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-JUL-2016) School of Science, Monash University
            Malaysia, Jalan Lagoon Selatan, Bandar Sunway, Selangor 47500,
            Malaysia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MBEZ00000000.2.
            
            On Dec 14, 2019 this sequence version replaced NZ_MBEZ00000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_MBEZ00000000.  This version of the project
            (02) has the accession number NZ_MBEZ02000000, and consists of
            sequences MBEZ02000001-MBEZ02000123.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Professor Michael A. Savka,
            Rochester Institute of Technology.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. v3.13.0
            Assembly Name          :: NW221_v2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 43.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001860185.2-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:01:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,276
            CDSs (total)                      :: 5,222
            Genes (coding)                    :: 5,073
            CDSs (with protein)               :: 5,073
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 149
            CDSs (without protein)            :: 149
            Pseudo Genes (ambiguous residues) :: 0 of 149
            Pseudo Genes (frameshifted)       :: 42 of 149
            Pseudo Genes (incomplete)         :: 122 of 149
            Pseudo Genes (internal stop)      :: 14 of 149
            Pseudo Genes (multiple problems)  :: 25 of 149
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5784402
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="NW221"
                     /isolation_source="Crown gall tumor"
                     /host="Vitis vinifera"
                     /db_xref="taxon:373"
                     /geo_loc_name="Germany"
WGS         MBEZ02000001-MBEZ02000123
WGS_SCAFLD  NZ_MBEZ02000001-NZ_MBEZ02000123
//
LOCUS       NZ_JBWBVE010000000   4277210 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Anaerobacillus sp. QJM3NY_13, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWBVE000000000
VERSION     NZ_JBWBVE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449747
            Assembly: GCF_056173685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Anaerobacillus sp. QJM3NY_13
  ORGANISM  Anaerobacillus sp. QJM3NY_13
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Anaerobacillus.
REFERENCE   1  (bases 1 to 4277210)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4277210)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBVE000000000.1.
            The Anaerobacillus sp. QJM3NY_13 whole genome shotgun (WGS) project
            has the project accession NZ_JBWBVE000000000.  This version of the
            project (01) has the accession number NZ_JBWBVE010000000, and
            consists of sequence JBWBVE010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 251.1x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173685.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:50:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,381
            CDSs (total)                      :: 4,260
            Genes (coding)                    :: 4,234
            CDSs (with protein)               :: 4,234
            Genes (RNA)                       :: 121
            rRNAs                             :: 9, 9, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 9 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 8 of 26
            Pseudo Genes (incomplete)         :: 17 of 26
            Pseudo Genes (internal stop)      :: 2 of 26
            Pseudo Genes (multiple problems)  :: 1 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4277210
                     /organism="Anaerobacillus sp. QJM3NY_13"
                     /mol_type="genomic DNA"
                     /strain="QJM3NY_13"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569807"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBVE010000001
WGS_SCAFLD  NZ_CM149687
//
LOCUS       NZ_WPHT01000000      5355455 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain CG474, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WPHT00000000
VERSION     NZ_WPHT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13451329
            Assembly: GCF_009744155.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5355455)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Whole-genome sequencing of Allorhizobium vitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5355455)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2019) School of Life and Environmental Sciences,
            Deakin University, 75 Pidgons Road, Waurn Ponds, Victoria 3216,
            Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WPHT00000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_WPHT00000000.  This version of the project
            (01) has the accession number NZ_WPHT01000000, and consists of
            sequences WPHT01000001-WPHT01000050.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 71x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009744155.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:40:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,883
            CDSs (total)                      :: 4,827
            Genes (coding)                    :: 4,722
            CDSs (with protein)               :: 4,722
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 24 of 105
            Pseudo Genes (incomplete)         :: 84 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 11 of 105
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5355455
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="CG474"
                     /isolation_source="Grape Root"
                     /host="Vitis vinifera"
                     /db_xref="taxon:373"
                     /geo_loc_name="USA: New Mexico"
                     /collected_by="Tom Burr"
WGS         WPHT01000001-WPHT01000050
WGS_SCAFLD  NZ_WPHT01000001-NZ_WPHT01000050
//
LOCUS       NZ_JBUXFN010000000   6388325 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Bacteroides ovatus strain SZ-B14, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBUXFN000000000
VERSION     NZ_JBUXFN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN55076131
            Assembly: GCF_055327015.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacteroides ovatus
  ORGANISM  Bacteroides ovatus
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Bacteroidaceae; Bacteroides.
REFERENCE   1  (bases 1 to 6388325)
  AUTHORS   Huang,P., Du,M., Wan,Q., Han,Z., Guo,Y. and Han,W.
  TITLE     Draft genome sequences of gut-associated Bacteroides strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6388325)
  AUTHORS   Huang,P., Du,M., Wan,Q., Han,Z., Guo,Y. and Han,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-FEB-2026) College of Life Science and Technology,
            Huazhong Agricultural University, No. 1 Shizishan Street, Hongshan
            District, Wuhan, Hubei 430070, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBUXFN000000000.1.
            The Bacteroides ovatus whole genome shotgun (WGS) project has the
            project accession NZ_JBUXFN000000000.  This version of the project
            (01) has the accession number NZ_JBUXFN010000000, and consists of
            sequences JBUXFN010000001-JBUXFN010000048.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.5.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 144.4x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_055327015.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:47:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,673
            CDSs (total)                      :: 4,595
            Genes (coding)                    :: 4,563
            CDSs (with protein)               :: 4,563
            Genes (RNA)                       :: 78
            rRNAs                             :: 3, 4 (16S, 23S)
            partial rRNAs                     :: 3, 4 (16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 32
            CDSs (without protein)            :: 32
            Pseudo Genes (ambiguous residues) :: 0 of 32
            Pseudo Genes (frameshifted)       :: 16 of 32
            Pseudo Genes (incomplete)         :: 19 of 32
            Pseudo Genes (internal stop)      :: 4 of 32
            Pseudo Genes (multiple problems)  :: 6 of 32
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6388325
                     /organism="Bacteroides ovatus"
                     /mol_type="genomic DNA"
                     /strain="SZ-B14"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:28116"
                     /geo_loc_name="China: Suzhou"
                     /collection_date="2025-01-20"
WGS         JBUXFN010000001-JBUXFN010000048
WGS_SCAFLD  NZ_JBUXFN010000001-NZ_JBUXFN010000048
//
LOCUS       NZ_MBFA02000000      5993255 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain RF2/1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MBFA00000000
VERSION     NZ_MBFA00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05369604
            Assembly: GCF_001860205.2
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5993255)
  AUTHORS   Gan,H.M. and Savka,M.A.
  TITLE     Whole-genome sequencing of Allorhizobium vitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5993255)
  AUTHORS   Gan,H.M. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-NOV-2019) School of Life and Environmental Sciences,
            Deakin University, 75 Pidgons Road, Waurn Ponds, Victoria 3216,
            Australia
REFERENCE   3  (bases 1 to 5993255)
  AUTHORS   Lin,T.N., Gan,H.M. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-JUL-2016) School of Science, Monash University
            Malaysia, Jalan Lagoon Selatan, Bandar Sunway, Selangor 47500,
            Malaysia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MBFA00000000.2.
            
            On Dec 14, 2019 this sequence version replaced NZ_MBFA00000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_MBFA00000000.  This version of the project
            (02) has the accession number NZ_MBFA02000000, and consists of
            sequences MBFA02000001-MBFA02000086.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Professor Michael A. Savka,
            Rochester Institute of Technology.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. v3.13.0
            Assembly Name          :: RF2-1_v2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 55.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001860205.2-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:56:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,503
            CDSs (total)                      :: 5,447
            Genes (coding)                    :: 5,285
            CDSs (with protein)               :: 5,285
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 162
            CDSs (without protein)            :: 162
            Pseudo Genes (ambiguous residues) :: 0 of 162
            Pseudo Genes (frameshifted)       :: 52 of 162
            Pseudo Genes (incomplete)         :: 129 of 162
            Pseudo Genes (internal stop)      :: 17 of 162
            Pseudo Genes (multiple problems)  :: 32 of 162
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5993255
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="RF2/1"
                     /isolation_source="Bleeding sap"
                     /host="Vitis vinifera"
                     /db_xref="taxon:373"
                     /geo_loc_name="Hungary"
                     /collection_date="2000"
WGS         MBFA02000001-MBFA02000086
WGS_SCAFLD  NZ_MBFA02000001-NZ_MBFA02000086
//
LOCUS       NZ_JAAMCN010000000   5722363 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium rubi strain Eu3-2RS, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAAMCN000000000
VERSION     NZ_JAAMCN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14165491
            Assembly: GCF_013320855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium rubi (Rhizobium rubi)
  ORGANISM  Agrobacterium rubi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5722363)
  AUTHORS   Weisberg,A.J., Davis,E.W. 2nd, Tabima,J., Belcher,M.S., Miller,M.,
            Kuo,C.H., Loper,J.E., Grunwald,N.J., Putnam,M.L. and Chang,J.H.
  TITLE     Unexpected conservation and global transmission of agrobacterial
            virulence plasmids
  JOURNAL   Science 368 (6495) (2020)
   PUBMED   32499412
REFERENCE   2  (bases 1 to 5722363)
  AUTHORS   Weisberg,A.J., Davis,E.W. II, Tabima,J.R., Belcher,M.S., Miller,M.,
            Kuo,C.-H., Loper,J.E., Grunwald,N.J., Putnam,M.L. and Chang,J.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-FEB-2020) Botany and Plant Pathology, Oregon State
            University, 2082 Cordley Hall, Oregon State University, Corvallis,
            OR 97330, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAAMCN000000000.1.
            The Agrobacterium rubi whole genome shotgun (WGS) project has the
            project accession NZ_JAAMCN000000000.  This version of the project
            (01) has the accession number NZ_JAAMCN010000000, and consists of
            sequences JAAMCN010000001-JAAMCN010000052.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 31x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013320855.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:46:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,459
            CDSs (total)                      :: 5,397
            Genes (coding)                    :: 5,280
            CDSs (with protein)               :: 5,280
            Genes (RNA)                       :: 62
            rRNAs                             :: 5, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 2, 2 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 117
            CDSs (without protein)            :: 117
            Pseudo Genes (ambiguous residues) :: 0 of 117
            Pseudo Genes (frameshifted)       :: 48 of 117
            Pseudo Genes (incomplete)         :: 92 of 117
            Pseudo Genes (internal stop)      :: 20 of 117
            Pseudo Genes (multiple problems)  :: 36 of 117
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5722363
                     /organism="Agrobacterium rubi"
                     /mol_type="genomic DNA"
                     /strain="Eu3-2RS"
                     /host="Euonymous"
                     /db_xref="taxon:28099"
WGS         JAAMCN010000001-JAAMCN010000052
WGS_SCAFLD  NZ_JAAMCN010000001-NZ_JAAMCN010000052
//
LOCUS       NZ_VEKY01000000      3688505 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Bacillus altitudinis strain DE0265, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VEKY00000000
VERSION     NZ_VEKY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11792425
            Assembly: GCF_007681425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus altitudinis
  ORGANISM  Bacillus altitudinis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (bases 1 to 3688505)
  AUTHORS   Zhang,C.
  TITLE     Temporal encoding of bacterial identity and traits in growth
            dynamics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3688505)
  AUTHORS   Song,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-MAY-2019) BGI-CNGB, BGI, No. 11, Beishan IZ., Yantian
            Dist., Shenzhen, Guangdong 518083, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VEKY00000000.1.
            The Bacillus altitudinis whole genome shotgun (WGS) project has the
            project accession NZ_VEKY00000000.  This version of the project
            (01) has the accession number NZ_VEKY01000000, and consists of
            sequences VEKY01000001-VEKY01000039.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGISEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007681425.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:18:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,805
            CDSs (total)                      :: 3,752
            Genes (coding)                    :: 3,717
            CDSs (with protein)               :: 3,717
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 44
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 8 of 35
            Pseudo Genes (incomplete)         :: 28 of 35
            Pseudo Genes (internal stop)      :: 3 of 35
            Pseudo Genes (multiple problems)  :: 4 of 35
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3688505
                     /organism="Bacillus altitudinis"
                     /mol_type="genomic DNA"
                     /strain="DE0265"
                     /isolation_source="environmental"
                     /db_xref="taxon:293387"
                     /geo_loc_name="USA: North Carolina, Durham"
                     /collection_date="2018-09-01"
WGS         VEKY01000001-VEKY01000039
WGS_SCAFLD  NZ_VEKY01000001-NZ_VEKY01000039
//
LOCUS       NZ_WPHI01000000      6080945 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain CG1118, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WPHI00000000
VERSION     NZ_WPHI00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13451340
            Assembly: GCF_009743925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 6080945)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Whole-genome sequencing of Allorhizobium vitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6080945)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2019) School of Life and Environmental Sciences,
            Deakin University, 75 Pidgons Road, Waurn Ponds, Victoria 3216,
            Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WPHI00000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_WPHI00000000.  This version of the project
            (01) has the accession number NZ_WPHI01000000, and consists of
            sequences WPHI01000001-WPHI01000097.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 41x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009743925.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:47:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,597
            CDSs (total)                      :: 5,543
            Genes (coding)                    :: 5,424
            CDSs (with protein)               :: 5,424
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 119
            CDSs (without protein)            :: 119
            Pseudo Genes (ambiguous residues) :: 0 of 119
            Pseudo Genes (frameshifted)       :: 32 of 119
            Pseudo Genes (incomplete)         :: 98 of 119
            Pseudo Genes (internal stop)      :: 10 of 119
            Pseudo Genes (multiple problems)  :: 17 of 119
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6080945
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="CG1118"
                     /isolation_source="Grape Gall"
                     /host="Vitis vinifera"
                     /db_xref="taxon:373"
                     /geo_loc_name="Turkey: Nevsehir"
                     /collection_date="1999"
                     /collected_by="Nihal Argun"
WGS         WPHI01000001-WPHI01000097
WGS_SCAFLD  NZ_WPHI01000001-NZ_WPHI01000097
//
LOCUS       NZ_LMAG01000000      3968587 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Bacillus amyloliquefaciens strain RHNK22, whole genome shotgun
            sequencing project.
ACCESSION   NZ_LMAG00000000
VERSION     NZ_LMAG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04009787
            Assembly: GCF_001431285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus amyloliquefaciens
  ORGANISM  Bacillus amyloliquefaciens
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus amyloliquefaciens group.
REFERENCE   1  (bases 1 to 3968587)
  AUTHORS   Narendra Kumar,P., Swapna,T.H., Sathi Reddy,K., Archana,K.,
            Nageshwar,L., Nalini,S., Khan,M.Y. and Hameeda,B.
  TITLE     Draft Genome Sequence of Bacillus amyloliquefaciens Strain RHNK22,
            Isolated from Rhizosphere with Biosurfactant (Surfactin, Iturin,
            and Fengycin) and Antifungal Activity
  JOURNAL   Genome Announc 4 (1), e01682-15 (2016)
   PUBMED   26823600
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3968587)
  AUTHORS   Bee,H., Papathoti,N.K., Priya,S. and Khan,M.Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-OCT-2015) Microbiology, Osmania Univeristy,
            University College of Science, Hyderabad 500007, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LMAG00000000.1.
            The Bacillus amyloliquefaciens whole genome shotgun (WGS) project
            has the project accession NZ_LMAG00000000.  This version of the
            project (01) has the accession number NZ_LMAG01000000, and consists
            of sequences LMAG01000001-LMAG01000029.
            
            ##Genome-Assembly-Data-START##
            Assembly Date             :: 2015
            Assembly Method           :: Velvet v. FEB-2015
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: GCF_000283695.1
            Genome Coverage           :: 500.0x
            Sequencing Technology     :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001431285.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:47:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,895
            Genes (coding)                    :: 3,806
            CDSs (with protein)               :: 3,806
            Genes (RNA)                       :: 92
            rRNAs                             :: 9, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 8, 1 (5S, 16S)
            tRNAs                             :: 75
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 89
            CDSs (without protein)            :: 89
            Pseudo Genes (ambiguous residues) :: 0 of 89
            Pseudo Genes (frameshifted)       :: 43 of 89
            Pseudo Genes (incomplete)         :: 57 of 89
            Pseudo Genes (internal stop)      :: 11 of 89
            Pseudo Genes (multiple problems)  :: 20 of 89
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3968587
                     /organism="Bacillus amyloliquefaciens"
                     /mol_type="genomic DNA"
                     /strain="RHNK22"
                     /isolation_source="rhizosphere"
                     /db_xref="taxon:1390"
                     /geo_loc_name="India: Telangana State"
WGS         LMAG01000001-LMAG01000029
WGS_SCAFLD  NZ_LMAG01000001-NZ_LMAG01000029
//
LOCUS       NZ_WPHW01000000      5838265 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain CG108, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WPHW00000000
VERSION     NZ_WPHW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13451326
            Assembly: GCF_009744215.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5838265)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Whole-genome sequencing of Allorhizobium vitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5838265)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2019) School of Life and Environmental Sciences,
            Deakin University, 75 Pidgons Road, Waurn Ponds, Victoria 3216,
            Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WPHW00000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_WPHW00000000.  This version of the project
            (01) has the accession number NZ_WPHW01000000, and consists of
            sequences WPHW01000001-WPHW01000068.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 44x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009744215.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:53:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,309
            CDSs (total)                      :: 5,255
            Genes (coding)                    :: 5,137
            CDSs (with protein)               :: 5,137
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 30 of 118
            Pseudo Genes (incomplete)         :: 94 of 118
            Pseudo Genes (internal stop)      :: 20 of 118
            Pseudo Genes (multiple problems)  :: 21 of 118
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5838265
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="CG108"
                     /isolation_source="Grape Gall"
                     /host="Vitis vinifera"
                     /db_xref="taxon:373"
                     /geo_loc_name="USA: New Mexico"
                     /collected_by="Tom Burr"
WGS         WPHW01000001-WPHW01000068
WGS_SCAFLD  NZ_WPHW01000001-NZ_WPHW01000068
//
LOCUS       NZ_VDTU01000000      3690939 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Bacillus altitudinis strain DE0597, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VDTU00000000
VERSION     NZ_VDTU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11792757
            Assembly: GCF_007671735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus altitudinis
  ORGANISM  Bacillus altitudinis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (bases 1 to 3690939)
  AUTHORS   Zhang,C.
  TITLE     Temporal encoding of bacterial identity and traits in growth
            dynamics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3690939)
  AUTHORS   Song,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-MAY-2019) BGI-CNGB, BGI, No. 11, Beishan IZ., Yantian
            Dist., Shenzhen, Guangdong 518083, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VDTU00000000.1.
            The Bacillus altitudinis whole genome shotgun (WGS) project has the
            project accession NZ_VDTU00000000.  This version of the project
            (01) has the accession number NZ_VDTU01000000, and consists of
            sequences VDTU01000001-VDTU01000023.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGISEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007671735.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:18:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,797
            CDSs (total)                      :: 3,742
            Genes (coding)                    :: 3,714
            CDSs (with protein)               :: 3,714
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 45
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 8 of 28
            Pseudo Genes (incomplete)         :: 24 of 28
            Pseudo Genes (internal stop)      :: 1 of 28
            Pseudo Genes (multiple problems)  :: 5 of 28
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3690939
                     /organism="Bacillus altitudinis"
                     /mol_type="genomic DNA"
                     /strain="DE0597"
                     /isolation_source="environmental"
                     /db_xref="taxon:293387"
                     /geo_loc_name="USA: North Carolina, Durham"
                     /collection_date="2018-09-01"
WGS         VDTU01000001-VDTU01000023
WGS_SCAFLD  NZ_VDTU01000001-NZ_VDTU01000023
//
LOCUS       NZ_JBJKJG010000000   3080354 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Bdellovibrio sp. SBM16, whole genome shotgun sequencing project.
ACCESSION   NZ_JBJKJG000000000
VERSION     NZ_JBJKJG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44701551
            Assembly: GCF_056175625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bdellovibrio sp. SBM16
  ORGANISM  Bdellovibrio sp. SBM16
            Bacteria; Pseudomonadati; Bdellovibrionota; Bdellovibrionia;
            Bdellovibrionales; Pseudobdellovibrionaceae; Bdellovibrio.
REFERENCE   1  (bases 1 to 3080354)
  AUTHORS   Maher,R.L., Wulbern,J., Zimmermann,J., Yeh,E., Benda,L., Repnik,U.,
            Fuss,J., Kunzel,S., Schulenburg,H., Bohannan,B.J.M., Adair,K.L. and
            Johnke,J.
  TITLE     Comparative analysis of novel Pseudobdellovibrionaceae genera and
            species yields insights into the genomics and evolution of
            bacterial predation mode
  JOURNAL   bioRxiv (2025)
   PUBMED   40027812
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3080354)
  AUTHORS   Maher,R.L., Wulbern,J., Zimmermann,J., Adair,K.L. and Johnke,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) Institute of Ecology and Evolution,
            University of Oregon, 5289 University of Oregon, Eugene, OR 97403,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKJG000000000.1.
            The Bdellovibrio sp. SBM16 whole genome shotgun (WGS) project has
            the project accession NZ_JBJKJG000000000.  This version of the
            project (01) has the accession number NZ_JBJKJG010000000, and
            consists of sequences JBJKJG010000001-JBJKJG010000016.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 249x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056175625.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 18:10:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,925
            CDSs (total)                      :: 2,886
            Genes (coding)                    :: 2,877
            CDSs (with protein)               :: 2,877
            Genes (RNA)                       :: 39
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 9
            CDSs (without protein)            :: 9
            Pseudo Genes (ambiguous residues) :: 0 of 9
            Pseudo Genes (frameshifted)       :: 0 of 9
            Pseudo Genes (incomplete)         :: 9 of 9
            Pseudo Genes (internal stop)      :: 0 of 9
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3080354
                     /organism="Bdellovibrio sp. SBM16"
                     /mol_type="genomic DNA"
                     /strain="SBM16"
                     /isolation_source="threespine stickleback aquaculture
                     water"
                     /db_xref="taxon:3379859"
                     /geo_loc_name="USA: Oregon,Eugene"
                     /collection_date="2021-11"
WGS         JBJKJG010000001-JBJKJG010000016
WGS_SCAFLD  NZ_JBJKJG010000001-NZ_JBJKJG010000016
//
LOCUS       NZ_VEKH01000000      3723350 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Bacillus altitudinis strain DE0335, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VEKH00000000
VERSION     NZ_VEKH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11792495
            Assembly: GCF_007681095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus altitudinis
  ORGANISM  Bacillus altitudinis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (bases 1 to 3723350)
  AUTHORS   Zhang,C.
  TITLE     Temporal encoding of bacterial identity and traits in growth
            dynamics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3723350)
  AUTHORS   Song,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-MAY-2019) BGI-CNGB, BGI, No. 11, Beishan IZ., Yantian
            Dist., Shenzhen, Guangdong 518083, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VEKH00000000.1.
            The Bacillus altitudinis whole genome shotgun (WGS) project has the
            project accession NZ_VEKH00000000.  This version of the project
            (01) has the accession number NZ_VEKH01000000, and consists of
            sequences VEKH01000001-VEKH01000077.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGISEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007681095.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:17:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,873
            CDSs (total)                      :: 3,818
            Genes (coding)                    :: 3,774
            CDSs (with protein)               :: 3,774
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1, 1, 2 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 44
            CDSs (without protein)            :: 44
            Pseudo Genes (ambiguous residues) :: 0 of 44
            Pseudo Genes (frameshifted)       :: 6 of 44
            Pseudo Genes (incomplete)         :: 38 of 44
            Pseudo Genes (internal stop)      :: 3 of 44
            Pseudo Genes (multiple problems)  :: 3 of 44
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3723350
                     /organism="Bacillus altitudinis"
                     /mol_type="genomic DNA"
                     /strain="DE0335"
                     /isolation_source="environmental"
                     /db_xref="taxon:293387"
                     /geo_loc_name="USA: North Carolina, Durham"
                     /collection_date="2018-09-01"
WGS         VEKH01000001-VEKH01000077
WGS_SCAFLD  NZ_VEKH01000001-NZ_VEKH01000077
//
LOCUS       NZ_JBWCAU010000000   3891623 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Bacillus velezensis strain k1 isolate xinjiang, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JBWCAU000000000
VERSION     NZ_JBWCAU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56487578
            Assembly: GCF_056175125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus velezensis
  ORGANISM  Bacillus velezensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus amyloliquefaciens group.
REFERENCE   1  (bases 1 to 3891623)
  AUTHORS   Song,L. and Du,D.D.
  TITLE     Whole Genome Sequencing and Analysis of Biological Control
            Potential of Bacillus velezensis K1 with Broad-Spectrum
            Antibacterial Properties
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3891623)
  AUTHORS   Song,L. and Du,D.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-MAR-2026) Analysis and Test Center, Xinjiang Academy
            of Agricultural and Reclamation Science, No. 221, Wuyi Road,
            Shihezi, Xinjiang 832000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWCAU000000000.1.
            The Bacillus velezensis whole genome shotgun (WGS) project has the
            project accession NZ_JBWCAU000000000.  This version of the project
            (01) has the accession number NZ_JBWCAU010000000, and consists of
            sequences JBWCAU010000001-JBWCAU010000014.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Xinjiang Academy of
            Agricultural and Reclamation Sciences No. 221, Wuyi Road, Shihezi
            City, Xinjiang Uygur Autonomous Region, China.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 345.0x
            Sequencing Technology  :: PacBio RSII; Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056175125.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:53:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,883
            CDSs (total)                      :: 3,787
            Genes (coding)                    :: 3,686
            CDSs (with protein)               :: 3,686
            Genes (RNA)                       :: 96
            rRNAs                             :: 8, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 6, 2 (5S, 16S)
            tRNAs                             :: 80
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 101
            CDSs (without protein)            :: 101
            Pseudo Genes (ambiguous residues) :: 0 of 101
            Pseudo Genes (frameshifted)       :: 60 of 101
            Pseudo Genes (incomplete)         :: 64 of 101
            Pseudo Genes (internal stop)      :: 10 of 101
            Pseudo Genes (multiple problems)  :: 30 of 101
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3891623
                     /organism="Bacillus velezensis"
                     /mol_type="genomic DNA"
                     /strain="k1"
                     /isolate="xinjiang"
                     /isolation_source="honeycomb"
                     /host="free living"
                     /db_xref="taxon:492670"
                     /geo_loc_name="China: Shihezi,xinjiang Uygur Autonomous
                     Region"
                     /collection_date="2024-08-05"
WGS         JBWCAU010000001-JBWCAU010000014
WGS_SCAFLD  NZ_CM149696
WGS_SCAFLD  NZ_JBWCAU010000002-NZ_JBWCAU010000014
//
LOCUS       NZ_VEJU01000000      3778406 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Bacillus altitudinis strain DE0386, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VEJU00000000
VERSION     NZ_VEJU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11792546
            Assembly: GCF_007676435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus altitudinis
  ORGANISM  Bacillus altitudinis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (bases 1 to 3778406)
  AUTHORS   Zhang,C.
  TITLE     Temporal encoding of bacterial identity and traits in growth
            dynamics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3778406)
  AUTHORS   Song,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-MAY-2019) BGI-CNGB, BGI, No. 11, Beishan IZ., Yantian
            Dist., Shenzhen, Guangdong 518083, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VEJU00000000.1.
            The Bacillus altitudinis whole genome shotgun (WGS) project has the
            project accession NZ_VEJU00000000.  This version of the project
            (01) has the accession number NZ_VEJU01000000, and consists of
            sequences VEJU01000001-VEJU01000134.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGISEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007676435.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:18:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,918
            CDSs (total)                      :: 3,860
            Genes (coding)                    :: 3,821
            CDSs (with protein)               :: 3,821
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 3, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 6 of 39
            Pseudo Genes (incomplete)         :: 33 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 6 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3778406
                     /organism="Bacillus altitudinis"
                     /mol_type="genomic DNA"
                     /strain="DE0386"
                     /isolation_source="environmental"
                     /db_xref="taxon:293387"
                     /geo_loc_name="USA: North Carolina, Durham"
                     /collection_date="2018-09-01"
WGS         VEJU01000001-VEJU01000134
WGS_SCAFLD  NZ_VEJU01000001-NZ_VEJU01000134
//
LOCUS       NZ_WSFS01000000      4729330 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Aeromonas veronii strain B48, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WSFS00000000
VERSION     NZ_WSFS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13518075
            Assembly: GCF_009765645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Aeromonas veronii (Aeromonas ichthiosmia)
  ORGANISM  Aeromonas veronii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Aeromonadales; Aeromonadaceae; Aeromonas.
REFERENCE   1  (bases 1 to 4729330)
  AUTHORS   Kato,R.B., Miranda,F.M., Seyffert,N., Castro,T.P., Souza,R.S.,
            Gomide,A.P., Gouveia,G.V., Gouveia,J.S., Azevedo,V.C., Costa,M. and
            Ramos,R.J.
  TITLE     Comparative genome analysis of Aeromonas from aquatic organisms and
            environment in northestern Brazil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4729330)
  AUTHORS   Kato,R.B., Miranda,F.M., Seyffert,N., Castro,T.P., Souza,R.S.,
            Gomide,A.P., Gouveia,G.V., Gouveia,J.S., Azevedo,V.C., Costa,M. and
            Ramos,R.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-DEC-2019) Department of Genetics, Ecology, and
            Evolution, UFMG, Av Antonio Carlos 6627, Pampulha, Belo Horizonte,
            Minhas Gerais 31270-901, Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WSFS00000000.1.
            The Aeromonas veronii whole genome shotgun (WGS) project has the
            project accession NZ_WSFS00000000.  This version of the project
            (01) has the accession number NZ_WSFS01000000, and consists of
            sequences WSFS01000001-WSFS01000049.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.0; Edena v. 3.131028
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 271.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009765645.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:42:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,486
            CDSs (total)                      :: 4,338
            Genes (coding)                    :: 4,275
            CDSs (with protein)               :: 4,275
            Genes (RNA)                       :: 148
            rRNAs                             :: 9, 7, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 1 (5S, 23S)
            partial rRNAs                     :: 7, 4 (16S, 23S)
            tRNAs                             :: 120
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 16 of 63
            Pseudo Genes (incomplete)         :: 48 of 63
            Pseudo Genes (internal stop)      :: 13 of 63
            Pseudo Genes (multiple problems)  :: 11 of 63
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4729330
                     /organism="Aeromonas veronii"
                     /mol_type="genomic DNA"
                     /strain="B48"
                     /isolation_source="aquaculture system"
                     /host="Phractocephalus hemioliopterus"
                     /db_xref="taxon:654"
                     /geo_loc_name="Brazil: Petrolina"
                     /lat_lon="9.388961 S 40.503111 W"
                     /collection_date="2009-08"
WGS         WSFS01000001-WSFS01000049
WGS_SCAFLD  NZ_WSFS01000001-NZ_WSFS01000049
//
LOCUS       NZ_JAANSA010000000   5571766 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium rubi strain Eu3-2NK, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAANSA000000000
VERSION     NZ_JAANSA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14165485
            Assembly: GCF_013320835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium rubi (Rhizobium rubi)
  ORGANISM  Agrobacterium rubi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5571766)
  AUTHORS   Weisberg,A.J., Davis,E.W. 2nd, Tabima,J., Belcher,M.S., Miller,M.,
            Kuo,C.H., Loper,J.E., Grunwald,N.J., Putnam,M.L. and Chang,J.H.
  TITLE     Unexpected conservation and global transmission of agrobacterial
            virulence plasmids
  JOURNAL   Science 368 (6495) (2020)
   PUBMED   32499412
REFERENCE   2  (bases 1 to 5571766)
  AUTHORS   Weisberg,A.J., Davis,E.W. II, Tabima,J.R., Belcher,M.S., Miller,M.,
            Kuo,C.-H., Loper,J.E., Grunwald,N.J., Putnam,M.L. and Chang,J.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-FEB-2020) Botany and Plant Pathology, Oregon State
            University, 2082 Cordley Hall, Oregon State University, Corvallis,
            OR 97330, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAANSA000000000.1.
            The Agrobacterium rubi whole genome shotgun (WGS) project has the
            project accession NZ_JAANSA000000000.  This version of the project
            (01) has the accession number NZ_JAANSA010000000, and consists of
            sequences JAANSA010000001-JAANSA010000037.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 44x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013320835.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:40:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,334
            CDSs (total)                      :: 5,276
            Genes (coding)                    :: 5,166
            CDSs (with protein)               :: 5,166
            Genes (RNA)                       :: 58
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 110
            CDSs (without protein)            :: 110
            Pseudo Genes (ambiguous residues) :: 0 of 110
            Pseudo Genes (frameshifted)       :: 47 of 110
            Pseudo Genes (incomplete)         :: 86 of 110
            Pseudo Genes (internal stop)      :: 19 of 110
            Pseudo Genes (multiple problems)  :: 35 of 110
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5571766
                     /organism="Agrobacterium rubi"
                     /mol_type="genomic DNA"
                     /strain="Eu3-2NK"
                     /host="Euonymous"
                     /db_xref="taxon:28099"
WGS         JAANSA010000001-JAANSA010000037
WGS_SCAFLD  NZ_JAANSA010000001-NZ_JAANSA010000037
//
LOCUS       NZ_CABEHU010000000   3746007 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Bacillus altitudinis isolate Bacillus xiamenensis strain 19_A1,
            whole genome shotgun sequencing project.
ACCESSION   NZ_CABEHU000000000
VERSION     NZ_CABEHU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA5608154
            Assembly: GCF_901542325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus altitudinis
  ORGANISM  Bacillus altitudinis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (bases 1 to 3746007)
  AUTHORS   Comba B,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAY-2019) Pontificia Universidad Javeriana, UNIDIA,
            Carrera 7 No. 40 - 62, Colombia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CABEHU000000000.1.
            The Bacillus altitudinis whole genome shotgun (WGS) project has the
            project accession NZ_CABEHU000000000.  This version of the project
            (01) has the accession number NZ_CABEHU010000000, and consists of
            sequences CABEHU010000001-CABEHU010000215.
            The organism was changed from 'Bacillus xiamenensis' to 'Bacillus
            altitudinis' in July  2020.
            
            ##Taxonomic-Update-Statistics-START##
            This Genome (query) :: GCA_901542325.1
            Current Name        :: Bacillus altitudinis
            Previous Name       :: Bacillus xiamenensis
            Date Updated        :: 2020-07-31
            Analysis Type       :: Average Nucleotide Identity (ANI)
            Analysis 1 (A1)     :: Query vs. TYPE genome for current name
            A1 Genome (subject) :: GCA_000691145.1
            A1 Name             :: Bacillus altitudinis
            A1 ANI              :: 98.48%
            A1 Query Coverage   :: 92.69%
            A1 Subject Coverage :: 94.38%
            Analysis 2 (A2)     :: Query vs. TYPE genome for previous name
            A2 Genome (subject) :: GCA_000300535.1
            A2 Name             :: Bacillus xiamenensis
            A2 ANI              :: 91.53%
            A2 Query Coverage   :: 85.58%
            A2 Subject Coverage :: 88.75%
            ##Taxonomic-Update-Statistics-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_901542325.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:53:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,868
            CDSs (total)                      :: 3,821
            Genes (coding)                    :: 3,783
            CDSs (with protein)               :: 3,783
            Genes (RNA)                       :: 47
            rRNAs                             :: 3, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2, 3 (5S, 16S)
            tRNAs                             :: 35
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 38
            CDSs (without protein)            :: 38
            Pseudo Genes (ambiguous residues) :: 0 of 38
            Pseudo Genes (frameshifted)       :: 10 of 38
            Pseudo Genes (incomplete)         :: 29 of 38
            Pseudo Genes (internal stop)      :: 5 of 38
            Pseudo Genes (multiple problems)  :: 5 of 38
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3746007
                     /organism="Bacillus altitudinis"
                     /mol_type="genomic DNA"
                     /isolate="Bacillus xiamenensis strain 19_A1"
                     /isolation_source="macroalgae"
                     /db_xref="taxon:293387"
WGS         CABEHU010000001-CABEHU010000215
WGS_SCAFLD  NZ_CABEHU010000001-NZ_CABEHU010000215
//
LOCUS       NZ_VEMF01000000      3916584 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Bacillus altitudinis strain DE0090, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VEMF00000000
VERSION     NZ_VEMF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11792250
            Assembly: GCF_007682105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus altitudinis
  ORGANISM  Bacillus altitudinis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (bases 1 to 3916584)
  AUTHORS   Zhang,C.
  TITLE     Temporal encoding of bacterial identity and traits in growth
            dynamics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3916584)
  AUTHORS   Song,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-MAY-2019) BGI-CNGB, BGI, No. 11, Beishan IZ., Yantian
            Dist., Shenzhen, Guangdong 518083, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VEMF00000000.1.
            The Bacillus altitudinis whole genome shotgun (WGS) project has the
            project accession NZ_VEMF00000000.  This version of the project
            (01) has the accession number NZ_VEMF01000000, and consists of
            sequences VEMF01000001-VEMF01000041.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGISEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007682105.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:16:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,135
            CDSs (total)                      :: 4,052
            Genes (coding)                    :: 4,016
            CDSs (with protein)               :: 4,016
            Genes (RNA)                       :: 83
            rRNAs                             :: 4, 6, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 4, 5 (5S, 16S)
            tRNAs                             :: 67
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 13 of 36
            Pseudo Genes (incomplete)         :: 23 of 36
            Pseudo Genes (internal stop)      :: 5 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3916584
                     /organism="Bacillus altitudinis"
                     /mol_type="genomic DNA"
                     /strain="DE0090"
                     /isolation_source="environmental"
                     /db_xref="taxon:293387"
                     /geo_loc_name="USA: North Carolina, Durham"
                     /collection_date="2018-09-01"
WGS         VEMF01000001-VEMF01000041
WGS_SCAFLD  NZ_VEMF01000001-NZ_VEMF01000041
//
LOCUS       NZ_VEKA01000000      3731420 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Bacillus altitudinis strain DE0366, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VEKA00000000
VERSION     NZ_VEKA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11792526
            Assembly: GCF_007676515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus altitudinis
  ORGANISM  Bacillus altitudinis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (bases 1 to 3731420)
  AUTHORS   Zhang,C.
  TITLE     Temporal encoding of bacterial identity and traits in growth
            dynamics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3731420)
  AUTHORS   Song,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-MAY-2019) BGI-CNGB, BGI, No. 11, Beishan IZ., Yantian
            Dist., Shenzhen, Guangdong 518083, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VEKA00000000.1.
            The Bacillus altitudinis whole genome shotgun (WGS) project has the
            project accession NZ_VEKA00000000.  This version of the project
            (01) has the accession number NZ_VEKA01000000, and consists of
            sequences VEKA01000001-VEKA01000111.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGISEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007676515.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:21:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,893
            CDSs (total)                      :: 3,837
            Genes (coding)                    :: 3,789
            CDSs (with protein)               :: 3,789
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 48
            CDSs (without protein)            :: 48
            Pseudo Genes (ambiguous residues) :: 0 of 48
            Pseudo Genes (frameshifted)       :: 6 of 48
            Pseudo Genes (incomplete)         :: 41 of 48
            Pseudo Genes (internal stop)      :: 5 of 48
            Pseudo Genes (multiple problems)  :: 4 of 48
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3731420
                     /organism="Bacillus altitudinis"
                     /mol_type="genomic DNA"
                     /strain="DE0366"
                     /isolation_source="environmental"
                     /db_xref="taxon:293387"
                     /geo_loc_name="USA: North Carolina, Durham"
                     /collection_date="2018-09-01"
WGS         VEKA01000001-VEKA01000111
WGS_SCAFLD  NZ_VEKA01000001-NZ_VEKA01000111
//
LOCUS       NZ_JAANSB010000000   5584087 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium rubi strain Eu2-1NK, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAANSB000000000
VERSION     NZ_JAANSB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14165489
            Assembly: GCF_013320895.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium rubi (Rhizobium rubi)
  ORGANISM  Agrobacterium rubi
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5584087)
  AUTHORS   Weisberg,A.J., Davis,E.W. 2nd, Tabima,J., Belcher,M.S., Miller,M.,
            Kuo,C.H., Loper,J.E., Grunwald,N.J., Putnam,M.L. and Chang,J.H.
  TITLE     Unexpected conservation and global transmission of agrobacterial
            virulence plasmids
  JOURNAL   Science 368 (6495) (2020)
   PUBMED   32499412
REFERENCE   2  (bases 1 to 5584087)
  AUTHORS   Weisberg,A.J., Davis,E.W. II, Tabima,J.R., Belcher,M.S., Miller,M.,
            Kuo,C.-H., Loper,J.E., Grunwald,N.J., Putnam,M.L. and Chang,J.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-FEB-2020) Botany and Plant Pathology, Oregon State
            University, 2082 Cordley Hall, Oregon State University, Corvallis,
            OR 97330, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAANSB000000000.1.
            The Agrobacterium rubi whole genome shotgun (WGS) project has the
            project accession NZ_JAANSB000000000.  This version of the project
            (01) has the accession number NZ_JAANSB010000000, and consists of
            sequences JAANSB010000001-JAANSB010000033.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 58x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013320895.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:52:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,264
            CDSs (total)                      :: 5,201
            Genes (coding)                    :: 5,111
            CDSs (with protein)               :: 5,111
            Genes (RNA)                       :: 63
            rRNAs                             :: 5, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 4, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 90
            CDSs (without protein)            :: 90
            Pseudo Genes (ambiguous residues) :: 0 of 90
            Pseudo Genes (frameshifted)       :: 42 of 90
            Pseudo Genes (incomplete)         :: 71 of 90
            Pseudo Genes (internal stop)      :: 17 of 90
            Pseudo Genes (multiple problems)  :: 33 of 90
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5584087
                     /organism="Agrobacterium rubi"
                     /mol_type="genomic DNA"
                     /strain="Eu2-1NK"
                     /host="Euonymous"
                     /db_xref="taxon:28099"
WGS         JAANSB010000001-JAANSB010000033
WGS_SCAFLD  NZ_JAANSB010000001-NZ_JAANSB010000033
//
LOCUS       NZ_VEKR01000000      3764485 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Bacillus altitudinis strain DE0290, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VEKR00000000
VERSION     NZ_VEKR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11792450
            Assembly: GCF_007681315.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus altitudinis
  ORGANISM  Bacillus altitudinis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (bases 1 to 3764485)
  AUTHORS   Zhang,C.
  TITLE     Temporal encoding of bacterial identity and traits in growth
            dynamics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3764485)
  AUTHORS   Song,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-MAY-2019) BGI-CNGB, BGI, No. 11, Beishan IZ., Yantian
            Dist., Shenzhen, Guangdong 518083, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VEKR00000000.1.
            The Bacillus altitudinis whole genome shotgun (WGS) project has the
            project accession NZ_VEKR00000000.  This version of the project
            (01) has the accession number NZ_VEKR01000000, and consists of
            sequences VEKR01000001-VEKR01000037.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGISEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007681315.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:14:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,850
            CDSs (total)                      :: 3,795
            Genes (coding)                    :: 3,758
            CDSs (with protein)               :: 3,758
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 2 (5S, 16S)
            tRNAs                             :: 46
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 13 of 37
            Pseudo Genes (incomplete)         :: 24 of 37
            Pseudo Genes (internal stop)      :: 6 of 37
            Pseudo Genes (multiple problems)  :: 4 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3764485
                     /organism="Bacillus altitudinis"
                     /mol_type="genomic DNA"
                     /strain="DE0290"
                     /isolation_source="environmental"
                     /db_xref="taxon:293387"
                     /geo_loc_name="USA: North Carolina, Durham"
                     /collection_date="2018-09-01"
WGS         VEKR01000001-VEKR01000037
WGS_SCAFLD  NZ_VEKR01000001-NZ_VEKR01000037
//
LOCUS       NZ_JBJKJH010000000   3209714 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Bdellovibrio sp. ZFWA1, whole genome shotgun sequencing project.
ACCESSION   NZ_JBJKJH000000000
VERSION     NZ_JBJKJH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44701550
            Assembly: GCF_056175665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bdellovibrio sp. ZFWA1
  ORGANISM  Bdellovibrio sp. ZFWA1
            Bacteria; Pseudomonadati; Bdellovibrionota; Bdellovibrionia;
            Bdellovibrionales; Pseudobdellovibrionaceae; Bdellovibrio.
REFERENCE   1  (bases 1 to 3209714)
  AUTHORS   Maher,R.L., Wulbern,J., Zimmermann,J., Yeh,E., Benda,L., Repnik,U.,
            Fuss,J., Kunzel,S., Schulenburg,H., Bohannan,B.J.M., Adair,K.L. and
            Johnke,J.
  TITLE     Comparative analysis of novel Pseudobdellovibrionaceae genera and
            species yields insights into the genomics and evolution of
            bacterial predation mode
  JOURNAL   bioRxiv (2025)
   PUBMED   40027812
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3209714)
  AUTHORS   Maher,R.L., Wulbern,J., Zimmermann,J., Adair,K.L. and Johnke,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) Institute of Ecology and Evolution,
            University of Oregon, 5289 University of Oregon, Eugene, OR 97403,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKJH000000000.1.
            The Bdellovibrio sp. ZFWA1 whole genome shotgun (WGS) project has
            the project accession NZ_JBJKJH000000000.  This version of the
            project (01) has the accession number NZ_JBJKJH010000000, and
            consists of sequences JBJKJH010000001-JBJKJH010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 291x
            Sequencing Technology  :: Illumina NextSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056175665.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 18:13:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,130
            CDSs (total)                      :: 3,083
            Genes (coding)                    :: 3,068
            CDSs (with protein)               :: 3,068
            Genes (RNA)                       :: 47
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 15
            CDSs (without protein)            :: 15
            Pseudo Genes (ambiguous residues) :: 0 of 15
            Pseudo Genes (frameshifted)       :: 1 of 15
            Pseudo Genes (incomplete)         :: 14 of 15
            Pseudo Genes (internal stop)      :: 0 of 15
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3209714
                     /organism="Bdellovibrio sp. ZFWA1"
                     /mol_type="genomic DNA"
                     /strain="ZFWA1"
                     /isolation_source="zebrafish aquaculture water"
                     /db_xref="taxon:3379858"
                     /geo_loc_name="USA: Oregon,Eugene"
                     /collection_date="2022-04"
WGS         JBJKJH010000001-JBJKJH010000004
WGS_SCAFLD  NZ_JBJKJH010000001-NZ_JBJKJH010000004
//
LOCUS       NZ_VTEM01000000      3826332 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Bacillus altitudinis strain CH156_5T, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VTEM00000000
VERSION     NZ_VTEM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12612709
            Assembly: GCF_008180475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus altitudinis
  ORGANISM  Bacillus altitudinis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (bases 1 to 3826332)
  AUTHORS   Olmedo-Alvarez,G.
  TITLE     Bacillus genomes from the desert of Cuatro Cienegas, Coahuila
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3826332)
  AUTHORS   Olmedo-Alvarez,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-AUG-2019) Ingenieria Genetica, Cinvestav, Libramiento
            Norte Carretera Irapuato Leon Kilometro 9.6, Carr Panamericana
            Irapuato Leon, Irapuato 36824, Mexico
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VTEM00000000.1.
            The Bacillus altitudinis whole genome shotgun (WGS) project has the
            project accession NZ_VTEM00000000.  This version of the project
            (01) has the accession number NZ_VTEM01000000, and consists of
            sequences VTEM01000001-VTEM01000056.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: A5-miseq v. 2018
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_008180475.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:23:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,068
            CDSs (total)                      :: 3,955
            Genes (coding)                    :: 3,874
            CDSs (with protein)               :: 3,874
            Genes (RNA)                       :: 113
            rRNAs                             :: 8, 10, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 9, 6 (16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 36 of 81
            Pseudo Genes (incomplete)         :: 56 of 81
            Pseudo Genes (internal stop)      :: 8 of 81
            Pseudo Genes (multiple problems)  :: 17 of 81
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3826332
                     /organism="Bacillus altitudinis"
                     /mol_type="genomic DNA"
                     /strain="CH156_5T"
                     /isolation_source="sediment"
                     /db_xref="taxon:293387"
                     /geo_loc_name="Mexico: desert of Cuatro Cienegas,
                     Coahuila"
WGS         VTEM01000001-VTEM01000056
WGS_SCAFLD  NZ_VTEM01000001-NZ_VTEM01000056
//
LOCUS       NZ_VTQS01000000      3703740 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Bacillus altitudinis strain DE0251, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VTQS00000000
VERSION     NZ_VTQS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11792411
            Assembly: GCF_008764185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus altitudinis
  ORGANISM  Bacillus altitudinis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (bases 1 to 3703740)
  AUTHORS   Zhang,C.
  TITLE     Temporal encoding of bacterial identity and traits in growth
            dynamics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3703740)
  AUTHORS   Song,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-AUG-2019) BGI-CNGB, BGI, No. 11, Beishan IZ., Yantian
            Dist., Shenzhen, Guangdong 518083, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VTQS00000000.1.
            The Bacillus altitudinis whole genome shotgun (WGS) project has the
            project accession NZ_VTQS00000000.  This version of the project
            (01) has the accession number NZ_VTQS01000000, and consists of
            sequences VTQS01000001-VTQS01000026.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Assembly Name          :: FS383
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGISEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_008764185.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:16:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,836
            CDSs (total)                      :: 3,778
            Genes (coding)                    :: 3,745
            CDSs (with protein)               :: 3,745
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 6, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 6, 3 (16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 33
            CDSs (without protein)            :: 33
            Pseudo Genes (ambiguous residues) :: 0 of 33
            Pseudo Genes (frameshifted)       :: 6 of 33
            Pseudo Genes (incomplete)         :: 27 of 33
            Pseudo Genes (internal stop)      :: 3 of 33
            Pseudo Genes (multiple problems)  :: 3 of 33
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3703740
                     /organism="Bacillus altitudinis"
                     /mol_type="genomic DNA"
                     /strain="DE0251"
                     /isolation_source="environmental"
                     /db_xref="taxon:293387"
                     /geo_loc_name="USA: North Carolina, Durham"
                     /collection_date="2018-09-01"
WGS         VTQS01000001-VTQS01000026
WGS_SCAFLD  NZ_VTQS01000001-NZ_VTQS01000026
//
LOCUS       NZ_JAEUAU010000000   5294749 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium pusense strain HU21, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAEUAU000000000
VERSION     NZ_JAEUAU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17390261
            Assembly: GCF_019511505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium pusense
  ORGANISM  Agrobacterium pusense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5294749)
  AUTHORS   Chalasani,D., Basu,A., Pullabhotla,S.V.S.R.N., Jorrin,B.,
            Neal,A.L., Poole,P.S., Podile,A.R. and Tkacz,A.
  TITLE     Poor Competitiveness of Bradyrhizobium in Pigeon Pea Root
            Colonization in Indian Soils
  JOURNAL   mBio 12 (4), e0042321 (2021)
   PUBMED   34225488
REFERENCE   2  (bases 1 to 5294749)
  AUTHORS   Chalasani,D., Basu,A., Pullabhotla,S.V., Jorrin,B., Neal,A.L.,
            Poole,P.S., Podile,A.R. and Tkacz,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-JAN-2021) Department of Plant Sciences, University of
            Oxford, South Parks Road, Oxford OX1 3RB, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAEUAU000000000.1.
            The Agrobacterium pusense whole genome shotgun (WGS) project has
            the project accession NZ_JAEUAU000000000.  This version of the
            project (01) has the accession number NZ_JAEUAU010000000, and
            consists of sequences JAEUAU010000001-JAEUAU010000032.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 29-MAR-2019
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_019511505.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:37:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,010
            CDSs (total)                      :: 4,951
            Genes (coding)                    :: 4,895
            CDSs (with protein)               :: 4,895
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 56
            CDSs (without protein)            :: 56
            Pseudo Genes (ambiguous residues) :: 0 of 56
            Pseudo Genes (frameshifted)       :: 25 of 56
            Pseudo Genes (incomplete)         :: 40 of 56
            Pseudo Genes (internal stop)      :: 10 of 56
            Pseudo Genes (multiple problems)  :: 15 of 56
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5294749
                     /organism="Agrobacterium pusense"
                     /mol_type="genomic DNA"
                     /strain="HU21"
                     /isolation_source="root"
                     /host="Cajanus cajan"
                     /db_xref="taxon:648995"
                     /geo_loc_name="India: Shankarpally, Rangareddy, Telangana"
                     /collection_date="2017-06"
WGS         JAEUAU010000001-JAEUAU010000032
WGS_SCAFLD  NZ_JAEUAU010000001-NZ_JAEUAU010000032
//
LOCUS       NZ_JBCGBC010000000   4363473 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Bacillus licheniformis strain TRQ32, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBCGBC000000000
VERSION     NZ_JBCGBC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40604930
            Assembly: GCF_049801175.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus licheniformis
  ORGANISM  Bacillus licheniformis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (bases 1 to 4363473)
  AUTHORS   Figueroa-Brambila,K.M., Montoya-Martinez,A.C., Campos-Avelar,I.,
            Parra-Cota,F.I. and de los Santos-Villalobos,S.
  TITLE     Genome mining for deciphering potential biocontrol action modes of
            Bacillus licheniformis TRQ32 against wheat (Triticum turgidum
            subsp. durum) phytopathogenic fungi
  JOURNAL   Discov Sustain 6 (1) (2025)
  REMARK    DOI: 10.1007/s43621-025-01238-1
REFERENCE   2  (bases 1 to 4363473)
  AUTHORS   Figueroa-Brambila,K.M., Montoya-Martinez,A.C. and De Los
            Santos-Villalobos,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAR-2024) Laboratorio de Biotecnologia del Recurso
            Microbiano, Instituto Tecnologico de Sonora, 5 De Febrero 818 Sur,
            Cd. Obregon, Sonora 85000, Mexico
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCGBC000000000.1.
            The Bacillus licheniformis whole genome shotgun (WGS) project has
            the project accession NZ_JBCGBC000000000.  This version of the
            project (01) has the accession number NZ_JBCGBC010000000, and
            consists of sequences JBCGBC010000001-JBCGBC010000028.
            Bacteria and source DNA available from Culture Collection of Native
            Soil and Endophytic Microorganisms (COLMENA), Mexico.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2024
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 119.761x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_049801175.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:50:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,651
            CDSs (total)                      :: 4,540
            Genes (coding)                    :: 4,425
            CDSs (with protein)               :: 4,425
            Genes (RNA)                       :: 111
            rRNAs                             :: 8, 12, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 7 (5S)
            partial rRNAs                     :: 1, 12, 7 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 115
            CDSs (without protein)            :: 115
            Pseudo Genes (ambiguous residues) :: 0 of 115
            Pseudo Genes (frameshifted)       :: 54 of 115
            Pseudo Genes (incomplete)         :: 63 of 115
            Pseudo Genes (internal stop)      :: 13 of 115
            Pseudo Genes (multiple problems)  :: 15 of 115
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4363473
                     /organism="Bacillus licheniformis"
                     /mol_type="genomic DNA"
                     /strain="TRQ32"
                     /isolation_source="rhizosphere"
                     /host="wheat"
                     /db_xref="taxon:1402"
                     /geo_loc_name="Mexico: Yaqui Valley"
                     /collection_date="2014"
WGS         JBCGBC010000001-JBCGBC010000028
WGS_SCAFLD  NZ_JBCGBC010000001-NZ_JBCGBC010000028
//
LOCUS       NZ_JAAIFO010000000   3684860 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Bacillus altitudinis strain B1S54.2_3W19, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAAIFO000000000
VERSION     NZ_JAAIFO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14083405
            Assembly: GCF_010747395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus altitudinis
  ORGANISM  Bacillus altitudinis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (bases 1 to 3684860)
  AUTHORS   Farias,P.
  TITLE     Metabolic response to tellurium in tellurite resistant and reducing
            bacteria in a proteomic era
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3684860)
  AUTHORS   Farias,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-FEB-2020) Life Sciences Department, University of
            Coimbra, Rua da Matematica, Coimbra 3000-276, Portugal
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAAIFO000000000.1.
            The Bacillus altitudinis whole genome shotgun (WGS) project has the
            project accession NZ_JAAIFO000000000.  This version of the project
            (01) has the accession number NZ_JAAIFO010000000, and consists of
            sequences JAAIFO010000001-JAAIFO010000054.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from UC-CCB87.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2018
            Assembly Method        :: SPAdes v. 9.5.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 99.3x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_010747395.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:04:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,791
            CDSs (total)                      :: 3,723
            Genes (coding)                    :: 3,695
            CDSs (with protein)               :: 3,695
            Genes (RNA)                       :: 68
            rRNAs                             :: 3, 1 (5S, 16S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 59
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 8 of 28
            Pseudo Genes (incomplete)         :: 20 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 5 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3684860
                     /organism="Bacillus altitudinis"
                     /mol_type="genomic DNA"
                     /strain="B1S54.2_3W19"
                     /isolation_source="mining residue"
                     /db_xref="taxon:293387"
                     /geo_loc_name="Portugal"
                     /collection_date="2016-09-12"
WGS         JAAIFO010000001-JAAIFO010000054
WGS_SCAFLD  NZ_JAAIFO010000001-NZ_JAAIFO010000054
//
LOCUS       NZ_VEKX01000000      3765237 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Bacillus altitudinis strain DE0268, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VEKX00000000
VERSION     NZ_VEKX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11792428
            Assembly: GCF_007681435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus altitudinis
  ORGANISM  Bacillus altitudinis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (bases 1 to 3765237)
  AUTHORS   Zhang,C.
  TITLE     Temporal encoding of bacterial identity and traits in growth
            dynamics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3765237)
  AUTHORS   Song,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-MAY-2019) BGI-CNGB, BGI, No. 11, Beishan IZ., Yantian
            Dist., Shenzhen, Guangdong 518083, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VEKX00000000.1.
            The Bacillus altitudinis whole genome shotgun (WGS) project has the
            project accession NZ_VEKX00000000.  This version of the project
            (01) has the accession number NZ_VEKX01000000, and consists of
            sequences VEKX01000001-VEKX01000038.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGISEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007681435.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:21:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,851
            CDSs (total)                      :: 3,796
            Genes (coding)                    :: 3,753
            CDSs (with protein)               :: 3,753
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 2 (5S, 16S)
            tRNAs                             :: 46
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 13 of 43
            Pseudo Genes (incomplete)         :: 30 of 43
            Pseudo Genes (internal stop)      :: 6 of 43
            Pseudo Genes (multiple problems)  :: 4 of 43
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3765237
                     /organism="Bacillus altitudinis"
                     /mol_type="genomic DNA"
                     /strain="DE0268"
                     /isolation_source="environmental"
                     /db_xref="taxon:293387"
                     /geo_loc_name="USA: North Carolina, Durham"
                     /collection_date="2018-09-01"
WGS         VEKX01000001-VEKX01000038
WGS_SCAFLD  NZ_VEKX01000001-NZ_VEKX01000038
//
LOCUS       NZ_JAAMOR010000000   5258065 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium pusense strain 17-1009, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAAMOR000000000
VERSION     NZ_JAAMOR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14165621
            Assembly: GCF_013320535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium pusense
  ORGANISM  Agrobacterium pusense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5258065)
  AUTHORS   Weisberg,A.J., Davis,E.W. 2nd, Tabima,J., Belcher,M.S., Miller,M.,
            Kuo,C.H., Loper,J.E., Grunwald,N.J., Putnam,M.L. and Chang,J.H.
  TITLE     Unexpected conservation and global transmission of agrobacterial
            virulence plasmids
  JOURNAL   Science 368 (6495) (2020)
   PUBMED   32499412
REFERENCE   2  (bases 1 to 5258065)
  AUTHORS   Weisberg,A.J., Davis,E.W. II, Tabima,J.R., Belcher,M.S., Miller,M.,
            Kuo,C.-H., Loper,J.E., Grunwald,N.J., Putnam,M.L. and Chang,J.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-FEB-2020) Botany and Plant Pathology, Oregon State
            University, 2082 Cordley Hall, Oregon State University, Corvallis,
            OR 97330, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAAMOR000000000.1.
            The Agrobacterium pusense whole genome shotgun (WGS) project has
            the project accession NZ_JAAMOR000000000.  This version of the
            project (01) has the accession number NZ_JAAMOR010000000, and
            consists of sequences JAAMOR010000001-JAAMOR010000034.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 25x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013320535.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:42:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,004
            CDSs (total)                      :: 4,947
            Genes (coding)                    :: 4,882
            CDSs (with protein)               :: 4,882
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 29 of 65
            Pseudo Genes (incomplete)         :: 42 of 65
            Pseudo Genes (internal stop)      :: 10 of 65
            Pseudo Genes (multiple problems)  :: 12 of 65
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5258065
                     /organism="Agrobacterium pusense"
                     /mol_type="genomic DNA"
                     /strain="17-1009"
                     /host="Pentas"
                     /db_xref="taxon:648995"
                     /collection_date="2017"
WGS         JAAMOR010000001-JAAMOR010000034
WGS_SCAFLD  NZ_JAAMOR010000001-NZ_JAAMOR010000034
//
LOCUS       NZ_WQQO01000000      5043334 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Bacteroides uniformis strain MCC198, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WQQO00000000
VERSION     NZ_WQQO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12147352
            Assembly: GCF_018785825.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacteroides uniformis
  ORGANISM  Bacteroides uniformis
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Bacteroidaceae; Bacteroides.
REFERENCE   1  (bases 1 to 5043334)
  AUTHORS   Perez,M., Ntemiri,A., Tan,H., Harris,H.M.B., Roager,H.M.,
            Ribiere,C. and O'Toole,P.W.
  TITLE     A synthetic consortium of 100 gut commensals modulates the
            composition and function in a colon model of the microbiome of
            elderly subjects
  JOURNAL   Gut Microbes 13 (1), 1-19 (2021)
   PUBMED   33993839
REFERENCE   2  (bases 1 to 5043334)
  AUTHORS   Harris,H.M.B.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2019) Microbiology Department, University College
            Cork, Western road, Cork, Cork 0000, Ireland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WQQO00000000.1.
            The Bacteroides uniformis whole genome shotgun (WGS) project has
            the project accession NZ_WQQO00000000.  This version of the project
            (01) has the accession number NZ_WQQO01000000, and consists of
            sequences WQQO01000001-WQQO01000157.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. 1.2.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 138.871x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_018785825.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:34:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,286
            CDSs (total)                      :: 4,217
            Genes (coding)                    :: 4,085
            CDSs (with protein)               :: 4,085
            Genes (RNA)                       :: 69
            rRNAs                             :: 1, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2, 3 (16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 132
            CDSs (without protein)            :: 132
            Pseudo Genes (ambiguous residues) :: 0 of 132
            Pseudo Genes (frameshifted)       :: 36 of 132
            Pseudo Genes (incomplete)         :: 93 of 132
            Pseudo Genes (internal stop)      :: 20 of 132
            Pseudo Genes (multiple problems)  :: 16 of 132
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5043334
                     /organism="Bacteroides uniformis"
                     /mol_type="genomic DNA"
                     /strain="MCC198"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:820"
                     /geo_loc_name="Ireland"
                     /lat_lon="51.8985 N 8.4756 W"
WGS         WQQO01000001-WQQO01000157
WGS_SCAFLD  NZ_WQQO01000001-NZ_WQQO01000157
//
LOCUS       NZ_JAESVQ010000000   5403879 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Brenneria goodwinii strain Bg_FRB186_BRG_3, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAESVQ000000000
VERSION     NZ_JAESVQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17492622
            Assembly: GCF_022358645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brenneria goodwinii
  ORGANISM  Brenneria goodwinii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Pectobacteriaceae; Brenneria.
REFERENCE   1  (bases 1 to 5403879)
  AUTHORS   Brady,C., Orsi,M., Doonan,J.M., Denman,S. and Arnold,D.
  TITLE     Brenneria goodwinii growth in vitro is improved by competitive
            interactions with other bacterial species associated with Acute Oak
            Decline
  JOURNAL   Curr Res Microb Sci 3, 100102 (2021)
   PUBMED   35005660
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5403879)
  AUTHORS   Brady,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-JAN-2021) DAS, University of the West of England,
            Coldharbour Lane, Bristol, Select. BS16 1QY, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAESVQ000000000.1.
            The Brenneria goodwinii whole genome shotgun (WGS) project has the
            project accession NZ_JAESVQ000000000.  This version of the project
            (01) has the accession number NZ_JAESVQ010000000, and consists of
            sequences JAESVQ010000001-JAESVQ010000130.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: DEC-2019
            Assembly Method        :: SPAdes v. 3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_022358645.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:40:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,865
            CDSs (total)                      :: 4,735
            Genes (coding)                    :: 4,631
            CDSs (with protein)               :: 4,631
            Genes (RNA)                       :: 130
            rRNAs                             :: 9, 12, 29 (5S, 16S, 23S)
            complete rRNAs                    :: 6 (5S)
            partial rRNAs                     :: 3, 12, 29 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 104
            CDSs (without protein)            :: 104
            Pseudo Genes (ambiguous residues) :: 0 of 104
            Pseudo Genes (frameshifted)       :: 26 of 104
            Pseudo Genes (incomplete)         :: 91 of 104
            Pseudo Genes (internal stop)      :: 11 of 104
            Pseudo Genes (multiple problems)  :: 20 of 104
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5403879
                     /organism="Brenneria goodwinii"
                     /mol_type="genomic DNA"
                     /strain="Bg_FRB186_BRG_3"
                     /isolation_source="symptomatic inner bark"
                     /host="Quercus robur"
                     /db_xref="taxon:1109412"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2009"
                     /collected_by="Sandra Denman"
WGS         JAESVQ010000001-JAESVQ010000130
WGS_SCAFLD  NZ_JAESVQ010000001-NZ_JAESVQ010000130
//
LOCUS       NZ_JABNND010000000   2568669 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Bifidobacterium longum subsp. infantis strain BI-G201, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JABNND000000000
VERSION     NZ_JABNND000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14908987
            Assembly: GCF_013204895.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bifidobacterium longum subsp. infantis (Bifidobacterium infantis)
  ORGANISM  Bifidobacterium longum subsp. infantis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (bases 1 to 2568669)
  AUTHORS   Song,J., Xu,Y., Han,D., Teng,Q., Jiang,D. and Liu,Q.
  TITLE     Draft Genome Sequence of Bifidobacterium longum subsp. infantis
            BI-G201, a Commercialization Strain
  JOURNAL   Microbiol Resour Announc 9 (47), e00785-20 (2020)
   PUBMED   33214292
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2568669)
  AUTHORS   Song,J., Xu,Y., Han,D., Teng,Q., Jiang,D. and Liu,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAY-2020) Basic Research, Research and Development
            Center, Songze Road, Shanghai 201700, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JABNND000000000.1.
            The Bifidobacterium longum subsp. infantis whole genome shotgun
            (WGS) project has the project accession NZ_JABNND000000000.  This
            version of the project (01) has the accession number
            NZ_JABNND010000000, and consists of sequences
            JABNND010000001-JABNND010000067.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 576.64x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013204895.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:14:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,299
            CDSs (total)                      :: 2,233
            Genes (coding)                    :: 2,120
            CDSs (with protein)               :: 2,120
            Genes (RNA)                       :: 66
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 113
            CDSs (without protein)            :: 113
            Pseudo Genes (ambiguous residues) :: 0 of 113
            Pseudo Genes (frameshifted)       :: 44 of 113
            Pseudo Genes (incomplete)         :: 75 of 113
            Pseudo Genes (internal stop)      :: 9 of 113
            Pseudo Genes (multiple problems)  :: 15 of 113
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2568669
                     /organism="Bifidobacterium longum subsp. infantis"
                     /mol_type="genomic DNA"
                     /strain="BI-G201"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /sub_species="infantis"
                     /db_xref="taxon:1682"
                     /geo_loc_name="China: Qinghai"
                     /collection_date="2011-11"
WGS         JABNND010000001-JABNND010000067
WGS_SCAFLD  NZ_JABNND010000001-NZ_JABNND010000067
//
LOCUS       NZ_VEVR01000000      1749649 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain S871, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VEVR00000000
VERSION     NZ_VEVR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11959370
            Assembly: GCF_006349495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1749649)
  AUTHORS   Addetia,A., Greninger,A. and Fang,F.
  TITLE     Epidemiology of MDR Campylobacter spp.
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1749649)
  AUTHORS   Addetia,A., Greninger,A. and Fang,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2019) UW Virology, University of Washington, 850
            Republican St, Seattle, WA 98109, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VEVR00000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_VEVR00000000.  This version of the project
            (01) has the accession number NZ_VEVR01000000, and consists of
            sequences VEVR01000001-VEVR01000052.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 238.4x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_006349495.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:52:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,868
            CDSs (total)                      :: 1,822
            Genes (coding)                    :: 1,753
            CDSs (with protein)               :: 1,753
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 26 of 69
            Pseudo Genes (incomplete)         :: 40 of 69
            Pseudo Genes (internal stop)      :: 9 of 69
            Pseudo Genes (multiple problems)  :: 6 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1749649
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="S871"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /geo_loc_name="USA: Seattle, WA"
                     /collection_date="2018"
                     /collected_by="University of Washington"
WGS         VEVR01000001-VEVR01000052
WGS_SCAFLD  NZ_VEVR01000001-NZ_VEVR01000052
//
LOCUS       NZ_VEWI01000000      1771812 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain 42478, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VEWI00000000
VERSION     NZ_VEWI00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11959353
            Assembly: GCF_006349525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1771812)
  AUTHORS   Addetia,A., Greninger,A. and Fang,F.
  TITLE     Epidemiology of MDR Campylobacter spp.
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1771812)
  AUTHORS   Addetia,A., Greninger,A. and Fang,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2019) UW Virology, University of Washington, 850
            Republican St, Seattle, WA 98109, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VEWI00000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_VEWI00000000.  This version of the project
            (01) has the accession number NZ_VEWI01000000, and consists of
            sequences VEWI01000001-VEWI01000081.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 61x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_006349525.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:47:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,883
            CDSs (total)                      :: 1,835
            Genes (coding)                    :: 1,741
            CDSs (with protein)               :: 1,741
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 94
            CDSs (without protein)            :: 94
            Pseudo Genes (ambiguous residues) :: 0 of 94
            Pseudo Genes (frameshifted)       :: 31 of 94
            Pseudo Genes (incomplete)         :: 60 of 94
            Pseudo Genes (internal stop)      :: 6 of 94
            Pseudo Genes (multiple problems)  :: 3 of 94
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1771812
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="42478"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /geo_loc_name="Canada: Montreal, Quebec"
                     /collection_date="2017"
WGS         VEWI01000001-VEWI01000081
WGS_SCAFLD  NZ_VEWI01000001-NZ_VEWI01000081
//
LOCUS       NZ_VADM01000000      1684007 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain MON383, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VADM00000000
VERSION     NZ_VADM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11605044
            Assembly: GCF_007670855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1684007)
  AUTHORS   Ze,M., Boukerb,A.M., Henry,R., Deletic,A. and Mccarthy,D.T.
  TITLE     Understanding the sources and risks of Campylobacter to storm water
            constructed wetlands
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1684007)
  AUTHORS   Ze,M., Boukerb,A.M., Henry,R., Deletic,A. and Mccarthy,D.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) Environmental and Public Health
            Microbiology Laboratory, Monash University, Alliance Ln, Clayton
            VIC 3800, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VADM00000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_VADM00000000.  This version of the project
            (01) has the accession number NZ_VADM01000000, and consists of
            sequences VADM01000001-VADM01000055.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. 1.2.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50-100x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007670855.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:00:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,786
            CDSs (total)                      :: 1,737
            Genes (coding)                    :: 1,678
            CDSs (with protein)               :: 1,678
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 33 of 59
            Pseudo Genes (incomplete)         :: 26 of 59
            Pseudo Genes (internal stop)      :: 8 of 59
            Pseudo Genes (multiple problems)  :: 8 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1684007
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="MON383"
                     /isolation_source="Casey Hospital"
                     /db_xref="taxon:195"
                     /geo_loc_name="Australia"
                     /collection_date="2015-07-13"
                     /collected_by="EPHM Lab"
WGS         VADM01000001-VADM01000055
WGS_SCAFLD  NZ_VADM01000001-NZ_VADM01000055
//
LOCUS       NZ_JBVTUT010000000   5455674 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Bacillus anthracis strain fddn_aq6, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBVTUT000000000
VERSION     NZ_JBVTUT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56335370
            Assembly: GCF_055790645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus anthracis (anthrax bacterium)
  ORGANISM  Bacillus anthracis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (bases 1 to 5455674)
  AUTHORS   Samia,T.A., Fakruddin,M., Muhammad Faisal,S.S., Ibrahim,M.,
            Maria,K.B. and Biswas,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-MAR-2026) Department of Biochemistry & Microbiology
            (BMD), North South University, Block:B, Dhaka 1229, Bangladesh
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBVTUT000000000.1.
            The Bacillus anthracis whole genome shotgun (WGS) project has the
            project accession NZ_JBVTUT000000000.  This version of the project
            (01) has the accession number NZ_JBVTUT010000000, and consists of
            sequences JBVTUT010000001-JBVTUT010000094.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 68.18x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_055790645.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:51:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,694
            CDSs (total)                      :: 5,610
            Genes (coding)                    :: 5,438
            CDSs (with protein)               :: 5,438
            Genes (RNA)                       :: 84
            rRNAs                             :: 5, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 4, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 172
            CDSs (without protein)            :: 172
            Pseudo Genes (ambiguous residues) :: 0 of 172
            Pseudo Genes (frameshifted)       :: 62 of 172
            Pseudo Genes (incomplete)         :: 126 of 172
            Pseudo Genes (internal stop)      :: 33 of 172
            Pseudo Genes (multiple problems)  :: 37 of 172
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5455674
                     /organism="Bacillus anthracis"
                     /mol_type="genomic DNA"
                     /strain="fddn_aq6"
                     /isolation_source="Environmental water"
                     /db_xref="taxon:1392"
                     /geo_loc_name="Bangladesh: Dhaka"
                     /collection_date="2023-09-02"
WGS         JBVTUT010000001-JBVTUT010000094
WGS_SCAFLD  NZ_JBVTUT010000001-NZ_JBVTUT010000094
//
LOCUS       NZ_JAACZZ010000000   4292816 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Bacillus licheniformis strain SMIA-2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAACZZ000000000
VERSION     NZ_JAACZZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13909444
            Assembly: GCF_009965255.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus licheniformis
  ORGANISM  Bacillus licheniformis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (bases 1 to 4292816)
  AUTHORS   Bernardo,S.P.C., Rosana,A.R.R., Souza,A.N.D., Chiorean,S.,
            Vederas,J.C. and Martins,M.L.L.
  TITLE     Draft genome sequence of the thermophilic bacterium Bacillus
            licheniformis SMIA-2, an antimicrobial- and thermostable
            enzyme-producing isolate from Rio de Janeiro, Brazil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4292816)
  AUTHORS   Bernardo,S.P.C., Rosana,A.R.R., Souza,A.N.D., Chiorean,S.,
            Vederas,J.C. and Martins,M.L.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2020) Department of Chemistry, University of
            Alberta, 11227 Saskatchewan Drive, Edmonton, Alberta T6G2G2, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAACZZ000000000.1.
            The Bacillus licheniformis whole genome shotgun (WGS) project has
            the project accession NZ_JAACZZ000000000.  This version of the
            project (01) has the accession number NZ_JAACZZ010000000, and
            consists of sequences JAACZZ010000001-JAACZZ010000034.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Dr. Meire Lelis Leal
            Martins, Universidade Estadual do Norte Fluminense, Rio de Janiero,
            Brazil.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 01-JAN-2020
            Assembly Method        :: IDBA-UD_denovo Assembler v. JAN-2020
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 233.0x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009965255.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:04:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,557
            CDSs (total)                      :: 4,462
            Genes (coding)                    :: 4,359
            CDSs (with protein)               :: 4,359
            Genes (RNA)                       :: 95
            rRNAs                             :: 6, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 5, 3, 1 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 103
            CDSs (without protein)            :: 103
            Pseudo Genes (ambiguous residues) :: 0 of 103
            Pseudo Genes (frameshifted)       :: 57 of 103
            Pseudo Genes (incomplete)         :: 49 of 103
            Pseudo Genes (internal stop)      :: 8 of 103
            Pseudo Genes (multiple problems)  :: 11 of 103
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4292816
                     /organism="Bacillus licheniformis"
                     /mol_type="genomic DNA"
                     /strain="SMIA-2"
                     /isolation_source="soil"
                     /db_xref="taxon:1402"
                     /geo_loc_name="Brazil: Rio de Janiero"
                     /lat_lon="21.75 S 41.32 W"
                     /collection_date="2000-12-04"
WGS         JAACZZ010000001-JAACZZ010000034
WGS_SCAFLD  NZ_JAACZZ010000001-NZ_JAACZZ010000034
//
LOCUS       NZ_VEKQ01000000      4181263 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Bacillus altitudinis strain DE0291, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VEKQ00000000
VERSION     NZ_VEKQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11792451
            Assembly: GCF_007681245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus altitudinis
  ORGANISM  Bacillus altitudinis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (bases 1 to 4181263)
  AUTHORS   Zhang,C.
  TITLE     Temporal encoding of bacterial identity and traits in growth
            dynamics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4181263)
  AUTHORS   Song,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-MAY-2019) BGI-CNGB, BGI, No. 11, Beishan IZ., Yantian
            Dist., Shenzhen, Guangdong 518083, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VEKQ00000000.1.
            The Bacillus altitudinis whole genome shotgun (WGS) project has the
            project accession NZ_VEKQ00000000.  This version of the project
            (01) has the accession number NZ_VEKQ01000000, and consists of
            sequences VEKQ01000001-VEKQ01001761.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGISEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007681245.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:23:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,409
            CDSs (total)                      :: 4,355
            Genes (coding)                    :: 4,121
            CDSs (with protein)               :: 4,121
            Genes (RNA)                       :: 54
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 44
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 234
            CDSs (without protein)            :: 234
            Pseudo Genes (ambiguous residues) :: 0 of 234
            Pseudo Genes (frameshifted)       :: 9 of 234
            Pseudo Genes (incomplete)         :: 222 of 234
            Pseudo Genes (internal stop)      :: 16 of 234
            Pseudo Genes (multiple problems)  :: 13 of 234
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4181263
                     /organism="Bacillus altitudinis"
                     /mol_type="genomic DNA"
                     /strain="DE0291"
                     /isolation_source="environmental"
                     /db_xref="taxon:293387"
                     /geo_loc_name="USA: North Carolina, Durham"
                     /collection_date="2018-09-01"
WGS         VEKQ01000001-VEKQ01001761
WGS_SCAFLD  NZ_VEKQ01000001-NZ_VEKQ01001761
//
LOCUS       NZ_JBMBRH010000000   4743323 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Bacillus licheniformis strain SKAM1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBMBRH000000000
VERSION     NZ_JBMBRH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47310464
            Assembly: GCF_048799685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus licheniformis
  ORGANISM  Bacillus licheniformis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (bases 1 to 4743323)
  AUTHORS   Khan,S. and Mathur,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2025) Department of Biotechnology, Jaypee
            Institute of Information Technology, A 10, Sector 62, Noida, Uttar
            Pradesh 201309, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBMBRH000000000.1.
            The Bacillus licheniformis whole genome shotgun (WGS) project has
            the project accession NZ_JBMBRH000000000.  This version of the
            project (01) has the accession number NZ_JBMBRH010000000, and
            consists of sequences JBMBRH010000001-JBMBRH010000669.
            Bacteria and source DNA available from Department of Biotechnology,
            Jaypee Institute of Information Technology.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 166.04x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_048799685.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 14:09:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,449
            CDSs (total)                      :: 5,362
            Genes (coding)                    :: 5,113
            CDSs (with protein)               :: 5,113
            Genes (RNA)                       :: 87
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 79
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 249
            CDSs (without protein)            :: 249
            Pseudo Genes (ambiguous residues) :: 0 of 249
            Pseudo Genes (frameshifted)       :: 64 of 249
            Pseudo Genes (incomplete)         :: 186 of 249
            Pseudo Genes (internal stop)      :: 16 of 249
            Pseudo Genes (multiple problems)  :: 17 of 249
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4743323
                     /organism="Bacillus licheniformis"
                     /mol_type="genomic DNA"
                     /strain="SKAM1"
                     /isolation_source="medicinal Plant"
                     /host="Humulus lupulus"
                     /db_xref="taxon:1402"
                     /geo_loc_name="India"
                     /collection_date="2023-01-31"
WGS         JBMBRH010000001-JBMBRH010000669
WGS_SCAFLD  NZ_JBMBRH010000001-NZ_JBMBRH010000669
//
LOCUS       NZ_JBWBWL010000000   9192911 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Bradyrhizobium sp. WYCCWR15519, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWBWL000000000
VERSION     NZ_JBWBWL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56463752
            Assembly: GCF_056174645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bradyrhizobium sp. WYCCWR15519
  ORGANISM  Bradyrhizobium sp. WYCCWR15519
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (bases 1 to 9192911)
  AUTHORS   Zhang,J.
  TITLE     Genome public
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 9192911)
  AUTHORS   Zhang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2026) National Microbiology Data Center,
            Institute of Microbiology, Chinese Academy of Sciences, No. 1
            Beichen West Road, Chaoyang District, Beijing 100101, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBWL000000000.1.
            The Bradyrhizobium sp. WYCCWR15519 whole genome shotgun (WGS)
            project has the project accession NZ_JBWBWL000000000.  This version
            of the project (01) has the accession number NZ_JBWBWL010000000,
            and consists of sequences JBWBWL010000001-JBWBWL010000192.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 24-FEB-2026
            Assembly Method        :: SPAdes v. v3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 79.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056174645.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 18:22:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 9,040
            CDSs (total)                      :: 8,937
            Genes (coding)                    :: 8,614
            CDSs (with protein)               :: 8,614
            Genes (RNA)                       :: 103
            rRNAs                             :: 1, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 2, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 91
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 323
            CDSs (without protein)            :: 323
            Pseudo Genes (ambiguous residues) :: 0 of 323
            Pseudo Genes (frameshifted)       :: 160 of 323
            Pseudo Genes (incomplete)         :: 229 of 323
            Pseudo Genes (internal stop)      :: 35 of 323
            Pseudo Genes (multiple problems)  :: 87 of 323
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9192911
                     /organism="Bradyrhizobium sp. WYCCWR15519"
                     /mol_type="genomic DNA"
                     /strain="WYCCWR15519"
                     /isolation_source="Peanut root nodules"
                     /db_xref="taxon:3694269"
                     /geo_loc_name="China: Xuchang"
                     /collection_date="2024-06"
WGS         JBWBWL010000001-JBWBWL010000192
WGS_SCAFLD  NZ_JBWBWL010000001-NZ_JBWBWL010000192
//
LOCUS       NZ_VEAE01000000      5571648 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Bacillus mycoides strain DE0340, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VEAE00000000
VERSION     NZ_VEAE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11792500
            Assembly: GCF_007673715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus mycoides (Bacillus weihenstephanensis)
  ORGANISM  Bacillus mycoides
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus; Bacillus cereus group.
REFERENCE   1  (bases 1 to 5571648)
  AUTHORS   Zhang,C.
  TITLE     Temporal encoding of bacterial identity and traits in growth
            dynamics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5571648)
  AUTHORS   Song,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-MAY-2019) BGI-CNGB, BGI, No. 11, Beishan IZ., Yantian
            Dist., Shenzhen, Guangdong 518083, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VEAE00000000.1.
            The Bacillus mycoides whole genome shotgun (WGS) project has the
            project accession NZ_VEAE00000000.  This version of the project
            (01) has the accession number NZ_VEAE01000000, and consists of
            sequences VEAE01000001-VEAE01000131.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGISEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007673715.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:33:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,787
            CDSs (total)                      :: 5,735
            Genes (coding)                    :: 5,484
            CDSs (with protein)               :: 5,484
            Genes (RNA)                       :: 52
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 3 (5S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 251
            CDSs (without protein)            :: 251
            Pseudo Genes (ambiguous residues) :: 0 of 251
            Pseudo Genes (frameshifted)       :: 82 of 251
            Pseudo Genes (incomplete)         :: 175 of 251
            Pseudo Genes (internal stop)      :: 56 of 251
            Pseudo Genes (multiple problems)  :: 55 of 251
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5571648
                     /organism="Bacillus mycoides"
                     /mol_type="genomic DNA"
                     /strain="DE0340"
                     /isolation_source="environmental"
                     /db_xref="taxon:1405"
                     /geo_loc_name="USA: North Carolina, Durham"
                     /collection_date="2018-09-01"
WGS         VEAE01000001-VEAE01000131
WGS_SCAFLD  NZ_VEAE01000001-NZ_VEAE01000131
//
LOCUS       NZ_VEKT01000000      4226346 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Bacillus altitudinis strain DE0284, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VEKT00000000
VERSION     NZ_VEKT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11792444
            Assembly: GCF_007681345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus altitudinis
  ORGANISM  Bacillus altitudinis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (bases 1 to 4226346)
  AUTHORS   Zhang,C.
  TITLE     Temporal encoding of bacterial identity and traits in growth
            dynamics
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4226346)
  AUTHORS   Song,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-MAY-2019) BGI-CNGB, BGI, No. 11, Beishan IZ., Yantian
            Dist., Shenzhen, Guangdong 518083, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VEKT00000000.1.
            The Bacillus altitudinis whole genome shotgun (WGS) project has the
            project accession NZ_VEKT00000000.  This version of the project
            (01) has the accession number NZ_VEKT01000000, and consists of
            sequences VEKT01000001-VEKT01001849.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: BGISEQ
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007681345.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:27:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,460
            CDSs (total)                      :: 4,393
            Genes (coding)                    :: 4,137
            CDSs (with protein)               :: 4,137
            Genes (RNA)                       :: 67
            rRNAs                             :: 2, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3, 2 (5S, 16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 256
            CDSs (without protein)            :: 256
            Pseudo Genes (ambiguous residues) :: 0 of 256
            Pseudo Genes (frameshifted)       :: 14 of 256
            Pseudo Genes (incomplete)         :: 236 of 256
            Pseudo Genes (internal stop)      :: 23 of 256
            Pseudo Genes (multiple problems)  :: 16 of 256
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4226346
                     /organism="Bacillus altitudinis"
                     /mol_type="genomic DNA"
                     /strain="DE0284"
                     /isolation_source="environmental"
                     /db_xref="taxon:293387"
                     /geo_loc_name="USA: North Carolina, Durham"
                     /collection_date="2018-09-01"
WGS         VEKT01000001-VEKT01001849
WGS_SCAFLD  NZ_VEKT01000001-NZ_VEKT01001849
//
LOCUS       NZ_WPIC01000000      5956108 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain CG49, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WPIC00000000
VERSION     NZ_WPIC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13451320
            Assembly: GCF_009744315.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5956108)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Whole-genome sequencing of Allorhizobium vitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5956108)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2019) School of Life and Environmental Sciences,
            Deakin University, 75 Pidgons Road, Waurn Ponds, Victoria 3216,
            Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WPIC00000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_WPIC00000000.  This version of the project
            (01) has the accession number NZ_WPIC01000000, and consists of
            sequences WPIC01000001-WPIC01000043.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 38x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009744315.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:58:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,489
            CDSs (total)                      :: 5,434
            Genes (coding)                    :: 5,304
            CDSs (with protein)               :: 5,304
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 130
            CDSs (without protein)            :: 130
            Pseudo Genes (ambiguous residues) :: 0 of 130
            Pseudo Genes (frameshifted)       :: 46 of 130
            Pseudo Genes (incomplete)         :: 97 of 130
            Pseudo Genes (internal stop)      :: 22 of 130
            Pseudo Genes (multiple problems)  :: 32 of 130
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5956108
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="CG49"
                     /isolation_source="Grape Gall"
                     /host="Vitis vinifera"
                     /db_xref="taxon:373"
                     /geo_loc_name="USA: Michigan"
                     /collected_by="Tom Burr"
WGS         WPIC01000001-WPIC01000043
WGS_SCAFLD  NZ_WPIC01000001-NZ_WPIC01000043
//
LOCUS       NZ_JBWBUZ010000000   3896003 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Brevibacterium sp. Z349TD_9, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWBUZ000000000
VERSION     NZ_JBWBUZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449752
            Assembly: GCF_056173565.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brevibacterium sp. Z349TD_9
  ORGANISM  Brevibacterium sp. Z349TD_9
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Brevibacteriaceae; Brevibacterium.
REFERENCE   1  (bases 1 to 3896003)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3896003)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBUZ000000000.1.
            The Brevibacterium sp. Z349TD_9 whole genome shotgun (WGS) project
            has the project accession NZ_JBWBUZ000000000.  This version of the
            project (01) has the accession number NZ_JBWBUZ010000000, and
            consists of sequence JBWBUZ010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 387.1x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173565.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:41:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,583
            CDSs (total)                      :: 3,525
            Genes (coding)                    :: 3,495
            CDSs (with protein)               :: 3,495
            Genes (RNA)                       :: 58
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 30
            CDSs (without protein)            :: 30
            Pseudo Genes (ambiguous residues) :: 0 of 30
            Pseudo Genes (frameshifted)       :: 7 of 30
            Pseudo Genes (incomplete)         :: 21 of 30
            Pseudo Genes (internal stop)      :: 3 of 30
            Pseudo Genes (multiple problems)  :: 1 of 30
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3896003
                     /organism="Brevibacterium sp. Z349TD_9"
                     /mol_type="genomic DNA"
                     /strain="Z349TD_9"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569812"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBUZ010000001
WGS_SCAFLD  NZ_CM149680
//
LOCUS       NZ_JACXXE010000000   3697866 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Bacillus crepusculi strain 28A-2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JACXXE000000000
VERSION     NZ_JACXXE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN16193117
            Assembly: GCF_014764715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus crepusculi
  ORGANISM  Bacillus crepusculi
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (bases 1 to 3697866)
  AUTHORS   Williams,S.E., Stennett,H.L., Devine,A.J., Song,Z., Back,C.R.,
            Wang,L., Mantell,J., Neal,C., Jepson,M.A., Essex-Lopresti,A.E.,
            Sellars,J.D., Stach,J.E.M., Willis,C.L., Curnow,P. and Race,P.R.
  TITLE     OSMAC guided bioprospecting of Atlantic sponges reveals novel
            bacterial species and evidence for the antimicrobial thiazole
            alkaloid agrochelin II
  JOURNAL   Appl Environ Microbiol 92 (3), e0187725 (2026)
   PUBMED   41700857
REFERENCE   2  (bases 1 to 3697866)
  AUTHORS   Stennett,H.L. and Williams,S.E.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-SEP-2020) Biochemistry, University of Bristol,
            Department of Biochemistry, Biomedical Sciences Building,
            University Walk, Bristol BS8 1TD, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JACXXE000000000.1.
            The Bacillus crepusculi whole genome shotgun (WGS) project has the
            project accession NZ_JACXXE000000000.  This version of the project
            (01) has the accession number NZ_JACXXE010000000, and consists of
            sequences JACXXE010000001-JACXXE010000040.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Paul Race, University of
            Bristol, BS8 1TD.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: JUN-2020
            Assembly Method        :: Unicycler v. 0.4.6
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1145.0x
            Sequencing Technology  :: Illumina MiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_014764715.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:32:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,885
            CDSs (total)                      :: 3,807
            Genes (coding)                    :: 3,757
            CDSs (with protein)               :: 3,757
            Genes (RNA)                       :: 78
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 19 of 50
            Pseudo Genes (incomplete)         :: 31 of 50
            Pseudo Genes (internal stop)      :: 9 of 50
            Pseudo Genes (multiple problems)  :: 8 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3697866
                     /organism="Bacillus crepusculi"
                     /mol_type="genomic DNA"
                     /strain="28A-2"
                     /isolation_source="hexactinellid isolated at 868 m depth"
                     /host="sponge"
                     /type_material="type strain of Bacillus crepusculi"
                     /db_xref="taxon:2772252"
                     /geo_loc_name="Atlantic Ocean"
                     /lat_lon="14.88 N 48.12 W"
                     /collection_date="2015"
WGS         JACXXE010000001-JACXXE010000040
WGS_SCAFLD  NZ_JACXXE010000001-NZ_JACXXE010000040
//
LOCUS       NZ_JAOVXX010000000   3032201 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Brachyspira hyodysenteriae strain Bhyo_232, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAOVXX000000000
VERSION     NZ_JAOVXX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN31207172
            Assembly: GCF_027586515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Brachyspira hyodysenteriae
  ORGANISM  Brachyspira hyodysenteriae
            Bacteria; Pseudomonadati; Spirochaetota; Spirochaetia;
            Brachyspirales; Brachyspiraceae; Brachyspira.
REFERENCE   1  (bases 1 to 3032201)
  AUTHORS   Vereecke,N., Botteldoorn,N., Brosse,C., Bonckaert,C., Nauwynck,H.,
            Haesebrouck,F., Boyen,F., Maes,D. and Theuns,S.
  TITLE     Predictive Power of Long-Read Whole-Genome Sequencing for Rapid
            Diagnostics of Multidrug-Resistant Brachyspira hyodysenteriae
            Strains
  JOURNAL   Microbiol Spectr 11 (1), e0412322 (2023)
   PUBMED   36602320
REFERENCE   2  (bases 1 to 3032201)
  AUTHORS   Vereecke,N., Botteldoorn,N., Brosse,C., Bonckaert,C., Nauwynck,H.,
            Haesebrouck,F., Boyen,F., Maes,D. and Theuns,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-OCT-2022) Department of Pathobiology, Pharmacology
            and Zoological Medicine, Universiteit Gent, Salisburylaan 133,
            Merelbeke 9820, Belgium
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAOVXX000000000.1.
            The Brachyspira hyodysenteriae whole genome shotgun (WGS) project
            has the project accession NZ_JAOVXX000000000.  This version of the
            project (01) has the accession number NZ_JAOVXX010000000, and
            consists of sequences JAOVXX010000001-JAOVXX010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Canu v. 2.0; minimap2 v. 2.24; medaka v.
                                      1.6.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 176x
            Sequencing Technology  :: GridION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_027586515.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:30:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,726
            CDSs (total)                      :: 2,686
            Genes (coding)                    :: 2,595
            CDSs (with protein)               :: 2,595
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 91
            CDSs (without protein)            :: 91
            Pseudo Genes (ambiguous residues) :: 0 of 91
            Pseudo Genes (frameshifted)       :: 82 of 91
            Pseudo Genes (incomplete)         :: 12 of 91
            Pseudo Genes (internal stop)      :: 2 of 91
            Pseudo Genes (multiple problems)  :: 5 of 91
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3032201
                     /organism="Brachyspira hyodysenteriae"
                     /mol_type="genomic DNA"
                     /strain="Bhyo_232"
                     /host="pig"
                     /db_xref="taxon:159"
                     /geo_loc_name="Belgium"
                     /collection_date="2019-03-16"
WGS         JAOVXX010000001-JAOVXX010000002
WGS_SCAFLD  NZ_JAOVXX010000001-NZ_JAOVXX010000002
//
LOCUS       NZ_QUSG01000000      5951489 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain ICMP 10754, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QUSG00000000
VERSION     NZ_QUSG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09762210
            Assembly: GCF_008502005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5951489)
  AUTHORS   Visnovsky,S.B. and Pitman,A.R.
  TITLE     Genome sequencing of Agrobacterium vitis strain ICMP 10754
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5951489)
  AUTHORS   Visnovsky,S.B. and Pitman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-AUG-2018) Microbial Systems for Plant Protection, The
            New Zealand Institute for Plant and Food Research Ltd, Plant and
            Food Research Ltd, Private Bag 4704, Christchurch, Canterbury 8140,
            New Zealand
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QUSG00000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_QUSG00000000.  This version of the project
            (01) has the accession number NZ_QUSG01000000, and consists of
            sequences QUSG01000001-QUSG01000072.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 20.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_008502005.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:42:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,424
            CDSs (total)                      :: 5,370
            Genes (coding)                    :: 5,265
            CDSs (with protein)               :: 5,265
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 42 of 105
            Pseudo Genes (incomplete)         :: 78 of 105
            Pseudo Genes (internal stop)      :: 14 of 105
            Pseudo Genes (multiple problems)  :: 27 of 105
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5951489
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="ICMP 10754"
                     /host="grape"
                     /db_xref="taxon:373"
                     /geo_loc_name="Australia"
                     /collection_date="1987"
WGS         QUSG01000001-QUSG01000072
WGS_SCAFLD  NZ_QUSG01000001-NZ_QUSG01000072
//
LOCUS       NZ_WPHV01000000      5839207 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain CG118, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WPHV00000000
VERSION     NZ_WPHV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13451327
            Assembly: GCF_009744235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5839207)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Whole-genome sequencing of Allorhizobium vitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5839207)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2019) School of Life and Environmental Sciences,
            Deakin University, 75 Pidgons Road, Waurn Ponds, Victoria 3216,
            Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WPHV00000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_WPHV00000000.  This version of the project
            (01) has the accession number NZ_WPHV01000000, and consists of
            sequences WPHV01000001-WPHV01000048.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 87x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009744235.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:53:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,287
            CDSs (total)                      :: 5,233
            Genes (coding)                    :: 5,124
            CDSs (with protein)               :: 5,124
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 31 of 109
            Pseudo Genes (incomplete)         :: 83 of 109
            Pseudo Genes (internal stop)      :: 21 of 109
            Pseudo Genes (multiple problems)  :: 21 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5839207
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="CG118"
                     /isolation_source="Vineyard soil"
                     /db_xref="taxon:373"
                     /geo_loc_name="USA: New York"
                     /collected_by="Tom Burr"
WGS         WPHV01000001-WPHV01000048
WGS_SCAFLD  NZ_WPHV01000001-NZ_WPHV01000048
//
LOCUS       NZ_JAALYA010000000   5950531 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain P86/93, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAALYA000000000
VERSION     NZ_JAALYA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14165436
            Assembly: GCF_013317325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5950531)
  AUTHORS   Weisberg,A.J., Davis,E.W. 2nd, Tabima,J., Belcher,M.S., Miller,M.,
            Kuo,C.H., Loper,J.E., Grunwald,N.J., Putnam,M.L. and Chang,J.H.
  TITLE     Unexpected conservation and global transmission of agrobacterial
            virulence plasmids
  JOURNAL   Science 368 (6495) (2020)
   PUBMED   32499412
REFERENCE   2  (bases 1 to 5950531)
  AUTHORS   Weisberg,A.J., Davis,E.W. II, Tabima,J.R., Belcher,M.S., Miller,M.,
            Kuo,C.-H., Loper,J.E., Grunwald,N.J., Putnam,M.L. and Chang,J.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-FEB-2020) Botany and Plant Pathology, Oregon State
            University, 2082 Cordley Hall, Oregon State University, Corvallis,
            OR 97330, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAALYA000000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_JAALYA000000000.  This version of the project
            (01) has the accession number NZ_JAALYA010000000, and consists of
            sequences JAALYA010000001-JAALYA010000036.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 80x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013317325.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:47:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,487
            CDSs (total)                      :: 5,430
            Genes (coding)                    :: 5,308
            CDSs (with protein)               :: 5,308
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 122
            CDSs (without protein)            :: 122
            Pseudo Genes (ambiguous residues) :: 0 of 122
            Pseudo Genes (frameshifted)       :: 49 of 122
            Pseudo Genes (incomplete)         :: 90 of 122
            Pseudo Genes (internal stop)      :: 19 of 122
            Pseudo Genes (multiple problems)  :: 33 of 122
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5950531
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="P86/93"
                     /host="Grape"
                     /db_xref="taxon:373"
                     /collection_date="1993"
WGS         JAALYA010000001-JAALYA010000036
WGS_SCAFLD  NZ_JAALYA010000001-NZ_JAALYA010000036
//
LOCUS       NZ_DATGFH010000000   6875659 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Bradyrhizobium sp. isolate SMAG_U9723, whole genome shotgun
            sequencing project.
ACCESSION   NZ_DATGFH000000000
VERSION     NZ_DATGFH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37965292
            Sequence Read Archive: SRR5579859
            Assembly: GCF_035309285.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq; TPA:assembly.
SOURCE      Bradyrhizobium sp. (soil metagenome)
  ORGANISM  Bradyrhizobium sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (bases 1 to 6875659)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. doi:
            10.1038/s41467-023-44072-7. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6875659)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            DATGFH000000000.1.
            The Bradyrhizobium sp. whole genome shotgun (WGS) project has the
            project accession NZ_DATGFH000000000.  This version of the project
            (01) has the accession number NZ_DATGFH010000000, and consists of
            sequences DATGFH010000001-DATGFH010000179.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_035309285.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:18:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,605
            CDSs (total)                      :: 6,555
            Genes (coding)                    :: 6,411
            CDSs (with protein)               :: 6,411
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 144
            CDSs (without protein)            :: 144
            Pseudo Genes (ambiguous residues) :: 0 of 144
            Pseudo Genes (frameshifted)       :: 42 of 144
            Pseudo Genes (incomplete)         :: 110 of 144
            Pseudo Genes (internal stop)      :: 8 of 144
            Pseudo Genes (multiple problems)  :: 16 of 144
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6875659
                     /organism="Bradyrhizobium sp."
                     /mol_type="genomic DNA"
                     /isolate="SMAG_U9723"
                     /isolation_source="soil"
                     /db_xref="taxon:376"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="40.7999 N 76.3402 W"
                     /metagenome_source="soil metagenome"
                     /metagenomic
WGS         DATGFH010000001-DATGFH010000179
WGS_SCAFLD  NZ_DATGFH010000001-NZ_DATGFH010000179
//
LOCUS       NZ_MBFC02000000      6244209 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain SF93, whole genome shotgun sequencing
            project.
ACCESSION   NZ_MBFC00000000
VERSION     NZ_MBFC00000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05369608
            Assembly: GCF_001860135.2
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 6244209)
  AUTHORS   Gan,H.M. and Savka,M.A.
  TITLE     Whole-genome sequencing of Allorhizobium vitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6244209)
  AUTHORS   Gan,H.M. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-NOV-2019) School of Life and Environmental Sciences,
            Deakin University, 75 Pidgons Road, Waurn Ponds, Victoria 3216,
            Australia
REFERENCE   3  (bases 1 to 6244209)
  AUTHORS   Lin,T.N., Gan,H.M. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-JUL-2016) School of Science, Monash University
            Malaysia, Jalan Lagoon Selatan, Bandar Sunway, Selangor 47500,
            Malaysia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MBFC00000000.2.
            
            On Dec 14, 2019 this sequence version replaced NZ_MBFC00000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_MBFC00000000.  This version of the project
            (02) has the accession number NZ_MBFC02000000, and consists of
            sequences MBFC02000001-MBFC02000084.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Professor Michael A. Savka,
            Rochester Institute of Technology.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. v3.13.0
            Assembly Name          :: SF93_v2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 88.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001860135.2-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:54:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,790
            CDSs (total)                      :: 5,734
            Genes (coding)                    :: 5,573
            CDSs (with protein)               :: 5,573
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 161
            CDSs (without protein)            :: 161
            Pseudo Genes (ambiguous residues) :: 0 of 161
            Pseudo Genes (frameshifted)       :: 55 of 161
            Pseudo Genes (incomplete)         :: 125 of 161
            Pseudo Genes (internal stop)      :: 18 of 161
            Pseudo Genes (multiple problems)  :: 33 of 161
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6244209
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="SF93"
                     /isolation_source="Crown gall tumor"
                     /host="Vitis vinifera"
                     /db_xref="taxon:373"
                     /geo_loc_name="Hungary"
                     /collection_date="1993"
WGS         MBFC02000001-MBFC02000084
WGS_SCAFLD  NZ_MBFC02000001-NZ_MBFC02000084
//
LOCUS       NZ_JBWBVB010000000   3740593 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Bacillus sp. iso_77, whole genome shotgun sequencing project.
ACCESSION   NZ_JBWBVB000000000
VERSION     NZ_JBWBVB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449750
            Assembly: GCF_056173625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bacillus sp. iso_77
  ORGANISM  Bacillus sp. iso_77
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Bacillus.
REFERENCE   1  (bases 1 to 3740593)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3740593)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBVB000000000.1.
            The Bacillus sp. iso_77 whole genome shotgun (WGS) project has the
            project accession NZ_JBWBVB000000000.  This version of the project
            (01) has the accession number NZ_JBWBVB010000000, and consists of
            sequence JBWBVB010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 77.8x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173625.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:50:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,837
            CDSs (total)                      :: 3,727
            Genes (coding)                    :: 3,660
            CDSs (with protein)               :: 3,660
            Genes (RNA)                       :: 110
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 50 of 67
            Pseudo Genes (incomplete)         :: 21 of 67
            Pseudo Genes (internal stop)      :: 6 of 67
            Pseudo Genes (multiple problems)  :: 8 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3740593
                     /organism="Bacillus sp. iso_77"
                     /mol_type="genomic DNA"
                     /strain="iso_77"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569810"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBVB010000001
WGS_SCAFLD  NZ_CM149683
//
LOCUS       NZ_JAALYD010000000   5962584 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain CG678, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAALYD000000000
VERSION     NZ_JAALYD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14165505
            Assembly: GCF_013317445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5962584)
  AUTHORS   Weisberg,A.J., Davis,E.W. 2nd, Tabima,J., Belcher,M.S., Miller,M.,
            Kuo,C.H., Loper,J.E., Grunwald,N.J., Putnam,M.L. and Chang,J.H.
  TITLE     Unexpected conservation and global transmission of agrobacterial
            virulence plasmids
  JOURNAL   Science 368 (6495) (2020)
   PUBMED   32499412
REFERENCE   2  (bases 1 to 5962584)
  AUTHORS   Weisberg,A.J., Davis,E.W. II, Tabima,J.R., Belcher,M.S., Miller,M.,
            Kuo,C.-H., Loper,J.E., Grunwald,N.J., Putnam,M.L. and Chang,J.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-FEB-2020) Botany and Plant Pathology, Oregon State
            University, 2082 Cordley Hall, Oregon State University, Corvallis,
            OR 97330, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAALYD000000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_JAALYD000000000.  This version of the project
            (01) has the accession number NZ_JAALYD010000000, and consists of
            sequences JAALYD010000001-JAALYD010000068.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 199x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013317445.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:51:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,415
            CDSs (total)                      :: 5,363
            Genes (coding)                    :: 5,231
            CDSs (with protein)               :: 5,231
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 132
            CDSs (without protein)            :: 132
            Pseudo Genes (ambiguous residues) :: 0 of 132
            Pseudo Genes (frameshifted)       :: 46 of 132
            Pseudo Genes (incomplete)         :: 104 of 132
            Pseudo Genes (internal stop)      :: 15 of 132
            Pseudo Genes (multiple problems)  :: 29 of 132
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5962584
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="CG678"
                     /host="Grape"
                     /db_xref="taxon:373"
WGS         JAALYD010000001-JAALYD010000068
WGS_SCAFLD  NZ_JAALYD010000001-NZ_JAALYD010000068
//
LOCUS       NZ_JBWBWM010000000   8814691 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Bradyrhizobium sp. WYCCWR15520, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWBWM000000000
VERSION     NZ_JBWBWM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56463754
            Assembly: GCF_056174665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bradyrhizobium sp. WYCCWR15520
  ORGANISM  Bradyrhizobium sp. WYCCWR15520
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Nitrobacteraceae; Bradyrhizobium.
REFERENCE   1  (bases 1 to 8814691)
  AUTHORS   Zhang,J.
  TITLE     Genome public
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8814691)
  AUTHORS   Zhang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2026) National Microbiology Data Center,
            Institute of Microbiology, Chinese Academy of Sciences, No. 1
            Beichen West Road, Chaoyang District, Beijing 100101, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBWM000000000.1.
            The Bradyrhizobium sp. WYCCWR15520 whole genome shotgun (WGS)
            project has the project accession NZ_JBWBWM000000000.  This version
            of the project (01) has the accession number NZ_JBWBWM010000000,
            and consists of sequences JBWBWM010000001-JBWBWM010000191.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 24-FEB-2026
            Assembly Method        :: SPAdes v. v3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056174665.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 18:20:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 8,563
            CDSs (total)                      :: 8,469
            Genes (coding)                    :: 8,174
            CDSs (with protein)               :: 8,174
            Genes (RNA)                       :: 94
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 85
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 295
            CDSs (without protein)            :: 295
            Pseudo Genes (ambiguous residues) :: 0 of 295
            Pseudo Genes (frameshifted)       :: 153 of 295
            Pseudo Genes (incomplete)         :: 195 of 295
            Pseudo Genes (internal stop)      :: 34 of 295
            Pseudo Genes (multiple problems)  :: 74 of 295
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8814691
                     /organism="Bradyrhizobium sp. WYCCWR15520"
                     /mol_type="genomic DNA"
                     /strain="WYCCWR15520"
                     /isolation_source="soil"
                     /host="peanut"
                     /db_xref="taxon:3694270"
                     /geo_loc_name="China: Henan Province"
                     /collection_date="2024-06"
WGS         JBWBWM010000001-JBWBWM010000191
WGS_SCAFLD  NZ_JBWBWM010000001-NZ_JBWBWM010000191
//
LOCUS       NZ_JBJKJI010000000   4045013 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Bdellovibrio sp. MYbb2, whole genome shotgun sequencing project.
ACCESSION   NZ_JBJKJI000000000
VERSION     NZ_JBJKJI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44701544
            Assembly: GCF_056175685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bdellovibrio sp. MYbb2
  ORGANISM  Bdellovibrio sp. MYbb2
            Bacteria; Pseudomonadati; Bdellovibrionota; Bdellovibrionia;
            Bdellovibrionales; Pseudobdellovibrionaceae; Bdellovibrio.
REFERENCE   1  (bases 1 to 4045013)
  AUTHORS   Maher,R.L., Wulbern,J., Zimmermann,J., Yeh,E., Benda,L., Repnik,U.,
            Fuss,J., Kunzel,S., Schulenburg,H., Bohannan,B.J.M., Adair,K.L. and
            Johnke,J.
  TITLE     Comparative analysis of novel Pseudobdellovibrionaceae genera and
            species yields insights into the genomics and evolution of
            bacterial predation mode
  JOURNAL   bioRxiv (2025)
   PUBMED   40027812
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4045013)
  AUTHORS   Maher,R.L., Wulbern,J., Zimmermann,J., Adair,K.L. and Johnke,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2024) Institute of Ecology and Evolution,
            University of Oregon, 5289 University of Oregon, Eugene, OR 97403,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKJI000000000.1.
            The Bdellovibrio sp. MYbb2 whole genome shotgun (WGS) project has
            the project accession NZ_JBJKJI000000000.  This version of the
            project (01) has the accession number NZ_JBJKJI010000000, and
            consists of sequences JBJKJI010000001-JBJKJI010000019.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 202x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056175685.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 18:26:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,859
            CDSs (total)                      :: 3,818
            Genes (coding)                    :: 3,805
            CDSs (with protein)               :: 3,805
            Genes (RNA)                       :: 41
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 34
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 0 of 13
            Pseudo Genes (incomplete)         :: 13 of 13
            Pseudo Genes (internal stop)      :: 0 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4045013
                     /organism="Bdellovibrio sp. MYbb2"
                     /mol_type="genomic DNA"
                     /strain="MYbb2"
                     /isolation_source="compost"
                     /db_xref="taxon:3379853"
                     /geo_loc_name="Germany: Kiel"
                     /collection_date="2016-11"
WGS         JBJKJI010000001-JBJKJI010000019
WGS_SCAFLD  NZ_JBJKJI010000001-NZ_JBJKJI010000019
//
LOCUS       NZ_WPHY01000000      6163410 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain CG98, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WPHY00000000
VERSION     NZ_WPHY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13451324
            Assembly: GCF_009744255.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 6163410)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Whole-genome sequencing of Allorhizobium vitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6163410)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2019) School of Life and Environmental Sciences,
            Deakin University, 75 Pidgons Road, Waurn Ponds, Victoria 3216,
            Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WPHY00000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_WPHY00000000.  This version of the project
            (01) has the accession number NZ_WPHY01000000, and consists of
            sequences WPHY01000001-WPHY01000089.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 41x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009744255.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:50:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,596
            CDSs (total)                      :: 5,538
            Genes (coding)                    :: 5,389
            CDSs (with protein)               :: 5,389
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 4, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 4 (16S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 149
            CDSs (without protein)            :: 149
            Pseudo Genes (ambiguous residues) :: 0 of 149
            Pseudo Genes (frameshifted)       :: 52 of 149
            Pseudo Genes (incomplete)         :: 107 of 149
            Pseudo Genes (internal stop)      :: 16 of 149
            Pseudo Genes (multiple problems)  :: 24 of 149
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6163410
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="CG98"
                     /isolation_source="Grape Gall"
                     /host="Vitis vinifera"
                     /db_xref="taxon:373"
                     /geo_loc_name="USA: Virginia"
                     /collected_by="Tom Burr"
WGS         WPHY01000001-WPHY01000089
WGS_SCAFLD  NZ_WPHY01000001-NZ_WPHY01000089
//
LOCUS       NZ_JAALXY010000000   6127929 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain T268/95, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAALXY000000000
VERSION     NZ_JAALXY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14165437
            Assembly: GCF_013317335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 6127929)
  AUTHORS   Weisberg,A.J., Davis,E.W. 2nd, Tabima,J., Belcher,M.S., Miller,M.,
            Kuo,C.H., Loper,J.E., Grunwald,N.J., Putnam,M.L. and Chang,J.H.
  TITLE     Unexpected conservation and global transmission of agrobacterial
            virulence plasmids
  JOURNAL   Science 368 (6495) (2020)
   PUBMED   32499412
REFERENCE   2  (bases 1 to 6127929)
  AUTHORS   Weisberg,A.J., Davis,E.W. II, Tabima,J.R., Belcher,M.S., Miller,M.,
            Kuo,C.-H., Loper,J.E., Grunwald,N.J., Putnam,M.L. and Chang,J.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-FEB-2020) Botany and Plant Pathology, Oregon State
            University, 2082 Cordley Hall, Oregon State University, Corvallis,
            OR 97330, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAALXY000000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_JAALXY000000000.  This version of the project
            (01) has the accession number NZ_JAALXY010000000, and consists of
            sequences JAALXY010000001-JAALXY010000062.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 85x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013317335.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:53:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,580
            CDSs (total)                      :: 5,524
            Genes (coding)                    :: 5,384
            CDSs (with protein)               :: 5,384
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 140
            CDSs (without protein)            :: 140
            Pseudo Genes (ambiguous residues) :: 0 of 140
            Pseudo Genes (frameshifted)       :: 52 of 140
            Pseudo Genes (incomplete)         :: 104 of 140
            Pseudo Genes (internal stop)      :: 15 of 140
            Pseudo Genes (multiple problems)  :: 28 of 140
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6127929
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="T268/95"
                     /host="Grape"
                     /db_xref="taxon:373"
                     /collection_date="1995"
WGS         JAALXY010000001-JAALXY010000062
WGS_SCAFLD  NZ_JAALXY010000001-NZ_JAALXY010000062
//
LOCUS       NZ_JABFNP010000000   5788705 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain K306, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JABFNP000000000
VERSION     NZ_JABFNP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14825643
            Assembly: GCF_013114765.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5788705)
  AUTHORS   Xi,H.
  TITLE     Allorhizobium vitis strain K306 complete genome
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5788705)
  AUTHORS   Xi,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-MAY-2020) School of Biological Sciences, The
            University of Adelaide, Adelaide SA 5005, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JABFNP000000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_JABFNP000000000.  This version of the project
            (01) has the accession number NZ_JABFNP010000000, and consists of
            sequences JABFNP010000001-JABFNP010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Molecular Life Sciences
            building, The university of Adelaide North Terrace Campus, SA5005.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 21-APR-2020
            Assembly Method        :: Flye v. 2.7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 257.0x
            Sequencing Technology  :: PacBio Sequel II
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013114765.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:50:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,222
            CDSs (total)                      :: 5,151
            Genes (coding)                    :: 5,038
            CDSs (with protein)               :: 5,038
            Genes (RNA)                       :: 71
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 113
            CDSs (without protein)            :: 113
            Pseudo Genes (ambiguous residues) :: 0 of 113
            Pseudo Genes (frameshifted)       :: 49 of 113
            Pseudo Genes (incomplete)         :: 77 of 113
            Pseudo Genes (internal stop)      :: 14 of 113
            Pseudo Genes (multiple problems)  :: 25 of 113
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5788705
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="K306"
                     /isolation_source="Barmera, South Australia"
                     /host="Vitis riparia"
                     /db_xref="taxon:373"
                     /geo_loc_name="Australia: South Australia"
                     /collection_date="1976"
WGS         JABFNP010000001-JABFNP010000004
WGS_SCAFLD  NZ_JABFNP010000001-NZ_JABFNP010000004
//
LOCUS       NZ_WPIB01000000      5737234 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain CG56, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WPIB00000000
VERSION     NZ_WPIB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13451321
            Assembly: GCF_009744335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5737234)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Whole-genome sequencing of Allorhizobium vitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5737234)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2019) School of Life and Environmental Sciences,
            Deakin University, 75 Pidgons Road, Waurn Ponds, Victoria 3216,
            Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WPIB00000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_WPIB00000000.  This version of the project
            (01) has the accession number NZ_WPIB01000000, and consists of
            sequences WPIB01000001-WPIB01000045.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 43x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009744335.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:45:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,204
            CDSs (total)                      :: 5,148
            Genes (coding)                    :: 5,037
            CDSs (with protein)               :: 5,037
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 41 of 111
            Pseudo Genes (incomplete)         :: 84 of 111
            Pseudo Genes (internal stop)      :: 19 of 111
            Pseudo Genes (multiple problems)  :: 26 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5737234
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="CG56"
                     /isolation_source="Grape Gall"
                     /host="Vitis vinifera"
                     /db_xref="taxon:373"
                     /geo_loc_name="USA: Michigan"
                     /collected_by="Tom Burr"
WGS         WPIB01000001-WPIB01000045
WGS_SCAFLD  NZ_WPIB01000001-NZ_WPIB01000045
//
LOCUS       NZ_QRFD01000000      5725697 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain SBV_10752, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QRFD00000000
VERSION     NZ_QRFD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09758748
            Assembly: GCF_008501865.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5725697)
  AUTHORS   Visnovsky,S.B. and Pitman,A.R.
  TITLE     Genome sequencing of Agrobacterium vitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5725697)
  AUTHORS   Visnovsky,S.B. and Pitman,A.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-AUG-2018) Microbial Systems for Plant Protection, The
            New Zealand Institute for Plant and Food Research Ltd, Private Bag
            4704, Christchurch, Canterbury 8140, New Zealand
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QRFD00000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_QRFD00000000.  This version of the project
            (01) has the accession number NZ_QRFD01000000, and consists of
            sequences QRFD01000001-QRFD01000064.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 20.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_008501865.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:30:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,189
            CDSs (total)                      :: 5,136
            Genes (coding)                    :: 5,032
            CDSs (with protein)               :: 5,032
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 104
            CDSs (without protein)            :: 104
            Pseudo Genes (ambiguous residues) :: 0 of 104
            Pseudo Genes (frameshifted)       :: 41 of 104
            Pseudo Genes (incomplete)         :: 78 of 104
            Pseudo Genes (internal stop)      :: 14 of 104
            Pseudo Genes (multiple problems)  :: 27 of 104
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5725697
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="SBV_10752"
                     /host="grapevine"
                     /db_xref="taxon:373"
                     /geo_loc_name="Australia"
                     /collection_date="1977-01-01"
WGS         QRFD01000001-QRFD01000064
WGS_SCAFLD  NZ_QRFD01000001-NZ_QRFD01000064
//
LOCUS       NZ_WPID01000000      5915392 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain CG47, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WPID00000000
VERSION     NZ_WPID00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13451319
            Assembly: GCF_009744345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5915392)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Whole-genome sequencing of Allorhizobium vitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5915392)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2019) School of Life and Environmental Sciences,
            Deakin University, 75 Pidgons Road, Waurn Ponds, Victoria 3216,
            Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WPID00000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_WPID00000000.  This version of the project
            (01) has the accession number NZ_WPID01000000, and consists of
            sequences WPID01000001-WPID01000037.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 68x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009744345.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:50:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,469
            CDSs (total)                      :: 5,413
            Genes (coding)                    :: 5,292
            CDSs (with protein)               :: 5,292
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 121
            CDSs (without protein)            :: 121
            Pseudo Genes (ambiguous residues) :: 0 of 121
            Pseudo Genes (frameshifted)       :: 46 of 121
            Pseudo Genes (incomplete)         :: 88 of 121
            Pseudo Genes (internal stop)      :: 22 of 121
            Pseudo Genes (multiple problems)  :: 32 of 121
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5915392
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="CG47"
                     /isolation_source="Grape Gall"
                     /host="Vitis vinifera"
                     /db_xref="taxon:373"
                     /geo_loc_name="USA: New York"
                     /collected_by="Tom Burr"
WGS         WPID01000001-WPID01000037
WGS_SCAFLD  NZ_WPID01000001-NZ_WPID01000037
//
LOCUS       NZ_WPHM01000000      6037375 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain CG989, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WPHM00000000
VERSION     NZ_WPHM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13451336
            Assembly: GCF_009744055.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 6037375)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Whole-genome sequencing of Allorhizobium vitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6037375)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2019) School of Life and Environmental Sciences,
            Deakin University, 75 Pidgons Road, Waurn Ponds, Victoria 3216,
            Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WPHM00000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_WPHM00000000.  This version of the project
            (01) has the accession number NZ_WPHM01000000, and consists of
            sequences WPHM01000001-WPHM01000054.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 93x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009744055.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:47:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,494
            CDSs (total)                      :: 5,440
            Genes (coding)                    :: 5,321
            CDSs (with protein)               :: 5,321
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 119
            CDSs (without protein)            :: 119
            Pseudo Genes (ambiguous residues) :: 0 of 119
            Pseudo Genes (frameshifted)       :: 34 of 119
            Pseudo Genes (incomplete)         :: 91 of 119
            Pseudo Genes (internal stop)      :: 22 of 119
            Pseudo Genes (multiple problems)  :: 23 of 119
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6037375
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="CG989"
                     /isolation_source="Riesling grape gall"
                     /host="Vitis vinifera"
                     /db_xref="taxon:373"
                     /geo_loc_name="Germany"
                     /collection_date="1985"
                     /collected_by="E. Bien"
WGS         WPHM01000001-WPHM01000054
WGS_SCAFLD  NZ_WPHM01000001-NZ_WPHM01000054
//
LOCUS       NZ_JAALYC010000000   5963516 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain CG78, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAALYC000000000
VERSION     NZ_JAALYC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14165506
            Assembly: GCF_013317425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5963516)
  AUTHORS   Weisberg,A.J., Davis,E.W. 2nd, Tabima,J., Belcher,M.S., Miller,M.,
            Kuo,C.H., Loper,J.E., Grunwald,N.J., Putnam,M.L. and Chang,J.H.
  TITLE     Unexpected conservation and global transmission of agrobacterial
            virulence plasmids
  JOURNAL   Science 368 (6495) (2020)
   PUBMED   32499412
REFERENCE   2  (bases 1 to 5963516)
  AUTHORS   Weisberg,A.J., Davis,E.W. II, Tabima,J.R., Belcher,M.S., Miller,M.,
            Kuo,C.-H., Loper,J.E., Grunwald,N.J., Putnam,M.L. and Chang,J.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-FEB-2020) Botany and Plant Pathology, Oregon State
            University, 2082 Cordley Hall, Oregon State University, Corvallis,
            OR 97330, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAALYC000000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_JAALYC000000000.  This version of the project
            (01) has the accession number NZ_JAALYC010000000, and consists of
            sequences JAALYC010000001-JAALYC010000068.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 224x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013317425.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:49:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,413
            CDSs (total)                      :: 5,361
            Genes (coding)                    :: 5,230
            CDSs (with protein)               :: 5,230
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 131
            CDSs (without protein)            :: 131
            Pseudo Genes (ambiguous residues) :: 0 of 131
            Pseudo Genes (frameshifted)       :: 46 of 131
            Pseudo Genes (incomplete)         :: 103 of 131
            Pseudo Genes (internal stop)      :: 15 of 131
            Pseudo Genes (multiple problems)  :: 29 of 131
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5963516
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="CG78"
                     /host="Grape"
                     /db_xref="taxon:373"
WGS         JAALYC010000001-JAALYC010000068
WGS_SCAFLD  NZ_JAALYC010000001-NZ_JAALYC010000068
//
LOCUS       NZ_WPHN01000000      6234721 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain CG967, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WPHN00000000
VERSION     NZ_WPHN00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13451335
            Assembly: GCF_009744025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 6234721)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Whole-genome sequencing of Allorhizobium vitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6234721)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2019) School of Life and Environmental Sciences,
            Deakin University, 75 Pidgons Road, Waurn Ponds, Victoria 3216,
            Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WPHN00000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_WPHN00000000.  This version of the project
            (01) has the accession number NZ_WPHN01000000, and consists of
            sequences WPHN01000001-WPHN01000055.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 111x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009744025.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:52:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,742
            CDSs (total)                      :: 5,686
            Genes (coding)                    :: 5,562
            CDSs (with protein)               :: 5,562
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 124
            CDSs (without protein)            :: 124
            Pseudo Genes (ambiguous residues) :: 0 of 124
            Pseudo Genes (frameshifted)       :: 34 of 124
            Pseudo Genes (incomplete)         :: 101 of 124
            Pseudo Genes (internal stop)      :: 14 of 124
            Pseudo Genes (multiple problems)  :: 20 of 124
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6234721
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="CG967"
                     /isolation_source="Kerner grape gall"
                     /host="Vitis vinifera"
                     /db_xref="taxon:373"
                     /geo_loc_name="Spain: Orense"
                     /collection_date="1982"
                     /collected_by="Maria Lopez"
WGS         WPHN01000001-WPHN01000055
WGS_SCAFLD  NZ_WPHN01000001-NZ_WPHN01000055
//
LOCUS       NZ_JAALYG010000000   5889793 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain AV25/95, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAALYG000000000
VERSION     NZ_JAALYG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14165468
            Assembly: GCF_013317435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5889793)
  AUTHORS   Weisberg,A.J., Davis,E.W. 2nd, Tabima,J., Belcher,M.S., Miller,M.,
            Kuo,C.H., Loper,J.E., Grunwald,N.J., Putnam,M.L. and Chang,J.H.
  TITLE     Unexpected conservation and global transmission of agrobacterial
            virulence plasmids
  JOURNAL   Science 368 (6495) (2020)
   PUBMED   32499412
REFERENCE   2  (bases 1 to 5889793)
  AUTHORS   Weisberg,A.J., Davis,E.W. II, Tabima,J.R., Belcher,M.S., Miller,M.,
            Kuo,C.-H., Loper,J.E., Grunwald,N.J., Putnam,M.L. and Chang,J.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-FEB-2020) Botany and Plant Pathology, Oregon State
            University, 2082 Cordley Hall, Oregon State University, Corvallis,
            OR 97330, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAALYG000000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_JAALYG000000000.  This version of the project
            (01) has the accession number NZ_JAALYG010000000, and consists of
            sequences JAALYG010000001-JAALYG010000055.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 90x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013317435.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:50:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,342
            CDSs (total)                      :: 5,283
            Genes (coding)                    :: 5,162
            CDSs (with protein)               :: 5,162
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 3 (16S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 121
            CDSs (without protein)            :: 121
            Pseudo Genes (ambiguous residues) :: 0 of 121
            Pseudo Genes (frameshifted)       :: 48 of 121
            Pseudo Genes (incomplete)         :: 93 of 121
            Pseudo Genes (internal stop)      :: 18 of 121
            Pseudo Genes (multiple problems)  :: 33 of 121
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5889793
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="AV25/95"
                     /host="Grape"
                     /db_xref="taxon:373"
                     /collection_date="1995"
WGS         JAALYG010000001-JAALYG010000055
WGS_SCAFLD  NZ_JAALYG010000001-NZ_JAALYG010000055
//
LOCUS       NZ_WPHH01000000      5968163 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain Sz1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WPHH00000000
VERSION     NZ_WPHH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13451341
            Assembly: GCF_009743935.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5968163)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Whole-genome sequencing of Allorhizobium vitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5968163)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2019) School of Life and Environmental Sciences,
            Deakin University, 75 Pidgons Road, Waurn Ponds, Victoria 3216,
            Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WPHH00000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_WPHH00000000.  This version of the project
            (01) has the accession number NZ_WPHH01000000, and consists of
            sequences WPHH01000001-WPHH01000083.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 45x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009743935.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:00:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,437
            CDSs (total)                      :: 5,383
            Genes (coding)                    :: 5,227
            CDSs (with protein)               :: 5,227
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 156
            CDSs (without protein)            :: 156
            Pseudo Genes (ambiguous residues) :: 0 of 156
            Pseudo Genes (frameshifted)       :: 50 of 156
            Pseudo Genes (incomplete)         :: 123 of 156
            Pseudo Genes (internal stop)      :: 15 of 156
            Pseudo Genes (multiple problems)  :: 28 of 156
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5968163
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="Sz1"
                     /isolation_source="Pinot gris' grape crown gall"
                     /host="Vitis vinifera"
                     /db_xref="taxon:373"
                     /geo_loc_name="Hungary"
                     /collection_date="1981"
                     /collected_by="E. Szegedi"
WGS         WPHH01000001-WPHH01000083
WGS_SCAFLD  NZ_WPHH01000001-NZ_WPHH01000083
//
LOCUS       NZ_WPHQ01000000      6070662 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain CG988, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WPHQ00000000
VERSION     NZ_WPHQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13451332
            Assembly: GCF_009744095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 6070662)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Whole-genome sequencing of Allorhizobium vitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6070662)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2019) School of Life and Environmental Sciences,
            Deakin University, 75 Pidgons Road, Waurn Ponds, Victoria 3216,
            Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WPHQ00000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_WPHQ00000000.  This version of the project
            (01) has the accession number NZ_WPHQ01000000, and consists of
            sequences WPHQ01000001-WPHQ01000070.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 91x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009744095.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:48:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,539
            CDSs (total)                      :: 5,484
            Genes (coding)                    :: 5,376
            CDSs (with protein)               :: 5,376
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 39 of 108
            Pseudo Genes (incomplete)         :: 88 of 108
            Pseudo Genes (internal stop)      :: 12 of 108
            Pseudo Genes (multiple problems)  :: 27 of 108
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6070662
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="CG988"
                     /isolation_source="Scheurebe grape gall"
                     /host="Vitis vinifera"
                     /db_xref="taxon:373"
                     /geo_loc_name="Germany"
                     /collection_date="1985"
                     /collected_by="E. Bien"
WGS         WPHQ01000001-WPHQ01000070
WGS_SCAFLD  NZ_WPHQ01000001-NZ_WPHQ01000070
//
LOCUS       NZ_JAALXX010000000   5642024 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain T393/94, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAALXX000000000
VERSION     NZ_JAALXX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14165459
            Assembly: GCF_013317355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5642024)
  AUTHORS   Weisberg,A.J., Davis,E.W. 2nd, Tabima,J., Belcher,M.S., Miller,M.,
            Kuo,C.H., Loper,J.E., Grunwald,N.J., Putnam,M.L. and Chang,J.H.
  TITLE     Unexpected conservation and global transmission of agrobacterial
            virulence plasmids
  JOURNAL   Science 368 (6495) (2020)
   PUBMED   32499412
REFERENCE   2  (bases 1 to 5642024)
  AUTHORS   Weisberg,A.J., Davis,E.W. II, Tabima,J.R., Belcher,M.S., Miller,M.,
            Kuo,C.-H., Loper,J.E., Grunwald,N.J., Putnam,M.L. and Chang,J.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-FEB-2020) Botany and Plant Pathology, Oregon State
            University, 2082 Cordley Hall, Oregon State University, Corvallis,
            OR 97330, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAALXX000000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_JAALXX000000000.  This version of the project
            (01) has the accession number NZ_JAALXX010000000, and consists of
            sequences JAALXX010000001-JAALXX010000033.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 41x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013317355.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:42:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,158
            CDSs (total)                      :: 5,100
            Genes (coding)                    :: 4,985
            CDSs (with protein)               :: 4,985
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 115
            CDSs (without protein)            :: 115
            Pseudo Genes (ambiguous residues) :: 0 of 115
            Pseudo Genes (frameshifted)       :: 47 of 115
            Pseudo Genes (incomplete)         :: 83 of 115
            Pseudo Genes (internal stop)      :: 20 of 115
            Pseudo Genes (multiple problems)  :: 32 of 115
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5642024
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="T393/94"
                     /host="Grape"
                     /db_xref="taxon:373"
                     /collection_date="1994"
WGS         JAALXX010000001-JAALXX010000033
WGS_SCAFLD  NZ_JAALXX010000001-NZ_JAALXX010000033
//
LOCUS       NZ_WPHJ01000000      5969019 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Agrobacterium vitis strain CG1103, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WPHJ00000000
VERSION     NZ_WPHJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13451339
            Assembly: GCF_009743975.1
KEYWORDS    WGS; RefSeq.
SOURCE      Agrobacterium vitis (Allorhizobium vitis)
  ORGANISM  Agrobacterium vitis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Agrobacterium.
REFERENCE   1  (bases 1 to 5969019)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Whole-genome sequencing of Allorhizobium vitis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5969019)
  AUTHORS   Gan,H.M., Szegedi,E., Burr,T. and Savka,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2019) School of Life and Environmental Sciences,
            Deakin University, 75 Pidgons Road, Waurn Ponds, Victoria 3216,
            Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WPHJ00000000.1.
            The Agrobacterium vitis whole genome shotgun (WGS) project has the
            project accession NZ_WPHJ00000000.  This version of the project
            (01) has the accession number NZ_WPHJ01000000, and consists of
            sequences WPHJ01000001-WPHJ01000072.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 38x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009743975.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:56:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,438
            CDSs (total)                      :: 5,384
            Genes (coding)                    :: 5,236
            CDSs (with protein)               :: 5,236
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 148
            CDSs (without protein)            :: 148
            Pseudo Genes (ambiguous residues) :: 0 of 148
            Pseudo Genes (frameshifted)       :: 47 of 148
            Pseudo Genes (incomplete)         :: 117 of 148
            Pseudo Genes (internal stop)      :: 16 of 148
            Pseudo Genes (multiple problems)  :: 28 of 148
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5969019
                     /organism="Agrobacterium vitis"
                     /mol_type="genomic DNA"
                     /strain="CG1103"
                     /isolation_source="Pinot gris' grape crown gall"
                     /host="Vitis vinifera"
                     /db_xref="taxon:373"
                     /geo_loc_name="Hungary"
                     /collection_date="1981"
                     /collected_by="E. Szegedi"
WGS         WPHJ01000001-WPHJ01000072
WGS_SCAFLD  NZ_WPHJ01000001-NZ_WPHJ01000072
//
LOCUS       NZ_AANHVQ020000000   1739084 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain CFSAN096318, whole genome shotgun
            sequencing project.
ACCESSION   NZ_AANHVQ000000000
VERSION     NZ_AANHVQ000000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13656907
            Assembly: GCF_010226035.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1739084)
  AUTHORS   Barvo,V., Blondel,C.J., Porte,L., Weitzel,T. and
            Gonzalez-Escalona,N.
  TITLE     Draft Whole-Genome Sequences of 51 Campylobacter jejuni and 12
            Campylobacter coli clinical isolates from Chile
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1739084)
  AUTHORS   Kastanis,G. and Gonzalez-Escalona,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-FEB-2020) ORS/DM/MMSB, Food and Drug
            Administration-College Park, 5001 Campus Drive, College Park, MD
            20740-3835, USA
REFERENCE   3  (bases 1 to 1739084)
  CONSRTM   GenomeTrakr network: Whole genome sequencing for foodborne pathogen
            traceback
  TITLE     Direct Submission
  JOURNAL   Submitted (10-JAN-2020) Center for Food Safety and Applied
            Nutrition, US Food and Drug Administration, 5100 Paint Branch Pkwy,
            College Park, MD, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AANHVQ000000000.2.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_AANHVQ000000000.  This version of the project
            (02) has the accession number NZ_AANHVQ020000000, and consists of
            sequences AANHVQ020000001-AANHVQ020000034.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC Genomic Workbench v. 9.5.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 366x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_010226035.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:06:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,834
            CDSs (total)                      :: 1,792
            Genes (coding)                    :: 1,745
            CDSs (with protein)               :: 1,745
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 36
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 47
            CDSs (without protein)            :: 47
            Pseudo Genes (ambiguous residues) :: 0 of 47
            Pseudo Genes (frameshifted)       :: 25 of 47
            Pseudo Genes (incomplete)         :: 20 of 47
            Pseudo Genes (internal stop)      :: 7 of 47
            Pseudo Genes (multiple problems)  :: 5 of 47
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1739084
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="CFSAN096318"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /geo_loc_name="Chile"
                     /collection_date="2019-03-05"
                     /collected_by="Universidad Autonoma de Chile| Carlos
                     Blondel Laboratory"
WGS         AANHVQ020000001-AANHVQ020000034
WGS_SCAFLD  NZ_AANHVQ020000001-NZ_AANHVQ020000034
//
LOCUS       NZ_JAATKB010000000   1900986 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain 18QD2YX23C, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAATKB000000000
VERSION     NZ_JAATKB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14421000
            Assembly: GCF_013072605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1900986)
  AUTHORS   Liu,D., Liu,X., Li,X. and Wang,Y.
  TITLE     Emergence of enterococcal oxazolidinone and phenicol resistance
            gene optrA in Campylobacter
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1900986)
  AUTHORS   Liu,D., Liu,X., Li,X. and Wang,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAR-2020) College of Veterinary Medicine, China
            Agricultural University, 2 W. Yuanmingyuan Road, Beijing 100193,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAATKB000000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_JAATKB000000000.  This version of the project
            (01) has the accession number NZ_JAATKB010000000, and consists of
            sequences JAATKB010000001-JAATKB010000060.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013072605.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:07:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,033
            CDSs (total)                      :: 1,987
            Genes (coding)                    :: 1,910
            CDSs (with protein)               :: 1,910
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 35 of 77
            Pseudo Genes (incomplete)         :: 43 of 77
            Pseudo Genes (internal stop)      :: 6 of 77
            Pseudo Genes (multiple problems)  :: 6 of 77
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1900986
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="18QD2YX23C"
                     /isolation_source="cecal sample from slaughterhouse"
                     /host="duck"
                     /db_xref="taxon:195"
                     /geo_loc_name="China: Shandong"
                     /collection_date="2018-06"
WGS         JAATKB010000001-JAATKB010000060
WGS_SCAFLD  NZ_JAATKB010000001-NZ_JAATKB010000060
//
LOCUS       NZ_JAAMWE010000000   1678889 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain CFSAN093262, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAAMWE000000000
VERSION     NZ_JAAMWE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11487361
            Assembly: GCF_011067705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1678889)
  AUTHORS   Barvo,V., Blondel,C.J., Porte,L., Weitzel,T. and
            Gonzalez-Escalona,N.
  TITLE     Draft Whole-Genome Sequences of 51 Campylobacter jejuni and 12
            Campylobacter coli clinical isolates from Chile
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1678889)
  AUTHORS   Kastanis,G. and Gonzalez-Escalona,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-FEB-2020) ORS/DM/MMSB, Food and Drug
            Administration-College Park, 5001 Campus Drive, College Park, MD
            20740-3835, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAAMWE000000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_JAAMWE000000000.  This version of the project
            (01) has the accession number NZ_JAAMWE010000000, and consists of
            sequences JAAMWE010000001-JAAMWE010000026.
            The organism was changed to Campylobacter coli in April 2020
            
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC Genomic Workbench v. 9.5.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 147x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_011067705.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:57:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,767
            CDSs (total)                      :: 1,719
            Genes (coding)                    :: 1,678
            CDSs (with protein)               :: 1,678
            Genes (RNA)                       :: 48
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 41
            CDSs (without protein)            :: 41
            Pseudo Genes (ambiguous residues) :: 0 of 41
            Pseudo Genes (frameshifted)       :: 21 of 41
            Pseudo Genes (incomplete)         :: 17 of 41
            Pseudo Genes (internal stop)      :: 7 of 41
            Pseudo Genes (multiple problems)  :: 4 of 41
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1678889
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="CFSAN093262"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /geo_loc_name="Chile"
                     /collection_date="2017-12-04"
                     /collected_by="Carlos Blondel lab, Universidad Autonoma"
WGS         JAAMWE010000001-JAAMWE010000026
WGS_SCAFLD  NZ_JAAMWE010000001-NZ_JAAMWE010000026
//
LOCUS       NZ_JAAMWI010000000   1690423 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain CFSAN093254, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAAMWI000000000
VERSION     NZ_JAAMWI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11487362
            Assembly: GCF_011067835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1690423)
  AUTHORS   Barvo,V., Blondel,C.J., Porte,L., Weitzel,T. and
            Gonzalez-Escalona,N.
  TITLE     Draft Whole-Genome Sequences of 51 Campylobacter jejuni and 12
            Campylobacter coli clinical isolates from Chile
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1690423)
  AUTHORS   Kastanis,G. and Gonzalez-Escalona,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-FEB-2020) ORS/DM/MMSB, Food and Drug
            Administration-College Park, 5001 Campus Drive, College Park, MD
            20740-3835, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAAMWI000000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_JAAMWI000000000.  This version of the project
            (01) has the accession number NZ_JAAMWI010000000, and consists of
            sequences JAAMWI010000001-JAAMWI010000027.
            The organism was changed to Campylobacter coli in April 2020
            
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC Genomic Workbench v. 9.5.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 175x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_011067835.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:51:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,792
            CDSs (total)                      :: 1,746
            Genes (coding)                    :: 1,709
            CDSs (with protein)               :: 1,709
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 18 of 37
            Pseudo Genes (incomplete)         :: 16 of 37
            Pseudo Genes (internal stop)      :: 6 of 37
            Pseudo Genes (multiple problems)  :: 3 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1690423
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="CFSAN093254"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /geo_loc_name="Chile"
                     /collection_date="2018-02-28"
                     /collected_by="Carlos Blondel lab, Universidad Autonoma"
WGS         JAAMWI010000001-JAAMWI010000027
WGS_SCAFLD  NZ_JAAMWI010000001-NZ_JAAMWI010000027
//
LOCUS       NZ_AANOQC020000000   1735095 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain CFSAN096339, whole genome shotgun
            sequencing project.
ACCESSION   NZ_AANOQC000000000
VERSION     NZ_AANOQC000000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13656966
            Assembly: GCF_010359325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1735095)
  AUTHORS   Barvo,V., Blondel,C.J., Porte,L., Weitzel,T. and
            Gonzalez-Escalona,N.
  TITLE     Draft Whole-Genome Sequences of 51 Campylobacter jejuni and 12
            Campylobacter coli clinical isolates from Chile
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1735095)
  AUTHORS   Kastanis,G. and Gonzalez-Escalona,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-FEB-2020) ORS/DM/MMSB, Food and Drug
            Administration-College Park, 5001 Campus Drive, College Park, MD
            20740-3835, USA
REFERENCE   3  (bases 1 to 1735095)
  CONSRTM   GenomeTrakr network: Whole genome sequencing for foodborne pathogen
            traceback
  TITLE     Direct Submission
  JOURNAL   Submitted (10-JAN-2020) Center for Food Safety and Applied
            Nutrition, US Food and Drug Administration, 5100 Paint Branch Pkwy,
            College Park, MD, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            AANOQC000000000.2.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_AANOQC000000000.  This version of the project
            (02) has the accession number NZ_AANOQC020000000, and consists of
            sequences AANOQC020000001-AANOQC020000036.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC Genomic Workbench v. 9.5.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 664x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_010359325.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:04:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,838
            CDSs (total)                      :: 1,796
            Genes (coding)                    :: 1,745
            CDSs (with protein)               :: 1,745
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 36
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 23 of 51
            Pseudo Genes (incomplete)         :: 27 of 51
            Pseudo Genes (internal stop)      :: 6 of 51
            Pseudo Genes (multiple problems)  :: 5 of 51
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1735095
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="CFSAN096339"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /geo_loc_name="Chile"
                     /collection_date="2019-02-19"
                     /collected_by="Universidad Autonoma de Chile| Carlos
                     Blondel Laboratory"
WGS         AANOQC020000001-AANOQC020000036
WGS_SCAFLD  NZ_AANOQC020000001-NZ_AANOQC020000036
//
LOCUS       NZ_JAATKD010000000   1904640 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain 18QD2YX32C, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAATKD000000000
VERSION     NZ_JAATKD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14421002
            Assembly: GCF_013072565.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1904640)
  AUTHORS   Liu,D., Liu,X., Li,X. and Wang,Y.
  TITLE     Emergence of enterococcal oxazolidinone and phenicol resistance
            gene optrA in Campylobacter
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1904640)
  AUTHORS   Liu,D., Liu,X., Li,X. and Wang,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAR-2020) College of Veterinary Medicine, China
            Agricultural University, 2 W. Yuanmingyuan Road, Beijing 100193,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAATKD000000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_JAATKD000000000.  This version of the project
            (01) has the accession number NZ_JAATKD010000000, and consists of
            sequences JAATKD010000001-JAATKD010000057.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013072565.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:10:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 1,993
            Genes (coding)                    :: 1,917
            CDSs (with protein)               :: 1,917
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 34 of 76
            Pseudo Genes (incomplete)         :: 43 of 76
            Pseudo Genes (internal stop)      :: 6 of 76
            Pseudo Genes (multiple problems)  :: 6 of 76
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1904640
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="18QD2YX32C"
                     /isolation_source="cecal sample from slaughterhouse"
                     /host="duck"
                     /db_xref="taxon:195"
                     /geo_loc_name="China: Shandong"
                     /collection_date="2018-06"
WGS         JAATKD010000001-JAATKD010000057
WGS_SCAFLD  NZ_JAATKD010000001-NZ_JAATKD010000057
//
LOCUS       NZ_JAAMWD010000000   1672987 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain CFSAN093263, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAAMWD000000000
VERSION     NZ_JAAMWD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11487365
            Assembly: GCF_011067735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1672987)
  AUTHORS   Barvo,V., Blondel,C.J., Porte,L., Weitzel,T. and
            Gonzalez-Escalona,N.
  TITLE     Draft Whole-Genome Sequences of 51 Campylobacter jejuni and 12
            Campylobacter coli clinical isolates from Chile
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1672987)
  AUTHORS   Kastanis,G. and Gonzalez-Escalona,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-FEB-2020) ORS/DM/MMSB, Food and Drug
            Administration-College Park, 5001 Campus Drive, College Park, MD
            20740-3835, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAAMWD000000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_JAAMWD000000000.  This version of the project
            (01) has the accession number NZ_JAAMWD010000000, and consists of
            sequences JAAMWD010000001-JAAMWD010000023.
            The organism was changed to Campylobacter coli in April 2020
            
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC Genomic Workbench v. 9.5.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 172x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_011067735.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:01:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,778
            CDSs (total)                      :: 1,732
            Genes (coding)                    :: 1,688
            CDSs (with protein)               :: 1,688
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 44
            CDSs (without protein)            :: 44
            Pseudo Genes (ambiguous residues) :: 0 of 44
            Pseudo Genes (frameshifted)       :: 23 of 44
            Pseudo Genes (incomplete)         :: 19 of 44
            Pseudo Genes (internal stop)      :: 6 of 44
            Pseudo Genes (multiple problems)  :: 4 of 44
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1672987
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="CFSAN093263"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /geo_loc_name="Chile"
                     /collection_date="2018-01-20"
                     /collected_by="Carlos Blondel lab, Universidad Autonoma"
WGS         JAAMWD010000001-JAAMWD010000023
WGS_SCAFLD  NZ_JAAMWD010000001-NZ_JAAMWD010000023
//
LOCUS       NZ_JAAJZT010000000   1838551 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain 704192, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAAJZT000000000
VERSION     NZ_JAAJZT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14126199
            Assembly: GCF_013293225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1838551)
  AUTHORS   Hazen,T.H., Michalski,J.M., Tennant,S. and Rasko,D.A.
  TITLE     Genome sequencing of Campylobacter species
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1838551)
  AUTHORS   Hazen,T.H., Michalski,J.M., Tennant,S. and Rasko,D.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2020) Institute for Genome Sciences, School of
            Medicine, University of Maryland, 670 W. Baltimore St., Baltimore,
            MD 21201, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAAJZT000000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_JAAJZT000000000.  This version of the project
            (01) has the accession number NZ_JAAJZT010000000, and consists of
            sequences JAAJZT010000001-JAAJZT010000055.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: MAY-2019
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 618.6228992287948x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013293225.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:10:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,982
            CDSs (total)                      :: 1,932
            Genes (coding)                    :: 1,883
            CDSs (with protein)               :: 1,883
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 2, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 21 of 49
            Pseudo Genes (incomplete)         :: 28 of 49
            Pseudo Genes (internal stop)      :: 5 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1838551
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="704192"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /geo_loc_name="Pakistan"
                     /lat_lon="30.37 N 69.34 E"
                     /collected_by="University of Maryland, School of Medicine,
                     Center for Vaccine Development"
WGS         JAAJZT010000001-JAAJZT010000055
WGS_SCAFLD  NZ_JAAJZT010000001-NZ_JAAJZT010000055
//
LOCUS       NZ_VEVX01000000      1669283 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain SP15-082, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VEVX00000000
VERSION     NZ_VEVX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11959364
            Assembly: GCF_006349425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1669283)
  AUTHORS   Addetia,A., Greninger,A. and Fang,F.
  TITLE     Epidemiology of MDR Campylobacter spp.
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1669283)
  AUTHORS   Addetia,A., Greninger,A. and Fang,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2019) UW Virology, University of Washington, 850
            Republican St, Seattle, WA 98109, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VEVX00000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_VEVX00000000.  This version of the project
            (01) has the accession number NZ_VEVX01000000, and consists of
            sequences VEVX01000001-VEVX01000037.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 88.1x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_006349425.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:50:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,771
            CDSs (total)                      :: 1,727
            Genes (coding)                    :: 1,672
            CDSs (with protein)               :: 1,672
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 55
            CDSs (without protein)            :: 55
            Pseudo Genes (ambiguous residues) :: 0 of 55
            Pseudo Genes (frameshifted)       :: 26 of 55
            Pseudo Genes (incomplete)         :: 28 of 55
            Pseudo Genes (internal stop)      :: 6 of 55
            Pseudo Genes (multiple problems)  :: 5 of 55
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1669283
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="SP15-082"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /geo_loc_name="USA: Seattle, WA"
                     /collection_date="2015"
                     /collected_by="University of Washington"
WGS         VEVX01000001-VEVX01000037
WGS_SCAFLD  NZ_VEVX01000001-NZ_VEVX01000037
//
LOCUS       NZ_VAEZ01000000      1699290 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain MON338, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VAEZ00000000
VERSION     NZ_VAEZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11605024
            Assembly: GCF_007671245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1699290)
  AUTHORS   Ze,M., Boukerb,A.M., Henry,R., Deletic,A. and Mccarthy,D.T.
  TITLE     Understanding the sources and risks of Campylobacter to storm water
            constructed wetlands
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1699290)
  AUTHORS   Ze,M., Boukerb,A.M., Henry,R., Deletic,A. and Mccarthy,D.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) Environmental and Public Health
            Microbiology Laboratory, Monash University, Alliance Ln, Clayton
            VIC 3800, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAEZ00000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_VAEZ00000000.  This version of the project
            (01) has the accession number NZ_VAEZ01000000, and consists of
            sequences VAEZ01000001-VAEZ01000107.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. 1.2.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50-100x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007671245.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:02:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,783
            CDSs (total)                      :: 1,740
            Genes (coding)                    :: 1,664
            CDSs (with protein)               :: 1,664
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 18 of 76
            Pseudo Genes (incomplete)         :: 59 of 76
            Pseudo Genes (internal stop)      :: 4 of 76
            Pseudo Genes (multiple problems)  :: 3 of 76
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1699290
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="MON338"
                     /isolation_source="Troups Creek Wetland"
                     /db_xref="taxon:195"
                     /geo_loc_name="Australia"
                     /collection_date="2015-11-03"
                     /collected_by="EPHM Lab"
WGS         VAEZ01000001-VAEZ01000107
WGS_SCAFLD  NZ_VAEZ01000001-NZ_VAEZ01000107
//
LOCUS       NZ_VAEE01000000      1816197 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain MON332, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VAEE00000000
VERSION     NZ_VAEE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11605021
            Assembly: GCF_007671305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1816197)
  AUTHORS   Ze,M., Boukerb,A.M., Henry,R., Deletic,A. and Mccarthy,D.T.
  TITLE     Understanding the sources and risks of Campylobacter to storm water
            constructed wetlands
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1816197)
  AUTHORS   Ze,M., Boukerb,A.M., Henry,R., Deletic,A. and Mccarthy,D.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) Environmental and Public Health
            Microbiology Laboratory, Monash University, Alliance Ln, Clayton
            VIC 3800, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAEE00000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_VAEE00000000.  This version of the project
            (01) has the accession number NZ_VAEE01000000, and consists of
            sequences VAEE01000001-VAEE01000133.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. 1.2.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50-100x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007671305.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:04:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,925
            CDSs (total)                      :: 1,879
            Genes (coding)                    :: 1,806
            CDSs (with protein)               :: 1,806
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 73
            CDSs (without protein)            :: 73
            Pseudo Genes (ambiguous residues) :: 0 of 73
            Pseudo Genes (frameshifted)       :: 15 of 73
            Pseudo Genes (incomplete)         :: 56 of 73
            Pseudo Genes (internal stop)      :: 6 of 73
            Pseudo Genes (multiple problems)  :: 3 of 73
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1816197
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="MON332"
                     /isolation_source="Troups Creek Wetland"
                     /db_xref="taxon:195"
                     /geo_loc_name="Australia"
                     /collection_date="2015-08-25"
                     /collected_by="EPHM Lab"
WGS         VAEE01000001-VAEE01000133
WGS_SCAFLD  NZ_VAEE01000001-NZ_VAEE01000133
//
LOCUS       NZ_VAFE01000000      1771326 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain MON294, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VAFE00000000
VERSION     NZ_VAFE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11605005
            Assembly: GCF_007671645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1771326)
  AUTHORS   Ze,M., Boukerb,A.M., Henry,R., Deletic,A. and Mccarthy,D.T.
  TITLE     Understanding the sources and risks of Campylobacter to storm water
            constructed wetlands
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1771326)
  AUTHORS   Ze,M., Boukerb,A.M., Henry,R., Deletic,A. and Mccarthy,D.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) Environmental and Public Health
            Microbiology Laboratory, Monash University, Alliance Ln, Clayton
            VIC 3800, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAFE00000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_VAFE00000000.  This version of the project
            (01) has the accession number NZ_VAFE01000000, and consists of
            sequences VAFE01000001-VAFE01000219.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. 1.2.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50-100x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007671645.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:05:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,915
            CDSs (total)                      :: 1,871
            Genes (coding)                    :: 1,761
            CDSs (with protein)               :: 1,761
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 110
            CDSs (without protein)            :: 110
            Pseudo Genes (ambiguous residues) :: 0 of 110
            Pseudo Genes (frameshifted)       :: 20 of 110
            Pseudo Genes (incomplete)         :: 91 of 110
            Pseudo Genes (internal stop)      :: 6 of 110
            Pseudo Genes (multiple problems)  :: 6 of 110
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1771326
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="MON294"
                     /isolation_source="Troups Creek Wetland"
                     /db_xref="taxon:195"
                     /geo_loc_name="Australia"
                     /collection_date="2014-06-03"
                     /collected_by="EPHM Lab"
WGS         VAFE01000001-VAFE01000219
WGS_SCAFLD  NZ_VAFE01000001-NZ_VAFE01000219
//
LOCUS       NZ_VEWG01000000      1657216 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain 48777, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VEWG00000000
VERSION     NZ_VEWG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11959355
            Assembly: GCF_006349405.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1657216)
  AUTHORS   Addetia,A., Greninger,A. and Fang,F.
  TITLE     Epidemiology of MDR Campylobacter spp.
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1657216)
  AUTHORS   Addetia,A., Greninger,A. and Fang,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2019) UW Virology, University of Washington, 850
            Republican St, Seattle, WA 98109, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VEWG00000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_VEWG00000000.  This version of the project
            (01) has the accession number NZ_VEWG01000000, and consists of
            sequences VEWG01000001-VEWG01000031.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 59.6x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_006349405.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:45:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,721
            CDSs (total)                      :: 1,675
            Genes (coding)                    :: 1,633
            CDSs (with protein)               :: 1,633
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 23 of 42
            Pseudo Genes (incomplete)         :: 16 of 42
            Pseudo Genes (internal stop)      :: 3 of 42
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1657216
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="48777"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /geo_loc_name="Canada: Montreal, Quebec"
                     /collection_date="2018"
WGS         VEWG01000001-VEWG01000031
WGS_SCAFLD  NZ_VEWG01000001-NZ_VEWG01000031
//
LOCUS       NZ_VAFB01000000      1694468 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain MON313, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VAFB00000000
VERSION     NZ_VAFB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11605014
            Assembly: GCF_007671445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1694468)
  AUTHORS   Ze,M., Boukerb,A.M., Henry,R., Deletic,A. and Mccarthy,D.T.
  TITLE     Understanding the sources and risks of Campylobacter to storm water
            constructed wetlands
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1694468)
  AUTHORS   Ze,M., Boukerb,A.M., Henry,R., Deletic,A. and Mccarthy,D.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) Environmental and Public Health
            Microbiology Laboratory, Monash University, Alliance Ln, Clayton
            VIC 3800, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAFB00000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_VAFB00000000.  This version of the project
            (01) has the accession number NZ_VAFB01000000, and consists of
            sequences VAFB01000001-VAFB01000058.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. 1.2.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50-100x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007671445.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:58:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,764
            CDSs (total)                      :: 1,710
            Genes (coding)                    :: 1,653
            CDSs (with protein)               :: 1,653
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 57
            CDSs (without protein)            :: 57
            Pseudo Genes (ambiguous residues) :: 0 of 57
            Pseudo Genes (frameshifted)       :: 14 of 57
            Pseudo Genes (incomplete)         :: 43 of 57
            Pseudo Genes (internal stop)      :: 2 of 57
            Pseudo Genes (multiple problems)  :: 1 of 57
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1694468
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="MON313"
                     /isolation_source="Troups Creek Wetland"
                     /db_xref="taxon:195"
                     /geo_loc_name="Australia"
                     /collection_date="2014-09-24"
                     /collected_by="EPHM Lab"
WGS         VAFB01000001-VAFB01000058
WGS_SCAFLD  NZ_VAFB01000001-NZ_VAFB01000058
//
LOCUS       NZ_VAEC01000000      1711305 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain MON339, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VAEC00000000
VERSION     NZ_VAEC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11605025
            Assembly: GCF_007671235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1711305)
  AUTHORS   Ze,M., Boukerb,A.M., Henry,R., Deletic,A. and Mccarthy,D.T.
  TITLE     Understanding the sources and risks of Campylobacter to storm water
            constructed wetlands
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1711305)
  AUTHORS   Ze,M., Boukerb,A.M., Henry,R., Deletic,A. and Mccarthy,D.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) Environmental and Public Health
            Microbiology Laboratory, Monash University, Alliance Ln, Clayton
            VIC 3800, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAEC00000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_VAEC00000000.  This version of the project
            (01) has the accession number NZ_VAEC01000000, and consists of
            sequences VAEC01000001-VAEC01000077.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. 1.2.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50-100x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007671235.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:56:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,796
            CDSs (total)                      :: 1,742
            Genes (coding)                    :: 1,671
            CDSs (with protein)               :: 1,671
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 20 of 71
            Pseudo Genes (incomplete)         :: 53 of 71
            Pseudo Genes (internal stop)      :: 4 of 71
            Pseudo Genes (multiple problems)  :: 4 of 71
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1711305
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="MON339"
                     /isolation_source="Troups Creek Wetland"
                     /db_xref="taxon:195"
                     /geo_loc_name="Australia"
                     /collection_date="2015-11-03"
                     /collected_by="EPHM Lab"
WGS         VAEC01000001-VAEC01000077
WGS_SCAFLD  NZ_VAEC01000001-NZ_VAEC01000077
//
LOCUS       NZ_JAAMWK010000000   1748418 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain CFSAN093251, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAAMWK000000000
VERSION     NZ_JAAMWK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11487367
            Assembly: GCF_011067925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1748418)
  AUTHORS   Barvo,V., Blondel,C.J., Porte,L., Weitzel,T. and
            Gonzalez-Escalona,N.
  TITLE     Draft Whole-Genome Sequences of 51 Campylobacter jejuni and 12
            Campylobacter coli clinical isolates from Chile
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1748418)
  AUTHORS   Kastanis,G. and Gonzalez-Escalona,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-FEB-2020) ORS/DM/MMSB, Food and Drug
            Administration-College Park, 5001 Campus Drive, College Park, MD
            20740-3835, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAAMWK000000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_JAAMWK000000000.  This version of the project
            (01) has the accession number NZ_JAAMWK010000000, and consists of
            sequences JAAMWK010000001-JAAMWK010000040.
            The organism was changed to Campylobacter coli in April 2020
            
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC Genomic Workbench v. 9.5.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 135x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_011067925.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:56:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,897
            CDSs (total)                      :: 1,851
            Genes (coding)                    :: 1,786
            CDSs (with protein)               :: 1,786
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 25 of 65
            Pseudo Genes (incomplete)         :: 39 of 65
            Pseudo Genes (internal stop)      :: 6 of 65
            Pseudo Genes (multiple problems)  :: 5 of 65
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1748418
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="CFSAN093251"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /geo_loc_name="Chile"
                     /collection_date="2018-01-01"
                     /collected_by="Carlos Blondel lab, Universidad Autonoma"
WGS         JAAMWK010000001-JAAMWK010000040
WGS_SCAFLD  NZ_JAAMWK010000001-NZ_JAAMWK010000040
//
LOCUS       NZ_VOOT01000000      1858371 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain 16-43, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VOOT00000000
VERSION     NZ_VOOT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12409111
            Assembly: GCF_009756165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1858371)
  AUTHORS   Quintel,B.K., Prongay,K., Lewis,A.D., Raue,H.-P., Hendrickson,S.,
            Rhoades,N.S., Messaoudi,I., Gao,L., Slifka,M.K. and Amanna,I.J.
  TITLE     Vaccine-mediated protection against Campylobacter-associated
            enteric disease
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1858371)
  AUTHORS   Amanna,I.J., Rhoades,N.S., Messaoudi,I., Slifka,M.K. and
            Quintel,B.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JUL-2019) Research and Development, Najit
            Technologies, Inc., 15232 NW Greenbrier Parkway, Beaverton, OR
            97006, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VOOT00000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_VOOT00000000.  This version of the project
            (01) has the accession number NZ_VOOT01000000, and consists of
            sequences VOOT01000001-VOOT01000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method           :: Canu v. 1.8
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: CP017025.1
            Genome Coverage           :: 1046x
            Sequencing Technology     :: PacBio Sequel
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009756165.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:28:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,978
            CDSs (total)                      :: 1,922
            Genes (coding)                    :: 1,862
            CDSs (with protein)               :: 1,862
            Genes (RNA)                       :: 56
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 60
            CDSs (without protein)            :: 60
            Pseudo Genes (ambiguous residues) :: 0 of 60
            Pseudo Genes (frameshifted)       :: 34 of 60
            Pseudo Genes (incomplete)         :: 21 of 60
            Pseudo Genes (internal stop)      :: 7 of 60
            Pseudo Genes (multiple problems)  :: 2 of 60
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1858371
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="16-43"
                     /isolation_source="fecal sample"
                     /host="Rhesus macaque"
                     /db_xref="taxon:195"
                     /geo_loc_name="USA"
                     /lat_lon="45.523625 N 122.881408 W"
                     /collection_date="2016-05-15"
WGS         VOOT01000001-VOOT01000005
WGS_SCAFLD  NZ_VOOT01000001-NZ_VOOT01000005
//
LOCUS       NZ_JAATJZ010000000   1939122 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain 18QD2YX31C, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAATJZ000000000
VERSION     NZ_JAATJZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14420998
            Assembly: GCF_013072625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1939122)
  AUTHORS   Liu,D., Liu,X., Li,X. and Wang,Y.
  TITLE     Emergence of enterococcal oxazolidinone and phenicol resistance
            gene optrA in Campylobacter
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1939122)
  AUTHORS   Liu,D., Liu,X., Li,X. and Wang,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAR-2020) College of Veterinary Medicine, China
            Agricultural University, 2 W. Yuanmingyuan Road, Beijing 100193,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAATJZ000000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_JAATJZ000000000.  This version of the project
            (01) has the accession number NZ_JAATJZ010000000, and consists of
            sequences JAATJZ010000001-JAATJZ010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013072625.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:09:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,053
            CDSs (total)                      :: 1,997
            Genes (coding)                    :: 1,935
            CDSs (with protein)               :: 1,935
            Genes (RNA)                       :: 56
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 62
            CDSs (without protein)            :: 62
            Pseudo Genes (ambiguous residues) :: 0 of 62
            Pseudo Genes (frameshifted)       :: 37 of 62
            Pseudo Genes (incomplete)         :: 26 of 62
            Pseudo Genes (internal stop)      :: 6 of 62
            Pseudo Genes (multiple problems)  :: 6 of 62
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1939122
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="18QD2YX31C"
                     /isolation_source="cecal sample from slaughterhouse"
                     /host="duck"
                     /db_xref="taxon:195"
                     /geo_loc_name="China: Shandong"
                     /collection_date="2018-06"
WGS         JAATJZ010000001-JAATJZ010000005
WGS_SCAFLD  NZ_JAATJZ010000001-NZ_JAATJZ010000005
//
LOCUS       NZ_VEWC01000000      1710039 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain 143970, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VEWC00000000
VERSION     NZ_VEWC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11959359
            Assembly: GCF_006370375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1710039)
  AUTHORS   Addetia,A., Greninger,A. and Fang,F.
  TITLE     Epidemiology of MDR Campylobacter spp.
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1710039)
  AUTHORS   Addetia,A., Greninger,A. and Fang,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2019) UW Virology, University of Washington, 850
            Republican St, Seattle, WA 98109, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VEWC00000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_VEWC00000000.  This version of the project
            (01) has the accession number NZ_VEWC01000000, and consists of
            sequences VEWC01000001-VEWC01000040.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 42.9x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_006370375.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:52:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,806
            CDSs (total)                      :: 1,760
            Genes (coding)                    :: 1,702
            CDSs (with protein)               :: 1,702
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 58
            CDSs (without protein)            :: 58
            Pseudo Genes (ambiguous residues) :: 0 of 58
            Pseudo Genes (frameshifted)       :: 27 of 58
            Pseudo Genes (incomplete)         :: 29 of 58
            Pseudo Genes (internal stop)      :: 9 of 58
            Pseudo Genes (multiple problems)  :: 7 of 58
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1710039
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="143970"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /geo_loc_name="Canada: Montreal, Quebec"
                     /collection_date="2015"
WGS         VEWC01000001-VEWC01000040
WGS_SCAFLD  NZ_VEWC01000001-NZ_VEWC01000040
//
LOCUS       NZ_JBPXXC010000000   1653977 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain DSC42-1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBPXXC000000000
VERSION     NZ_JBPXXC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087008
            Assembly: GCF_051846135.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1653977)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 1653977)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXXC000000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_JBPXXC000000000.  This version of the project
            (01) has the accession number NZ_JBPXXC010000000, and consists of
            sequences JBPXXC010000001-JBPXXC010000017.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051846135.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:18:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,725
            CDSs (total)                      :: 1,682
            Genes (coding)                    :: 1,633
            CDSs (with protein)               :: 1,633
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 31 of 49
            Pseudo Genes (incomplete)         :: 18 of 49
            Pseudo Genes (internal stop)      :: 6 of 49
            Pseudo Genes (multiple problems)  :: 6 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1653977
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="DSC42-1"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:195"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXXC010000001-JBPXXC010000017
WGS_SCAFLD  NZ_JBPXXC010000001-NZ_JBPXXC010000017
//
LOCUS       NZ_VAFD01000000      1683713 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain MON298, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VAFD00000000
VERSION     NZ_VAFD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11605006
            Assembly: GCF_007671625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1683713)
  AUTHORS   Ze,M., Boukerb,A.M., Henry,R., Deletic,A. and Mccarthy,D.T.
  TITLE     Understanding the sources and risks of Campylobacter to storm water
            constructed wetlands
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1683713)
  AUTHORS   Ze,M., Boukerb,A.M., Henry,R., Deletic,A. and Mccarthy,D.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) Environmental and Public Health
            Microbiology Laboratory, Monash University, Alliance Ln, Clayton
            VIC 3800, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAFD00000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_VAFD00000000.  This version of the project
            (01) has the accession number NZ_VAFD01000000, and consists of
            sequences VAFD01000001-VAFD01000102.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. 1.2.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50-100x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007671625.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:03:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,736
            CDSs (total)                      :: 1,686
            Genes (coding)                    :: 1,641
            CDSs (with protein)               :: 1,641
            Genes (RNA)                       :: 50
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 45
            CDSs (without protein)            :: 45
            Pseudo Genes (ambiguous residues) :: 0 of 45
            Pseudo Genes (frameshifted)       :: 12 of 45
            Pseudo Genes (incomplete)         :: 34 of 45
            Pseudo Genes (internal stop)      :: 1 of 45
            Pseudo Genes (multiple problems)  :: 2 of 45
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1683713
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="MON298"
                     /isolation_source="Troups Creek Wetland"
                     /db_xref="taxon:195"
                     /geo_loc_name="Australia"
                     /collection_date="2014-07-01"
                     /collected_by="EPHM Lab"
WGS         VAFD01000001-VAFD01000102
WGS_SCAFLD  NZ_VAFD01000001-NZ_VAFD01000102
//
LOCUS       NZ_VOPE01000000      1862001 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain 13-74, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VOPE00000000
VERSION     NZ_VOPE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12409098
            Assembly: GCF_009756345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1862001)
  AUTHORS   Quintel,B.K., Prongay,K., Lewis,A.D., Raue,H.-P., Hendrickson,S.,
            Rhoades,N.S., Messaoudi,I., Gao,L., Slifka,M.K. and Amanna,I.J.
  TITLE     Vaccine-mediated protection against Campylobacter-associated
            enteric disease
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1862001)
  AUTHORS   Amanna,I.J., Rhoades,N.S., Messaoudi,I., Slifka,M.K. and
            Quintel,B.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JUL-2019) Research and Development, Najit
            Technologies, Inc., 15232 NW Greenbrier Parkway, Beaverton, OR
            97006, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VOPE00000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_VOPE00000000.  This version of the project
            (01) has the accession number NZ_VOPE01000000, and consists of
            sequences VOPE01000001-VOPE01000019.
            
            ##Genome-Assembly-Data-START##
            Assembly Method           :: Canu v. 1.8
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: CP017025.1
            Genome Coverage           :: 1149x
            Sequencing Technology     :: PacBio Sequel
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009756345.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:28:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,978
            CDSs (total)                      :: 1,922
            Genes (coding)                    :: 1,869
            CDSs (with protein)               :: 1,869
            Genes (RNA)                       :: 56
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 53
            CDSs (without protein)            :: 53
            Pseudo Genes (ambiguous residues) :: 0 of 53
            Pseudo Genes (frameshifted)       :: 31 of 53
            Pseudo Genes (incomplete)         :: 22 of 53
            Pseudo Genes (internal stop)      :: 5 of 53
            Pseudo Genes (multiple problems)  :: 5 of 53
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1862001
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="13-74"
                     /isolation_source="fecal sample"
                     /host="Rhesus macaque"
                     /db_xref="taxon:195"
                     /geo_loc_name="USA"
                     /lat_lon="45.523625 N 122.881408 W"
                     /collection_date="2013-07-23"
WGS         VOPE01000001-VOPE01000019
WGS_SCAFLD  NZ_VOPE01000001-NZ_VOPE01000019
//
LOCUS       NZ_JAATKA010000000   1905957 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain 18QD2YX13C, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAATKA000000000
VERSION     NZ_JAATKA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14420999
            Assembly: GCF_013072545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1905957)
  AUTHORS   Liu,D., Liu,X., Li,X. and Wang,Y.
  TITLE     Emergence of enterococcal oxazolidinone and phenicol resistance
            gene optrA in Campylobacter
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1905957)
  AUTHORS   Liu,D., Liu,X., Li,X. and Wang,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAR-2020) College of Veterinary Medicine, China
            Agricultural University, 2 W. Yuanmingyuan Road, Beijing 100193,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAATKA000000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_JAATKA000000000.  This version of the project
            (01) has the accession number NZ_JAATKA010000000, and consists of
            sequences JAATKA010000001-JAATKA010000062.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013072545.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:06:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,042
            CDSs (total)                      :: 1,996
            Genes (coding)                    :: 1,919
            CDSs (with protein)               :: 1,919
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 34 of 77
            Pseudo Genes (incomplete)         :: 43 of 77
            Pseudo Genes (internal stop)      :: 6 of 77
            Pseudo Genes (multiple problems)  :: 5 of 77
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1905957
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="18QD2YX13C"
                     /isolation_source="cecal sample from slaughterhouse"
                     /host="duck"
                     /db_xref="taxon:195"
                     /geo_loc_name="China: Shandong"
                     /collection_date="2018-06"
WGS         JAATKA010000001-JAATKA010000062
WGS_SCAFLD  NZ_JAATKA010000001-NZ_JAATKA010000062
//
LOCUS       NZ_VEWE01000000      1742606 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain 138449, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VEWE00000000
VERSION     NZ_VEWE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11959357
            Assembly: GCF_006349415.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1742606)
  AUTHORS   Addetia,A., Greninger,A. and Fang,F.
  TITLE     Epidemiology of MDR Campylobacter spp.
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1742606)
  AUTHORS   Addetia,A., Greninger,A. and Fang,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2019) UW Virology, University of Washington, 850
            Republican St, Seattle, WA 98109, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VEWE00000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_VEWE00000000.  This version of the project
            (01) has the accession number NZ_VEWE01000000, and consists of
            sequences VEWE01000001-VEWE01000058.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 61.2x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_006349415.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:46:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,843
            CDSs (total)                      :: 1,797
            Genes (coding)                    :: 1,747
            CDSs (with protein)               :: 1,747
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 23 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 9 of 50
            Pseudo Genes (multiple problems)  :: 6 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1742606
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="138449"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /geo_loc_name="Canada: Montreal, Quebec"
                     /collection_date="2015"
WGS         VEWE01000001-VEWE01000058
WGS_SCAFLD  NZ_VEWE01000001-NZ_VEWE01000058
//
LOCUS       NZ_VOOW01000000      1680815 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain 15-27, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VOOW00000000
VERSION     NZ_VOOW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12409108
            Assembly: GCF_009756205.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1680815)
  AUTHORS   Quintel,B.K., Prongay,K., Lewis,A.D., Raue,H.-P., Hendrickson,S.,
            Rhoades,N.S., Messaoudi,I., Gao,L., Slifka,M.K. and Amanna,I.J.
  TITLE     Vaccine-mediated protection against Campylobacter-associated
            enteric disease
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1680815)
  AUTHORS   Amanna,I.J., Rhoades,N.S., Messaoudi,I., Slifka,M.K. and
            Quintel,B.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-AUG-2019) Research and Development, Najit
            Technologies, Inc., 15232 NW Greenbrier Parkway, Beaverton, OR
            97006, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VOOW00000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_VOOW00000000.  This version of the project
            (01) has the accession number NZ_VOOW01000000, and consists of
            sequences VOOW01000001-VOOW01000132.
            
            ##Genome-Assembly-Data-START##
            Assembly Method           :: SPAdes v. 3.11.0
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: CP017025.1
            Genome Coverage           :: 12.5x
            Sequencing Technology     :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009756205.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:38:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,878
            CDSs (total)                      :: 1,834
            Genes (coding)                    :: 1,737
            CDSs (with protein)               :: 1,737
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 97
            CDSs (without protein)            :: 97
            Pseudo Genes (ambiguous residues) :: 0 of 97
            Pseudo Genes (frameshifted)       :: 20 of 97
            Pseudo Genes (incomplete)         :: 76 of 97
            Pseudo Genes (internal stop)      :: 8 of 97
            Pseudo Genes (multiple problems)  :: 7 of 97
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1680815
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="15-27"
                     /isolation_source="fecal sample"
                     /host="Rhesus macaque"
                     /db_xref="taxon:195"
                     /geo_loc_name="USA"
                     /lat_lon="45.523625 N 122.881408 W"
                     /collection_date="2015-04-20"
WGS         VOOW01000001-VOOW01000132
WGS_SCAFLD  NZ_VOOW01000001-NZ_VOOW01000132
//
LOCUS       NZ_VAFA01000000      1689681 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain MON336, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VAFA00000000
VERSION     NZ_VAFA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11605023
            Assembly: GCF_007671275.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1689681)
  AUTHORS   Ze,M., Boukerb,A.M., Henry,R., Deletic,A. and Mccarthy,D.T.
  TITLE     Understanding the sources and risks of Campylobacter to storm water
            constructed wetlands
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1689681)
  AUTHORS   Ze,M., Boukerb,A.M., Henry,R., Deletic,A. and Mccarthy,D.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) Environmental and Public Health
            Microbiology Laboratory, Monash University, Alliance Ln, Clayton
            VIC 3800, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAFA00000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_VAFA00000000.  This version of the project
            (01) has the accession number NZ_VAFA01000000, and consists of
            sequences VAFA01000001-VAFA01000127.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. 1.2.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50-100x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007671275.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:03:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,776
            CDSs (total)                      :: 1,729
            Genes (coding)                    :: 1,661
            CDSs (with protein)               :: 1,661
            Genes (RNA)                       :: 47
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 16 of 68
            Pseudo Genes (incomplete)         :: 52 of 68
            Pseudo Genes (internal stop)      :: 2 of 68
            Pseudo Genes (multiple problems)  :: 1 of 68
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1689681
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="MON336"
                     /isolation_source="Troups Creek Wetland"
                     /db_xref="taxon:195"
                     /geo_loc_name="Australia"
                     /collection_date="2015-10-07"
                     /collected_by="EPHM Lab"
WGS         VAFA01000001-VAFA01000127
WGS_SCAFLD  NZ_VAFA01000001-NZ_VAFA01000127
//
LOCUS       NZ_VEVY01000000      1692247 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain SP18-232, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VEVY00000000
VERSION     NZ_VEVY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11959363
            Assembly: GCF_006349395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1692247)
  AUTHORS   Addetia,A., Greninger,A. and Fang,F.
  TITLE     Epidemiology of MDR Campylobacter spp.
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1692247)
  AUTHORS   Addetia,A., Greninger,A. and Fang,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2019) UW Virology, University of Washington, 850
            Republican St, Seattle, WA 98109, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VEVY00000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_VEVY00000000.  This version of the project
            (01) has the accession number NZ_VEVY01000000, and consists of
            sequences VEVY01000001-VEVY01000066.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 51.1x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_006349395.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:34:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,782
            CDSs (total)                      :: 1,737
            Genes (coding)                    :: 1,677
            CDSs (with protein)               :: 1,677
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 60
            CDSs (without protein)            :: 60
            Pseudo Genes (ambiguous residues) :: 0 of 60
            Pseudo Genes (frameshifted)       :: 21 of 60
            Pseudo Genes (incomplete)         :: 38 of 60
            Pseudo Genes (internal stop)      :: 5 of 60
            Pseudo Genes (multiple problems)  :: 4 of 60
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1692247
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="SP18-232"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /geo_loc_name="USA: Seattle, WA"
                     /collection_date="2018"
                     /collected_by="University of Washington"
WGS         VEVY01000001-VEVY01000066
WGS_SCAFLD  NZ_VEVY01000001-NZ_VEVY01000066
//
LOCUS       NZ_JAAMWP010000000   1672819 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain CFSAN093244, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAAMWP000000000
VERSION     NZ_JAAMWP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11487357
            Assembly: GCF_011068005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1672819)
  AUTHORS   Barvo,V., Blondel,C.J., Porte,L., Weitzel,T. and
            Gonzalez-Escalona,N.
  TITLE     Draft Whole-Genome Sequences of 51 Campylobacter jejuni and 12
            Campylobacter coli clinical isolates from Chile
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1672819)
  AUTHORS   Kastanis,G. and Gonzalez-Escalona,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-FEB-2020) ORS/DM/MMSB, Food and Drug
            Administration-College Park, 5001 Campus Drive, College Park, MD
            20740-3835, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAAMWP000000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_JAAMWP000000000.  This version of the project
            (01) has the accession number NZ_JAAMWP010000000, and consists of
            sequences JAAMWP010000001-JAAMWP010000021.
            The organism was changed to Campylobacter coli in April 2020
            
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC Genomic Workbench v. 9.5.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 155x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_011068005.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:01:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,776
            CDSs (total)                      :: 1,730
            Genes (coding)                    :: 1,687
            CDSs (with protein)               :: 1,687
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 23 of 43
            Pseudo Genes (incomplete)         :: 18 of 43
            Pseudo Genes (internal stop)      :: 6 of 43
            Pseudo Genes (multiple problems)  :: 4 of 43
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1672819
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="CFSAN093244"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /geo_loc_name="Chile"
                     /collection_date="2018-01-07"
                     /collected_by="Carlos Blondel lab, Universidad Autonoma"
WGS         JAAMWP010000001-JAAMWP010000021
WGS_SCAFLD  NZ_JAAMWP010000001-NZ_JAAMWP010000021
//
LOCUS       NZ_JAATJY010000000   1939129 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain 18QD2YX29C, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAATJY000000000
VERSION     NZ_JAATJY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14420997
            Assembly: GCF_013072645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1939129)
  AUTHORS   Liu,D., Liu,X., Li,X. and Wang,Y.
  TITLE     Emergence of enterococcal oxazolidinone and phenicol resistance
            gene optrA in Campylobacter
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1939129)
  AUTHORS   Liu,D., Liu,X., Li,X. and Wang,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAR-2020) College of Veterinary Medicine, China
            Agricultural University, 2 W. Yuanmingyuan Road, Beijing 100193,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAATJY000000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_JAATJY000000000.  This version of the project
            (01) has the accession number NZ_JAATJY010000000, and consists of
            sequences JAATJY010000001-JAATJY010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013072645.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:10:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 1,996
            Genes (coding)                    :: 1,935
            CDSs (with protein)               :: 1,935
            Genes (RNA)                       :: 56
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 61
            CDSs (without protein)            :: 61
            Pseudo Genes (ambiguous residues) :: 0 of 61
            Pseudo Genes (frameshifted)       :: 35 of 61
            Pseudo Genes (incomplete)         :: 26 of 61
            Pseudo Genes (internal stop)      :: 6 of 61
            Pseudo Genes (multiple problems)  :: 5 of 61
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1939129
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="18QD2YX29C"
                     /isolation_source="cecal sample from slaughterhouse"
                     /host="duck"
                     /db_xref="taxon:195"
                     /geo_loc_name="China: Shandong"
                     /collection_date="2018-06"
WGS         JAATJY010000001-JAATJY010000005
WGS_SCAFLD  NZ_JAATJY010000001-NZ_JAATJY010000005
//
LOCUS       NZ_VADS01000000      1898707 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain MON357, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VADS00000000
VERSION     NZ_VADS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11605038
            Assembly: GCF_007670935.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1898707)
  AUTHORS   Ze,M., Boukerb,A.M., Henry,R., Deletic,A. and Mccarthy,D.T.
  TITLE     Understanding the sources and risks of Campylobacter to storm water
            constructed wetlands
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1898707)
  AUTHORS   Ze,M., Boukerb,A.M., Henry,R., Deletic,A. and Mccarthy,D.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) Environmental and Public Health
            Microbiology Laboratory, Monash University, Alliance Ln, Clayton
            VIC 3800, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VADS00000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_VADS00000000.  This version of the project
            (01) has the accession number NZ_VADS01000000, and consists of
            sequences VADS01000001-VADS01000416.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. 1.2.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50-100x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007670935.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:00:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,209
            CDSs (total)                      :: 2,163
            Genes (coding)                    :: 1,963
            CDSs (with protein)               :: 1,963
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 200
            CDSs (without protein)            :: 200
            Pseudo Genes (ambiguous residues) :: 0 of 200
            Pseudo Genes (frameshifted)       :: 25 of 200
            Pseudo Genes (incomplete)         :: 176 of 200
            Pseudo Genes (internal stop)      :: 4 of 200
            Pseudo Genes (multiple problems)  :: 4 of 200
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1898707
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="MON357"
                     /isolation_source="Troups Creek Wetland"
                     /db_xref="taxon:195"
                     /geo_loc_name="Australia"
                     /collection_date="2015-05-15"
                     /collected_by="EPHM Lab"
WGS         VADS01000001-VADS01000416
WGS_SCAFLD  NZ_VADS01000001-NZ_VADS01000416
//
LOCUS       NZ_JAVTPD020000000   5671253 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Citrobacter freundii strain CF-2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAVTPD000000000
VERSION     NZ_JAVTPD000000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37521801
            Assembly: GCF_032193215.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter freundii
  ORGANISM  Citrobacter freundii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5671253)
  AUTHORS   Sommer,J., Reiter,H., Sattler,J., Cacace,E., Eisfeld,J.,
            Gatermann,S.G., Hamprecht,A. and Goettig,S.
  TITLE     Emergence of OXA-48-like producing Citrobacter spp. in Germany
            2012-2022
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5671253)
  AUTHORS   Sommer,J., Reiter,H., Sattler,J., Cacace,E., Eisfeld,J.,
            Gatermann,S.G., Hamprecht,A. and Goettig,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-DEC-2023) Institute for Medical Microbiology and
            Infection Control, University Hospital Frankfurt, Paul-Ehrlich-Str
            40, Frankfurt 60596, Germany
REFERENCE   3  (bases 1 to 5671253)
  AUTHORS   Sommer,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-SEP-2023) Institute for Medical Microbiology and
            Infection Control, University Hospital Frankfurt, Paul-Ehrlich-Str
            40, Frankfurt 60596, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAVTPD000000000.2.
            The Citrobacter freundii whole genome shotgun (WGS) project has the
            project accession NZ_JAVTPD000000000.  This version of the project
            (02) has the accession number NZ_JAVTPD020000000, and consists of
            sequences JAVTPD020000001-JAVTPD020000024.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: DEC-2023
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_032193215.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:51:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,625
            CDSs (total)                      :: 5,502
            Genes (coding)                    :: 5,376
            CDSs (with protein)               :: 5,376
            Genes (RNA)                       :: 123
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 126
            CDSs (without protein)            :: 126
            Pseudo Genes (ambiguous residues) :: 0 of 126
            Pseudo Genes (frameshifted)       :: 35 of 126
            Pseudo Genes (incomplete)         :: 97 of 126
            Pseudo Genes (internal stop)      :: 13 of 126
            Pseudo Genes (multiple problems)  :: 19 of 126
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5671253
                     /organism="Citrobacter freundii"
                     /mol_type="genomic DNA"
                     /strain="CF-2"
                     /isolation_source="rectal swab/stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:546"
                     /geo_loc_name="Germany"
                     /lat_lon="50.11 N 8.68 E"
                     /collection_date="2020"
                     /collected_by="University Hospital Bochum"
WGS         JAVTPD020000001-JAVTPD020000024
WGS_SCAFLD  NZ_JAVTPD020000001-NZ_JAVTPD020000024
//
LOCUS       NZ_JBPXXD010000000   1703013 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain DSC48, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBPXXD000000000
VERSION     NZ_JBPXXD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087009
            Assembly: GCF_051846095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1703013)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 1703013)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXXD000000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_JBPXXD000000000.  This version of the project
            (01) has the accession number NZ_JBPXXD010000000, and consists of
            sequences JBPXXD010000001-JBPXXD010000034.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051846095.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:16:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,807
            CDSs (total)                      :: 1,761
            Genes (coding)                    :: 1,700
            CDSs (with protein)               :: 1,700
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 61
            CDSs (without protein)            :: 61
            Pseudo Genes (ambiguous residues) :: 0 of 61
            Pseudo Genes (frameshifted)       :: 30 of 61
            Pseudo Genes (incomplete)         :: 30 of 61
            Pseudo Genes (internal stop)      :: 8 of 61
            Pseudo Genes (multiple problems)  :: 7 of 61
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1703013
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="DSC48"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:195"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXXD010000001-JBPXXD010000034
WGS_SCAFLD  NZ_JBPXXD010000001-NZ_JBPXXD010000034
//
LOCUS       NZ_JABFUS010000000   5022286 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Clostridium saccharobutylicum strain DJ096, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JABFUS000000000
VERSION     NZ_JABFUS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09070650
            Assembly: GCF_013149325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Clostridium saccharobutylicum
  ORGANISM  Clostridium saccharobutylicum
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium.
REFERENCE   1  (bases 1 to 5022286)
  AUTHORS   Liew,F.E., Nogle,R., Abdalla,T., Rasor,B.J., Canter,C.,
            Jensen,R.O., Wang,L., Strutz,J., Chirania,P., De Tissera,S.,
            Mueller,A.P., Ruan,Z., Gao,A., Tran,L., Engle,N.L., Bromley,J.C.,
            Daniell,J., Conrado,R., Tschaplinski,T.J., Giannone,R.J.,
            Hettich,R.L., Karim,A.S., Simpson,S.D., Brown,S.D., Leang,C.,
            Jewett,M.C. and Kopke,M.
  TITLE     Carbon-negative production of acetone and isopropanol by gas
            fermentation at industrial pilot scale
  JOURNAL   Nat Biotechnol 40 (3), 335-344 (2022)
   PUBMED   35190685
REFERENCE   2  (bases 1 to 5022286)
  AUTHORS   Brown,S., Huntemann,M., Clum,A., Spunde,A., Palaniappan,K.,
            Ritter,S., Mikhailova,N., Chen,I.-M., Stamatis,D., Reddy,T.,
            O'Malley,R., Daum,C., Shapiro,N., Ivanova,N., Kyrpides,N. and
            Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAY-2020) Prokaryote Super Program, DOE Joint Genome
            Institute, 1 Cyclotron Road, Mail Stop: 91R0183, Berkeley, CA
            94720, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JABFUS000000000.1.
            The Clostridium saccharobutylicum whole genome shotgun (WGS)
            project has the project accession NZ_JABFUS000000000.  This version
            of the project (01) has the accession number NZ_JABFUS010000000,
            and consists of sequences JABFUS010000001-JABFUS010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: HGAP v. 2.3.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 128.0x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013149325.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:39:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,504
            CDSs (total)                      :: 4,373
            Genes (coding)                    :: 4,256
            CDSs (with protein)               :: 4,256
            Genes (RNA)                       :: 131
            rRNAs                             :: 11, 11, 14 (5S, 16S, 23S)
            complete rRNAs                    :: 11, 11, 8 (5S, 16S, 23S)
            partial rRNAs                     :: 6 (23S)
            tRNAs                             :: 92
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 117
            CDSs (without protein)            :: 117
            Pseudo Genes (ambiguous residues) :: 0 of 117
            Pseudo Genes (frameshifted)       :: 57 of 117
            Pseudo Genes (incomplete)         :: 65 of 117
            Pseudo Genes (internal stop)      :: 26 of 117
            Pseudo Genes (multiple problems)  :: 27 of 117
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5022286
                     /organism="Clostridium saccharobutylicum"
                     /mol_type="genomic DNA"
                     /strain="DJ096"
                     /db_xref="taxon:169679"
WGS         JABFUS010000001-JABFUS010000004
WGS_SCAFLD  NZ_JABFUS010000001-NZ_JABFUS010000004
//
LOCUS       NZ_VOOZ01000000      1791303 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain 15-01, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VOOZ00000000
VERSION     NZ_VOOZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12409105
            Assembly: GCF_009756235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1791303)
  AUTHORS   Quintel,B.K., Prongay,K., Lewis,A.D., Raue,H.-P., Hendrickson,S.,
            Rhoades,N.S., Messaoudi,I., Gao,L., Slifka,M.K. and Amanna,I.J.
  TITLE     Vaccine-mediated protection against Campylobacter-associated
            enteric disease
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1791303)
  AUTHORS   Amanna,I.J., Rhoades,N.S., Messaoudi,I., Slifka,M.K. and
            Quintel,B.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-AUG-2019) Research and Development, Najit
            Technologies, Inc., 15232 NW Greenbrier Parkway, Beaverton, OR
            97006, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VOOZ00000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_VOOZ00000000.  This version of the project
            (01) has the accession number NZ_VOOZ01000000, and consists of
            sequences VOOZ01000001-VOOZ01000151.
            
            ##Genome-Assembly-Data-START##
            Assembly Method           :: SPAdes v. 3.11.0
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: CP017025.1
            Genome Coverage           :: 27.1x
            Sequencing Technology     :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009756235.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:31:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,008
            CDSs (total)                      :: 1,965
            Genes (coding)                    :: 1,870
            CDSs (with protein)               :: 1,870
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 36
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 95
            CDSs (without protein)            :: 95
            Pseudo Genes (ambiguous residues) :: 0 of 95
            Pseudo Genes (frameshifted)       :: 23 of 95
            Pseudo Genes (incomplete)         :: 68 of 95
            Pseudo Genes (internal stop)      :: 9 of 95
            Pseudo Genes (multiple problems)  :: 5 of 95
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1791303
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="15-01"
                     /isolation_source="fecal sample"
                     /host="Rhesus macaque"
                     /db_xref="taxon:195"
                     /geo_loc_name="USA"
                     /lat_lon="45.523625 N 122.881408 W"
                     /collection_date="2015-02-23"
WGS         VOOZ01000001-VOOZ01000151
WGS_SCAFLD  NZ_VOOZ01000001-NZ_VOOZ01000151
//
LOCUS       NZ_VADL01000000      1703438 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain MON386, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VADL00000000
VERSION     NZ_VADL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11605045
            Assembly: GCF_007670845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1703438)
  AUTHORS   Ze,M., Boukerb,A.M., Henry,R., Deletic,A. and Mccarthy,D.T.
  TITLE     Understanding the sources and risks of Campylobacter to storm water
            constructed wetlands
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1703438)
  AUTHORS   Ze,M., Boukerb,A.M., Henry,R., Deletic,A. and Mccarthy,D.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) Environmental and Public Health
            Microbiology Laboratory, Monash University, Alliance Ln, Clayton
            VIC 3800, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VADL00000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_VADL00000000.  This version of the project
            (01) has the accession number NZ_VADL01000000, and consists of
            sequences VADL01000001-VADL01000052.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. 1.2.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50-100x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007670845.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:01:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,800
            CDSs (total)                      :: 1,742
            Genes (coding)                    :: 1,681
            CDSs (with protein)               :: 1,681
            Genes (RNA)                       :: 58
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 61
            CDSs (without protein)            :: 61
            Pseudo Genes (ambiguous residues) :: 0 of 61
            Pseudo Genes (frameshifted)       :: 32 of 61
            Pseudo Genes (incomplete)         :: 29 of 61
            Pseudo Genes (internal stop)      :: 8 of 61
            Pseudo Genes (multiple problems)  :: 8 of 61
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1703438
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="MON386"
                     /isolation_source="Casey Hospital"
                     /db_xref="taxon:195"
                     /geo_loc_name="Australia"
                     /collection_date="2015-09-29"
                     /collected_by="EPHM Lab"
WGS         VADL01000001-VADL01000052
WGS_SCAFLD  NZ_VADL01000001-NZ_VADL01000052
//
LOCUS       NZ_JBPCPN010000000   2838401 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Candidatus Dormiibacter sp. isolate TH_ant_mag_183, whole
            genome shotgun sequencing project.
ACCESSION   NZ_JBPCPN000000000
VERSION     NZ_JBPCPN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN48920901
            Assembly: GCF_050999135.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Candidatus Dormiibacter sp. (sediment metagenome)
  ORGANISM  Candidatus Dormiibacter sp.
            Bacteria; Bacillati; Candidatus Dormiibacterota; Candidatus
            Dormibacteria; Candidatus Dormibacterales; Candidatus
            Dormibacteraceae; Candidatus Dormiibacter.
REFERENCE   1  (bases 1 to 2838401)
  AUTHORS   Ricci,F.
  TITLE     Resilient Antarctic soil bacteria oxidise trace gases across wide
            temperature ranges
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2838401)
  AUTHORS   Ricci,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-JUN-2025) Microbiology, Monash University,
            Wellington, Clayton, VIC 3800, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPCPN000000000.1.
            The Candidatus Dormiibacter sp. whole genome shotgun (WGS) project
            has the project accession NZ_JBPCPN000000000.  This version of the
            project (01) has the accession number NZ_JBPCPN010000000, and
            consists of sequences JBPCPN010000001-JBPCPN010000060.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2025
            Assembly Method        :: megahit v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 92.26x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_050999135.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:36:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,011
            CDSs (total)                      :: 2,960
            Genes (coding)                    :: 2,896
            CDSs (with protein)               :: 2,896
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 19 of 64
            Pseudo Genes (incomplete)         :: 49 of 64
            Pseudo Genes (internal stop)      :: 4 of 64
            Pseudo Genes (multiple problems)  :: 7 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2838401
                     /organism="Candidatus Dormiibacter sp."
                     /mol_type="genomic DNA"
                     /isolate="TH_ant_mag_183"
                     /isolation_source="thawed Antarctic sediment"
                     /db_xref="taxon:2973982"
                     /environmental_sample
                     /geo_loc_name="Antarctica"
                     /lat_lon="72.10588 S 13.44942 E"
                     /collection_date="2025-02"
                     /metagenome_source="sediment metagenome"
                     /metagenomic
WGS         JBPCPN010000001-JBPCPN010000060
WGS_SCAFLD  NZ_JBPCPN010000001-NZ_JBPCPN010000060
//
LOCUS       NZ_SYQE01000000      1577809 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain PHL17, whole genome shotgun sequencing
            project.
ACCESSION   NZ_SYQE00000000
VERSION     NZ_SYQE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11489506
            Assembly: GCF_006348115.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1577809)
  AUTHORS   Redondo,N., Carroll,A. and Mcnamara,E.
  TITLE     Molecular characterization of Campylobacter causing human clinical
            infection using whole-genome sequencing: virulence, antimicrobial
            resistance and phylogeny in Ireland
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1577809)
  AUTHORS   Redondo,N., Carroll,A. and Mcnamara,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-APR-2019) Public Health Laboratory-Dublin, Health
            Service Executive, Ballyfermot, Dublin D10, Ireland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SYQE00000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_SYQE00000000.  This version of the project
            (01) has the accession number NZ_SYQE01000000, and consists of
            sequence SYQE01000001.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 60.49718418x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_006348115.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:36:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,676
            CDSs (total)                      :: 1,636
            Genes (coding)                    :: 1,584
            CDSs (with protein)               :: 1,584
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 30 of 52
            Pseudo Genes (incomplete)         :: 27 of 52
            Pseudo Genes (internal stop)      :: 6 of 52
            Pseudo Genes (multiple problems)  :: 9 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1577809
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="PHL17"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /geo_loc_name="Ireland"
                     /collection_date="2007"
                     /genotype="ST257"
WGS         SYQE01000001
WGS_SCAFLD  NZ_SYQE01000001
//
LOCUS       NZ_VEWH01000000      1769240 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain 43371, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VEWH00000000
VERSION     NZ_VEWH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11959354
            Assembly: GCF_006349535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1769240)
  AUTHORS   Addetia,A., Greninger,A. and Fang,F.
  TITLE     Epidemiology of MDR Campylobacter spp.
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1769240)
  AUTHORS   Addetia,A., Greninger,A. and Fang,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2019) UW Virology, University of Washington, 850
            Republican St, Seattle, WA 98109, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VEWH00000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_VEWH00000000.  This version of the project
            (01) has the accession number NZ_VEWH01000000, and consists of
            sequences VEWH01000001-VEWH01000160.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 73.8x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_006349535.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:49:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,881
            CDSs (total)                      :: 1,834
            Genes (coding)                    :: 1,735
            CDSs (with protein)               :: 1,735
            Genes (RNA)                       :: 47
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 99
            CDSs (without protein)            :: 99
            Pseudo Genes (ambiguous residues) :: 0 of 99
            Pseudo Genes (frameshifted)       :: 27 of 99
            Pseudo Genes (incomplete)         :: 69 of 99
            Pseudo Genes (internal stop)      :: 6 of 99
            Pseudo Genes (multiple problems)  :: 3 of 99
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1769240
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="43371"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /geo_loc_name="Canada: Montreal, Quebec"
                     /collection_date="2017"
WGS         VEWH01000001-VEWH01000160
WGS_SCAFLD  NZ_VEWH01000001-NZ_VEWH01000160
//
LOCUS       NZ_JABFUH010000000   4735538 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Clostridium butyricum strain DJ065, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JABFUH000000000
VERSION     NZ_JABFUH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05878324
            Assembly: GCF_013149575.1
KEYWORDS    WGS; RefSeq.
SOURCE      Clostridium butyricum
  ORGANISM  Clostridium butyricum
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium.
REFERENCE   1  (bases 1 to 4735538)
  AUTHORS   Liew,F.E., Nogle,R., Abdalla,T., Rasor,B.J., Canter,C.,
            Jensen,R.O., Wang,L., Strutz,J., Chirania,P., De Tissera,S.,
            Mueller,A.P., Ruan,Z., Gao,A., Tran,L., Engle,N.L., Bromley,J.C.,
            Daniell,J., Conrado,R., Tschaplinski,T.J., Giannone,R.J.,
            Hettich,R.L., Karim,A.S., Simpson,S.D., Brown,S.D., Leang,C.,
            Jewett,M.C. and Kopke,M.
  TITLE     Carbon-negative production of acetone and isopropanol by gas
            fermentation at industrial pilot scale
  JOURNAL   Nat Biotechnol 40 (3), 335-344 (2022)
   PUBMED   35190685
REFERENCE   2  (bases 1 to 4735538)
  AUTHORS   Brown,S., Huntemann,M., Clum,A., Spunde,A., Palaniappan,K.,
            Ritter,S., Mikhailova,N., Chen,I.-M., Stamatis,D., Reddy,T.,
            O'Malley,R., Daum,C., Shapiro,N., Ivanova,N., Kyrpides,N. and
            Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAY-2020) Prokaryote Super Program, DOE Joint Genome
            Institute, 1 Cyclotron Road, Mail Stop: 91R0183, Berkeley, CA
            94720, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JABFUH000000000.1.
            The Clostridium butyricum whole genome shotgun (WGS) project has
            the project accession NZ_JABFUH000000000.  This version of the
            project (01) has the accession number NZ_JABFUH010000000, and
            consists of sequences JABFUH010000001-JABFUH010000003.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: HGAP v. 2.3.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 284.0x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013149575.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:36:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,454
            CDSs (total)                      :: 4,330
            Genes (coding)                    :: 4,192
            CDSs (with protein)               :: 4,192
            Genes (RNA)                       :: 124
            rRNAs                             :: 11, 11, 11 (5S, 16S, 23S)
            complete rRNAs                    :: 11, 11, 11 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 138
            CDSs (without protein)            :: 138
            Pseudo Genes (ambiguous residues) :: 0 of 138
            Pseudo Genes (frameshifted)       :: 55 of 138
            Pseudo Genes (incomplete)         :: 78 of 138
            Pseudo Genes (internal stop)      :: 20 of 138
            Pseudo Genes (multiple problems)  :: 14 of 138
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4735538
                     /organism="Clostridium butyricum"
                     /mol_type="genomic DNA"
                     /strain="DJ065"
                     /db_xref="taxon:1492"
WGS         JABFUH010000001-JABFUH010000003
WGS_SCAFLD  NZ_JABFUH010000001-NZ_JABFUH010000003
//
LOCUS       NZ_NRPE01000000      2729883 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Carnobacterium divergens strain C5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_NRPE00000000
VERSION     NZ_NRPE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07534360
            Assembly: GCF_004564525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Carnobacterium divergens
  ORGANISM  Carnobacterium divergens
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Carnobacterium.
REFERENCE   1  (bases 1 to 2729883)
  AUTHORS   Zhang,P., Badoni,M., Ganzle,M. and Yang,X.
  TITLE     Growth of Carnobacterium spp. isolated from chilled vacuum-packaged
            meat under relevant acidic conditions
  JOURNAL   Int J Food Microbiol 286, 120-127 (2018)
   PUBMED   30081251
REFERENCE   2  (bases 1 to 2729883)
  AUTHORS   Zhang,P. and Yang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-AUG-2017) Lacombe Research Centre, Meat Science
            Building, Agriculture and Agri-Food Canada, 6000 C and E Trail,
            Lacombe, AB T4L 1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NRPE00000000.1.
            The Carnobacterium divergens whole genome shotgun (WGS) project has
            the project accession NZ_NRPE00000000.  This version of the project
            (01) has the accession number NZ_NRPE01000000, and consists of
            sequences NRPE01000001-NRPE01000022.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria available from Lacombe Research Centre, 6000 C and E
            Trail, Lacombe, Alberta, T4L 1W1.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-MAY-2017
            Assembly Method        :: SPAdes Galaxy v. 1.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 46x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004564525.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:37:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,674
            CDSs (total)                      :: 2,625
            Genes (coding)                    :: 2,601
            CDSs (with protein)               :: 2,601
            Genes (RNA)                       :: 49
            rRNAs                             :: 6, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 3 of 24
            Pseudo Genes (incomplete)         :: 19 of 24
            Pseudo Genes (internal stop)      :: 4 of 24
            Pseudo Genes (multiple problems)  :: 2 of 24
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2729883
                     /organism="Carnobacterium divergens"
                     /mol_type="genomic DNA"
                     /strain="C5"
                     /isolation_source="Vacuum-packaged beef"
                     /db_xref="taxon:2748"
                     /geo_loc_name="Canada"
                     /collection_date="2017"
WGS         NRPE01000001-NRPE01000022
WGS_SCAFLD  NZ_NRPE01000001-NZ_NRPE01000022
//
LOCUS       NZ_VADY01000000      1802705 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain MON347, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VADY00000000
VERSION     NZ_VADY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11605030
            Assembly: GCF_007671125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1802705)
  AUTHORS   Ze,M., Boukerb,A.M., Henry,R., Deletic,A. and Mccarthy,D.T.
  TITLE     Understanding the sources and risks of Campylobacter to storm water
            constructed wetlands
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1802705)
  AUTHORS   Ze,M., Boukerb,A.M., Henry,R., Deletic,A. and Mccarthy,D.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) Environmental and Public Health
            Microbiology Laboratory, Monash University, Alliance Ln, Clayton
            VIC 3800, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VADY00000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_VADY00000000.  This version of the project
            (01) has the accession number NZ_VADY01000000, and consists of
            sequences VADY01000001-VADY01000104.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. 1.2.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50-100x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007671125.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:56:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,918
            CDSs (total)                      :: 1,864
            Genes (coding)                    :: 1,791
            CDSs (with protein)               :: 1,791
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 41
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 73
            CDSs (without protein)            :: 73
            Pseudo Genes (ambiguous residues) :: 0 of 73
            Pseudo Genes (frameshifted)       :: 18 of 73
            Pseudo Genes (incomplete)         :: 54 of 73
            Pseudo Genes (internal stop)      :: 3 of 73
            Pseudo Genes (multiple problems)  :: 1 of 73
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1802705
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="MON347"
                     /isolation_source="Troups Creek Wetland"
                     /db_xref="taxon:195"
                     /geo_loc_name="Australia"
                     /collection_date="2015-04-28"
                     /collected_by="EPHM Lab"
WGS         VADY01000001-VADY01000104
WGS_SCAFLD  NZ_VADY01000001-NZ_VADY01000104
//
LOCUS       NZ_VEVU01000000      1703560 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain SP18-054, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VEVU00000000
VERSION     NZ_VEVU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11959367
            Assembly: GCF_006370255.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1703560)
  AUTHORS   Addetia,A., Greninger,A. and Fang,F.
  TITLE     Epidemiology of MDR Campylobacter spp.
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1703560)
  AUTHORS   Addetia,A., Greninger,A. and Fang,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2019) UW Virology, University of Washington, 850
            Republican St, Seattle, WA 98109, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VEVU00000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_VEVU00000000.  This version of the project
            (01) has the accession number NZ_VEVU01000000, and consists of
            sequences VEVU01000001-VEVU01000029.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 82.1x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_006370255.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:51:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,805
            CDSs (total)                      :: 1,759
            Genes (coding)                    :: 1,698
            CDSs (with protein)               :: 1,698
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 61
            CDSs (without protein)            :: 61
            Pseudo Genes (ambiguous residues) :: 0 of 61
            Pseudo Genes (frameshifted)       :: 28 of 61
            Pseudo Genes (incomplete)         :: 29 of 61
            Pseudo Genes (internal stop)      :: 7 of 61
            Pseudo Genes (multiple problems)  :: 3 of 61
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1703560
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="SP18-054"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:195"
                     /geo_loc_name="USA: Seattle, WA"
                     /collection_date="2018"
                     /collected_by="University of Washington"
WGS         VEVU01000001-VEVU01000029
WGS_SCAFLD  NZ_VEVU01000001-NZ_VEVU01000029
//
LOCUS       NZ_JACGZA010000000   5005908 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Clostridium saccharobutylicum strain DJ224, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JACGZA000000000
VERSION     NZ_JACGZA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12025558
            Assembly: GCF_014137845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Clostridium saccharobutylicum
  ORGANISM  Clostridium saccharobutylicum
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium.
REFERENCE   1  (bases 1 to 5005908)
  AUTHORS   Liew,F.E., Nogle,R., Abdalla,T., Rasor,B.J., Canter,C.,
            Jensen,R.O., Wang,L., Strutz,J., Chirania,P., De Tissera,S.,
            Mueller,A.P., Ruan,Z., Gao,A., Tran,L., Engle,N.L., Bromley,J.C.,
            Daniell,J., Conrado,R., Tschaplinski,T.J., Giannone,R.J.,
            Hettich,R.L., Karim,A.S., Simpson,S.D., Brown,S.D., Leang,C.,
            Jewett,M.C. and Kopke,M.
  TITLE     Carbon-negative production of acetone and isopropanol by gas
            fermentation at industrial pilot scale
  JOURNAL   Nat Biotechnol 40 (3), 335-344 (2022)
   PUBMED   35190685
REFERENCE   2  (bases 1 to 5005908)
  AUTHORS   Brown,S., Huntemann,M., Clum,A., Wang,J., Palaniappan,K.,
            Ritter,S., Chen,I.-M., Stamatis,D., Reddy,T., O'Malley,R., Daum,C.,
            Shapiro,N., Ivanova,N., Kyrpides,N. and Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JUN-2020) Prokaryote Super Program, DOE Joint Genome
            Institute, 1 Cyclotron Road, Mail Stop: 91R0183, Berkeley, CA
            94720, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JACGZA000000000.1.
            The Clostridium saccharobutylicum whole genome shotgun (WGS)
            project has the project accession NZ_JACGZA000000000.  This version
            of the project (01) has the accession number NZ_JACGZA010000000,
            and consists of sequences JACGZA010000001-JACGZA010000060.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 299.0x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_014137845.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:37:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,485
            CDSs (total)                      :: 4,393
            Genes (coding)                    :: 4,303
            CDSs (with protein)               :: 4,303
            Genes (RNA)                       :: 92
            rRNAs                             :: 10, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 6 (5S)
            partial rRNAs                     :: 4, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 90
            CDSs (without protein)            :: 90
            Pseudo Genes (ambiguous residues) :: 0 of 90
            Pseudo Genes (frameshifted)       :: 29 of 90
            Pseudo Genes (incomplete)         :: 67 of 90
            Pseudo Genes (internal stop)      :: 25 of 90
            Pseudo Genes (multiple problems)  :: 27 of 90
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5005908
                     /organism="Clostridium saccharobutylicum"
                     /mol_type="genomic DNA"
                     /strain="DJ224"
                     /db_xref="taxon:169679"
WGS         JACGZA010000001-JACGZA010000060
WGS_SCAFLD  NZ_JACGZA010000001-NZ_JACGZA010000060
//
LOCUS       NZ_VADN01000000      1704959 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain MON379, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VADN00000000
VERSION     NZ_VADN00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11605043
            Assembly: GCF_007670875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1704959)
  AUTHORS   Ze,M., Boukerb,A.M., Henry,R., Deletic,A. and Mccarthy,D.T.
  TITLE     Understanding the sources and risks of Campylobacter to storm water
            constructed wetlands
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1704959)
  AUTHORS   Ze,M., Boukerb,A.M., Henry,R., Deletic,A. and Mccarthy,D.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) Environmental and Public Health
            Microbiology Laboratory, Monash University, Alliance Ln, Clayton
            VIC 3800, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VADN00000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_VADN00000000.  This version of the project
            (01) has the accession number NZ_VADN01000000, and consists of
            sequences VADN01000001-VADN01000035.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. 1.2.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50-100x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007670875.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:59:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,820
            CDSs (total)                      :: 1,777
            Genes (coding)                    :: 1,715
            CDSs (with protein)               :: 1,715
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 62
            CDSs (without protein)            :: 62
            Pseudo Genes (ambiguous residues) :: 0 of 62
            Pseudo Genes (frameshifted)       :: 35 of 62
            Pseudo Genes (incomplete)         :: 26 of 62
            Pseudo Genes (internal stop)      :: 9 of 62
            Pseudo Genes (multiple problems)  :: 8 of 62
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1704959
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="MON379"
                     /isolation_source="Casey Hospital"
                     /db_xref="taxon:195"
                     /geo_loc_name="Australia"
                     /collection_date="2015-02-06"
                     /collected_by="EPHM Lab"
WGS         VADN01000001-VADN01000035
WGS_SCAFLD  NZ_VADN01000001-NZ_VADN01000035
//
LOCUS       NZ_NRPF01000000      2685854 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Carnobacterium divergens strain C4, whole genome shotgun sequencing
            project.
ACCESSION   NZ_NRPF00000000
VERSION     NZ_NRPF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07534359
            Assembly: GCF_004565095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Carnobacterium divergens
  ORGANISM  Carnobacterium divergens
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Carnobacterium.
REFERENCE   1  (bases 1 to 2685854)
  AUTHORS   Zhang,P., Badoni,M., Ganzle,M. and Yang,X.
  TITLE     Growth of Carnobacterium spp. isolated from chilled vacuum-packaged
            meat under relevant acidic conditions
  JOURNAL   Int J Food Microbiol 286, 120-127 (2018)
   PUBMED   30081251
REFERENCE   2  (bases 1 to 2685854)
  AUTHORS   Zhang,P. and Yang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-AUG-2017) Lacombe Research Centre, Meat Science
            Building, Agriculture and Agri-Food Canada, 6000 C and E Trail,
            Lacombe, AB T4L 1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NRPF00000000.1.
            The Carnobacterium divergens whole genome shotgun (WGS) project has
            the project accession NZ_NRPF00000000.  This version of the project
            (01) has the accession number NZ_NRPF01000000, and consists of
            sequences NRPF01000001-NRPF01000045.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria available from Lacombe Research Centre, 6000 C and E
            Trail, Lacombe, Alberta, T4L 1W1.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-MAY-2017
            Assembly Method        :: SPAdes Galaxy v. 1.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 31x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004565095.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:30:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,637
            CDSs (total)                      :: 2,581
            Genes (coding)                    :: 2,545
            CDSs (with protein)               :: 2,545
            Genes (RNA)                       :: 56
            rRNAs                             :: 6, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 45
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 10 of 36
            Pseudo Genes (incomplete)         :: 24 of 36
            Pseudo Genes (internal stop)      :: 3 of 36
            Pseudo Genes (multiple problems)  :: 1 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2685854
                     /organism="Carnobacterium divergens"
                     /mol_type="genomic DNA"
                     /strain="C4"
                     /isolation_source="Vacuum-packaged beef"
                     /db_xref="taxon:2748"
                     /geo_loc_name="Canada"
                     /collection_date="2017"
WGS         NRPF01000001-NRPF01000045
WGS_SCAFLD  NZ_NRPF01000001-NZ_NRPF01000045
//
LOCUS       NZ_VAEA01000000      1832573 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter coli strain MON344, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VAEA00000000
VERSION     NZ_VAEA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11605028
            Assembly: GCF_007671135.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter coli (Campylobacter hyoilei)
  ORGANISM  Campylobacter coli
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1832573)
  AUTHORS   Ze,M., Boukerb,A.M., Henry,R., Deletic,A. and Mccarthy,D.T.
  TITLE     Understanding the sources and risks of Campylobacter to storm water
            constructed wetlands
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1832573)
  AUTHORS   Ze,M., Boukerb,A.M., Henry,R., Deletic,A. and Mccarthy,D.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) Environmental and Public Health
            Microbiology Laboratory, Monash University, Alliance Ln, Clayton
            VIC 3800, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAEA00000000.1.
            The Campylobacter coli whole genome shotgun (WGS) project has the
            project accession NZ_VAEA00000000.  This version of the project
            (01) has the accession number NZ_VAEA01000000, and consists of
            sequences VAEA01000001-VAEA01000115.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. 1.2.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50-100x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007671135.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:02:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,949
            CDSs (total)                      :: 1,906
            Genes (coding)                    :: 1,839
            CDSs (with protein)               :: 1,839
            Genes (RNA)                       :: 43
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 20 of 67
            Pseudo Genes (incomplete)         :: 46 of 67
            Pseudo Genes (internal stop)      :: 7 of 67
            Pseudo Genes (multiple problems)  :: 5 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1832573
                     /organism="Campylobacter coli"
                     /mol_type="genomic DNA"
                     /strain="MON344"
                     /isolation_source="Troups Creek Wetland"
                     /db_xref="taxon:195"
                     /geo_loc_name="Australia"
                     /collection_date="2015-04-26"
                     /collected_by="EPHM Lab"
WGS         VAEA01000001-VAEA01000115
WGS_SCAFLD  NZ_VAEA01000001-NZ_VAEA01000115
//
LOCUS       NZ_JBBIGS010000000   4764139 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Chromobacterium haemolyticum isolate QH2F170213_bin_97, whole
            genome shotgun sequencing project.
ACCESSION   NZ_JBBIGS000000000
VERSION     NZ_JBBIGS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN31096890
            Assembly: GCF_037447415.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Chromobacterium haemolyticum (subsurface metagenome)
  ORGANISM  Chromobacterium haemolyticum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Chromobacteriaceae; Chromobacterium.
REFERENCE   1  (bases 1 to 4764139)
  AUTHORS   Rogers,T.J., Buongiorno,J., Jessen,G.L., Schrenk,M.O.,
            Fordyce,J.A., de Moor,J.M., Ramirez,C.J., Barry,P.H., Yucel,M.,
            Selci,M., Cordone,A., Giovannelli,D. and Lloyd,K.G.
  TITLE     Chemolithoautotroph distributions across the subsurface of a
            convergent margin
  JOURNAL   ISME J 17 (1), 140-150 (2023)
   PUBMED   36257972
REFERENCE   2  (bases 1 to 4764139)
  AUTHORS   Rogers,T.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-OCT-2022) Microbiology, University of Tennessee, 1311
            Cumberland Avenue, Knoxville, TN 37996, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBIGS000000000.1.
            The Chromobacterium haemolyticum whole genome shotgun (WGS) project
            has the project accession NZ_JBBIGS000000000.  This version of the
            project (01) has the accession number NZ_JBBIGS010000000, and
            consists of sequences JBBIGS010000001-JBBIGS010000133.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 27-MAR-2019
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037447415.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:28:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,469
            CDSs (total)                      :: 4,409
            Genes (coding)                    :: 4,354
            CDSs (with protein)               :: 4,354
            Genes (RNA)                       :: 60
            rRNAs                             :: 4 (5S)
            complete rRNAs                    :: 4 (5S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 55
            CDSs (without protein)            :: 55
            Pseudo Genes (ambiguous residues) :: 0 of 55
            Pseudo Genes (frameshifted)       :: 6 of 55
            Pseudo Genes (incomplete)         :: 48 of 55
            Pseudo Genes (internal stop)      :: 4 of 55
            Pseudo Genes (multiple problems)  :: 3 of 55
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4764139
                     /organism="Chromobacterium haemolyticum"
                     /mol_type="genomic DNA"
                     /isolate="QH2F170213_bin_97"
                     /isolation_source="fluid and sediments from hot springs
                     and volcanic lakes"
                     /db_xref="taxon:394935"
                     /environmental_sample
                     /geo_loc_name="Costa Rica"
                     /collection_date="2017-02"
                     /metagenome_source="subsurface metagenome"
                     /metagenomic
WGS         JBBIGS010000001-JBBIGS010000133
WGS_SCAFLD  NZ_JBBIGS010000001-NZ_JBBIGS010000133
//
LOCUS       NZ_JABANW010000000   6003256 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Clostridium beijerinckii strain DJ287, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JABANW000000000
VERSION     NZ_JABANW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14591197
            Assembly: GCF_014231215.1
KEYWORDS    WGS; RefSeq.
SOURCE      Clostridium beijerinckii
  ORGANISM  Clostridium beijerinckii
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium.
REFERENCE   1  (bases 1 to 6003256)
  AUTHORS   Liew,F.E., Nogle,R., Abdalla,T., Rasor,B.J., Canter,C.,
            Jensen,R.O., Wang,L., Strutz,J., Chirania,P., De Tissera,S.,
            Mueller,A.P., Ruan,Z., Gao,A., Tran,L., Engle,N.L., Bromley,J.C.,
            Daniell,J., Conrado,R., Tschaplinski,T.J., Giannone,R.J.,
            Hettich,R.L., Karim,A.S., Simpson,S.D., Brown,S.D., Leang,C.,
            Jewett,M.C. and Kopke,M.
  TITLE     Carbon-negative production of acetone and isopropanol by gas
            fermentation at industrial pilot scale
  JOURNAL   Nat Biotechnol 40 (3), 335-344 (2022)
   PUBMED   35190685
REFERENCE   2  (bases 1 to 6003256)
  AUTHORS   Brown,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2020) Computational Biology, LanzaTech Inc, 8045
            Lamon Avenue, Suite 400, Skokie, IL 60077, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JABANW000000000.1.
            The Clostridium beijerinckii whole genome shotgun (WGS) project has
            the project accession NZ_JABANW000000000.  This version of the
            project (01) has the accession number NZ_JABANW010000000, and
            consists of sequences JABANW010000001-JABANW010000102.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Dr. Steven Brown, 8045 Lamon
            Avenue, Skokie, Illinois, 60077, USA.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 69.8068788x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_014231215.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:42:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,366
            CDSs (total)                      :: 5,315
            Genes (coding)                    :: 5,239
            CDSs (with protein)               :: 5,239
            Genes (RNA)                       :: 51
            rRNAs                             :: 3, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 2, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 19 of 76
            Pseudo Genes (incomplete)         :: 57 of 76
            Pseudo Genes (internal stop)      :: 11 of 76
            Pseudo Genes (multiple problems)  :: 9 of 76
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6003256
                     /organism="Clostridium beijerinckii"
                     /mol_type="genomic DNA"
                     /strain="DJ287"
                     /isolation_source="Industrial ABE fermentation"
                     /db_xref="taxon:1520"
                     /collection_date="2007"
                     /collected_by="LanzaTech Inc"
WGS         JABANW010000001-JABANW010000102
WGS_SCAFLD  NZ_JABANW010000001-NZ_JABANW010000102
//
LOCUS       NZ_JBIGSW010000000   5191629 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Citrobacter amalonaticus strain CPE_E59, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGSW000000000
VERSION     NZ_JBIGSW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130418
            Assembly: GCF_045575435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter amalonaticus
  ORGANISM  Citrobacter amalonaticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter.
REFERENCE   1  (bases 1 to 5191629)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGSW000000000.1.
            The Citrobacter amalonaticus whole genome shotgun (WGS) project has
            the project accession NZ_JBIGSW000000000.  This version of the
            project (01) has the accession number NZ_JBIGSW010000000, and
            consists of sequences JBIGSW010000001-JBIGSW010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 166x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575435.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:42:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,945
            CDSs (total)                      :: 4,823
            Genes (coding)                    :: 4,735
            CDSs (with protein)               :: 4,735
            Genes (RNA)                       :: 122
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 88
            CDSs (without protein)            :: 88
            Pseudo Genes (ambiguous residues) :: 0 of 88
            Pseudo Genes (frameshifted)       :: 49 of 88
            Pseudo Genes (incomplete)         :: 46 of 88
            Pseudo Genes (internal stop)      :: 11 of 88
            Pseudo Genes (multiple problems)  :: 15 of 88
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5191629
                     /organism="Citrobacter amalonaticus"
                     /mol_type="genomic DNA"
                     /strain="CPE_E59"
                     /host="Homo sapiens"
                     /db_xref="taxon:35703"
                     /geo_loc_name="Singapore"
WGS         JBIGSW010000001-JBIGSW010000004
WGS_SCAFLD  NZ_JBIGSW010000001-NZ_JBIGSW010000004
//
LOCUS       NZ_VDFP01000000      2844764 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Companilactobacillus halodurans strain TMW 1.2172, whole genome
            shotgun sequencing project.
ACCESSION   NZ_VDFP00000000
VERSION     NZ_VDFP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11864209
            Assembly: GCF_009600985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Companilactobacillus halodurans
  ORGANISM  Companilactobacillus halodurans
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Companilactobacillus.
REFERENCE   1  (bases 1 to 2844764)
  AUTHORS   Schuster,J.A., Klingl,A., Vogel,R.F. and Ehrmann,M.A.
  TITLE     Polyphasic characterization of two novel Lactobacillus spp.
            isolated from blown salami packages: Description of Lactobacillus
            halodurans sp. nov. and Lactobacillus salsicarnum sp. nov
  JOURNAL   Syst Appl Microbiol 42 (6), 126023 (2019)
   PUBMED   31668878
REFERENCE   2  (bases 1 to 2844764)
  AUTHORS   Schuster,J.A. and Ehrmann,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-JUN-2019) Technische Mikrobiologie, Technische
            Universitaet Muenchen, Gregor-Mendel Str. 4, Freising 85354,
            Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VDFP00000000.1.
            The Companilactobacillus halodurans whole genome shotgun (WGS)
            project has the project accession NZ_VDFP00000000.  This version of
            the project (01) has the accession number NZ_VDFP01000000, and
            consists of sequences VDFP01000001-VDFP01000306.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: ABySS v. MAR-2019
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009600985.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:17:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,918
            CDSs (total)                      :: 2,852
            Genes (coding)                    :: 2,740
            CDSs (with protein)               :: 2,740
            Genes (RNA)                       :: 66
            rRNAs                             :: 5, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1 (5S, 16S)
            partial rRNAs                     :: 2, 3 (16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 112
            CDSs (without protein)            :: 112
            Pseudo Genes (ambiguous residues) :: 0 of 112
            Pseudo Genes (frameshifted)       :: 24 of 112
            Pseudo Genes (incomplete)         :: 71 of 112
            Pseudo Genes (internal stop)      :: 25 of 112
            Pseudo Genes (multiple problems)  :: 6 of 112
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2844764
                     /organism="Companilactobacillus halodurans"
                     /mol_type="genomic DNA"
                     /strain="TMW 1.2172"
                     /isolation_source="expanded salami packages"
                     /type_material="type strain of Companilactobacillus
                     halodurans"
                     /db_xref="taxon:2584183"
                     /geo_loc_name="Germany: Munich"
                     /collection_date="2018-11-13"
WGS         VDFP01000001-VDFP01000306
WGS_SCAFLD  NZ_VDFP01000001-NZ_VDFP01000306
//
LOCUS       NZ_JAUCGJ010000000   4406993 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Candidatus Venteria ishoeyi isolate HSG18, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAUCGJ000000000
VERSION     NZ_JAUCGJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN35709906
            Assembly: GCF_030378065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Candidatus Venteria ishoeyi
  ORGANISM  Candidatus Venteria ishoeyi
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Thiotrichales; Thiotrichaceae; Candidatus Venteria.
REFERENCE   1  (bases 1 to 4406993)
  AUTHORS   Fonseca,A.
  TITLE     Uncultivated large filamentous bacteria from sulfidic sediments
            reveal new species and different genomic features in energy
            metabolism and defense
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4406993)
  AUTHORS   Fonseca,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-JUN-2023) Department of Biology, Aarhus University,
            Ny Munkegade 116, Aarhus 8000, Denmark
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAUCGJ000000000.1.
            The Candidatus Venteria ishoeyi whole genome shotgun (WGS) project
            has the project accession NZ_JAUCGJ000000000.  This version of the
            project (01) has the accession number NZ_JAUCGJ010000000, and
            consists of sequences JAUCGJ010000001-JAUCGJ010000115.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2022
            Assembly Method        :: SPAdes v. 3.15.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 192x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_030378065.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:39:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,646
            CDSs (total)                      :: 3,597
            Genes (coding)                    :: 3,577
            CDSs (with protein)               :: 3,577
            Genes (RNA)                       :: 49
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 1 of 20
            Pseudo Genes (incomplete)         :: 19 of 20
            Pseudo Genes (internal stop)      :: 2 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4406993
                     /organism="Candidatus Venteria ishoeyi"
                     /mol_type="genomic DNA"
                     /isolate="HSG18"
                     /isolation_source="Marine sediments from a bay"
                     /db_xref="taxon:1899563"
                     /geo_loc_name="Chile: Bahia de Concepcion"
                     /lat_lon="36.36 S 73.00 W"
                     /collection_date="2009-02-04"
WGS         JAUCGJ010000001-JAUCGJ010000115
WGS_SCAFLD  NZ_JAUCGJ010000001-NZ_JAUCGJ010000115
//
LOCUS       NZ_JBPXXB010000000   1596472 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Campylobacter jejuni strain DSC92, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBPXXB000000000
VERSION     NZ_JBPXXB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087007
            Assembly: GCF_051846115.1
KEYWORDS    WGS; RefSeq.
SOURCE      Campylobacter jejuni
  ORGANISM  Campylobacter jejuni
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1596472)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 1596472)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXXB000000000.1.
            The Campylobacter jejuni whole genome shotgun (WGS) project has the
            project accession NZ_JBPXXB000000000.  This version of the project
            (01) has the accession number NZ_JBPXXB010000000, and consists of
            sequences JBPXXB010000001-JBPXXB010000016.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051846115.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:19:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,656
            CDSs (total)                      :: 1,610
            Genes (coding)                    :: 1,565
            CDSs (with protein)               :: 1,565
            Genes (RNA)                       :: 46
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 45
            CDSs (without protein)            :: 45
            Pseudo Genes (ambiguous residues) :: 0 of 45
            Pseudo Genes (frameshifted)       :: 27 of 45
            Pseudo Genes (incomplete)         :: 21 of 45
            Pseudo Genes (internal stop)      :: 1 of 45
            Pseudo Genes (multiple problems)  :: 4 of 45
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1596472
                     /organism="Campylobacter jejuni"
                     /mol_type="genomic DNA"
                     /strain="DSC92"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:197"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXXB010000001-JBPXXB010000016
WGS_SCAFLD  NZ_JBPXXB010000001-NZ_JBPXXB010000016
//
LOCUS       NZ_NRPX01000000      2776127 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Carnobacterium divergens strain A12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NRPX00000000
VERSION     NZ_NRPX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07534341
            Assembly: GCF_004564775.1
KEYWORDS    WGS; RefSeq.
SOURCE      Carnobacterium divergens
  ORGANISM  Carnobacterium divergens
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Carnobacterium.
REFERENCE   1  (bases 1 to 2776127)
  AUTHORS   Zhang,P., Badoni,M., Ganzle,M. and Yang,X.
  TITLE     Growth of Carnobacterium spp. isolated from chilled vacuum-packaged
            meat under relevant acidic conditions
  JOURNAL   Int J Food Microbiol 286, 120-127 (2018)
   PUBMED   30081251
REFERENCE   2  (bases 1 to 2776127)
  AUTHORS   Zhang,P. and Yang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-AUG-2017) Lacombe Research Centre, Meat Science
            Building, Agriculture and Agri-Food Canada, 6000 C and E Trail,
            Lacombe, AB T4L 1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NRPX00000000.1.
            The Carnobacterium divergens whole genome shotgun (WGS) project has
            the project accession NZ_NRPX00000000.  This version of the project
            (01) has the accession number NZ_NRPX01000000, and consists of
            sequences NRPX01000001-NRPX01000028.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria available from Lacombe Research Centre, 6000 C and E
            Trail, Lacombe, Alberta, T4L 1W1.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-MAY-2017
            Assembly Method        :: SPAdes Galaxy v. 1.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 39x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004564775.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:34:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,750
            CDSs (total)                      :: 2,686
            Genes (coding)                    :: 2,648
            CDSs (with protein)               :: 2,648
            Genes (RNA)                       :: 64
            rRNAs                             :: 7, 7, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5, 6 (5S, 16S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 38
            CDSs (without protein)            :: 38
            Pseudo Genes (ambiguous residues) :: 0 of 38
            Pseudo Genes (frameshifted)       :: 6 of 38
            Pseudo Genes (incomplete)         :: 25 of 38
            Pseudo Genes (internal stop)      :: 9 of 38
            Pseudo Genes (multiple problems)  :: 2 of 38
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2776127
                     /organism="Carnobacterium divergens"
                     /mol_type="genomic DNA"
                     /strain="A12"
                     /isolation_source="Vacuum-packaged beef"
                     /db_xref="taxon:2748"
                     /geo_loc_name="Canada"
                     /collection_date="2017"
WGS         NRPX01000001-NRPX01000028
WGS_SCAFLD  NZ_NRPX01000001-NZ_NRPX01000028
//
LOCUS       NZ_JAYLWD010000000   4347701 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Clostridioides difficile strain CDK1ELNT, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAYLWD000000000
VERSION     NZ_JAYLWD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39286545
            Assembly: GCF_037448835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Clostridioides difficile (Clostridium difficile)
  ORGANISM  Clostridioides difficile
            Bacteria; Bacillati; Bacillota; Clostridia; Peptostreptococcales;
            Peptostreptococcaceae; Clostridioides.
REFERENCE   1  (bases 1 to 4347701)
  AUTHORS   Tanja,N., Khadwal,A., Singh,N., Singh,I. and Mittal,A.
  TITLE     Genomic characterization of Clostridioides difficile associated
            with Hematopoietic Stem Cell Transplant recipients in a tertiary
            care referral center, Chandigarh, India
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4347701)
  AUTHORS   Taneja,N. and Khadwal,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JAN-2024) Medical Microbiology, Postgraduate
            Institute of Medical Education and Research, Sector 12, Madhya
            Marg, Chandigarh, Chandigarh 160012, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAYLWD000000000.1.
            The Clostridioides difficile whole genome shotgun (WGS) project has
            the project accession NZ_JAYLWD000000000.  This version of the
            project (01) has the accession number NZ_JAYLWD010000000, and
            consists of sequences JAYLWD010000001-JAYLWD010000063.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 05-JAN-2024
            Assembly Method        :: SPAdes v. 3.15.5--h95f258a_1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037448835.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:24:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,013
            CDSs (total)                      :: 3,952
            Genes (coding)                    :: 3,922
            CDSs (with protein)               :: 3,922
            Genes (RNA)                       :: 61
            rRNAs                             :: 4, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 30
            CDSs (without protein)            :: 30
            Pseudo Genes (ambiguous residues) :: 0 of 30
            Pseudo Genes (frameshifted)       :: 5 of 30
            Pseudo Genes (incomplete)         :: 23 of 30
            Pseudo Genes (internal stop)      :: 5 of 30
            Pseudo Genes (multiple problems)  :: 3 of 30
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4347701
                     /organism="Clostridioides difficile"
                     /mol_type="genomic DNA"
                     /strain="CDK1ELNT"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:1496"
                     /geo_loc_name="India"
                     /lat_lon="30.73629 N 76.7884 E"
                     /collection_date="2020"
                     /collected_by="Post Graduate Institute of Medical
                     Education & Research Chandigarh - India"
WGS         JAYLWD010000001-JAYLWD010000063
WGS_SCAFLD  NZ_JAYLWD010000001-NZ_JAYLWD010000063
//
LOCUS       NZ_JBLEOY010000000   1734962 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Candidatus Acidulodesulfobacterium sp. H_13, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBLEOY000000000
VERSION     NZ_JBLEOY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN46423327
            Assembly: GCF_048541835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Candidatus Acidulodesulfobacterium sp. H_13
  ORGANISM  Candidatus Acidulodesulfobacterium sp. H_13
            Bacteria; Deltaproteobacteria; Candidatus Acidulidesulfobacterales;
            Candidatus Acidulidesulfobacteraceae; Candidatus
            Acidulidesulfobacterium.
REFERENCE   1  (bases 1 to 1734962)
  AUTHORS   Ren,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-JAN-2025) College of Biological and Environmental
            Engineering, Zhejiang Shuren University, Shuren Rd, Hangzhou
            310058, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBLEOY000000000.1.
            The Candidatus Acidulodesulfobacterium sp. H_13 whole genome
            shotgun (WGS) project has the project accession NZ_JBLEOY000000000.
            This version of the project (01) has the accession number
            NZ_JBLEOY010000000, and consists of sequences
            JBLEOY010000001-JBLEOY010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2024
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 240.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_048541835.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:52:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,706
            CDSs (total)                      :: 1,653
            Genes (coding)                    :: 1,617
            CDSs (with protein)               :: 1,617
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 15 of 36
            Pseudo Genes (incomplete)         :: 24 of 36
            Pseudo Genes (internal stop)      :: 7 of 36
            Pseudo Genes (multiple problems)  :: 7 of 36
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1734962
                     /organism="Candidatus Acidulodesulfobacterium sp. H_13"
                     /mol_type="genomic DNA"
                     /strain="H_13"
                     /isolation_source="ocean"
                     /db_xref="taxon:3395470"
                     /geo_loc_name="Indian Ocean"
                     /collection_date="2019-05-19"
WGS         JBLEOY010000001-JBLEOY010000004
WGS_SCAFLD  NZ_JBLEOY010000001-NZ_JBLEOY010000004
//
LOCUS       NZ_NRPM01000000      2686673 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Carnobacterium divergens strain B5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_NRPM00000000
VERSION     NZ_NRPM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07534352
            Assembly: GCF_004564605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Carnobacterium divergens
  ORGANISM  Carnobacterium divergens
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Carnobacterium.
REFERENCE   1  (bases 1 to 2686673)
  AUTHORS   Zhang,P., Badoni,M., Ganzle,M. and Yang,X.
  TITLE     Growth of Carnobacterium spp. isolated from chilled vacuum-packaged
            meat under relevant acidic conditions
  JOURNAL   Int J Food Microbiol 286, 120-127 (2018)
   PUBMED   30081251
REFERENCE   2  (bases 1 to 2686673)
  AUTHORS   Zhang,P. and Yang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-AUG-2017) Lacombe Research Centre, Meat Science
            Building, Agriculture and Agri-Food Canada, 6000 C and E Trail,
            Lacombe, AB T4L 1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NRPM00000000.1.
            The Carnobacterium divergens whole genome shotgun (WGS) project has
            the project accession NZ_NRPM00000000.  This version of the project
            (01) has the accession number NZ_NRPM01000000, and consists of
            sequences NRPM01000001-NRPM01000046.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria available from Lacombe Research Centre, 6000 C and E
            Trail, Lacombe, Alberta, T4L 1W1.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-MAY-2017
            Assembly Method        :: SPAdes Galaxy v. 1.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 55x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004564605.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:34:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,643
            CDSs (total)                      :: 2,580
            Genes (coding)                    :: 2,546
            CDSs (with protein)               :: 2,546
            Genes (RNA)                       :: 63
            rRNAs                             :: 6, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 52
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 9 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 3 of 34
            Pseudo Genes (multiple problems)  :: 1 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2686673
                     /organism="Carnobacterium divergens"
                     /mol_type="genomic DNA"
                     /strain="B5"
                     /isolation_source="Vacuum-packaged beef"
                     /db_xref="taxon:2748"
                     /geo_loc_name="Canada"
                     /collection_date="2017"
WGS         NRPM01000001-NRPM01000046
WGS_SCAFLD  NZ_NRPM01000001-NZ_NRPM01000046
//
LOCUS       NZ_NROU01000000      2687797 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Carnobacterium divergens strain C15, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NROU00000000
VERSION     NZ_NROU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07534370
            Assembly: GCF_004564995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Carnobacterium divergens
  ORGANISM  Carnobacterium divergens
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Carnobacterium.
REFERENCE   1  (bases 1 to 2687797)
  AUTHORS   Zhang,P., Badoni,M., Ganzle,M. and Yang,X.
  TITLE     Growth of Carnobacterium spp. isolated from chilled vacuum-packaged
            meat under relevant acidic conditions
  JOURNAL   Int J Food Microbiol 286, 120-127 (2018)
   PUBMED   30081251
REFERENCE   2  (bases 1 to 2687797)
  AUTHORS   Zhang,P. and Yang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-AUG-2017) Lacombe Research Centre, Meat Science
            Building, Agriculture and Agri-Food Canada, 6000 C and E Trail,
            Lacombe, AB T4L 1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NROU00000000.1.
            The Carnobacterium divergens whole genome shotgun (WGS) project has
            the project accession NZ_NROU00000000.  This version of the project
            (01) has the accession number NZ_NROU01000000, and consists of
            sequences NROU01000001-NROU01000046.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria available from Lacombe Research Centre, 6000 C and E
            Trail, Lacombe, Alberta, T4L 1W1.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-MAY-2017
            Assembly Method        :: SPAdes Galaxy v. 1.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 47x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004564995.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:31:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,646
            CDSs (total)                      :: 2,582
            Genes (coding)                    :: 2,549
            CDSs (with protein)               :: 2,549
            Genes (RNA)                       :: 64
            rRNAs                             :: 7, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5 (5S)
            tRNAs                             :: 52
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 33
            CDSs (without protein)            :: 33
            Pseudo Genes (ambiguous residues) :: 0 of 33
            Pseudo Genes (frameshifted)       :: 9 of 33
            Pseudo Genes (incomplete)         :: 22 of 33
            Pseudo Genes (internal stop)      :: 3 of 33
            Pseudo Genes (multiple problems)  :: 1 of 33
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2687797
                     /organism="Carnobacterium divergens"
                     /mol_type="genomic DNA"
                     /strain="C15"
                     /isolation_source="Vacuum-packaged pork"
                     /db_xref="taxon:2748"
                     /geo_loc_name="Canada"
                     /collection_date="2017"
WGS         NROU01000001-NROU01000046
WGS_SCAFLD  NZ_NROU01000001-NZ_NROU01000046
//
LOCUS       NZ_JABSXL010000000   6139860 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Clostridium beijerinckii strain DJ127, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JABSXL000000000
VERSION     NZ_JABSXL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09070725
            Assembly: GCF_013294955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Clostridium beijerinckii
  ORGANISM  Clostridium beijerinckii
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium.
REFERENCE   1  (bases 1 to 6139860)
  AUTHORS   Liew,F.E., Nogle,R., Abdalla,T., Rasor,B.J., Canter,C.,
            Jensen,R.O., Wang,L., Strutz,J., Chirania,P., De Tissera,S.,
            Mueller,A.P., Ruan,Z., Gao,A., Tran,L., Engle,N.L., Bromley,J.C.,
            Daniell,J., Conrado,R., Tschaplinski,T.J., Giannone,R.J.,
            Hettich,R.L., Karim,A.S., Simpson,S.D., Brown,S.D., Leang,C.,
            Jewett,M.C. and Kopke,M.
  TITLE     Carbon-negative production of acetone and isopropanol by gas
            fermentation at industrial pilot scale
  JOURNAL   Nat Biotechnol 40 (3), 335-344 (2022)
   PUBMED   35190685
REFERENCE   2  (bases 1 to 6139860)
  AUTHORS   Brown,S., Huntemann,M., Clum,A., Spunde,A., Palaniappan,K.,
            Ritter,S., Mikhailova,N., Chen,I.-M., Stamatis,D., Reddy,T.,
            O'Malley,R., Daum,C., Shapiro,N., Ivanova,N., Kyrpides,N. and
            Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-MAY-2020) Prokaryote Super Program, DOE Joint Genome
            Institute, 1 Cyclotron Road, Mail Stop: 91R0183, Berkeley, CA
            94720, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JABSXL000000000.1.
            The Clostridium beijerinckii whole genome shotgun (WGS) project has
            the project accession NZ_JABSXL000000000.  This version of the
            project (01) has the accession number NZ_JABSXL010000000, and
            consists of sequence JABSXL010000001.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: HGAP v. 2.3.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 81.0x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013294955.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:49:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,531
            CDSs (total)                      :: 5,382
            Genes (coding)                    :: 5,270
            CDSs (with protein)               :: 5,270
            Genes (RNA)                       :: 149
            rRNAs                             :: 17, 16, 16 (5S, 16S, 23S)
            complete rRNAs                    :: 17, 16, 16 (5S, 16S, 23S)
            tRNAs                             :: 94
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 112
            CDSs (without protein)            :: 112
            Pseudo Genes (ambiguous residues) :: 0 of 112
            Pseudo Genes (frameshifted)       :: 68 of 112
            Pseudo Genes (incomplete)         :: 46 of 112
            Pseudo Genes (internal stop)      :: 11 of 112
            Pseudo Genes (multiple problems)  :: 11 of 112
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6139860
                     /organism="Clostridium beijerinckii"
                     /mol_type="genomic DNA"
                     /strain="DJ127"
                     /db_xref="taxon:1520"
WGS         JABSXL010000001
WGS_SCAFLD  NZ_JABSXL010000001
//
LOCUS       NZ_NRQA01000000      2773571 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Carnobacterium divergens strain A9, whole genome shotgun sequencing
            project.
ACCESSION   NZ_NRQA00000000
VERSION     NZ_NRQA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07534338
            Assembly: GCF_004565205.1
KEYWORDS    WGS; RefSeq.
SOURCE      Carnobacterium divergens
  ORGANISM  Carnobacterium divergens
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Carnobacterium.
REFERENCE   1  (bases 1 to 2773571)
  AUTHORS   Zhang,P., Badoni,M., Ganzle,M. and Yang,X.
  TITLE     Growth of Carnobacterium spp. isolated from chilled vacuum-packaged
            meat under relevant acidic conditions
  JOURNAL   Int J Food Microbiol 286, 120-127 (2018)
   PUBMED   30081251
REFERENCE   2  (bases 1 to 2773571)
  AUTHORS   Zhang,P. and Yang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-AUG-2017) Lacombe Research Centre, Meat Science
            Building, Agriculture and Agri-Food Canada, 6000 C and E Trail,
            Lacombe, AB T4L 1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NRQA00000000.1.
            The Carnobacterium divergens whole genome shotgun (WGS) project has
            the project accession NZ_NRQA00000000.  This version of the project
            (01) has the accession number NZ_NRQA01000000, and consists of
            sequences NRQA01000001-NRQA01000027.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria available from Lacombe Research Centre, 6000 C and E
            Trail, Lacombe, Alberta, T4L 1W1.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-MAY-2017
            Assembly Method        :: SPAdes Galaxy v. 1.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 46x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004565205.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:38:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,730
            CDSs (total)                      :: 2,680
            Genes (coding)                    :: 2,644
            CDSs (with protein)               :: 2,644
            Genes (RNA)                       :: 50
            rRNAs                             :: 6, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 2 (5S, 16S)
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 5 of 36
            Pseudo Genes (incomplete)         :: 23 of 36
            Pseudo Genes (internal stop)      :: 9 of 36
            Pseudo Genes (multiple problems)  :: 1 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2773571
                     /organism="Carnobacterium divergens"
                     /mol_type="genomic DNA"
                     /strain="A9"
                     /isolation_source="Vacuum-packaged beef"
                     /db_xref="taxon:2748"
                     /geo_loc_name="Canada"
                     /collection_date="2017"
WGS         NRQA01000001-NRQA01000027
WGS_SCAFLD  NZ_NRQA01000001-NZ_NRQA01000027
//
LOCUS       NZ_NROR01000000      2774884 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Carnobacterium divergens strain C18, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NROR00000000
VERSION     NZ_NROR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07534373
            Assembly: GCF_004564985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Carnobacterium divergens
  ORGANISM  Carnobacterium divergens
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Carnobacteriaceae; Carnobacterium.
REFERENCE   1  (bases 1 to 2774884)
  AUTHORS   Zhang,P., Badoni,M., Ganzle,M. and Yang,X.
  TITLE     Growth of Carnobacterium spp. isolated from chilled vacuum-packaged
            meat under relevant acidic conditions
  JOURNAL   Int J Food Microbiol 286, 120-127 (2018)
   PUBMED   30081251
REFERENCE   2  (bases 1 to 2774884)
  AUTHORS   Zhang,P. and Yang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-AUG-2017) Lacombe Research Centre, Meat Science
            Building, Agriculture and Agri-Food Canada, 6000 C and E Trail,
            Lacombe, AB T4L 1W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NROR00000000.1.
            The Carnobacterium divergens whole genome shotgun (WGS) project has
            the project accession NZ_NROR00000000.  This version of the project
            (01) has the accession number NZ_NROR01000000, and consists of
            sequences NROR01000001-NROR01000066.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria available from Lacombe Research Centre, 6000 C and E
            Trail, Lacombe, Alberta, T4L 1W1.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-MAY-2017
            Assembly Method        :: SPAdes Galaxy v. 1.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 50x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004564985.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:37:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,739
            CDSs (total)                      :: 2,672
            Genes (coding)                    :: 2,638
            CDSs (with protein)               :: 2,638
            Genes (RNA)                       :: 67
            rRNAs                             :: 7, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5, 2 (5S, 16S)
            tRNAs                             :: 53
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 7 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 6 of 34
            Pseudo Genes (multiple problems)  :: 2 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2774884
                     /organism="Carnobacterium divergens"
                     /mol_type="genomic DNA"
                     /strain="C18"
                     /isolation_source="Vacuum-packaged pork"
                     /db_xref="taxon:2748"
                     /geo_loc_name="Canada"
                     /collection_date="2017"
WGS         NROR01000001-NROR01000066
WGS_SCAFLD  NZ_NROR01000001-NZ_NROR01000066
//
LOCUS       NZ_JBAFSH010000000   5589148 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Citrobacter braakii strain KZN419, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBAFSH000000000
VERSION     NZ_JBAFSH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN38924562
            Assembly: GCF_037447825.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter braakii
  ORGANISM  Citrobacter braakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5589148)
  AUTHORS   Ramessar,K., Kumar,A. and Olaniran,A.O.
  TITLE     Whole Genome Sequence of Citrobacter sp. Isolated from Treated
            Wastewater Effluent and Receiving Surface Waters
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5589148)
  AUTHORS   Ramessar,K., Kumar,A. and Olaniran,A.O.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JAN-2024) Microbiology, University of KwaZulu Natal,
            University Road, Durban, KwaZulu-Natal 4091, South Africa
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAFSH000000000.1.
            The Citrobacter braakii whole genome shotgun (WGS) project has the
            project accession NZ_JBAFSH000000000.  This version of the project
            (01) has the accession number NZ_JBAFSH010000000, and consists of
            sequences JBAFSH010000001-JBAFSH010000018.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 14-DEC-2023
            Assembly Method        :: CLC NGS Cell v. 23.0.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12x
            Sequencing Technology  :: single
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037447825.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:40:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,411
            CDSs (total)                      :: 5,274
            Genes (coding)                    :: 5,188
            CDSs (with protein)               :: 5,188
            Genes (RNA)                       :: 137
            rRNAs                             :: 13, 12, 12 (5S, 16S, 23S)
            complete rRNAs                    :: 13, 10, 10 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 92
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 86
            CDSs (without protein)            :: 86
            Pseudo Genes (ambiguous residues) :: 0 of 86
            Pseudo Genes (frameshifted)       :: 27 of 86
            Pseudo Genes (incomplete)         :: 64 of 86
            Pseudo Genes (internal stop)      :: 11 of 86
            Pseudo Genes (multiple problems)  :: 13 of 86
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5589148
                     /organism="Citrobacter braakii"
                     /mol_type="genomic DNA"
                     /strain="KZN419"
                     /isolation_source="wastewater"
                     /db_xref="taxon:57706"
                     /geo_loc_name="South Africa: Durban"
                     /collection_date="2022-12-12"
                     /collected_by="Keri"
WGS         JBAFSH010000001-JBAFSH010000018
WGS_SCAFLD  NZ_JBAFSH010000001-NZ_JBAFSH010000018
//
LOCUS       NZ_JASOXP010000000   4840567 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Citrobacter koseri strain UMB8248, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JASOXP000000000
VERSION     NZ_JASOXP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34998694
            Assembly: GCF_030226245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter koseri
  ORGANISM  Citrobacter koseri
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter.
REFERENCE   1  (bases 1 to 4840567)
  AUTHORS   Du,J.
  TITLE     Genomic Catalog of Human Bladder Bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4840567)
  AUTHORS   Du,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAY-2023) LUMC, Loyola University Chicago, S 1st
            avenue, Chicago, IL 60153, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JASOXP000000000.1.
            The Citrobacter koseri whole genome shotgun (WGS) project has the
            project accession NZ_JASOXP000000000.  This version of the project
            (01) has the accession number NZ_JASOXP010000000, and consists of
            sequences JASOXP010000001-JASOXP010000050.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 218.71x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_030226245.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:37:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,640
            CDSs (total)                      :: 4,546
            Genes (coding)                    :: 4,485
            CDSs (with protein)               :: 4,485
            Genes (RNA)                       :: 94
            rRNAs                             :: 4, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 61
            CDSs (without protein)            :: 61
            Pseudo Genes (ambiguous residues) :: 0 of 61
            Pseudo Genes (frameshifted)       :: 20 of 61
            Pseudo Genes (incomplete)         :: 39 of 61
            Pseudo Genes (internal stop)      :: 11 of 61
            Pseudo Genes (multiple problems)  :: 7 of 61
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4840567
                     /organism="Citrobacter koseri"
                     /mol_type="genomic DNA"
                     /strain="UMB8248"
                     /isolation_source="Urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:545"
                     /geo_loc_name="USA: Maywood, IL"
                     /lat_lon="41.85911095 N 87.83527146 W"
WGS         JASOXP010000001-JASOXP010000050
WGS_SCAFLD  NZ_JASOXP010000001-NZ_JASOXP010000050
//
LOCUS       NZ_JBAFSG010000000   5658281 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Citrobacter braakii strain KZN420, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBAFSG000000000
VERSION     NZ_JBAFSG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN38924563
            Assembly: GCF_037447695.1
KEYWORDS    WGS; RefSeq.
SOURCE      Citrobacter braakii
  ORGANISM  Citrobacter braakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter
            freundii complex.
REFERENCE   1  (bases 1 to 5658281)
  AUTHORS   Ramessar,K., Kumar,A. and Olaniran,A.O.
  TITLE     Whole Genome Sequence of Citrobacter sp. Isolated from Treated
            Wastewater Effluent and Receiving Surface Waters
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5658281)
  AUTHORS   Ramessar,K., Kumar,A. and Olaniran,A.O.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JAN-2024) Microbiology, University of KwaZulu Natal,
            University Road, Durban, KwaZulu-Natal 4091, South Africa
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAFSG000000000.1.
            The Citrobacter braakii whole genome shotgun (WGS) project has the
            project accession NZ_JBAFSG000000000.  This version of the project
            (01) has the accession number NZ_JBAFSG010000000, and consists of
            sequences JBAFSG010000001-JBAFSG010000018.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 14-DEC-2023
            Assembly Method        :: CLC NGS Cell v. 23.0.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12x
            Sequencing Technology  :: single
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037447695.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:36:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,464
            CDSs (total)                      :: 5,342
            Genes (coding)                    :: 5,245
            CDSs (with protein)               :: 5,245
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 97
            CDSs (without protein)            :: 97
            Pseudo Genes (ambiguous residues) :: 0 of 97
            Pseudo Genes (frameshifted)       :: 31 of 97
            Pseudo Genes (incomplete)         :: 74 of 97
            Pseudo Genes (internal stop)      :: 13 of 97
            Pseudo Genes (multiple problems)  :: 18 of 97
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5658281
                     /organism="Citrobacter braakii"
                     /mol_type="genomic DNA"
                     /strain="KZN420"
                     /isolation_source="wastewater"
                     /db_xref="taxon:57706"
                     /geo_loc_name="South Africa: Durban"
                     /collection_date="2022-12-12"
                     /collected_by="Keri"
WGS         JBAFSG010000001-JBAFSG010000018
WGS_SCAFLD  NZ_JBAFSG010000001-NZ_JBAFSG010000018
//
LOCUS       NZ_JBWCAP010000000   1424802 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Candidatus Aciduliprofundum sp. HYA1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBWCAP000000000
VERSION     NZ_JBWCAP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56484957
            Assembly: GCF_056175085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Candidatus Aciduliprofundum sp. HYA1
  ORGANISM  Candidatus Aciduliprofundum sp. HYA1
            Archaea; Methanobacteriati; Thermoplasmatota; DHVE2 group;
            Candidatus Aciduliprofundum.
REFERENCE   1  (bases 1 to 1424802)
  AUTHORS   Hu,Y.
  TITLE     The complete genome and metabolic blueprint of a deep-sea
            hydrothermal Thermoplasmatota archaeon
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1424802)
  AUTHORS   Hu,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAR-2026) marine biology, IOCAS, nanhai road,
            Qingdao, shandong 310012, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWCAP000000000.1.
            The Candidatus Aciduliprofundum sp. HYA1 whole genome shotgun (WGS)
            project has the project accession NZ_JBWCAP000000000.  This version
            of the project (01) has the accession number NZ_JBWCAP010000000,
            and consists of sequence JBWCAP010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 2000.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056175085.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:52:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,534
            CDSs (total)                      :: 1,483
            Genes (coding)                    :: 1,478
            CDSs (with protein)               :: 1,478
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 3 of 5
            Pseudo Genes (incomplete)         :: 2 of 5
            Pseudo Genes (internal stop)      :: 1 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1424802
                     /organism="Candidatus Aciduliprofundum sp. HYA1"
                     /mol_type="genomic DNA"
                     /strain="HYA1"
                     /isolation_source="sediment"
                     /host="free living"
                     /db_xref="taxon:3695394"
                     /geo_loc_name="Atlantic Ocean: Broken Spur hydrothermal
                     vent, Mid-Atlantic Ridge"
                     /collection_date="2024-03-01"
WGS         JBWCAP010000001
WGS_SCAFLD  NZ_CM149694
//
LOCUS       NZ_JAJFDX010000000   6123416 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Clostridium pacaense strain DFI.6.51A, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAJFDX000000000
VERSION     NZ_JAJFDX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN22167542
            Assembly: GCF_020709355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Clostridium pacaense
  ORGANISM  Clostridium pacaense
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium.
REFERENCE   1  (bases 1 to 6123416)
  AUTHORS   Lin,H., Littmann,E., Kohout,C. and Pamer,E.G.
  TITLE     Collection of gut derived symbiotic bacterial strains cultured from
            healthy donors
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6123416)
  AUTHORS   Lin,H., Littmann,E., Kohout,C. and Pamer,E.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2021) Duchossois Family Institute, University of
            Chicago, 900 E 57th St., Chicago, IL 60637, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAJFDX000000000.1.
            The Clostridium pacaense whole genome shotgun (WGS) project has the
            project accession NZ_JAJFDX000000000.  This version of the project
            (01) has the accession number NZ_JAJFDX010000000, and consists of
            sequences JAJFDX010000001-JAJFDX010000049.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2021
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_020709355.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:38:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,631
            CDSs (total)                      :: 5,568
            Genes (coding)                    :: 5,476
            CDSs (with protein)               :: 5,476
            Genes (RNA)                       :: 63
            rRNAs                             :: 2 (23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 8 of 92
            Pseudo Genes (incomplete)         :: 84 of 92
            Pseudo Genes (internal stop)      :: 12 of 92
            Pseudo Genes (multiple problems)  :: 12 of 92
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6123416
                     /organism="Clostridium pacaense"
                     /mol_type="genomic DNA"
                     /strain="DFI.6.51A"
                     /isolation_source="fecal sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1917870"
                     /geo_loc_name="USA: Chicago"
WGS         JAJFDX010000001-JAJFDX010000049
WGS_SCAFLD  NZ_JAJFDX010000001-NZ_JAJFDX010000049
//
LOCUS       NZ_JAYLWC010000000   4303647 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Clostridioides difficile strain CD76ELNT, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAYLWC000000000
VERSION     NZ_JAYLWC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39286544
            Assembly: GCF_037448895.1
KEYWORDS    WGS; RefSeq.
SOURCE      Clostridioides difficile (Clostridium difficile)
  ORGANISM  Clostridioides difficile
            Bacteria; Bacillati; Bacillota; Clostridia; Peptostreptococcales;
            Peptostreptococcaceae; Clostridioides.
REFERENCE   1  (bases 1 to 4303647)
  AUTHORS   Tanja,N., Khadwal,A., Singh,N., Singh,I. and Mittal,A.
  TITLE     Genomic characterization of Clostridioides difficile associated
            with Hematopoietic Stem Cell Transplant recipients in a tertiary
            care referral center, Chandigarh, India
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4303647)
  AUTHORS   Taneja,N. and Khadwal,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JAN-2024) Medical Microbiology, Postgraduate
            Institute of Medical Education and Research, Sector 12, Madhya
            Marg, Chandigarh, Chandigarh 160012, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAYLWC000000000.1.
            The Clostridioides difficile whole genome shotgun (WGS) project has
            the project accession NZ_JAYLWC000000000.  This version of the
            project (01) has the accession number NZ_JAYLWC010000000, and
            consists of sequences JAYLWC010000001-JAYLWC010000065.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 05-JAN-2024
            Assembly Method        :: SPAdes v. 3.15.5--h95f258a_1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037448895.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:23:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,054
            CDSs (total)                      :: 3,995
            Genes (coding)                    :: 3,959
            CDSs (with protein)               :: 3,959
            Genes (RNA)                       :: 59
            rRNAs                             :: 4, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 23S)
            partial rRNAs                     :: 1, 2 (5S, 16S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 6 of 36
            Pseudo Genes (incomplete)         :: 30 of 36
            Pseudo Genes (internal stop)      :: 8 of 36
            Pseudo Genes (multiple problems)  :: 6 of 36
            CRISPR Arrays                     :: 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4303647
                     /organism="Clostridioides difficile"
                     /mol_type="genomic DNA"
                     /strain="CD76ELNT"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:1496"
                     /geo_loc_name="India"
                     /lat_lon="30.73629 N 76.7884 E"
                     /collection_date="2020"
                     /collected_by="Post Graduate Institute of Medical
                     Education & Research Chandigarh - India"
WGS         JAYLWC010000001-JAYLWC010000065
WGS_SCAFLD  NZ_JAYLWC010000001-NZ_JAYLWC010000065
//
LOCUS       NZ_JABFUY010000000   4936838 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Clostridium saccharobutylicum strain DJ250, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JABFUY000000000
VERSION     NZ_JABFUY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09070637
            Assembly: GCF_013149595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Clostridium saccharobutylicum
  ORGANISM  Clostridium saccharobutylicum
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium.
REFERENCE   1  (bases 1 to 4936838)
  AUTHORS   Liew,F.E., Nogle,R., Abdalla,T., Rasor,B.J., Canter,C.,
            Jensen,R.O., Wang,L., Strutz,J., Chirania,P., De Tissera,S.,
            Mueller,A.P., Ruan,Z., Gao,A., Tran,L., Engle,N.L., Bromley,J.C.,
            Daniell,J., Conrado,R., Tschaplinski,T.J., Giannone,R.J.,
            Hettich,R.L., Karim,A.S., Simpson,S.D., Brown,S.D., Leang,C.,
            Jewett,M.C. and Kopke,M.
  TITLE     Carbon-negative production of acetone and isopropanol by gas
            fermentation at industrial pilot scale
  JOURNAL   Nat Biotechnol 40 (3), 335-344 (2022)
   PUBMED   35190685
REFERENCE   2  (bases 1 to 4936838)
  AUTHORS   Brown,S., Huntemann,M., Clum,A., Spunde,A., Palaniappan,K.,
            Ritter,S., Mikhailova,N., Chen,I.-M., Stamatis,D., Reddy,T.,
            O'Malley,R., Daum,C., Shapiro,N., Ivanova,N., Kyrpides,N. and
            Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAY-2020) Prokaryote Super Program, DOE Joint Genome
            Institute, 1 Cyclotron Road, Mail Stop: 91R0183, Berkeley, CA
            94720, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JABFUY000000000.1.
            The Clostridium saccharobutylicum whole genome shotgun (WGS)
            project has the project accession NZ_JABFUY000000000.  This version
            of the project (01) has the accession number NZ_JABFUY010000000,
            and consists of sequence JABFUY010000001.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: HGAP v. 2.3.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 161.0x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013149595.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:40:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,426
            CDSs (total)                      :: 4,288
            Genes (coding)                    :: 4,192
            CDSs (with protein)               :: 4,192
            Genes (RNA)                       :: 138
            rRNAs                             :: 14, 13, 13 (5S, 16S, 23S)
            complete rRNAs                    :: 14, 13, 13 (5S, 16S, 23S)
            tRNAs                             :: 95
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 96
            CDSs (without protein)            :: 96
            Pseudo Genes (ambiguous residues) :: 0 of 96
            Pseudo Genes (frameshifted)       :: 42 of 96
            Pseudo Genes (incomplete)         :: 59 of 96
            Pseudo Genes (internal stop)      :: 26 of 96
            Pseudo Genes (multiple problems)  :: 27 of 96
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4936838
                     /organism="Clostridium saccharobutylicum"
                     /mol_type="genomic DNA"
                     /strain="DJ250"
                     /db_xref="taxon:169679"
WGS         JABFUY010000001
WGS_SCAFLD  NZ_JABFUY010000001
//
LOCUS       NZ_JABANX010000000   4074299 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Clostridium acetobutylicum strain DJ103, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JABANX000000000
VERSION     NZ_JABANX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14591201
            Assembly: GCF_014231285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Clostridium acetobutylicum
  ORGANISM  Clostridium acetobutylicum
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium.
REFERENCE   1  (bases 1 to 4074299)
  AUTHORS   Liew,F.E., Nogle,R., Abdalla,T., Rasor,B.J., Canter,C.,
            Jensen,R.O., Wang,L., Strutz,J., Chirania,P., De Tissera,S.,
            Mueller,A.P., Ruan,Z., Gao,A., Tran,L., Engle,N.L., Bromley,J.C.,
            Daniell,J., Conrado,R., Tschaplinski,T.J., Giannone,R.J.,
            Hettich,R.L., Karim,A.S., Simpson,S.D., Brown,S.D., Leang,C.,
            Jewett,M.C. and Kopke,M.
  TITLE     Carbon-negative production of acetone and isopropanol by gas
            fermentation at industrial pilot scale
  JOURNAL   Nat Biotechnol 40 (3), 335-344 (2022)
   PUBMED   35190685
REFERENCE   2  (bases 1 to 4074299)
  AUTHORS   Brown,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2020) Computational Biology, LanzaTech Inc, 8045
            Lamon Avenue, Suite 400, Skokie, IL 60077, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JABANX000000000.1.
            The Clostridium acetobutylicum whole genome shotgun (WGS) project
            has the project accession NZ_JABANX000000000.  This version of the
            project (01) has the accession number NZ_JABANX010000000, and
            consists of sequences JABANX010000001-JABANX010000038.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Dr. Steven Brown, 8045 Lamon
            Avenue, Skokie, Illinois, 60077, USA.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 74.23914249x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_014231285.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:26:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,951
            CDSs (total)                      :: 3,893
            Genes (coding)                    :: 3,854
            CDSs (with protein)               :: 3,854
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2, 1 (5S, 16S)
            tRNAs                             :: 50
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 6 of 39
            Pseudo Genes (incomplete)         :: 37 of 39
            Pseudo Genes (internal stop)      :: 4 of 39
            Pseudo Genes (multiple problems)  :: 8 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4074299
                     /organism="Clostridium acetobutylicum"
                     /mol_type="genomic DNA"
                     /strain="DJ103"
                     /isolation_source="Industrial ABE fermentation"
                     /db_xref="taxon:1488"
                     /collection_date="2007"
                     /collected_by="LanzaTech Inc"
WGS         JABANX010000001-JABANX010000038
WGS_SCAFLD  NZ_JABANX010000001-NZ_JABANX010000038
//
LOCUS       NZ_JAYLWF010000000   3996796 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Clostridioides difficile strain CD31ELNT, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAYLWF000000000
VERSION     NZ_JAYLWF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39286543
            Assembly: GCF_037448875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Clostridioides difficile (Clostridium difficile)
  ORGANISM  Clostridioides difficile
            Bacteria; Bacillati; Bacillota; Clostridia; Peptostreptococcales;
            Peptostreptococcaceae; Clostridioides.
REFERENCE   1  (bases 1 to 3996796)
  AUTHORS   Tanja,N., Khadwal,A., Singh,N., Singh,I. and Mittal,A.
  TITLE     Genomic characterization of Clostridioides difficile associated
            with Hematopoietic Stem Cell Transplant recipients in a tertiary
            care referral center, Chandigarh, India
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3996796)
  AUTHORS   Taneja,N. and Khadwal,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JAN-2024) Medical Microbiology, Postgraduate
            Institute of Medical Education and Research, Sector 12, Madhya
            Marg, Chandigarh, Chandigarh 160012, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAYLWF000000000.1.
            The Clostridioides difficile whole genome shotgun (WGS) project has
            the project accession NZ_JAYLWF000000000.  This version of the
            project (01) has the accession number NZ_JAYLWF010000000, and
            consists of sequences JAYLWF010000001-JAYLWF010000053.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 05-JAN-2024
            Assembly Method        :: SPAdes v. 3.15.5--h95f258a_1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037448875.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:24:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,668
            CDSs (total)                      :: 3,613
            Genes (coding)                    :: 3,584
            CDSs (with protein)               :: 3,584
            Genes (RNA)                       :: 55
            rRNAs                             :: 3, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 3, 2 (16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 7 of 29
            Pseudo Genes (incomplete)         :: 24 of 29
            Pseudo Genes (internal stop)      :: 7 of 29
            Pseudo Genes (multiple problems)  :: 8 of 29
            CRISPR Arrays                     :: 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3996796
                     /organism="Clostridioides difficile"
                     /mol_type="genomic DNA"
                     /strain="CD31ELNT"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:1496"
                     /geo_loc_name="India"
                     /lat_lon="30.73629 N 76.7884 E"
                     /collection_date="2020"
                     /collected_by="Post Graduate Institute of Medical
                     Education & Research Chandigarh - India"
WGS         JAYLWF010000001-JAYLWF010000053
WGS_SCAFLD  NZ_JAYLWF010000001-NZ_JAYLWF010000053
//
LOCUS       NZ_JABFUZ010000000   4169348 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Clostridium acetobutylicum strain DJ313, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JABFUZ000000000
VERSION     NZ_JABFUZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09065116
            Assembly: GCF_013149385.1
KEYWORDS    WGS; RefSeq.
SOURCE      Clostridium acetobutylicum
  ORGANISM  Clostridium acetobutylicum
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium.
REFERENCE   1  (bases 1 to 4169348)
  AUTHORS   Liew,F.E., Nogle,R., Abdalla,T., Rasor,B.J., Canter,C.,
            Jensen,R.O., Wang,L., Strutz,J., Chirania,P., De Tissera,S.,
            Mueller,A.P., Ruan,Z., Gao,A., Tran,L., Engle,N.L., Bromley,J.C.,
            Daniell,J., Conrado,R., Tschaplinski,T.J., Giannone,R.J.,
            Hettich,R.L., Karim,A.S., Simpson,S.D., Brown,S.D., Leang,C.,
            Jewett,M.C. and Kopke,M.
  TITLE     Carbon-negative production of acetone and isopropanol by gas
            fermentation at industrial pilot scale
  JOURNAL   Nat Biotechnol 40 (3), 335-344 (2022)
   PUBMED   35190685
REFERENCE   2  (bases 1 to 4169348)
  AUTHORS   Brown,S., Huntemann,M., Clum,A., Spunde,A., Palaniappan,K.,
            Ritter,S., Mikhailova,N., Chen,I.-M., Stamatis,D., Reddy,T.,
            O'Malley,R., Daum,C., Shapiro,N., Ivanova,N., Kyrpides,N. and
            Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAY-2020) Prokaryote Super Program, DOE Joint Genome
            Institute, 1 Cyclotron Road, Mail Stop: 91R0183, Berkeley, CA
            94720, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JABFUZ000000000.1.
            The Clostridium acetobutylicum whole genome shotgun (WGS) project
            has the project accession NZ_JABFUZ000000000.  This version of the
            project (01) has the accession number NZ_JABFUZ010000000, and
            consists of sequences JABFUZ010000001-JABFUZ010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: HGAP v. smrtanalysis 2.3.0_p5, HGAP v. 3
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 170.0x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013149385.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:28:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,060
            CDSs (total)                      :: 3,940
            Genes (coding)                    :: 3,888
            CDSs (with protein)               :: 3,888
            Genes (RNA)                       :: 120
            rRNAs                             :: 11, 12, 12 (5S, 16S, 23S)
            complete rRNAs                    :: 11, 11, 11 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 23 of 52
            Pseudo Genes (incomplete)         :: 32 of 52
            Pseudo Genes (internal stop)      :: 5 of 52
            Pseudo Genes (multiple problems)  :: 8 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4169348
                     /organism="Clostridium acetobutylicum"
                     /mol_type="genomic DNA"
                     /strain="DJ313"
                     /db_xref="taxon:1488"
WGS         JABFUZ010000001-JABFUZ010000004
WGS_SCAFLD  NZ_JABFUZ010000001-NZ_JABFUZ010000004
//
LOCUS       NZ_JABAJG010000000   6013579 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Clostridium beijerinckii strain DJ266, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JABAJG000000000
VERSION     NZ_JABAJG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14591193
            Assembly: GCF_014231165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Clostridium beijerinckii
  ORGANISM  Clostridium beijerinckii
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium.
REFERENCE   1  (bases 1 to 6013579)
  AUTHORS   Liew,F.E., Nogle,R., Abdalla,T., Rasor,B.J., Canter,C.,
            Jensen,R.O., Wang,L., Strutz,J., Chirania,P., De Tissera,S.,
            Mueller,A.P., Ruan,Z., Gao,A., Tran,L., Engle,N.L., Bromley,J.C.,
            Daniell,J., Conrado,R., Tschaplinski,T.J., Giannone,R.J.,
            Hettich,R.L., Karim,A.S., Simpson,S.D., Brown,S.D., Leang,C.,
            Jewett,M.C. and Kopke,M.
  TITLE     Carbon-negative production of acetone and isopropanol by gas
            fermentation at industrial pilot scale
  JOURNAL   Nat Biotechnol 40 (3), 335-344 (2022)
   PUBMED   35190685
REFERENCE   2  (bases 1 to 6013579)
  AUTHORS   Brown,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2020) Computational Biology, LanzaTech Inc, 8045
            Lamon Avenue, Suite 400, Skokie, IL 60077, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JABAJG000000000.1.
            The Clostridium beijerinckii whole genome shotgun (WGS) project has
            the project accession NZ_JABAJG000000000.  This version of the
            project (01) has the accession number NZ_JABAJG010000000, and
            consists of sequences JABAJG010000001-JABAJG010000068.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Dr. Steven Brown, 8045 Lamon
            Avenue, Skokie, Illinois, 60077, USA.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 141.2213047x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_014231165.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:36:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,363
            CDSs (total)                      :: 5,309
            Genes (coding)                    :: 5,244
            CDSs (with protein)               :: 5,244
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 20 of 65
            Pseudo Genes (incomplete)         :: 44 of 65
            Pseudo Genes (internal stop)      :: 12 of 65
            Pseudo Genes (multiple problems)  :: 9 of 65
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6013579
                     /organism="Clostridium beijerinckii"
                     /mol_type="genomic DNA"
                     /strain="DJ266"
                     /isolation_source="Industrial ABE fermentation"
                     /db_xref="taxon:1520"
                     /collection_date="2007"
                     /collected_by="LanzaTech Inc"
WGS         JABAJG010000001-JABAJG010000068
WGS_SCAFLD  NZ_JABAJG010000001-NZ_JABAJG010000068
//
LOCUS       NZ_NKSS01000000      3806626 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Clostridium botulinum strain BrDuraA, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NKSS00000000
VERSION     NZ_NKSS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07185497
            Assembly: GCF_055273735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Clostridium botulinum
  ORGANISM  Clostridium botulinum
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Clostridiaceae; Clostridium; Clostridium botulinum group.
REFERENCE   1  (bases 1 to 3806626)
  AUTHORS   Williamson,C.
  TITLE     WGS of BoNT-producing Clostridia
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3806626)
  AUTHORS   Williamson,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-SEP-2025) Pathogen and Microbiome Institute, Northern
            Arizona University, 1298 S Knoles Drive, Flagstaff, AZ 86011-4073,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NKSS00000000.1.
            The Clostridium botulinum whole genome shotgun (WGS) project has
            the project accession NZ_NKSS00000000.  This version of the project
            (01) has the accession number NZ_NKSS01000000, and consists of
            sequence NKSS01000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2025
            Assembly Method        :: UniCycler v. 0.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1300x
            Sequencing Technology  :: Illumina MiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_055273735.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:32:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,559
            CDSs (total)                      :: 3,446
            Genes (coding)                    :: 3,398
            CDSs (with protein)               :: 3,398
            Genes (RNA)                       :: 113
            rRNAs                             :: 9, 9, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 9 (5S, 16S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 48
            CDSs (without protein)            :: 48
            Pseudo Genes (ambiguous residues) :: 0 of 48
            Pseudo Genes (frameshifted)       :: 17 of 48
            Pseudo Genes (incomplete)         :: 32 of 48
            Pseudo Genes (internal stop)      :: 6 of 48
            Pseudo Genes (multiple problems)  :: 7 of 48
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3806626
                     /organism="Clostridium botulinum"
                     /mol_type="genomic DNA"
                     /strain="BrDuraA"
                     /serotype="A"
                     /isolation_source="outbreak"
                     /db_xref="taxon:1491"
                     /geo_loc_name="Argentina"
                     /collection_date="1987"
                     /collected_by="Universidad Nacional de Cuyo"
                     /subgroup="Group I"
WGS         NKSS01000001
WGS_SCAFLD  NZ_CM143877
//
LOCUS       NZ_JAYLWE010000000   4211636 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Clostridioides difficile strain CDS2ELNT, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAYLWE000000000
VERSION     NZ_JAYLWE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39286546
            Assembly: GCF_037448855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Clostridioides difficile (Clostridium difficile)
  ORGANISM  Clostridioides difficile
            Bacteria; Bacillati; Bacillota; Clostridia; Peptostreptococcales;
            Peptostreptococcaceae; Clostridioides.
REFERENCE   1  (bases 1 to 4211636)
  AUTHORS   Tanja,N., Khadwal,A., Singh,N., Singh,I. and Mittal,A.
  TITLE     Genomic characterization of Clostridioides difficile associated
            with Hematopoietic Stem Cell Transplant recipients in a tertiary
            care referral center, Chandigarh, India
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4211636)
  AUTHORS   Taneja,N. and Khadwal,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JAN-2024) Medical Microbiology, Postgraduate
            Institute of Medical Education and Research, Sector 12, Madhya
            Marg, Chandigarh, Chandigarh 160012, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAYLWE000000000.1.
            The Clostridioides difficile whole genome shotgun (WGS) project has
            the project accession NZ_JAYLWE000000000.  This version of the
            project (01) has the accession number NZ_JAYLWE010000000, and
            consists of sequences JAYLWE010000001-JAYLWE010000092.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 05-JAN-2024
            Assembly Method        :: SPAdes v. 3.15.5--h95f258a_1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037448855.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:25:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,965
            CDSs (total)                      :: 3,901
            Genes (coding)                    :: 3,852
            CDSs (with protein)               :: 3,852
            Genes (RNA)                       :: 64
            rRNAs                             :: 4, 2, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 1, 2, 5 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 8 of 49
            Pseudo Genes (incomplete)         :: 42 of 49
            Pseudo Genes (internal stop)      :: 7 of 49
            Pseudo Genes (multiple problems)  :: 6 of 49
            CRISPR Arrays                     :: 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4211636
                     /organism="Clostridioides difficile"
                     /mol_type="genomic DNA"
                     /strain="CDS2ELNT"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:1496"
                     /geo_loc_name="India"
                     /lat_lon="30.73629 N 76.7884 E"
                     /collection_date="2020"
                     /collected_by="Post Graduate Institute of Medical
                     Education & Research Chandigarh - India"
WGS         JAYLWE010000001-JAYLWE010000092
WGS_SCAFLD  NZ_JAYLWE010000001-NZ_JAYLWE010000092
//
LOCUS       NZ_MIOH01000000      2444094 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Corynebacterium diphtheriae strain ST378-KZN-2015-45465, whole
            genome shotgun sequencing project.
ACCESSION   NZ_MIOH00000000
VERSION     NZ_MIOH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05729424
            Assembly: GCF_001875945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium diphtheriae
  ORGANISM  Corynebacterium diphtheriae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2444094)
  AUTHORS   du Plessis,M., Wolter,N., Allam,M., de Gouveia,L., Moosa,F.,
            Ntshoe,G., Blumberg,L., Cohen,C., Smith,M., Mutevedzi,P.,
            Thomas,J., Horne,V., Moodley,P., Archary,M., Mahabeer,Y.,
            Mahomed,S., Kuhn,W., Mlisana,K., McCarthy,K. and von Gottberg,A.
  TITLE     Molecular Characterization of Corynebacterium diphtheriae Outbreak
            Isolates, South Africa, March-June 2015
  JOURNAL   Emerg Infect Dis 23 (8), 1308-1315 (2017)
   PUBMED   28726616
REFERENCE   2  (bases 1 to 2444094)
  AUTHORS   Allam,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-SEP-2016) Sequencing Core Facility, National
            Institute for Communicable Diseases, 1 Modderfontein Road,
            Johannesburg, Gauteng 2131, South Africa
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            MIOH00000000.1.
            The Corynebacterium diphtheriae whole genome shotgun (WGS) project
            has the project accession NZ_MIOH00000000.  This version of the
            project (01) has the accession number NZ_MIOH01000000, and consists
            of sequences MIOH01000001-MIOH01000058.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_001875945.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:19:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,391
            CDSs (total)                      :: 2,334
            Genes (coding)                    :: 2,260
            CDSs (with protein)               :: 2,260
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 74
            CDSs (without protein)            :: 74
            Pseudo Genes (ambiguous residues) :: 0 of 74
            Pseudo Genes (frameshifted)       :: 49 of 74
            Pseudo Genes (incomplete)         :: 42 of 74
            Pseudo Genes (internal stop)      :: 11 of 74
            Pseudo Genes (multiple problems)  :: 24 of 74
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2444094
                     /organism="Corynebacterium diphtheriae"
                     /mol_type="genomic DNA"
                     /strain="ST378-KZN-2015-45465"
                     /isolation_source="throat swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:1717"
                     /geo_loc_name="South Africa: KwaZulu-Natal"
                     /lat_lon="28.5306 S 30.8958 E"
                     /collection_date="2015"
                     /collected_by="National Institute for Communicable
                     Diseases, South Africa"
                     /note="sequence type 378"
WGS         MIOH01000001-MIOH01000058
WGS_SCAFLD  NZ_MIOH01000001-NZ_MIOH01000058
//
LOCUS       NZ_JBAHUW010000000   2249962 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Corynebacterium marquesiae strain PCR 3, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBAHUW000000000
VERSION     NZ_JBAHUW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39854113
            Assembly: GCF_037465525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium marquesiae
  ORGANISM  Corynebacterium marquesiae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2249962)
  AUTHORS   Naqvi,M.
  TITLE     Whole genome sequencing and characterization of Corynebacterium
            isolated from the ocular surface of dry eye disease sufferers
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2249962)
  AUTHORS   Naqvi,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-FEB-2024) Pharmacy, OsloMet, Pilestredet 46, Oslo
            0167, Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAHUW000000000.1.
            The Corynebacterium marquesiae whole genome shotgun (WGS) project
            has the project accession NZ_JBAHUW000000000.  This version of the
            project (01) has the accession number NZ_JBAHUW010000000, and
            consists of sequences JBAHUW010000001-JBAHUW010000068.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 143x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037465525.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:28:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,201
            CDSs (total)                      :: 2,143
            Genes (coding)                    :: 2,103
            CDSs (with protein)               :: 2,103
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 40
            CDSs (without protein)            :: 40
            Pseudo Genes (ambiguous residues) :: 0 of 40
            Pseudo Genes (frameshifted)       :: 17 of 40
            Pseudo Genes (incomplete)         :: 25 of 40
            Pseudo Genes (internal stop)      :: 7 of 40
            Pseudo Genes (multiple problems)  :: 8 of 40
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2249962
                     /organism="Corynebacterium marquesiae"
                     /mol_type="genomic DNA"
                     /strain="PCR 3"
                     /isolation_source="Tear sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:2913503"
                     /geo_loc_name="Norway: Oslo"
                     /collection_date="2022-10"
                     /collected_by="Oslo Metropolitan University"
WGS         JBAHUW010000001-JBAHUW010000068
WGS_SCAFLD  NZ_JBAHUW010000001-NZ_JBAHUW010000068
//
LOCUS       NZ_JBAHUU010000000   2460940 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Corynebacterium propinquum strain PCR11, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBAHUU000000000
VERSION     NZ_JBAHUU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39854111
            Assembly: GCF_037465565.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium propinquum
  ORGANISM  Corynebacterium propinquum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2460940)
  AUTHORS   Naqvi,M.
  TITLE     Whole genome sequencing and characterization of Corynebacterium
            isolated from the ocular surface of dry eye disease sufferers
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2460940)
  AUTHORS   Naqvi,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-FEB-2024) Pharmacy, OsloMet, Pilestredet 46, Oslo
            0167, Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAHUU000000000.1.
            The Corynebacterium propinquum whole genome shotgun (WGS) project
            has the project accession NZ_JBAHUU000000000.  This version of the
            project (01) has the accession number NZ_JBAHUU010000000, and
            consists of sequences JBAHUU010000001-JBAHUU010000030.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 138x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037465565.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:30:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,231
            CDSs (total)                      :: 2,179
            Genes (coding)                    :: 2,126
            CDSs (with protein)               :: 2,126
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 53
            CDSs (without protein)            :: 53
            Pseudo Genes (ambiguous residues) :: 0 of 53
            Pseudo Genes (frameshifted)       :: 23 of 53
            Pseudo Genes (incomplete)         :: 34 of 53
            Pseudo Genes (internal stop)      :: 3 of 53
            Pseudo Genes (multiple problems)  :: 7 of 53
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2460940
                     /organism="Corynebacterium propinquum"
                     /mol_type="genomic DNA"
                     /strain="PCR11"
                     /isolation_source="Tear sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:43769"
                     /geo_loc_name="Norway: Oslo"
                     /collection_date="2022-10"
                     /collected_by="Oslo Metropolitan University"
WGS         JBAHUU010000001-JBAHUU010000030
WGS_SCAFLD  NZ_JBAHUU010000001-NZ_JBAHUU010000030
//
LOCUS       NZ_JBAHVE010000000   2429208 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Corynebacterium accolens strain PCR23, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBAHVE000000000
VERSION     NZ_JBAHVE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39854121
            Assembly: GCF_037465125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium accolens
  ORGANISM  Corynebacterium accolens
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2429208)
  AUTHORS   Naqvi,M.
  TITLE     Whole genome sequencing and characterization of Corynebacterium
            isolated from the ocular surface of dry eye disease sufferers
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2429208)
  AUTHORS   Naqvi,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-FEB-2024) Pharmacy, OsloMet, Pilestredet 46, Oslo
            0167, Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAHVE000000000.1.
            The Corynebacterium accolens whole genome shotgun (WGS) project has
            the project accession NZ_JBAHVE000000000.  This version of the
            project (01) has the accession number NZ_JBAHVE010000000, and
            consists of sequences JBAHVE010000001-JBAHVE010000030.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 139x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037465125.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:28:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,342
            CDSs (total)                      :: 2,285
            Genes (coding)                    :: 2,224
            CDSs (with protein)               :: 2,224
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 61
            CDSs (without protein)            :: 61
            Pseudo Genes (ambiguous residues) :: 0 of 61
            Pseudo Genes (frameshifted)       :: 35 of 61
            Pseudo Genes (incomplete)         :: 32 of 61
            Pseudo Genes (internal stop)      :: 8 of 61
            Pseudo Genes (multiple problems)  :: 14 of 61
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2429208
                     /organism="Corynebacterium accolens"
                     /mol_type="genomic DNA"
                     /strain="PCR23"
                     /isolation_source="Tear sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:38284"
                     /geo_loc_name="Norway: Oslo"
                     /collection_date="2022-10"
                     /collected_by="Oslo Metropolitan University"
WGS         JBAHVE010000001-JBAHVE010000030
WGS_SCAFLD  NZ_JBAHVE010000001-NZ_JBAHVE010000030
//
LOCUS       NZ_JBAHVF010000000   2520787 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Corynebacterium accolens strain PCR31, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBAHVF000000000
VERSION     NZ_JBAHVF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39854122
            Assembly: GCF_037465075.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium accolens
  ORGANISM  Corynebacterium accolens
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2520787)
  AUTHORS   Naqvi,M.
  TITLE     Whole genome sequencing and characterization of Corynebacterium
            isolated from the ocular surface of dry eye disease sufferers
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2520787)
  AUTHORS   Naqvi,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-FEB-2024) Pharmacy, OsloMet, Pilestredet 46, Oslo
            0167, Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAHVF000000000.1.
            The Corynebacterium accolens whole genome shotgun (WGS) project has
            the project accession NZ_JBAHVF000000000.  This version of the
            project (01) has the accession number NZ_JBAHVF010000000, and
            consists of sequences JBAHVF010000001-JBAHVF010000044.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 138x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037465075.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:30:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,426
            CDSs (total)                      :: 2,369
            Genes (coding)                    :: 2,318
            CDSs (with protein)               :: 2,318
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 24 of 51
            Pseudo Genes (incomplete)         :: 33 of 51
            Pseudo Genes (internal stop)      :: 6 of 51
            Pseudo Genes (multiple problems)  :: 10 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2520787
                     /organism="Corynebacterium accolens"
                     /mol_type="genomic DNA"
                     /strain="PCR31"
                     /isolation_source="Tear sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:38284"
                     /geo_loc_name="Norway: Oslo"
                     /collection_date="2022-10"
                     /collected_by="Oslo Metropolitan University"
WGS         JBAHVF010000001-JBAHVF010000044
WGS_SCAFLD  NZ_JBAHVF010000001-NZ_JBAHVF010000044
//
LOCUS       NZ_JBAHVB010000000   2520709 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Corynebacterium accolens strain PCR19, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBAHVB000000000
VERSION     NZ_JBAHVB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39854118
            Assembly: GCF_037465365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium accolens
  ORGANISM  Corynebacterium accolens
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2520709)
  AUTHORS   Naqvi,M.
  TITLE     Whole genome sequencing and characterization of Corynebacterium
            isolated from the ocular surface of dry eye disease sufferers
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2520709)
  AUTHORS   Naqvi,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-FEB-2024) Pharmacy, OsloMet, Pilestredet 46, Oslo
            0167, Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAHVB000000000.1.
            The Corynebacterium accolens whole genome shotgun (WGS) project has
            the project accession NZ_JBAHVB000000000.  This version of the
            project (01) has the accession number NZ_JBAHVB010000000, and
            consists of sequences JBAHVB010000001-JBAHVB010000044.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 143x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037465365.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:28:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,426
            CDSs (total)                      :: 2,369
            Genes (coding)                    :: 2,316
            CDSs (with protein)               :: 2,316
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 53
            CDSs (without protein)            :: 53
            Pseudo Genes (ambiguous residues) :: 0 of 53
            Pseudo Genes (frameshifted)       :: 25 of 53
            Pseudo Genes (incomplete)         :: 33 of 53
            Pseudo Genes (internal stop)      :: 7 of 53
            Pseudo Genes (multiple problems)  :: 10 of 53
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2520709
                     /organism="Corynebacterium accolens"
                     /mol_type="genomic DNA"
                     /strain="PCR19"
                     /isolation_source="Tear sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:38284"
                     /geo_loc_name="Norway: Oslo"
                     /collection_date="2022-10"
                     /collected_by="Oslo Metropolitan University"
WGS         JBAHVB010000001-JBAHVB010000044
WGS_SCAFLD  NZ_JBAHVB010000001-NZ_JBAHVB010000044
//
LOCUS       NZ_JBAHUT010000000   2461098 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Corynebacterium propinquum strain PCR 8, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBAHUT000000000
VERSION     NZ_JBAHUT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39854110
            Assembly: GCF_037465635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium propinquum
  ORGANISM  Corynebacterium propinquum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2461098)
  AUTHORS   Naqvi,M.
  TITLE     Whole genome sequencing and characterization of Corynebacterium
            isolated from the ocular surface of dry eye disease sufferers
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2461098)
  AUTHORS   Naqvi,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-FEB-2024) Pharmacy, OsloMet, Pilestredet 46, Oslo
            0167, Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAHUT000000000.1.
            The Corynebacterium propinquum whole genome shotgun (WGS) project
            has the project accession NZ_JBAHUT000000000.  This version of the
            project (01) has the accession number NZ_JBAHUT010000000, and
            consists of sequences JBAHUT010000001-JBAHUT010000029.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 137x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037465635.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:26:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,229
            CDSs (total)                      :: 2,177
            Genes (coding)                    :: 2,125
            CDSs (with protein)               :: 2,125
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 22 of 52
            Pseudo Genes (incomplete)         :: 34 of 52
            Pseudo Genes (internal stop)      :: 3 of 52
            Pseudo Genes (multiple problems)  :: 7 of 52
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2461098
                     /organism="Corynebacterium propinquum"
                     /mol_type="genomic DNA"
                     /strain="PCR 8"
                     /isolation_source="Tear sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:43769"
                     /geo_loc_name="Norway: Oslo"
                     /collection_date="2022-10"
                     /collected_by="Oslo Metropolitan University"
WGS         JBAHUT010000001-JBAHUT010000029
WGS_SCAFLD  NZ_JBAHUT010000001-NZ_JBAHUT010000029
//
LOCUS       NZ_JBAHVD010000000   2429143 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Corynebacterium accolens strain PCR22, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBAHVD000000000
VERSION     NZ_JBAHVD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39854120
            Assembly: GCF_037465265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium accolens
  ORGANISM  Corynebacterium accolens
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2429143)
  AUTHORS   Naqvi,M.
  TITLE     Whole genome sequencing and characterization of Corynebacterium
            isolated from the ocular surface of dry eye disease sufferers
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2429143)
  AUTHORS   Naqvi,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-FEB-2024) Pharmacy, OsloMet, Pilestredet 46, Oslo
            0167, Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAHVD000000000.1.
            The Corynebacterium accolens whole genome shotgun (WGS) project has
            the project accession NZ_JBAHVD000000000.  This version of the
            project (01) has the accession number NZ_JBAHVD010000000, and
            consists of sequences JBAHVD010000001-JBAHVD010000028.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 140x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037465265.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:27:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,347
            CDSs (total)                      :: 2,289
            Genes (coding)                    :: 2,226
            CDSs (with protein)               :: 2,226
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 35 of 63
            Pseudo Genes (incomplete)         :: 35 of 63
            Pseudo Genes (internal stop)      :: 8 of 63
            Pseudo Genes (multiple problems)  :: 15 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2429143
                     /organism="Corynebacterium accolens"
                     /mol_type="genomic DNA"
                     /strain="PCR22"
                     /isolation_source="Tear sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:38284"
                     /geo_loc_name="Norway: Oslo"
                     /collection_date="2022-10"
                     /collected_by="Oslo Metropolitan University"
WGS         JBAHVD010000001-JBAHVD010000028
WGS_SCAFLD  NZ_JBAHVD010000001-NZ_JBAHVD010000028
//
LOCUS       NZ_JABTDC010000000   2792374 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Enterococcus faecium strain CB_1208, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JABTDC000000000
VERSION     NZ_JABTDC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14000052
            Assembly: GCF_013266475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecium
  ORGANISM  Enterococcus faecium
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2792374)
  AUTHORS   Zaheer,R., Cook,S.R., Barbieri,R., Goji,N., Cameron,A., Petkau,A.,
            Polo,R.O., Tymensen,L., Stamm,C., Song,J., Hannon,S., Jones,T.,
            Church,D., Booker,C.W., Amoako,K., Van Domselaar,G., Read,R.R. and
            McAllister,T.A.
  TITLE     Surveillance of Enterococcus spp. reveals distinct species and
            antimicrobial resistance diversity across a One-Health continuum
  JOURNAL   Sci Rep 10 (1), 3937 (2020)
   PUBMED   32127598
  REMARK    Erratum:[Sci Rep. 2020 Aug 4;10(1):13401. doi:
            10.1038/s41598-020-69044-5. PMID: 32747642]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2792374)
  AUTHORS   Zaheer,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-JUN-2020) Agriculture and Agri-Food Canada,
            Lethbridge Research and Development Centre, 5403 1st Ave S,
            Lethbridge, Alberta T1J 4P4, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JABTDC000000000.1.
            The Enterococcus faecium whole genome shotgun (WGS) project has the
            project accession NZ_JABTDC000000000.  This version of the project
            (01) has the accession number NZ_JABTDC010000000, and consists of
            sequences JABTDC010000001-JABTDC010000150.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 44.96x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013266475.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:34:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,752
            CDSs (total)                      :: 2,682
            Genes (coding)                    :: 2,577
            CDSs (with protein)               :: 2,577
            Genes (RNA)                       :: 70
            rRNAs                             :: 5, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 1 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 32 of 105
            Pseudo Genes (incomplete)         :: 63 of 105
            Pseudo Genes (internal stop)      :: 21 of 105
            Pseudo Genes (multiple problems)  :: 10 of 105
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2792374
                     /organism="Enterococcus faecium"
                     /mol_type="genomic DNA"
                     /strain="CB_1208"
                     /isolation_source="Catch basin"
                     /db_xref="taxon:1352"
                     /geo_loc_name="Canada: Alberta"
                     /collection_date="2015"
WGS         JABTDC010000001-JABTDC010000150
WGS_SCAFLD  NZ_JABTDC010000001-NZ_JABTDC010000150
//
LOCUS       NZ_JBAHUS010000000   2460663 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Corynebacterium propinquum strain PCR1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBAHUS000000000
VERSION     NZ_JBAHUS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39854109
            Assembly: GCF_037465575.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium propinquum
  ORGANISM  Corynebacterium propinquum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2460663)
  AUTHORS   Naqvi,M.
  TITLE     Whole genome sequencing and characterization of Corynebacterium
            isolated from the ocular surface of dry eye disease sufferers
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2460663)
  AUTHORS   Naqvi,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-FEB-2024) Pharmacy, OsloMet, Pilestredet 46, Oslo
            0167, Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAHUS000000000.1.
            The Corynebacterium propinquum whole genome shotgun (WGS) project
            has the project accession NZ_JBAHUS000000000.  This version of the
            project (01) has the accession number NZ_JBAHUS010000000, and
            consists of sequences JBAHUS010000001-JBAHUS010000028.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 138x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037465575.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:25:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,230
            CDSs (total)                      :: 2,178
            Genes (coding)                    :: 2,126
            CDSs (with protein)               :: 2,126
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 23 of 52
            Pseudo Genes (incomplete)         :: 33 of 52
            Pseudo Genes (internal stop)      :: 3 of 52
            Pseudo Genes (multiple problems)  :: 7 of 52
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2460663
                     /organism="Corynebacterium propinquum"
                     /mol_type="genomic DNA"
                     /strain="PCR1"
                     /isolation_source="Tear sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:43769"
                     /geo_loc_name="Norway: Oslo"
                     /collection_date="2022-10"
                     /collected_by="Oslo Metropolitan University"
WGS         JBAHUS010000001-JBAHUS010000028
WGS_SCAFLD  NZ_JBAHUS010000001-NZ_JBAHUS010000028
//
LOCUS       NZ_JBAHVC010000000   2520817 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Corynebacterium accolens strain PCR20, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBAHVC000000000
VERSION     NZ_JBAHVC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39854119
            Assembly: GCF_037465155.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium accolens
  ORGANISM  Corynebacterium accolens
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2520817)
  AUTHORS   Naqvi,M.
  TITLE     Whole genome sequencing and characterization of Corynebacterium
            isolated from the ocular surface of dry eye disease sufferers
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2520817)
  AUTHORS   Naqvi,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-FEB-2024) Pharmacy, OsloMet, Pilestredet 46, Oslo
            0167, Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAHVC000000000.1.
            The Corynebacterium accolens whole genome shotgun (WGS) project has
            the project accession NZ_JBAHVC000000000.  This version of the
            project (01) has the accession number NZ_JBAHVC010000000, and
            consists of sequences JBAHVC010000001-JBAHVC010000044.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 139x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037465155.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:33:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,427
            CDSs (total)                      :: 2,370
            Genes (coding)                    :: 2,319
            CDSs (with protein)               :: 2,319
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 24 of 51
            Pseudo Genes (incomplete)         :: 33 of 51
            Pseudo Genes (internal stop)      :: 6 of 51
            Pseudo Genes (multiple problems)  :: 10 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2520817
                     /organism="Corynebacterium accolens"
                     /mol_type="genomic DNA"
                     /strain="PCR20"
                     /isolation_source="Tear sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:38284"
                     /geo_loc_name="Norway: Oslo"
                     /collection_date="2022-10"
                     /collected_by="Oslo Metropolitan University"
WGS         JBAHVC010000001-JBAHVC010000044
WGS_SCAFLD  NZ_JBAHVC010000001-NZ_JBAHVC010000044
//
LOCUS       NZ_QPXO01000000      2807450 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Enterococcus faecalis strain 5A-15, whole genome shotgun sequencing
            project.
ACCESSION   NZ_QPXO00000000
VERSION     NZ_QPXO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09435164
            Assembly: GCF_005238165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2807450)
  AUTHORS   Rushton-Green,R., Darnell,R.L., Taiaroa,G., Carter,G.P., Cook,G.M.
            and Morgan,X.C.
  TITLE     Agricultural Origins of a Highly Persistent Lineage of
            Vancomycin-Resistant Enterococcus faecalis in New Zealand
  JOURNAL   Appl Environ Microbiol 85 (13), e00137-19 (2019)
   PUBMED   31028029
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2807450)
  AUTHORS   Rushton-Green,R., Taiaroa,G., Darnell,R.L., Carter,G.P.,
            Williamson,D.A., Cook,G.M. and Morgan,X.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-JUN-2018) Microbiology and Immunology, University of
            Otago, 720 Cumberland St, Dunedin, Otago 9054, New Zealand
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QPXO00000000.1.
            The Enterococcus faecalis whole genome shotgun (WGS) project has
            the project accession NZ_QPXO00000000.  This version of the project
            (01) has the accession number NZ_QPXO01000000, and consists of
            sequences QPXO01000001-QPXO01000039.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005238165.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:30:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,738
            CDSs (total)                      :: 2,674
            Genes (coding)                    :: 2,638
            CDSs (with protein)               :: 2,638
            Genes (RNA)                       :: 64
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 15 of 36
            Pseudo Genes (incomplete)         :: 21 of 36
            Pseudo Genes (internal stop)      :: 4 of 36
            Pseudo Genes (multiple problems)  :: 4 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2807450
                     /organism="Enterococcus faecalis"
                     /mol_type="genomic DNA"
                     /strain="5A-15"
                     /isolation_source="poultry feces"
                     /host="Gallus gallus domesticus"
                     /db_xref="taxon:1351"
                     /geo_loc_name="New Zealand"
                     /collection_date="2000"
                     /collected_by="Janet Manson"
WGS         QPXO01000001-QPXO01000039
WGS_SCAFLD  NZ_QPXO01000001-NZ_QPXO01000039
//
LOCUS       NZ_JBAHUX010000000   2274973 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Corynebacterium marquesiae strain PCR25, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBAHUX000000000
VERSION     NZ_JBAHUX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39854114
            Assembly: GCF_037465345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium marquesiae
  ORGANISM  Corynebacterium marquesiae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2274973)
  AUTHORS   Naqvi,M.
  TITLE     Whole genome sequencing and characterization of Corynebacterium
            isolated from the ocular surface of dry eye disease sufferers
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2274973)
  AUTHORS   Naqvi,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-FEB-2024) Pharmacy, OsloMet, Pilestredet 46, Oslo
            0167, Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAHUX000000000.1.
            The Corynebacterium marquesiae whole genome shotgun (WGS) project
            has the project accession NZ_JBAHUX000000000.  This version of the
            project (01) has the accession number NZ_JBAHUX010000000, and
            consists of sequences JBAHUX010000001-JBAHUX010000066.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 136x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037465345.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:26:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,195
            CDSs (total)                      :: 2,137
            Genes (coding)                    :: 2,108
            CDSs (with protein)               :: 2,108
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 15 of 29
            Pseudo Genes (incomplete)         :: 15 of 29
            Pseudo Genes (internal stop)      :: 7 of 29
            Pseudo Genes (multiple problems)  :: 7 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2274973
                     /organism="Corynebacterium marquesiae"
                     /mol_type="genomic DNA"
                     /strain="PCR25"
                     /isolation_source="Tear sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:2913503"
                     /geo_loc_name="Norway: Oslo"
                     /collection_date="2022-10"
                     /collected_by="Oslo Metropolitan University"
WGS         JBAHUX010000001-JBAHUX010000066
WGS_SCAFLD  NZ_JBAHUX010000001-NZ_JBAHUX010000066
//
LOCUS       NZ_QPVK01000000      2900225 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Enterococcus faecalis strain TV32, whole genome shotgun sequencing
            project.
ACCESSION   NZ_QPVK00000000
VERSION     NZ_QPVK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09435220
            Assembly: GCF_005236425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2900225)
  AUTHORS   Rushton-Green,R., Darnell,R.L., Taiaroa,G., Carter,G.P., Cook,G.M.
            and Morgan,X.C.
  TITLE     Agricultural Origins of a Highly Persistent Lineage of
            Vancomycin-Resistant Enterococcus faecalis in New Zealand
  JOURNAL   Appl Environ Microbiol 85 (13), e00137-19 (2019)
   PUBMED   31028029
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2900225)
  AUTHORS   Rushton-Green,R., Taiaroa,G., Darnell,R.L., Carter,G.P.,
            Williamson,D.A., Cook,G.M. and Morgan,X.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-JUN-2018) Microbiology and Immunology, University of
            Otago, 720 Cumberland St, Dunedin, Otago 9054, New Zealand
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QPVK00000000.1.
            The Enterococcus faecalis whole genome shotgun (WGS) project has
            the project accession NZ_QPVK00000000.  This version of the project
            (01) has the accession number NZ_QPVK01000000, and consists of
            sequences QPVK01000001-QPVK01000071.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 141x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005236425.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:30:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,858
            CDSs (total)                      :: 2,795
            Genes (coding)                    :: 2,741
            CDSs (with protein)               :: 2,741
            Genes (RNA)                       :: 63
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 23 of 54
            Pseudo Genes (incomplete)         :: 30 of 54
            Pseudo Genes (internal stop)      :: 7 of 54
            Pseudo Genes (multiple problems)  :: 6 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2900225
                     /organism="Enterococcus faecalis"
                     /mol_type="genomic DNA"
                     /strain="TV32"
                     /isolation_source="poultry feces"
                     /host="Gallus gallus domesticus"
                     /db_xref="taxon:1351"
                     /geo_loc_name="New Zealand"
                     /collection_date="2002/2003"
                     /collected_by="Janet Manson"
WGS         QPVK01000001-QPVK01000071
WGS_SCAFLD  NZ_QPVK01000001-NZ_QPVK01000071
//
LOCUS       NZ_JBAHUV010000000   2275872 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Corynebacterium marquesiae strain PCR 2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBAHUV000000000
VERSION     NZ_JBAHUV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39854112
            Assembly: GCF_037465595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium marquesiae
  ORGANISM  Corynebacterium marquesiae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2275872)
  AUTHORS   Naqvi,M.
  TITLE     Whole genome sequencing and characterization of Corynebacterium
            isolated from the ocular surface of dry eye disease sufferers
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2275872)
  AUTHORS   Naqvi,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-FEB-2024) Pharmacy, OsloMet, Pilestredet 46, Oslo
            0167, Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAHUV000000000.1.
            The Corynebacterium marquesiae whole genome shotgun (WGS) project
            has the project accession NZ_JBAHUV000000000.  This version of the
            project (01) has the accession number NZ_JBAHUV010000000, and
            consists of sequences JBAHUV010000001-JBAHUV010000073.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 143x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037465595.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:29:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,199
            CDSs (total)                      :: 2,141
            Genes (coding)                    :: 2,106
            CDSs (with protein)               :: 2,106
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 17 of 35
            Pseudo Genes (incomplete)         :: 21 of 35
            Pseudo Genes (internal stop)      :: 7 of 35
            Pseudo Genes (multiple problems)  :: 9 of 35
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2275872
                     /organism="Corynebacterium marquesiae"
                     /mol_type="genomic DNA"
                     /strain="PCR 2"
                     /isolation_source="Tear sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:2913503"
                     /geo_loc_name="Norway: Oslo"
                     /collection_date="2022-10"
                     /collected_by="Oslo Metropolitan University"
WGS         JBAHUV010000001-JBAHUV010000073
WGS_SCAFLD  NZ_JBAHUV010000001-NZ_JBAHUV010000073
//
LOCUS       NZ_APWU01000000      3123189 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Enterococcus faecalis KACC 91532, whole genome shotgun sequencing
            project.
ACCESSION   NZ_APWU00000000
VERSION     NZ_APWU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02047473
            Assembly: GCF_004802475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecalis KACC 91532
  ORGANISM  Enterococcus faecalis KACC 91532
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 3123189)
  AUTHORS   Ham,J.S., Kwak,W., Chang,O.K., Han,G.S., Jeong,S.G., Seol,K.H.,
            Kim,H.W., Kang,G.H., Park,B.Y., Lee,H.J., Kim,J.G., Kim,K.W.,
            Sung,S., Lee,T., Cho,S. and Kim,H.
  TITLE     De Novo assembly and comparative analysis of the Enterococcus
            faecalis genome (KACC 91532) from a Korean Neonate
  JOURNAL   J Microbiol Biotechnol 23 (7), 966-973 (2013)
   PUBMED   23711517
REFERENCE   2  (bases 1 to 3123189)
  AUTHORS   Ham,J.S. and Kwak,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-APR-2013) Division of Animal Genomics, National
            Institute of Animal Science, Rural Development Administration, 564
            Omockchun-dong, Suwon, Gyeonggi-do 441-706, South Korea
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            APWU00000000.1.
            The Enterococcus faecalis KACC 91532 whole genome shotgun (WGS)
            project has the project accession NZ_APWU00000000.  This version of
            the project (01) has the accession number NZ_APWU01000000, and
            consists of sequences APWU01000001-APWU01000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Newbler v. 2.8; SOAPdenovo v. 1.05;
                                     AllPaths v. 44008
            Genome Coverage       :: 600.0x
            Sequencing Technology :: 454; Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004802475.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:40:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,076
            CDSs (total)                      :: 3,005
            Genes (coding)                    :: 2,913
            CDSs (with protein)               :: 2,913
            Genes (RNA)                       :: 71
            rRNAs                             :: 4, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 3, 4 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 40 of 92
            Pseudo Genes (incomplete)         :: 45 of 92
            Pseudo Genes (internal stop)      :: 18 of 92
            Pseudo Genes (multiple problems)  :: 11 of 92
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3123189
                     /organism="Enterococcus faecalis KACC 91532"
                     /mol_type="genomic DNA"
                     /strain="KACC 91532"
                     /culture_collection="KACC:91532"
                     /db_xref="taxon:1312377"
WGS         APWU01000001-APWU01000005
WGS_SCAFLD  NZ_APWU01000001-NZ_APWU01000005
//
LOCUS       NZ_VDFN01000000      2428248 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Companilactobacillus mishanensis strain TMW 1.2098, whole genome
            shotgun sequencing project.
ACCESSION   NZ_VDFN00000000
VERSION     NZ_VDFN00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11864207
            Assembly: GCF_009600965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Companilactobacillus mishanensis
  ORGANISM  Companilactobacillus mishanensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Companilactobacillus.
REFERENCE   1  (bases 1 to 2428248)
  AUTHORS   Schuster,J.A., Klingl,A., Vogel,R.F. and Ehrmann,M.A.
  TITLE     Polyphasic characterization of two novel Lactobacillus spp.
            isolated from blown salami packages: Description of Lactobacillus
            halodurans sp. nov. and Lactobacillus salsicarnum sp. nov
  JOURNAL   Syst Appl Microbiol 42 (6), 126023 (2019)
   PUBMED   31668878
REFERENCE   2  (bases 1 to 2428248)
  AUTHORS   Schuster,J.A. and Ehrmann,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-MAY-2019) Technische Mikrobiologie, Technische
            Universitaet Muenchen, Gregor-Mendel Str. 4, Freising 85354,
            Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VDFN00000000.1.
            The Companilactobacillus mishanensis whole genome shotgun (WGS)
            project has the project accession NZ_VDFN00000000.  This version of
            the project (01) has the accession number NZ_VDFN01000000, and
            consists of sequences VDFN01000001-VDFN01000035.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: ABySS v. MAR-2019
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009600965.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:09:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,386
            CDSs (total)                      :: 2,328
            Genes (coding)                    :: 2,303
            CDSs (with protein)               :: 2,303
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 25
            CDSs (without protein)            :: 25
            Pseudo Genes (ambiguous residues) :: 0 of 25
            Pseudo Genes (frameshifted)       :: 6 of 25
            Pseudo Genes (incomplete)         :: 13 of 25
            Pseudo Genes (internal stop)      :: 10 of 25
            Pseudo Genes (multiple problems)  :: 3 of 25
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2428248
                     /organism="Companilactobacillus mishanensis"
                     /mol_type="genomic DNA"
                     /strain="TMW 1.2098"
                     /isolation_source="expanded salami packages"
                     /type_material="type strain of Companilactobacillus
                     salsicarnum"
                     /db_xref="taxon:2486008"
                     /geo_loc_name="Germany: Munich"
                     /collection_date="2018-02-24"
WGS         VDFN01000001-VDFN01000035
WGS_SCAFLD  NZ_VDFN01000001-NZ_VDFN01000035
//
LOCUS       NZ_JBAHUZ010000000   2291438 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Corynebacterium marquesiae strain PCR27, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBAHUZ000000000
VERSION     NZ_JBAHUZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39854116
            Assembly: GCF_037465375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium marquesiae
  ORGANISM  Corynebacterium marquesiae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2291438)
  AUTHORS   Naqvi,M.
  TITLE     Whole genome sequencing and characterization of Corynebacterium
            isolated from the ocular surface of dry eye disease sufferers
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2291438)
  AUTHORS   Naqvi,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-FEB-2024) Pharmacy, OsloMet, Pilestredet 46, Oslo
            0167, Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAHUZ000000000.1.
            The Corynebacterium marquesiae whole genome shotgun (WGS) project
            has the project accession NZ_JBAHUZ000000000.  This version of the
            project (01) has the accession number NZ_JBAHUZ010000000, and
            consists of sequences JBAHUZ010000001-JBAHUZ010000073.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 140x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037465375.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:31:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,257
            CDSs (total)                      :: 2,199
            Genes (coding)                    :: 2,158
            CDSs (with protein)               :: 2,158
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 41
            CDSs (without protein)            :: 41
            Pseudo Genes (ambiguous residues) :: 0 of 41
            Pseudo Genes (frameshifted)       :: 18 of 41
            Pseudo Genes (incomplete)         :: 25 of 41
            Pseudo Genes (internal stop)      :: 7 of 41
            Pseudo Genes (multiple problems)  :: 8 of 41
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2291438
                     /organism="Corynebacterium marquesiae"
                     /mol_type="genomic DNA"
                     /strain="PCR27"
                     /isolation_source="Tear sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:2913503"
                     /geo_loc_name="Norway: Oslo"
                     /collection_date="2022-10"
                     /collected_by="Oslo Metropolitan University"
WGS         JBAHUZ010000001-JBAHUZ010000073
WGS_SCAFLD  NZ_JBAHUZ010000001-NZ_JBAHUZ010000073
//
LOCUS       NZ_JASOXO010000000   2972272 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Enterococcus faecalis strain UMB8324, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JASOXO000000000
VERSION     NZ_JASOXO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34998695
            Assembly: GCF_030226175.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2972272)
  AUTHORS   Du,J.
  TITLE     Genomic Catalog of Human Bladder Bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2972272)
  AUTHORS   Du,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAY-2023) LUMC, Loyola University Chicago, S 1st
            avenue, Chicago, IL 60153, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JASOXO000000000.1.
            The Enterococcus faecalis whole genome shotgun (WGS) project has
            the project accession NZ_JASOXO000000000.  This version of the
            project (01) has the accession number NZ_JASOXO010000000, and
            consists of sequences JASOXO010000001-JASOXO010000077.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 239.03x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_030226175.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:40:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,919
            CDSs (total)                      :: 2,858
            Genes (coding)                    :: 2,788
            CDSs (with protein)               :: 2,788
            Genes (RNA)                       :: 61
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 27 of 70
            Pseudo Genes (incomplete)         :: 45 of 70
            Pseudo Genes (internal stop)      :: 11 of 70
            Pseudo Genes (multiple problems)  :: 12 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2972272
                     /organism="Enterococcus faecalis"
                     /mol_type="genomic DNA"
                     /strain="UMB8324"
                     /isolation_source="Urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:1351"
                     /geo_loc_name="USA: Maywood, IL"
                     /lat_lon="41.85911095 N 87.83527146 W"
WGS         JASOXO010000001-JASOXO010000077
WGS_SCAFLD  NZ_JASOXO010000001-NZ_JASOXO010000077
//
LOCUS       NZ_LSWX01000000      2398960 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Corynebacterium diphtheriae bv. gravis strain 5191, whole genome
            shotgun sequencing project.
ACCESSION   NZ_LSWX00000000
VERSION     NZ_LSWX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04497024
            Assembly: GCF_002203625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium diphtheriae bv. gravis
  ORGANISM  Corynebacterium diphtheriae bv. gravis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2398960)
  AUTHORS   Grosse-Kock,S., Kolodkina,V., Schwalbe,E.C., Blom,J., Burkovski,A.,
            Hoskisson,P.A., Brisse,S., Smith,D., Sutcliffe,I.C., Titov,L. and
            Sangal,V.
  TITLE     Genomic analysis of endemic clones of toxigenic and non-toxigenic
            Corynebacterium diphtheriae in Belarus during and after the major
            epidemic in 1990s
  JOURNAL   BMC Genomics 18 (1), 873 (2017)
   PUBMED   29132312
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2398960)
  AUTHORS   Sangal,V. and Titov,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-FEB-2016) Faculty of Health and Life Sciences,
            Northumbria University, Ellison Place, Newcastle upon Tyne NE1 8ST,
            United Kingdom (Great Britain)
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            LSWX00000000.1.
            The Corynebacterium diphtheriae bv. gravis whole genome shotgun
            (WGS) project has the project accession NZ_LSWX00000000.  This
            version of the project (01) has the accession number
            NZ_LSWX01000000, and consists of sequences
            LSWX01000001-LSWX01000065.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.1
            Assembly Name          :: S82
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 39.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002203625.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:20:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,292
            CDSs (total)                      :: 2,236
            Genes (coding)                    :: 2,157
            CDSs (with protein)               :: 2,157
            Genes (RNA)                       :: 56
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 49
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 79
            CDSs (without protein)            :: 79
            Pseudo Genes (ambiguous residues) :: 0 of 79
            Pseudo Genes (frameshifted)       :: 36 of 79
            Pseudo Genes (incomplete)         :: 55 of 79
            Pseudo Genes (internal stop)      :: 10 of 79
            Pseudo Genes (multiple problems)  :: 18 of 79
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2398960
                     /organism="Corynebacterium diphtheriae bv. gravis"
                     /mol_type="genomic DNA"
                     /strain="5191"
                     /host="Homo sapiens"
                     /db_xref="taxon:1720349"
                     /geo_loc_name="Belarus: Minsk"
                     /lat_lon="53.90 N 27.56 E"
                     /collection_date="2013"
                     /collected_by="L. Titov"
                     /biovar="gravis"
WGS         LSWX01000001-LSWX01000065
WGS_SCAFLD  NZ_LSWX01000001-NZ_LSWX01000065
//
LOCUS       NZ_QPYS01000000      2880557 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Enterococcus faecalis strain 12-8-01, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QPYS00000000
VERSION     NZ_QPYS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09435134
            Assembly: GCF_005236985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2880557)
  AUTHORS   Rushton-Green,R., Darnell,R.L., Taiaroa,G., Carter,G.P., Cook,G.M.
            and Morgan,X.C.
  TITLE     Agricultural Origins of a Highly Persistent Lineage of
            Vancomycin-Resistant Enterococcus faecalis in New Zealand
  JOURNAL   Appl Environ Microbiol 85 (13), e00137-19 (2019)
   PUBMED   31028029
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2880557)
  AUTHORS   Rushton-Green,R., Taiaroa,G., Darnell,R.L., Carter,G.P.,
            Williamson,D.A., Cook,G.M. and Morgan,X.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-JUN-2018) Microbiology and Immunology, University of
            Otago, 720 Cumberland St, Dunedin, Otago 9054, New Zealand
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QPYS00000000.1.
            The Enterococcus faecalis whole genome shotgun (WGS) project has
            the project accession NZ_QPYS00000000.  This version of the project
            (01) has the accession number NZ_QPYS01000000, and consists of
            sequences QPYS01000001-QPYS01000075.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 98x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_005236985.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:19:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,824
            CDSs (total)                      :: 2,760
            Genes (coding)                    :: 2,704
            CDSs (with protein)               :: 2,704
            Genes (RNA)                       :: 64
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 56
            CDSs (without protein)            :: 56
            Pseudo Genes (ambiguous residues) :: 0 of 56
            Pseudo Genes (frameshifted)       :: 20 of 56
            Pseudo Genes (incomplete)         :: 33 of 56
            Pseudo Genes (internal stop)      :: 8 of 56
            Pseudo Genes (multiple problems)  :: 5 of 56
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2880557
                     /organism="Enterococcus faecalis"
                     /mol_type="genomic DNA"
                     /strain="12-8-01"
                     /isolation_source="poultry feces"
                     /host="Gallus gallus domesticus"
                     /db_xref="taxon:1351"
                     /geo_loc_name="New Zealand"
                     /collection_date="2001"
                     /collected_by="Janet Manson"
WGS         QPYS01000001-QPYS01000075
WGS_SCAFLD  NZ_QPYS01000001-NZ_QPYS01000075
//
LOCUS       NZ_JBAHVA010000000   2520740 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Corynebacterium accolens strain PCR4, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBAHVA000000000
VERSION     NZ_JBAHVA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39854117
            Assembly: GCF_037465395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium accolens
  ORGANISM  Corynebacterium accolens
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2520740)
  AUTHORS   Naqvi,M.
  TITLE     Whole genome sequencing and characterization of Corynebacterium
            isolated from the ocular surface of dry eye disease sufferers
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2520740)
  AUTHORS   Naqvi,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-FEB-2024) Pharmacy, OsloMet, Pilestredet 46, Oslo
            0167, Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAHVA000000000.1.
            The Corynebacterium accolens whole genome shotgun (WGS) project has
            the project accession NZ_JBAHVA000000000.  This version of the
            project (01) has the accession number NZ_JBAHVA010000000, and
            consists of sequences JBAHVA010000001-JBAHVA010000044.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 141x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037465395.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:33:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,429
            CDSs (total)                      :: 2,372
            Genes (coding)                    :: 2,321
            CDSs (with protein)               :: 2,321
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 25 of 51
            Pseudo Genes (incomplete)         :: 32 of 51
            Pseudo Genes (internal stop)      :: 6 of 51
            Pseudo Genes (multiple problems)  :: 10 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2520740
                     /organism="Corynebacterium accolens"
                     /mol_type="genomic DNA"
                     /strain="PCR4"
                     /isolation_source="Tear sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:38284"
                     /geo_loc_name="Norway: Oslo"
                     /collection_date="2022-10"
                     /collected_by="Oslo Metropolitan University"
WGS         JBAHVA010000001-JBAHVA010000044
WGS_SCAFLD  NZ_JBAHVA010000001-NZ_JBAHVA010000044
//
LOCUS       NZ_JBAHVM010000000   2653451 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Corynebacterium bovis strain PCR37, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBAHVM000000000
VERSION     NZ_JBAHVM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39854129
            Assembly: GCF_037464955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium bovis
  ORGANISM  Corynebacterium bovis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2653451)
  AUTHORS   Naqvi,M.
  TITLE     Whole genome sequencing and characterization of Corynebacterium
            isolated from the ocular surface of dry eye disease sufferers
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2653451)
  AUTHORS   Naqvi,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-FEB-2024) Pharmacy, OsloMet, Pilestredet 46, Oslo
            0167, Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAHVM000000000.1.
            The Corynebacterium bovis whole genome shotgun (WGS) project has
            the project accession NZ_JBAHVM000000000.  This version of the
            project (01) has the accession number NZ_JBAHVM010000000, and
            consists of sequences JBAHVM010000001-JBAHVM010000012.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 145x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037464955.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:33:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,128
            Genes (coding)                    :: 2,100
            CDSs (with protein)               :: 2,100
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 7 of 28
            Pseudo Genes (incomplete)         :: 22 of 28
            Pseudo Genes (internal stop)      :: 1 of 28
            Pseudo Genes (multiple problems)  :: 2 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2653451
                     /organism="Corynebacterium bovis"
                     /mol_type="genomic DNA"
                     /strain="PCR37"
                     /isolation_source="Tear sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:36808"
                     /geo_loc_name="Norway: Oslo"
                     /collection_date="2022-10"
                     /collected_by="Oslo Metropolitan University"
WGS         JBAHVM010000001-JBAHVM010000012
WGS_SCAFLD  NZ_JBAHVM010000001-NZ_JBAHVM010000012
//
LOCUS       NZ_JBAHVN010000000   2625539 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Corynebacterium bovis strain PCR38, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBAHVN000000000
VERSION     NZ_JBAHVN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39854130
            Assembly: GCF_037464995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium bovis
  ORGANISM  Corynebacterium bovis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2625539)
  AUTHORS   Naqvi,M.
  TITLE     Whole genome sequencing and characterization of Corynebacterium
            isolated from the ocular surface of dry eye disease sufferers
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2625539)
  AUTHORS   Naqvi,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-FEB-2024) Pharmacy, OsloMet, Pilestredet 46, Oslo
            0167, Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAHVN000000000.1.
            The Corynebacterium bovis whole genome shotgun (WGS) project has
            the project accession NZ_JBAHVN000000000.  This version of the
            project (01) has the accession number NZ_JBAHVN010000000, and
            consists of sequences JBAHVN010000001-JBAHVN010000018.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 144x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037464995.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:43:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,164
            CDSs (total)                      :: 2,106
            Genes (coding)                    :: 2,081
            CDSs (with protein)               :: 2,081
            Genes (RNA)                       :: 58
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 25
            CDSs (without protein)            :: 25
            Pseudo Genes (ambiguous residues) :: 0 of 25
            Pseudo Genes (frameshifted)       :: 8 of 25
            Pseudo Genes (incomplete)         :: 15 of 25
            Pseudo Genes (internal stop)      :: 3 of 25
            Pseudo Genes (multiple problems)  :: 1 of 25
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2625539
                     /organism="Corynebacterium bovis"
                     /mol_type="genomic DNA"
                     /strain="PCR38"
                     /isolation_source="Tear sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:36808"
                     /geo_loc_name="Norway: Oslo"
                     /collection_date="2022-10"
                     /collected_by="Oslo Metropolitan University"
WGS         JBAHVN010000001-JBAHVN010000018
WGS_SCAFLD  NZ_JBAHVN010000001-NZ_JBAHVN010000018
//
LOCUS       NZ_JBAHVO010000000   2651935 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Corynebacterium bovis strain PCRi, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBAHVO000000000
VERSION     NZ_JBAHVO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39854131
            Assembly: GCF_037464965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium bovis
  ORGANISM  Corynebacterium bovis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2651935)
  AUTHORS   Naqvi,M.
  TITLE     Whole genome sequencing and characterization of Corynebacterium
            isolated from the ocular surface of dry eye disease sufferers
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2651935)
  AUTHORS   Naqvi,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-FEB-2024) Pharmacy, OsloMet, Pilestredet 46, Oslo
            0167, Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAHVO000000000.1.
            The Corynebacterium bovis whole genome shotgun (WGS) project has
            the project accession NZ_JBAHVO000000000.  This version of the
            project (01) has the accession number NZ_JBAHVO010000000, and
            consists of sequences JBAHVO010000001-JBAHVO010000011.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 144x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037464965.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:32:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,127
            Genes (coding)                    :: 2,102
            CDSs (with protein)               :: 2,102
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 25
            CDSs (without protein)            :: 25
            Pseudo Genes (ambiguous residues) :: 0 of 25
            Pseudo Genes (frameshifted)       :: 4 of 25
            Pseudo Genes (incomplete)         :: 22 of 25
            Pseudo Genes (internal stop)      :: 1 of 25
            Pseudo Genes (multiple problems)  :: 2 of 25
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2651935
                     /organism="Corynebacterium bovis"
                     /mol_type="genomic DNA"
                     /strain="PCRi"
                     /isolation_source="Tear sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:36808"
                     /geo_loc_name="Norway: Oslo"
                     /collection_date="2022-10"
                     /collected_by="Oslo Metropolitan University"
WGS         JBAHVO010000001-JBAHVO010000011
WGS_SCAFLD  NZ_JBAHVO010000001-NZ_JBAHVO010000011
//
LOCUS       NZ_JBAHUY010000000   2274969 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Corynebacterium marquesiae strain PCR26, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBAHUY000000000
VERSION     NZ_JBAHUY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39854115
            Assembly: GCF_037465385.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium marquesiae
  ORGANISM  Corynebacterium marquesiae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2274969)
  AUTHORS   Naqvi,M.
  TITLE     Whole genome sequencing and characterization of Corynebacterium
            isolated from the ocular surface of dry eye disease sufferers
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2274969)
  AUTHORS   Naqvi,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-FEB-2024) Pharmacy, OsloMet, Pilestredet 46, Oslo
            0167, Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAHUY000000000.1.
            The Corynebacterium marquesiae whole genome shotgun (WGS) project
            has the project accession NZ_JBAHUY000000000.  This version of the
            project (01) has the accession number NZ_JBAHUY010000000, and
            consists of sequences JBAHUY010000001-JBAHUY010000066.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 141x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037465385.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:32:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,193
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,106
            CDSs (with protein)               :: 2,106
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 30
            CDSs (without protein)            :: 30
            Pseudo Genes (ambiguous residues) :: 0 of 30
            Pseudo Genes (frameshifted)       :: 15 of 30
            Pseudo Genes (incomplete)         :: 16 of 30
            Pseudo Genes (internal stop)      :: 7 of 30
            Pseudo Genes (multiple problems)  :: 7 of 30
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2274969
                     /organism="Corynebacterium marquesiae"
                     /mol_type="genomic DNA"
                     /strain="PCR26"
                     /isolation_source="Tear sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:2913503"
                     /geo_loc_name="Norway: Oslo"
                     /collection_date="2022-10"
                     /collected_by="Oslo Metropolitan University"
WGS         JBAHUY010000001-JBAHUY010000066
WGS_SCAFLD  NZ_JBAHUY010000001-NZ_JBAHUY010000066
//
LOCUS       NZ_SROZ01000000      8169427 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Ensifer canadensis strain SHC 2-14, whole genome shotgun sequencing
            project.
ACCESSION   NZ_SROZ00000000
VERSION     NZ_SROZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11339517
            Assembly: GCF_013141885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ensifer canadensis
  ORGANISM  Ensifer canadensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Ensifer.
REFERENCE   1  (bases 1 to 8169427)
  AUTHORS   Grouzdev,D.S. and Nazina,T.N.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-APR-2019) Institute of Bioengineering, Research
            Center of Biotechnology RAS, Leninsky ave, Moscow 117312, Russian
            Federation
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SROZ00000000.1.
            The Ensifer canadensis whole genome shotgun (WGS) project has the
            project accession NZ_SROZ00000000.  This version of the project
            (01) has the accession number NZ_SROZ01000000, and consists of
            sequences SROZ01000001-SROZ01000057.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: MAR-2019
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 165x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013141885.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:52:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,843
            CDSs (total)                      :: 7,786
            Genes (coding)                    :: 7,546
            CDSs (with protein)               :: 7,546
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 240
            CDSs (without protein)            :: 240
            Pseudo Genes (ambiguous residues) :: 0 of 240
            Pseudo Genes (frameshifted)       :: 132 of 240
            Pseudo Genes (incomplete)         :: 164 of 240
            Pseudo Genes (internal stop)      :: 25 of 240
            Pseudo Genes (multiple problems)  :: 73 of 240
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8169427
                     /organism="Ensifer canadensis"
                     /mol_type="genomic DNA"
                     /strain="SHC 2-14"
                     /isolation_source="groundwater in the area of the surface
                     repository of radioactive waste"
                     /db_xref="taxon:555315"
                     /geo_loc_name="Russia: Tomsk region"
                     /collection_date="2015"
                     /collected_by="Babich T.L."
                     /identified_by="Babich T.L., Sokolova D.S."
WGS         SROZ01000001-SROZ01000057
WGS_SCAFLD  NZ_SROZ01000001-NZ_SROZ01000057
//
LOCUS       NZ_JBIGZC010000000   5438565 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E487, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGZC000000000
VERSION     NZ_JBIGZC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235483
            Assembly: GCF_045583525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5438565)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGZC000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGZC000000000.  This version of the project
            (01) has the accession number NZ_JBIGZC010000000, and consists of
            sequences JBIGZC010000001-JBIGZC010000011.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 335x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045583525.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:47:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,461
            CDSs (total)                      :: 5,343
            Genes (coding)                    :: 4,953
            CDSs (with protein)               :: 4,953
            Genes (RNA)                       :: 118
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 90
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 390
            CDSs (without protein)            :: 390
            Pseudo Genes (ambiguous residues) :: 0 of 390
            Pseudo Genes (frameshifted)       :: 246 of 390
            Pseudo Genes (incomplete)         :: 170 of 390
            Pseudo Genes (internal stop)      :: 43 of 390
            Pseudo Genes (multiple problems)  :: 63 of 390
            Pseudo Genes (short protein)      :: 1 of 390
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5438565
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E487"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGZC010000001-JBIGZC010000011
WGS_SCAFLD  NZ_JBIGZC010000001-NZ_JBIGZC010000011
//
LOCUS       NZ_CEVKRI010000000   4832614 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Enterobacter hormaechei isolate 01768027, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CEVKRI000000000
VERSION     NZ_CEVKRI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA121971938
            Assembly: GCF_982303555.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 4832614)
  AUTHORS   Day,M., Rodrigues,C. and Williams,D.
  CONSRTM   OPS, AMRHAI, UKHSA
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2026) UKHSA, Opportunistic Pathogens Section, 61
            Colindale Avenue, London, NW9 5EQ, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CEVKRI000000000.1.
            The Enterobacter hormaechei whole genome shotgun (WGS) project has
            the project accession NZ_CEVKRI000000000.  This version of the
            project (01) has the accession number NZ_CEVKRI010000000, and
            consists of sequences CEVKRI010000001-CEVKRI010000246.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_982303555.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:27:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,744
            CDSs (total)                      :: 4,649
            Genes (coding)                    :: 4,550
            CDSs (with protein)               :: 4,550
            Genes (RNA)                       :: 95
            rRNAs                             :: 3, 9, 20 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 9, 20 (5S, 16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 99
            CDSs (without protein)            :: 99
            Pseudo Genes (ambiguous residues) :: 0 of 99
            Pseudo Genes (frameshifted)       :: 32 of 99
            Pseudo Genes (incomplete)         :: 68 of 99
            Pseudo Genes (internal stop)      :: 14 of 99
            Pseudo Genes (multiple problems)  :: 13 of 99
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4832614
                     /organism="Enterobacter hormaechei"
                     /mol_type="genomic DNA"
                     /isolate="01768027"
                     /db_xref="taxon:158836"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2025"
WGS         CEVKRI010000001-CEVKRI010000246
WGS_SCAFLD  NZ_CEVKRI010000001-NZ_CEVKRI010000246
//
LOCUS       NZ_JAFKCK010000000   5142584 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Enterobacter roggenkampii strain BK34099, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAFKCK000000000
VERSION     NZ_JAFKCK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN18062301
            Assembly: GCF_018881405.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter roggenkampii
  ORGANISM  Enterobacter roggenkampii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 5142584)
  AUTHORS   Klein,S., Boutin,S., Kocer,K., Fiedler,M.O., Storzinger,D.,
            Weigand,M.A., Tan,B., Richter,D., Rupp,C., Mieth,M., Mehrabi,A.,
            Hackert,T., Zimmermann,S., Heeg,K. and Nurjadi,D.
  TITLE     Rapid Development of Cefiderocol Resistance in Carbapenem-resistant
            Enterobacter cloacae During Therapy Is Associated With
            Heterogeneous Mutations in the Catecholate Siderophore Receptor
            cirA
  JOURNAL   Clin Infect Dis 74 (5), 905-908 (2022)
   PUBMED   34079986
REFERENCE   2  (bases 1 to 5142584)
  AUTHORS   Nurjadi,D. and Boutin,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-FEB-2021) Medical Microbiology and Hygiene,
            Heidelberg University Hospital, Im Neuenheimer Feld 324, Heidelberg
            69120, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAFKCK000000000.1.
            The Enterobacter roggenkampii whole genome shotgun (WGS) project
            has the project accession NZ_JAFKCK000000000.  This version of the
            project (01) has the accession number NZ_JAFKCK010000000, and
            consists of sequences JAFKCK010000001-JAFKCK010000057.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: spades v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 27x
            Sequencing Technology  :: Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_018881405.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:45:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,999
            CDSs (total)                      :: 4,905
            Genes (coding)                    :: 4,820
            CDSs (with protein)               :: 4,820
            Genes (RNA)                       :: 94
            rRNAs                             :: 8, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 7 (5S)
            partial rRNAs                     :: 1, 3, 2 (5S, 16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 85
            CDSs (without protein)            :: 85
            Pseudo Genes (ambiguous residues) :: 0 of 85
            Pseudo Genes (frameshifted)       :: 31 of 85
            Pseudo Genes (incomplete)         :: 66 of 85
            Pseudo Genes (internal stop)      :: 11 of 85
            Pseudo Genes (multiple problems)  :: 20 of 85
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5142584
                     /organism="Enterobacter roggenkampii"
                     /mol_type="genomic DNA"
                     /strain="BK34099"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:1812935"
                     /geo_loc_name="Germany: Heidelberg"
                     /lat_lon="49.40 N 8.69 E"
                     /collection_date="2020-10-10"
                     /collected_by="University Hospital Heidelberg"
WGS         JAFKCK010000001-JAFKCK010000057
WGS_SCAFLD  NZ_JAFKCK010000001-NZ_JAFKCK010000057
//
LOCUS       NZ_JBIHAV010000000   5048042 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E411, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHAV000000000
VERSION     NZ_JBIHAV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235415
            Assembly: GCF_045584955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5048042)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHAV000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHAV000000000.  This version of the project
            (01) has the accession number NZ_JBIHAV010000000, and consists of
            sequences JBIHAV010000001-JBIHAV010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 326x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045584955.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:07:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,861
            CDSs (total)                      :: 4,739
            Genes (coding)                    :: 4,535
            CDSs (with protein)               :: 4,535
            Genes (RNA)                       :: 122
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 204
            CDSs (without protein)            :: 204
            Pseudo Genes (ambiguous residues) :: 0 of 204
            Pseudo Genes (frameshifted)       :: 131 of 204
            Pseudo Genes (incomplete)         :: 94 of 204
            Pseudo Genes (internal stop)      :: 41 of 204
            Pseudo Genes (multiple problems)  :: 55 of 204
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5048042
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E411"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHAV010000001-JBIHAV010000006
WGS_SCAFLD  NZ_JBIHAV010000001-NZ_JBIHAV010000006
//
LOCUS       NZ_DATLJA010000000   3423541 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Desulfitobacterium sp. isolate SMAG_U13683, whole genome
            shotgun sequencing project.
ACCESSION   NZ_DATLJA000000000
VERSION     NZ_DATLJA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37939562
            Sequence Read Archive: SRR8440673
            Assembly: GCF_035539115.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq; TPA:assembly.
SOURCE      Desulfitobacterium sp. (soil metagenome)
  ORGANISM  Desulfitobacterium sp.
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Desulfitobacteriaceae; Desulfitobacterium.
REFERENCE   1  (bases 1 to 3423541)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. doi:
            10.1038/s41467-023-44072-7. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3423541)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            DATLJA000000000.1.
            The Desulfitobacterium sp. whole genome shotgun (WGS) project has
            the project accession NZ_DATLJA000000000.  This version of the
            project (01) has the accession number NZ_DATLJA010000000, and
            consists of sequences DATLJA010000001-DATLJA010000111.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_035539115.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:43:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,435
            CDSs (total)                      :: 3,397
            Genes (coding)                    :: 3,318
            CDSs (with protein)               :: 3,318
            Genes (RNA)                       :: 38
            tRNAs                             :: 35
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 79
            CDSs (without protein)            :: 79
            Pseudo Genes (ambiguous residues) :: 0 of 79
            Pseudo Genes (frameshifted)       :: 21 of 79
            Pseudo Genes (incomplete)         :: 63 of 79
            Pseudo Genes (internal stop)      :: 10 of 79
            Pseudo Genes (multiple problems)  :: 12 of 79
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3423541
                     /organism="Desulfitobacterium sp."
                     /mol_type="genomic DNA"
                     /isolate="SMAG_U13683"
                     /isolation_source="soil"
                     /db_xref="taxon:49981"
                     /environmental_sample
                     /geo_loc_name="Canada: Vancouver, British Columbia"
                     /lat_lon="49.26 N 90.76 W"
                     /metagenome_source="soil metagenome"
                     /metagenomic
WGS         DATLJA010000001-DATLJA010000111
WGS_SCAFLD  NZ_DATLJA010000001-NZ_DATLJA010000111
//
LOCUS       NZ_JBIHCK010000000   5386344 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E354, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHCK000000000
VERSION     NZ_JBIHCK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235363
            Assembly: GCF_045585695.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5386344)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHCK000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHCK000000000.  This version of the project
            (01) has the accession number NZ_JBIHCK010000000, and consists of
            sequences JBIHCK010000001-JBIHCK010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 203x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045585695.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:58:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,196
            CDSs (total)                      :: 5,076
            Genes (coding)                    :: 4,833
            CDSs (with protein)               :: 4,833
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 243
            CDSs (without protein)            :: 243
            Pseudo Genes (ambiguous residues) :: 0 of 243
            Pseudo Genes (frameshifted)       :: 104 of 243
            Pseudo Genes (incomplete)         :: 153 of 243
            Pseudo Genes (internal stop)      :: 50 of 243
            Pseudo Genes (multiple problems)  :: 57 of 243
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5386344
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E354"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHCK010000001-JBIHCK010000005
WGS_SCAFLD  NZ_JBIHCK010000001-NZ_JBIHCK010000005
//
LOCUS       NZ_JBJDLK010000000   3985526 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Elizabethkingia meningoseptica strain WHH, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJDLK000000000
VERSION     NZ_JBJDLK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44598145
            Assembly: GCF_045762675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Elizabethkingia meningoseptica
  ORGANISM  Elizabethkingia meningoseptica
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Weeksellaceae; Elizabethkingia.
REFERENCE   1  (bases 1 to 3985526)
  AUTHORS   Cai,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-NOV-2024) Department of Laboratory Medicine, Enze
            Hospital, Ximen Street, Linhai, Zhejiang 317000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJDLK000000000.1.
            The Elizabethkingia meningoseptica whole genome shotgun (WGS)
            project has the project accession NZ_JBJDLK000000000.  This version
            of the project (01) has the accession number NZ_JBJDLK010000000,
            and consists of sequences JBJDLK010000001-JBJDLK010000025.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: GS De Novo Assembler v. Unicycler v0.4.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045762675.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:25:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,617
            CDSs (total)                      :: 3,567
            Genes (coding)                    :: 3,551
            CDSs (with protein)               :: 3,551
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 3 of 16
            Pseudo Genes (incomplete)         :: 8 of 16
            Pseudo Genes (internal stop)      :: 6 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3985526
                     /organism="Elizabethkingia meningoseptica"
                     /mol_type="genomic DNA"
                     /strain="WHH"
                     /isolation_source="Bronchoalveolar lavage fluid"
                     /host="Homo sapiens"
                     /db_xref="taxon:238"
                     /geo_loc_name="China: Taizhou"
                     /lat_lon="28.6581 N 121.4163 E"
                     /collection_date="2023-06-30"
                     /collected_by="Enze Hospital"
WGS         JBJDLK010000001-JBJDLK010000025
WGS_SCAFLD  NZ_JBJDLK010000001-NZ_JBJDLK010000025
//
LOCUS       NZ_WOWH01000000      2547745 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Cutibacterium acnes strain MIT 1851-a4-2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WOWH00000000
VERSION     NZ_WOWH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13477465
            Assembly: GCF_009737125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Cutibacterium acnes (Propionibacterium acnes)
  ORGANISM  Cutibacterium acnes
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Propionibacteriaceae; Cutibacterium.
REFERENCE   1  (bases 1 to 2547745)
  AUTHORS   Mannion,A., Shen,Z. and Fox,J.G.
  TITLE     Novel microbial thiopeptide modulation of FOXM1 in Helicobacter
            pylori-associated gastric carcinogenesis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2547745)
  AUTHORS   Mannion,A., Shen,Z. and Fox,J.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2019) DCM, MIT, 77 Massachusetts Ave, Cambridge,
            MA 02139, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WOWH00000000.1.
            The Cutibacterium acnes whole genome shotgun (WGS) project has the
            project accession NZ_WOWH00000000.  This version of the project
            (01) has the accession number NZ_WOWH01000000, and consists of
            sequences WOWH01000001-WOWH01000017.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.10.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 32.8x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009737125.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:22:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,485
            CDSs (total)                      :: 2,433
            Genes (coding)                    :: 2,339
            CDSs (with protein)               :: 2,339
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 94
            CDSs (without protein)            :: 94
            Pseudo Genes (ambiguous residues) :: 0 of 94
            Pseudo Genes (frameshifted)       :: 48 of 94
            Pseudo Genes (incomplete)         :: 32 of 94
            Pseudo Genes (internal stop)      :: 28 of 94
            Pseudo Genes (multiple problems)  :: 13 of 94
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2547745
                     /organism="Cutibacterium acnes"
                     /mol_type="genomic DNA"
                     /strain="MIT 1851-a4-2"
                     /isolation_source="human stomach"
                     /host="Homo sapiens"
                     /db_xref="taxon:1747"
                     /geo_loc_name="USA: MIT"
                     /collection_date="2018"
WGS         WOWH01000001-WOWH01000017
WGS_SCAFLD  NZ_WOWH01000001-NZ_WOWH01000017
//
LOCUS       NZ_JBIHDW010000000   5277332 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E983, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHDW000000000
VERSION     NZ_JBIHDW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235310
            Assembly: GCF_045607625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5277332)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHDW000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHDW000000000.  This version of the project
            (01) has the accession number NZ_JBIHDW010000000, and consists of
            sequences JBIHDW010000001-JBIHDW010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 480x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045607625.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:08:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,124
            CDSs (total)                      :: 5,009
            Genes (coding)                    :: 4,685
            CDSs (with protein)               :: 4,685
            Genes (RNA)                       :: 115
            rRNAs                             :: 8, 8, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 324
            CDSs (without protein)            :: 324
            Pseudo Genes (ambiguous residues) :: 0 of 324
            Pseudo Genes (frameshifted)       :: 197 of 324
            Pseudo Genes (incomplete)         :: 162 of 324
            Pseudo Genes (internal stop)      :: 51 of 324
            Pseudo Genes (multiple problems)  :: 71 of 324
            Pseudo Genes (short protein)      :: 1 of 324
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5277332
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E983"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHDW010000001-JBIHDW010000007
WGS_SCAFLD  NZ_JBIHDW010000001-NZ_JBIHDW010000007
//
LOCUS       NZ_JBIHFZ010000000   4713349 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E895, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHFZ000000000
VERSION     NZ_JBIHFZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235236
            Assembly: GCF_045608745.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4713349)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHFZ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHFZ000000000.  This version of the project
            (01) has the accession number NZ_JBIHFZ010000000, and consists of
            sequences JBIHFZ010000001-JBIHFZ010000002.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 201x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045608745.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:49:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,590
            CDSs (total)                      :: 4,476
            Genes (coding)                    :: 4,309
            CDSs (with protein)               :: 4,309
            Genes (RNA)                       :: 114
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 167
            CDSs (without protein)            :: 167
            Pseudo Genes (ambiguous residues) :: 0 of 167
            Pseudo Genes (frameshifted)       :: 91 of 167
            Pseudo Genes (incomplete)         :: 86 of 167
            Pseudo Genes (internal stop)      :: 19 of 167
            Pseudo Genes (multiple problems)  :: 26 of 167
            Pseudo Genes (short protein)      :: 1 of 167
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4713349
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E895"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHFZ010000001-JBIHFZ010000002
WGS_SCAFLD  NZ_JBIHFZ010000001-NZ_JBIHFZ010000002
//
LOCUS       NZ_CDUJLX010000000   2508483 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Croceibacter atlanticus isolate MarMAG_001383, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDUJLX000000000
VERSION     NZ_CDUJLX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120722588
            Assembly: GCF_977521585.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Croceibacter atlanticus (marine metagenome)
  ORGANISM  Croceibacter atlanticus
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Croceibacter.
REFERENCE   1  (bases 1 to 2508483)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDUJLX000000000.1.
            The Croceibacter atlanticus whole genome shotgun (WGS) project has
            the project accession NZ_CDUJLX000000000.  This version of the
            project (01) has the accession number NZ_CDUJLX010000000, and
            consists of sequences CDUJLX010000001-CDUJLX010000292.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977521585.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 01:31:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,570
            CDSs (total)                      :: 2,543
            Genes (coding)                    :: 2,460
            CDSs (with protein)               :: 2,460
            Genes (RNA)                       :: 27
            rRNAs                             :: 1 (23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 22
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 83
            CDSs (without protein)            :: 83
            Pseudo Genes (ambiguous residues) :: 0 of 83
            Pseudo Genes (frameshifted)       :: 5 of 83
            Pseudo Genes (incomplete)         :: 75 of 83
            Pseudo Genes (internal stop)      :: 4 of 83
            Pseudo Genes (multiple problems)  :: 1 of 83
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2508483
                     /organism="Croceibacter atlanticus"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_001383"
                     /isolation_source="Tropical Atlantic Ocean"
                     /db_xref="taxon:313588"
                     /environmental_sample
                     /geo_loc_name="Atlantic Ocean"
                     /collection_date="2012-11-13"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDUJLX010000001-CDUJLX010000292
WGS_SCAFLD  NZ_CDUJLX010000001-NZ_CDUJLX010000292
//
LOCUS       NZ_JAFFSI010000000   5001410 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Enterobacter cloacae subsp. cloacae strain CORE_Ent10, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JAFFSI000000000
VERSION     NZ_JAFFSI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN17928642
            Assembly: GCF_019351635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter cloacae subsp. cloacae
  ORGANISM  Enterobacter cloacae subsp. cloacae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 5001410)
  AUTHORS   Mills,J.P., Rojas,L.J., Marshall,S.H., Rudin,S.D., Hujer,A.M.,
            Nayak,L., Bachman,M.A., Bonomo,R.A. and Kaye,K.S.
  TITLE     Risk Factors for and Mechanisms of COlistin Resistance Among
            Enterobacterales: Getting at the CORE of the Issue
  JOURNAL   Open Forum Infect Dis 8 (7), ofab145 (2021)
   PUBMED   34285928
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5001410)
  AUTHORS   Mills,J.P., Rojas,L.J., Marshall,S.H., Rudin,S.D., Hujer,A.M.,
            Nayak,L., Bachman,M.A., Bonomo,R.A. and Kaye,K.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-FEB-2021) Medicine, Case Western Reserve University,
            10900 Euclid Ave, Cleveland, OH 44106, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAFFSI000000000.1.
            The Enterobacter cloacae subsp. cloacae whole genome shotgun (WGS)
            project has the project accession NZ_JAFFSI000000000.  This version
            of the project (01) has the accession number NZ_JAFFSI010000000,
            and consists of sequences JAFFSI010000001-JAFFSI010000066.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: OCT-2019
            Assembly Method        :: CLC Genomics Workbench v. 20
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 240x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_019351635.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:37:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,803
            CDSs (total)                      :: 4,727
            Genes (coding)                    :: 4,663
            CDSs (with protein)               :: 4,663
            Genes (RNA)                       :: 76
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 64
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 19 of 64
            Pseudo Genes (incomplete)         :: 43 of 64
            Pseudo Genes (internal stop)      :: 14 of 64
            Pseudo Genes (multiple problems)  :: 10 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5001410
                     /organism="Enterobacter cloacae subsp. cloacae"
                     /mol_type="genomic DNA"
                     /strain="CORE_Ent10"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /sub_species="cloacae"
                     /db_xref="taxon:336306"
                     /geo_loc_name="USA: Michigan"
                     /lat_lon="43.6211 N 84.6824 W"
                     /collection_date="2017-02-07"
                     /collected_by="Michigan Medicine"
WGS         JAFFSI010000001-JAFFSI010000066
WGS_SCAFLD  NZ_JAFFSI010000001-NZ_JAFFSI010000066
//
LOCUS       NZ_JBIHGL010000000   5177412 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E874, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHGL000000000
VERSION     NZ_JBIHGL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235218
            Assembly: GCF_045608945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5177412)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHGL000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHGL000000000.  This version of the project
            (01) has the accession number NZ_JBIHGL010000000, and consists of
            sequences JBIHGL010000001-JBIHGL010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 459x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045608945.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:02:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,110
            CDSs (total)                      :: 4,997
            Genes (coding)                    :: 4,690
            CDSs (with protein)               :: 4,690
            Genes (RNA)                       :: 113
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 307
            CDSs (without protein)            :: 307
            Pseudo Genes (ambiguous residues) :: 0 of 307
            Pseudo Genes (frameshifted)       :: 161 of 307
            Pseudo Genes (incomplete)         :: 176 of 307
            Pseudo Genes (internal stop)      :: 35 of 307
            Pseudo Genes (multiple problems)  :: 58 of 307
            Pseudo Genes (short protein)      :: 1 of 307
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5177412
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E874"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHGL010000001-JBIHGL010000007
WGS_SCAFLD  NZ_JBIHGL010000001-NZ_JBIHGL010000007
//
LOCUS       NZ_JBIHIH010000000   5420508 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E804, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHIH000000000
VERSION     NZ_JBIHIH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235158
            Assembly: GCF_045609945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5420508)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHIH000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHIH000000000.  This version of the project
            (01) has the accession number NZ_JBIHIH010000000, and consists of
            sequences JBIHIH010000001-JBIHIH010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 328x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045609945.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:05:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,448
            CDSs (total)                      :: 5,331
            Genes (coding)                    :: 4,951
            CDSs (with protein)               :: 4,951
            Genes (RNA)                       :: 117
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 380
            CDSs (without protein)            :: 380
            Pseudo Genes (ambiguous residues) :: 0 of 380
            Pseudo Genes (frameshifted)       :: 218 of 380
            Pseudo Genes (incomplete)         :: 196 of 380
            Pseudo Genes (internal stop)      :: 48 of 380
            Pseudo Genes (multiple problems)  :: 72 of 380
            Pseudo Genes (short protein)      :: 1 of 380
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5420508
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E804"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHIH010000001-JBIHIH010000004
WGS_SCAFLD  NZ_JBIHIH010000001-NZ_JBIHIH010000004
//
LOCUS       NZ_RPBC01000000      4179530 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Cronobacter sakazakii strain CQ04, whole genome shotgun sequencing
            project.
ACCESSION   NZ_RPBC00000000
VERSION     NZ_RPBC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10273093
            Assembly: GCF_009938825.1
KEYWORDS    WGS; RefSeq.
SOURCE      Cronobacter sakazakii
  ORGANISM  Cronobacter sakazakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Cronobacter.
REFERENCE   1  (bases 1 to 4179530)
  AUTHORS   Cui,J.
  TITLE     Genomics analysis of Putative Virulence Factors on Adhesion and
            Cytotoxicity for Cronobacter spp.
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4179530)
  AUTHORS   Cui,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-NOV-2018) Bacteriology, Capital Institute of
            Pediatrics, Beijing, China, Yaobao, Beijing 100020, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RPBC00000000.1.
            The Cronobacter sakazakii whole genome shotgun (WGS) project has
            the project accession NZ_RPBC00000000.  This version of the project
            (01) has the accession number NZ_RPBC01000000, and consists of
            sequences RPBC01000001-RPBC01000018.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04-r240
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 299x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009938825.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:03:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,960
            CDSs (total)                      :: 3,914
            Genes (coding)                    :: 3,856
            CDSs (with protein)               :: 3,856
            Genes (RNA)                       :: 46
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 2 (5S, 16S)
            tRNAs                             :: 34
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 58
            CDSs (without protein)            :: 58
            Pseudo Genes (ambiguous residues) :: 0 of 58
            Pseudo Genes (frameshifted)       :: 20 of 58
            Pseudo Genes (incomplete)         :: 30 of 58
            Pseudo Genes (internal stop)      :: 10 of 58
            Pseudo Genes (multiple problems)  :: 2 of 58
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4179530
                     /organism="Cronobacter sakazakii"
                     /mol_type="genomic DNA"
                     /strain="CQ04"
                     /isolation_source="food"
                     /db_xref="taxon:28141"
                     /geo_loc_name="China"
                     /collection_date="2012"
                     /collected_by="CDC"
WGS         RPBC01000001-RPBC01000018
WGS_SCAFLD  NZ_RPBC01000001-NZ_RPBC01000018
//
LOCUS       NZ_RPBN01000000      4351745 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Cronobacter malonaticus strain SD11, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RPBN00000000
VERSION     NZ_RPBN00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10273227
            Assembly: GCF_009938655.1
KEYWORDS    WGS; RefSeq.
SOURCE      Cronobacter malonaticus
  ORGANISM  Cronobacter malonaticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Cronobacter.
REFERENCE   1  (bases 1 to 4351745)
  AUTHORS   Cui,J.
  TITLE     Genomics analysis of Putative Virulence Factors on Adhesion and
            Cytotoxicity for Cronobacter spp.
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4351745)
  AUTHORS   Cui,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-NOV-2018) Bacteriology, Capital Institute of
            Pediatrics, Beijing, China, Yaobao, Beijing 100020, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RPBN00000000.1.
            The Cronobacter malonaticus whole genome shotgun (WGS) project has
            the project accession NZ_RPBN00000000.  This version of the project
            (01) has the accession number NZ_RPBN01000000, and consists of
            sequences RPBN01000001-RPBN01000015.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04-r240
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 230x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009938655.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:51:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,130
            CDSs (total)                      :: 4,044
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 86
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 56
            CDSs (without protein)            :: 56
            Pseudo Genes (ambiguous residues) :: 0 of 56
            Pseudo Genes (frameshifted)       :: 18 of 56
            Pseudo Genes (incomplete)         :: 39 of 56
            Pseudo Genes (internal stop)      :: 10 of 56
            Pseudo Genes (multiple problems)  :: 9 of 56
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4351745
                     /organism="Cronobacter malonaticus"
                     /mol_type="genomic DNA"
                     /strain="SD11"
                     /isolation_source="water"
                     /db_xref="taxon:413503"
                     /geo_loc_name="China"
                     /collection_date="2010"
                     /collected_by="CDC"
WGS         RPBN01000001-RPBN01000015
WGS_SCAFLD  NZ_RPBN01000001-NZ_RPBN01000015
//
LOCUS       NZ_WUUO01000000      5488345 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Erwinia rhapontici strain CGMCC1.6978, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WUUO00000000
VERSION     NZ_WUUO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13633008
            Assembly: GCF_009846845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Erwinia rhapontici
  ORGANISM  Erwinia rhapontici
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Erwinia.
REFERENCE   1  (bases 1 to 5488345)
  AUTHORS   Hauben,L., Moore,E.R., Vauterin,L., Steenackers,M., Mergaert,J.,
            Verdonck,L. and Swings,J.
  TITLE     Phylogenetic position of phytopathogens within the
            Enterobacteriaceae
  JOURNAL   Syst Appl Microbiol 21 (3), 384-397 (1998)
   PUBMED   9779605
REFERENCE   2  (bases 1 to 5488345)
  AUTHORS   Ge,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-DEC-2019) State Key Laboratory of Infection Disease
            Prevention and Control, Chinese Center for Disease Control and
            Prevention, 155 Changbai Road, Beijing, Beijing 102206, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WUUO00000000.1.
            The Erwinia rhapontici whole genome shotgun (WGS) project has the
            project accession NZ_WUUO00000000.  This version of the project
            (01) has the accession number NZ_WUUO01000000, and consists of
            sequences WUUO01000001-WUUO01000030.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: HGAP v. 3.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009846845.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:02:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,230
            CDSs (total)                      :: 5,130
            Genes (coding)                    :: 5,032
            CDSs (with protein)               :: 5,032
            Genes (RNA)                       :: 100
            rRNAs                             :: 9, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 98
            CDSs (without protein)            :: 98
            Pseudo Genes (ambiguous residues) :: 0 of 98
            Pseudo Genes (frameshifted)       :: 29 of 98
            Pseudo Genes (incomplete)         :: 77 of 98
            Pseudo Genes (internal stop)      :: 22 of 98
            Pseudo Genes (multiple problems)  :: 25 of 98
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5488345
                     /organism="Erwinia rhapontici"
                     /mol_type="genomic DNA"
                     /strain="CGMCC1.6978"
                     /host="plant"
                     /db_xref="taxon:55212"
                     /geo_loc_name="Germany"
                     /collection_date="1924"
WGS         WUUO01000001-WUUO01000030
WGS_SCAFLD  NZ_WUUO01000001-NZ_WUUO01000030
//
LOCUS       NZ_JAKNTW010000000  10827354 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Dolomitihabitans soli strain KLBMP 9127, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAKNTW000000000
VERSION     NZ_JAKNTW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN25691076
            Assembly: GCF_022213955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Dolomitihabitans soli
  ORGANISM  Dolomitihabitans soli
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Streptosporangiaceae; Dolomitihabitans.
REFERENCE   1  (bases 1 to 10827354)
  AUTHORS   Yao,J.
  TITLE     Streptosporangium minutum sp. nov., isolated from garden soil
            exposed to microwave radiation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 10827354)
  AUTHORS   Yao,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2022) Key Laboratory for Biotechnology on
            Medicinal Plants of Jiangsu Province, Jiangsu Normal University,
            101 Shanghai Road, Xuzhou, Jiangsu 221000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAKNTW000000000.1.
            The Dolomitihabitans soli whole genome shotgun (WGS) project has
            the project accession NZ_JAKNTW000000000.  This version of the
            project (01) has the accession number NZ_JAKNTW010000000, and
            consists of sequences JAKNTW010000001-JAKNTW010000082.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: flye v. v2.5; CANU v. v1.7.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 432.0x
            Sequencing Technology  :: Illumina NovaSeq; PacBio Sequel
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_022213955.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:04:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 9,859
            CDSs (total)                      :: 9,784
            Genes (coding)                    :: 9,672
            CDSs (with protein)               :: 9,672
            Genes (RNA)                       :: 75
            rRNAs                             :: 6, 6, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 5 (5S, 16S)
            tRNAs                             :: 59
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 112
            CDSs (without protein)            :: 112
            Pseudo Genes (ambiguous residues) :: 0 of 112
            Pseudo Genes (frameshifted)       :: 21 of 112
            Pseudo Genes (incomplete)         :: 108 of 112
            Pseudo Genes (internal stop)      :: 3 of 112
            Pseudo Genes (multiple problems)  :: 18 of 112
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10827354
                     /organism="Dolomitihabitans soli"
                     /mol_type="genomic DNA"
                     /strain="KLBMP 9127"
                     /isolation_source="garden soil exposed to microwave
                     radiation"
                     /type_material="type strain of Streptosporangium soli"
                     /db_xref="taxon:2916433"
                     /geo_loc_name="China: Guizhou"
                     /collection_date="2020-10"
WGS         JAKNTW010000001-JAKNTW010000082
WGS_SCAFLD  NZ_JAKNTW010000001-NZ_JAKNTW010000082
//
LOCUS       NZ_RPBA01000000      4684392 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Cronobacter dublinensis strain BJ09, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RPBA00000000
VERSION     NZ_RPBA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10266043
            Assembly: GCF_009938875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Cronobacter dublinensis
  ORGANISM  Cronobacter dublinensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Cronobacter.
REFERENCE   1  (bases 1 to 4684392)
  AUTHORS   Cui,J.
  TITLE     Genomics analysis of Putative Virulence Factors on Adhesion and
            Cytotoxicity for Cronobacter spp.
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4684392)
  AUTHORS   Cui,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-NOV-2018) Bacteriology, Capital Institute of
            Pediatrics, Beijing, China, Yaobao, Beijing 100020, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RPBA00000000.1.
            The Cronobacter dublinensis whole genome shotgun (WGS) project has
            the project accession NZ_RPBA00000000.  This version of the project
            (01) has the accession number NZ_RPBA01000000, and consists of
            sequences RPBA01000001-RPBA01000047.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04-r240
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 271x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009938875.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:51:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,592
            CDSs (total)                      :: 4,503
            Genes (coding)                    :: 4,352
            CDSs (with protein)               :: 4,352
            Genes (RNA)                       :: 89
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 1, 2 (5S, 16S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 151
            CDSs (without protein)            :: 151
            Pseudo Genes (ambiguous residues) :: 0 of 151
            Pseudo Genes (frameshifted)       :: 52 of 151
            Pseudo Genes (incomplete)         :: 130 of 151
            Pseudo Genes (internal stop)      :: 23 of 151
            Pseudo Genes (multiple problems)  :: 41 of 151
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4684392
                     /organism="Cronobacter dublinensis"
                     /mol_type="genomic DNA"
                     /strain="BJ09"
                     /isolation_source="food"
                     /db_xref="taxon:413497"
                     /geo_loc_name="China"
                     /collection_date="2007"
                     /collected_by="CDC"
WGS         RPBA01000001-RPBA01000047
WGS_SCAFLD  NZ_RPBA01000001-NZ_RPBA01000047
//
LOCUS       NZ_JAXCWN010000000   3616055 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Curtobacterium sp. CFBP9011, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAXCWN000000000
VERSION     NZ_JAXCWN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN38288756
            Assembly: GCF_034045095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Curtobacterium sp. CFBP9011
  ORGANISM  Curtobacterium sp. CFBP9011
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Curtobacterium.
REFERENCE   1  (bases 1 to 3616055)
  AUTHORS   Arnault,G., Marais,C., Preveaux,A., Briand,M., Poisson,A.S.,
            Sarniguet,A., Barret,M. and Simonin,M.
  TITLE     Seedling microbiota engineering using bacterial synthetic community
            inoculation on seeds
  JOURNAL   FEMS Microbiol Ecol 100 (4) (2024)
   PUBMED   38503562
  REMARK    Erratum:[FEMS Microbiol Ecol. 2024 May 14;100(6):fiae065. doi:
            10.1093/femsec/fiae065. PMID: 38748655]
REFERENCE   2  (bases 1 to 3616055)
  AUTHORS   Arnault,G., Marais,C., Preveaux,A., Briand,M., Poisson,A.S.,
            Sarniguet,A., Barret,M. and Simonin,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2023) SPE, INRAE, rue Georges Morel, Beaucouze
            49071, France
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAXCWN000000000.1.
            The Curtobacterium sp. CFBP9011 whole genome shotgun (WGS) project
            has the project accession NZ_JAXCWN000000000.  This version of the
            project (01) has the accession number NZ_JAXCWN010000000, and
            consists of sequences JAXCWN010000001-JAXCWN010000018.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: JAN-2022
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 331.834088486325x
            Sequencing Technology  :: DNBseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_034045095.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:48:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,480
            CDSs (total)                      :: 3,425
            Genes (coding)                    :: 3,408
            CDSs (with protein)               :: 3,408
            Genes (RNA)                       :: 55
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 17
            CDSs (without protein)            :: 17
            Pseudo Genes (ambiguous residues) :: 0 of 17
            Pseudo Genes (frameshifted)       :: 2 of 17
            Pseudo Genes (incomplete)         :: 16 of 17
            Pseudo Genes (internal stop)      :: 0 of 17
            Pseudo Genes (multiple problems)  :: 1 of 17
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3616055
                     /organism="Curtobacterium sp. CFBP9011"
                     /mol_type="genomic DNA"
                     /strain="CFBP9011"
                     /isolation_source="seedling"
                     /host="Phaseolus vulgaris"
                     /culture_collection="CIRM-CFBP:CFBP9011"
                     /db_xref="taxon:3096530"
                     /geo_loc_name="France: Brain sur l'Authion,
                     Maine-et-Loire"
                     /collection_date="2021-01"
                     /genotype="Bea Vezer"
WGS         JAXCWN010000001-JAXCWN010000018
WGS_SCAFLD  NZ_JAXCWN010000001-NZ_JAXCWN010000018
//
LOCUS       NZ_RPBO01000000      4582981 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Cronobacter malonaticus strain SD16, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RPBO00000000
VERSION     NZ_RPBO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10273231
            Assembly: GCF_009938605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Cronobacter malonaticus
  ORGANISM  Cronobacter malonaticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Cronobacter.
REFERENCE   1  (bases 1 to 4582981)
  AUTHORS   Cui,J.
  TITLE     Genomics analysis of Putative Virulence Factors on Adhesion and
            Cytotoxicity for Cronobacter spp.
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4582981)
  AUTHORS   Cui,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-NOV-2018) Bacteriology, Capital Institute of
            Pediatrics, Beijing, China, Yaobao, Beijing 100020, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RPBO00000000.1.
            The Cronobacter malonaticus whole genome shotgun (WGS) project has
            the project accession NZ_RPBO00000000.  This version of the project
            (01) has the accession number NZ_RPBO01000000, and consists of
            sequences RPBO01000001-RPBO01000032.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04-r240
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 219x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009938605.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:04:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,446
            CDSs (total)                      :: 4,347
            Genes (coding)                    :: 4,283
            CDSs (with protein)               :: 4,283
            Genes (RNA)                       :: 99
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 78
            ncRNAs                            :: 17
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 23 of 64
            Pseudo Genes (incomplete)         :: 38 of 64
            Pseudo Genes (internal stop)      :: 10 of 64
            Pseudo Genes (multiple problems)  :: 6 of 64
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4582981
                     /organism="Cronobacter malonaticus"
                     /mol_type="genomic DNA"
                     /strain="SD16"
                     /isolation_source="water"
                     /db_xref="taxon:413503"
                     /geo_loc_name="China"
                     /collection_date="2010"
                     /collected_by="CDC"
WGS         RPBO01000001-RPBO01000032
WGS_SCAFLD  NZ_RPBO01000001-NZ_RPBO01000032
//
LOCUS       NZ_JBIHCP010000000   5273201 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1033, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHCP000000000
VERSION     NZ_JBIHCP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235353
            Assembly: GCF_045606965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5273201)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHCP000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHCP000000000.  This version of the project
            (01) has the accession number NZ_JBIHCP010000000, and consists of
            sequences JBIHCP010000001-JBIHCP010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 331x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045606965.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:58:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,209
            CDSs (total)                      :: 5,088
            Genes (coding)                    :: 4,827
            CDSs (with protein)               :: 4,827
            Genes (RNA)                       :: 121
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 90
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 261
            CDSs (without protein)            :: 261
            Pseudo Genes (ambiguous residues) :: 0 of 261
            Pseudo Genes (frameshifted)       :: 142 of 261
            Pseudo Genes (incomplete)         :: 112 of 261
            Pseudo Genes (internal stop)      :: 38 of 261
            Pseudo Genes (multiple problems)  :: 29 of 261
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5273201
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1033"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHCP010000001-JBIHCP010000007
WGS_SCAFLD  NZ_JBIHCP010000001-NZ_JBIHCP010000007
//
LOCUS       NZ_RPBV01000000      4444328 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Cronobacter sakazakii strain XJ02, whole genome shotgun sequencing
            project.
ACCESSION   NZ_RPBV00000000
VERSION     NZ_RPBV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10274206
            Assembly: GCF_009938505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Cronobacter sakazakii
  ORGANISM  Cronobacter sakazakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Cronobacter.
REFERENCE   1  (bases 1 to 4444328)
  AUTHORS   Cui,J.
  TITLE     Genomics analysis of Putative Virulence Factors on Adhesion and
            Cytotoxicity for Cronobacter spp.
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4444328)
  AUTHORS   Cui,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-NOV-2018) Bacteriology, Capital Institute of
            Pediatrics, Beijing, China, Yaobao, Beijing 100020, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RPBV00000000.1.
            The Cronobacter sakazakii whole genome shotgun (WGS) project has
            the project accession NZ_RPBV00000000.  This version of the project
            (01) has the accession number NZ_RPBV01000000, and consists of
            sequences RPBV01000001-RPBV01000027.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04-r240
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 283x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009938505.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:48:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,187
            CDSs (total)                      :: 4,123
            Genes (coding)                    :: 4,056
            CDSs (with protein)               :: 4,056
            Genes (RNA)                       :: 64
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 53
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 26 of 67
            Pseudo Genes (incomplete)         :: 36 of 67
            Pseudo Genes (internal stop)      :: 11 of 67
            Pseudo Genes (multiple problems)  :: 6 of 67
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4444328
                     /organism="Cronobacter sakazakii"
                     /mol_type="genomic DNA"
                     /strain="XJ02"
                     /isolation_source="food"
                     /db_xref="taxon:28141"
                     /geo_loc_name="China"
                     /collection_date="2012"
                     /collected_by="CDC"
WGS         RPBV01000001-RPBV01000027
WGS_SCAFLD  NZ_RPBV01000001-NZ_RPBV01000027
//
LOCUS       NZ_JBIHDM010000000   5222330 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1000, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHDM000000000
VERSION     NZ_JBIHDM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235325
            Assembly: GCF_045607385.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5222330)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHDM000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHDM000000000.  This version of the project
            (01) has the accession number NZ_JBIHDM010000000, and consists of
            sequences JBIHDM010000001-JBIHDM010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 126x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045607385.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:08:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,113
            CDSs (total)                      :: 4,991
            Genes (coding)                    :: 4,787
            CDSs (with protein)               :: 4,787
            Genes (RNA)                       :: 122
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 204
            CDSs (without protein)            :: 204
            Pseudo Genes (ambiguous residues) :: 0 of 204
            Pseudo Genes (frameshifted)       :: 104 of 204
            Pseudo Genes (incomplete)         :: 117 of 204
            Pseudo Genes (internal stop)      :: 29 of 204
            Pseudo Genes (multiple problems)  :: 41 of 204
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5222330
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1000"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHDM010000001-JBIHDM010000005
WGS_SCAFLD  NZ_JBIHDM010000001-NZ_JBIHDM010000005
//
LOCUS       NZ_VLKB01000000     11404784 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Dulcicalothrix desertica PCC 7102, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VLKB00000000
VERSION     NZ_VLKB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05660789
            Assembly: GCF_007830875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Dulcicalothrix desertica PCC 7102 (Dulcicalothrix desertica PCC
            7192)
  ORGANISM  Dulcicalothrix desertica PCC 7102
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Calotrichaceae; Dulcicalothrix.
REFERENCE   1  (bases 1 to 11404784)
  AUTHORS   Kerfeld,C.
  TITLE     Geba-pcc
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 11404784)
  AUTHORS   Kerfeld,C., Huntemann,M., Clum,A., Pillay,M., Palaniappan,K.,
            Varghese,N., Mikhailova,N., Stamatis,D., Reddy,T., Daum,C.,
            Shapiro,N., Ivanova,N., Kyrpides,N. and Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-JUL-2019) Prokaryotic Super Group, DOE Joint Genome
            Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VLKB00000000.1.
            The Dulcicalothrix desertica PCC 7102 whole genome shotgun (WGS)
            project has the project accession NZ_VLKB00000000.  This version of
            the project (01) has the accession number NZ_VLKB01000000, and
            consists of sequences VLKB01000001-VLKB01000010.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Newbler v. 2.5-internal-10Apr08
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 141.0x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007830875.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:02:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 10,477
            CDSs (total)                      :: 10,389
            Genes (coding)                    :: 10,072
            CDSs (with protein)               :: 10,072
            Genes (RNA)                       :: 88
            rRNAs                             :: 5, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 3, 1 (5S, 16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 317
            CDSs (without protein)            :: 317
            Pseudo Genes (ambiguous residues) :: 0 of 317
            Pseudo Genes (frameshifted)       :: 94 of 317
            Pseudo Genes (incomplete)         :: 242 of 317
            Pseudo Genes (internal stop)      :: 39 of 317
            Pseudo Genes (multiple problems)  :: 52 of 317
            CRISPR Arrays                     :: 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11404784
                     /organism="Dulcicalothrix desertica PCC 7102"
                     /mol_type="genomic DNA"
                     /strain="PCC 7102"
                     /type_material="type strain of Calothrix desertica"
                     /db_xref="taxon:232991"
                     /geo_loc_name="Chile:La Portado, Antofagasta, Chile"
                     /lat_lon="23.628991 S 70.372898 W"
WGS         VLKB01000001-VLKB01000010
WGS_SCAFLD  NZ_VLKB01000001-NZ_VLKB01000010
//
LOCUS       NZ_RPBK01000000      4364976 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Cronobacter sakazakii strain SC25, whole genome shotgun sequencing
            project.
ACCESSION   NZ_RPBK00000000
VERSION     NZ_RPBK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10273135
            Assembly: GCF_009938715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Cronobacter sakazakii
  ORGANISM  Cronobacter sakazakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Cronobacter.
REFERENCE   1  (bases 1 to 4364976)
  AUTHORS   Cui,J.
  TITLE     Genomics analysis of Putative Virulence Factors on Adhesion and
            Cytotoxicity for Cronobacter spp.
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4364976)
  AUTHORS   Cui,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-NOV-2018) Bacteriology, Capital Institute of
            Pediatrics, Beijing, China, Yaobao, Beijing 100020, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RPBK00000000.1.
            The Cronobacter sakazakii whole genome shotgun (WGS) project has
            the project accession NZ_RPBK00000000.  This version of the project
            (01) has the accession number NZ_RPBK01000000, and consists of
            sequences RPBK01000001-RPBK01000020.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04-r240
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 288x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009938715.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:55:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,088
            CDSs (total)                      :: 4,005
            Genes (coding)                    :: 3,972
            CDSs (with protein)               :: 3,972
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 69
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 33
            CDSs (without protein)            :: 33
            Pseudo Genes (ambiguous residues) :: 0 of 33
            Pseudo Genes (frameshifted)       :: 6 of 33
            Pseudo Genes (incomplete)         :: 24 of 33
            Pseudo Genes (internal stop)      :: 7 of 33
            Pseudo Genes (multiple problems)  :: 4 of 33
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4364976
                     /organism="Cronobacter sakazakii"
                     /mol_type="genomic DNA"
                     /strain="SC25"
                     /isolation_source="food"
                     /db_xref="taxon:28141"
                     /geo_loc_name="China"
                     /collection_date="2010"
                     /collected_by="CDC"
WGS         RPBK01000001-RPBK01000020
WGS_SCAFLD  NZ_RPBK01000001-NZ_RPBK01000020
//
LOCUS       NZ_JBIHHH010000000   5002924 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E846, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHHH000000000
VERSION     NZ_JBIHHH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235193
            Assembly: GCF_045609385.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5002924)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHHH000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHHH000000000.  This version of the project
            (01) has the accession number NZ_JBIHHH010000000, and consists of
            sequences JBIHHH010000001-JBIHHH010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 154x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045609385.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:03:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,958
            CDSs (total)                      :: 4,845
            Genes (coding)                    :: 4,608
            CDSs (with protein)               :: 4,608
            Genes (RNA)                       :: 113
            rRNAs                             :: 7, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 237
            CDSs (without protein)            :: 237
            Pseudo Genes (ambiguous residues) :: 0 of 237
            Pseudo Genes (frameshifted)       :: 117 of 237
            Pseudo Genes (incomplete)         :: 119 of 237
            Pseudo Genes (internal stop)      :: 32 of 237
            Pseudo Genes (multiple problems)  :: 30 of 237
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5002924
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E846"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHHH010000001-JBIHHH010000006
WGS_SCAFLD  NZ_JBIHHH010000001-NZ_JBIHHH010000006
//
LOCUS       NZ_RPBH01000000      4253538 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Cronobacter malonaticus strain SC01, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RPBH00000000
VERSION     NZ_RPBH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10273134
            Assembly: GCF_009938735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Cronobacter malonaticus
  ORGANISM  Cronobacter malonaticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Cronobacter.
REFERENCE   1  (bases 1 to 4253538)
  AUTHORS   Cui,J.
  TITLE     Genomics analysis of Putative Virulence Factors on Adhesion and
            Cytotoxicity for Cronobacter spp.
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4253538)
  AUTHORS   Cui,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-NOV-2018) Bacteriology, Capital Institute of
            Pediatrics, Beijing, China, Yaobao, Beijing 100020, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RPBH00000000.1.
            The Cronobacter malonaticus whole genome shotgun (WGS) project has
            the project accession NZ_RPBH00000000.  This version of the project
            (01) has the accession number NZ_RPBH01000000, and consists of
            sequences RPBH01000001-RPBH01000030.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04-r240
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 292x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009938735.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:49:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,109
            CDSs (total)                      :: 4,014
            Genes (coding)                    :: 3,956
            CDSs (with protein)               :: 3,956
            Genes (RNA)                       :: 95
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 74
            ncRNAs                            :: 16
            Pseudo Genes (total)              :: 58
            CDSs (without protein)            :: 58
            Pseudo Genes (ambiguous residues) :: 0 of 58
            Pseudo Genes (frameshifted)       :: 21 of 58
            Pseudo Genes (incomplete)         :: 38 of 58
            Pseudo Genes (internal stop)      :: 8 of 58
            Pseudo Genes (multiple problems)  :: 8 of 58
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4253538
                     /organism="Cronobacter malonaticus"
                     /mol_type="genomic DNA"
                     /strain="SC01"
                     /isolation_source="food"
                     /db_xref="taxon:413503"
                     /geo_loc_name="China"
                     /collection_date="2010"
                     /collected_by="CDC"
WGS         RPBH01000001-RPBH01000030
WGS_SCAFLD  NZ_RPBH01000001-NZ_RPBH01000030
//
LOCUS       NZ_RPBF01000000      4360301 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Cronobacter sakazakii strain LN01, whole genome shotgun sequencing
            project.
ACCESSION   NZ_RPBF00000000
VERSION     NZ_RPBF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10273132
            Assembly: GCF_009938835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Cronobacter sakazakii
  ORGANISM  Cronobacter sakazakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Cronobacter.
REFERENCE   1  (bases 1 to 4360301)
  AUTHORS   Cui,J.
  TITLE     Genomics analysis of Putative Virulence Factors on Adhesion and
            Cytotoxicity for Cronobacter spp.
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4360301)
  AUTHORS   Cui,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-NOV-2018) Bacteriology, Capital Institute of
            Pediatrics, Beijing, China, Yaobao, Beijing 100020, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RPBF00000000.1.
            The Cronobacter sakazakii whole genome shotgun (WGS) project has
            the project accession NZ_RPBF00000000.  This version of the project
            (01) has the accession number NZ_RPBF01000000, and consists of
            sequences RPBF01000001-RPBF01000049.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04-r240
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 230x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009938835.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:00:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,127
            CDSs (total)                      :: 4,040
            Genes (coding)                    :: 3,988
            CDSs (with protein)               :: 3,988
            Genes (RNA)                       :: 87
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 73
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 9 of 52
            Pseudo Genes (incomplete)         :: 38 of 52
            Pseudo Genes (internal stop)      :: 7 of 52
            Pseudo Genes (multiple problems)  :: 2 of 52
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4360301
                     /organism="Cronobacter sakazakii"
                     /mol_type="genomic DNA"
                     /strain="LN01"
                     /isolation_source="food"
                     /db_xref="taxon:28141"
                     /geo_loc_name="China"
                     /collection_date="2006"
                     /collected_by="CDC"
WGS         RPBF01000001-RPBF01000049
WGS_SCAFLD  NZ_RPBF01000001-NZ_RPBF01000049
//
LOCUS       NZ_JBIHIV010000000   5681470 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E780, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHIV000000000
VERSION     NZ_JBIHIV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235137
            Assembly: GCF_045610205.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5681470)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHIV000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHIV000000000.  This version of the project
            (01) has the accession number NZ_JBIHIV010000000, and consists of
            sequences JBIHIV010000001-JBIHIV010000017.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 165x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045610205.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:10:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,531
            CDSs (total)                      :: 5,421
            Genes (coding)                    :: 5,098
            CDSs (with protein)               :: 5,098
            Genes (RNA)                       :: 110
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 323
            CDSs (without protein)            :: 323
            Pseudo Genes (ambiguous residues) :: 0 of 323
            Pseudo Genes (frameshifted)       :: 186 of 323
            Pseudo Genes (incomplete)         :: 165 of 323
            Pseudo Genes (internal stop)      :: 49 of 323
            Pseudo Genes (multiple problems)  :: 64 of 323
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5681470
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E780"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHIV010000001-JBIHIV010000017
WGS_SCAFLD  NZ_JBIHIV010000001-NZ_JBIHIV010000017
//
LOCUS       NZ_JABTDM010000000   2860093 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Enterococcus faecalis strain HC_NS0442, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JABTDM000000000
VERSION     NZ_JABTDM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13999820
            Assembly: GCF_013248735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2860093)
  AUTHORS   Zaheer,R., Cook,S.R., Barbieri,R., Goji,N., Cameron,A., Petkau,A.,
            Polo,R.O., Tymensen,L., Stamm,C., Song,J., Hannon,S., Jones,T.,
            Church,D., Booker,C.W., Amoako,K., Van Domselaar,G., Read,R.R. and
            McAllister,T.A.
  TITLE     Surveillance of Enterococcus spp. reveals distinct species and
            antimicrobial resistance diversity across a One-Health continuum
  JOURNAL   Sci Rep 10 (1), 3937 (2020)
   PUBMED   32127598
  REMARK    Erratum:[Sci Rep. 2020 Aug 4;10(1):13401. doi:
            10.1038/s41598-020-69044-5. PMID: 32747642]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2860093)
  AUTHORS   Zaheer,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-JUN-2020) Agriculture and Agri-Food Canada,
            Lethbridge Research and Development Centre, 5403 1st Ave S,
            Lethbridge, Alberta T1J 4P4, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JABTDM000000000.1.
            The Enterococcus faecalis whole genome shotgun (WGS) project has
            the project accession NZ_JABTDM000000000.  This version of the
            project (01) has the accession number NZ_JABTDM010000000, and
            consists of sequences JABTDM010000001-JABTDM010000062.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 32.296x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013248735.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:35:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,865
            CDSs (total)                      :: 2,800
            Genes (coding)                    :: 2,689
            CDSs (with protein)               :: 2,689
            Genes (RNA)                       :: 65
            rRNAs                             :: 3, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 34 of 111
            Pseudo Genes (incomplete)         :: 64 of 111
            Pseudo Genes (internal stop)      :: 29 of 111
            Pseudo Genes (multiple problems)  :: 14 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2860093
                     /organism="Enterococcus faecalis"
                     /mol_type="genomic DNA"
                     /strain="HC_NS0442"
                     /host="Homo sapiens"
                     /db_xref="taxon:1351"
                     /geo_loc_name="Canada: Alberta"
                     /collection_date="2015"
WGS         JABTDM010000001-JABTDM010000062
WGS_SCAFLD  NZ_JABTDM010000001-NZ_JABTDM010000062
//
LOCUS       NZ_JBWBZP010000000   2685231 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Enterococcus faecalis strain VT-H2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWBZP000000000
VERSION     NZ_JBWBZP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56514189
            Assembly: GCF_056175565.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterococcus faecalis
  ORGANISM  Enterococcus faecalis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Enterococcaceae; Enterococcus.
REFERENCE   1  (bases 1 to 2685231)
  AUTHORS   Suphawakron,C., Woraruthai,T., Tirapanampai,C., Punthong,P.,
            Kruasuwan,W., Wongsurawat,T., Jenjaroenpun,P. and Wongnate,T.
  TITLE     Genome-Resolved Characterization of Enterococcus faecalis VT-H2
            Reveals Enhanced Lignocellulose Utilization and Hydrogen Production
            from Palm Oil Mill Effluent
  JOURNAL   Int J Hydrogen Energy (2026) In press
REFERENCE   2  (bases 1 to 2685231)
  AUTHORS   Wongnate,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-MAR-2026) Biomolecular Science and Engineering (BSE),
            Vidyasirimedhi Institute of Science and Technology (VISTEC), 555
            Moo. 1Pai Yup Nai Subdistrict, Wang Chan District, Rayong 21210,
            Thailand
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBZP000000000.1.
            The Enterococcus faecalis whole genome shotgun (WGS) project has
            the project accession NZ_JBWBZP000000000.  This version of the
            project (01) has the accession number NZ_JBWBZP010000000, and
            consists of sequence JBWBZP010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2021
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 786.0x
            Sequencing Technology  :: Illumina; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056175565.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:36:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,542
            CDSs (total)                      :: 2,468
            Genes (coding)                    :: 2,456
            CDSs (with protein)               :: 2,456
            Genes (RNA)                       :: 74
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 3 of 12
            Pseudo Genes (incomplete)         :: 5 of 12
            Pseudo Genes (internal stop)      :: 5 of 12
            Pseudo Genes (multiple problems)  :: 1 of 12
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2685231
                     /organism="Enterococcus faecalis"
                     /mol_type="genomic DNA"
                     /strain="VT-H2"
                     /isolation_source="palm oil mill effluent (POME)"
                     /db_xref="taxon:1351"
                     /geo_loc_name="Thailand: Rayong"
                     /collection_date="2020"
WGS         JBWBZP010000001
WGS_SCAFLD  NZ_CM149698
//
LOCUS       NZ_RPBE01000000      4474572 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Cronobacter sakazakii strain HE35, whole genome shotgun sequencing
            project.
ACCESSION   NZ_RPBE00000000
VERSION     NZ_RPBE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10273119
            Assembly: GCF_009938805.1
KEYWORDS    WGS; RefSeq.
SOURCE      Cronobacter sakazakii
  ORGANISM  Cronobacter sakazakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Cronobacter.
REFERENCE   1  (bases 1 to 4474572)
  AUTHORS   Cui,J.
  TITLE     Genomics analysis of Putative Virulence Factors on Adhesion and
            Cytotoxicity for Cronobacter spp.
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4474572)
  AUTHORS   Cui,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-NOV-2018) Bacteriology, Capital Institute of
            Pediatrics, Beijing, China, Yaobao, Beijing 100020, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RPBE00000000.1.
            The Cronobacter sakazakii whole genome shotgun (WGS) project has
            the project accession NZ_RPBE00000000.  This version of the project
            (01) has the accession number NZ_RPBE01000000, and consists of
            sequences RPBE01000001-RPBE01000020.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04-r240
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 224x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009938805.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:06:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,300
            CDSs (total)                      :: 4,211
            Genes (coding)                    :: 4,148
            CDSs (with protein)               :: 4,148
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 76
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 11 of 63
            Pseudo Genes (incomplete)         :: 50 of 63
            Pseudo Genes (internal stop)      :: 9 of 63
            Pseudo Genes (multiple problems)  :: 5 of 63
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4474572
                     /organism="Cronobacter sakazakii"
                     /mol_type="genomic DNA"
                     /strain="HE35"
                     /isolation_source="food"
                     /db_xref="taxon:28141"
                     /geo_loc_name="China"
                     /collection_date="2012"
                     /collected_by="CDC"
WGS         RPBE01000001-RPBE01000020
WGS_SCAFLD  NZ_RPBE01000001-NZ_RPBE01000020
//
LOCUS       NZ_JBBYIX010000000   5110154 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 609R1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBBYIX000000000
VERSION     NZ_JBBYIX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40936327
            Assembly: GCF_045909255.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5110154)
  AUTHORS   Xu,J., Liu,J., Zhao,J., Tian,T., Wang,M., Yuan,G., Peng,Y.,
            Zhang,Y., Li,Z., Kan,B., Li,Z. and Lu,X.
  TITLE     Clonal and horizontal transmission of carbapenem-resistant
            Enterobacterales strains and genes via flies
  JOURNAL   Gut Pathog 16 (1), 70 (2024)
   PUBMED   39550588
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5110154)
  AUTHORS   Liu,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2024) Chinese Center for Disease Control and
            Prevention, 155, Beijing 102200, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBYIX000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBBYIX000000000.  This version of the project
            (01) has the accession number NZ_JBBYIX010000000, and consists of
            sequences JBBYIX010000001-JBBYIX010000010.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2018
            Assembly Method        :: Unicycler v. 1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina; Oxford Nanopore GridION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045909255.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 14:06:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,985
            CDSs (total)                      :: 4,866
            Genes (coding)                    :: 4,684
            CDSs (with protein)               :: 4,684
            Genes (RNA)                       :: 119
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 182
            CDSs (without protein)            :: 182
            Pseudo Genes (ambiguous residues) :: 0 of 182
            Pseudo Genes (frameshifted)       :: 60 of 182
            Pseudo Genes (incomplete)         :: 110 of 182
            Pseudo Genes (internal stop)      :: 39 of 182
            Pseudo Genes (multiple problems)  :: 25 of 182
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5110154
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="609R1"
                     /host="fly"
                     /db_xref="taxon:562"
                     /geo_loc_name="China: Henan"
                     /collection_date="2018"
WGS         JBBYIX010000001-JBBYIX010000010
WGS_SCAFLD  NZ_JBBYIX010000001-NZ_JBBYIX010000010
//
LOCUS       NZ_RPBL01000000      4585199 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Cronobacter sakazakii strain SD04, whole genome shotgun sequencing
            project.
ACCESSION   NZ_RPBL00000000
VERSION     NZ_RPBL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10273208
            Assembly: GCF_009938685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Cronobacter sakazakii
  ORGANISM  Cronobacter sakazakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Cronobacter.
REFERENCE   1  (bases 1 to 4585199)
  AUTHORS   Cui,J.
  TITLE     Genomics analysis of Putative Virulence Factors on Adhesion and
            Cytotoxicity for Cronobacter spp.
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4585199)
  AUTHORS   Cui,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-NOV-2018) Bacteriology, Capital Institute of
            Pediatrics, Beijing, China, Yaobao, Beijing 100020, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RPBL00000000.1.
            The Cronobacter sakazakii whole genome shotgun (WGS) project has
            the project accession NZ_RPBL00000000.  This version of the project
            (01) has the accession number NZ_RPBL01000000, and consists of
            sequences RPBL01000001-RPBL01000033.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04-r240
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 275x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009938685.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:56:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,336
            CDSs (total)                      :: 4,269
            Genes (coding)                    :: 4,201
            CDSs (with protein)               :: 4,201
            Genes (RNA)                       :: 67
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 18 of 68
            Pseudo Genes (incomplete)         :: 43 of 68
            Pseudo Genes (internal stop)      :: 11 of 68
            Pseudo Genes (multiple problems)  :: 4 of 68
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4585199
                     /organism="Cronobacter sakazakii"
                     /mol_type="genomic DNA"
                     /strain="SD04"
                     /isolation_source="spice"
                     /db_xref="taxon:28141"
                     /geo_loc_name="China"
                     /collection_date="2010"
                     /collected_by="CDC"
WGS         RPBL01000001-RPBL01000033
WGS_SCAFLD  NZ_RPBL01000001-NZ_RPBL01000033
//
LOCUS       NZ_CEVKRJ010000000   5187768 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Enterobacter hormaechei isolate 01768031, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CEVKRJ000000000
VERSION     NZ_CEVKRJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA121972433
            Assembly: GCF_982303565.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter hormaechei
  ORGANISM  Enterobacter hormaechei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter
            cloacae complex.
REFERENCE   1  (bases 1 to 5187768)
  AUTHORS   Day,M., Rodrigues,C. and Williams,D.
  CONSRTM   OPS, AMRHAI, UKHSA
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAR-2026) UKHSA, Opportunistic Pathogens Section, 61
            Colindale Avenue, London, NW9 5EQ, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CEVKRJ000000000.1.
            The Enterobacter hormaechei whole genome shotgun (WGS) project has
            the project accession NZ_CEVKRJ000000000.  This version of the
            project (01) has the accession number NZ_CEVKRJ010000000, and
            consists of sequences CEVKRJ010000001-CEVKRJ010000279.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_982303565.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:39:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,114
            CDSs (total)                      :: 5,030
            Genes (coding)                    :: 4,925
            CDSs (with protein)               :: 4,925
            Genes (RNA)                       :: 84
            rRNAs                             :: 3, 4, 14 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 4, 14 (5S, 16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 29 of 105
            Pseudo Genes (incomplete)         :: 82 of 105
            Pseudo Genes (internal stop)      :: 11 of 105
            Pseudo Genes (multiple problems)  :: 16 of 105
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5187768
                     /organism="Enterobacter hormaechei"
                     /mol_type="genomic DNA"
                     /isolate="01768031"
                     /db_xref="taxon:158836"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2025"
WGS         CEVKRJ010000001-CEVKRJ010000279
WGS_SCAFLD  NZ_CEVKRJ010000001-NZ_CEVKRJ010000279
//
LOCUS       NZ_RPBS01000000      4412098 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Cronobacter dublinensis strain SD28, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RPBS00000000
VERSION     NZ_RPBS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10274157
            Assembly: GCF_009938535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Cronobacter dublinensis
  ORGANISM  Cronobacter dublinensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Cronobacter.
REFERENCE   1  (bases 1 to 4412098)
  AUTHORS   Cui,J.
  TITLE     Genomics analysis of Putative Virulence Factors on Adhesion and
            Cytotoxicity for Cronobacter spp.
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4412098)
  AUTHORS   Cui,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-NOV-2018) Bacteriology, Capital Institute of
            Pediatrics, Beijing, China, Yaobao, Beijing 100020, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RPBS00000000.1.
            The Cronobacter dublinensis whole genome shotgun (WGS) project has
            the project accession NZ_RPBS00000000.  This version of the project
            (01) has the accession number NZ_RPBS01000000, and consists of
            sequences RPBS01000001-RPBS01000021.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04-r240
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 227x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009938535.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:48:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,157
            CDSs (total)                      :: 4,070
            Genes (coding)                    :: 4,010
            CDSs (with protein)               :: 4,010
            Genes (RNA)                       :: 87
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 60
            CDSs (without protein)            :: 60
            Pseudo Genes (ambiguous residues) :: 0 of 60
            Pseudo Genes (frameshifted)       :: 21 of 60
            Pseudo Genes (incomplete)         :: 40 of 60
            Pseudo Genes (internal stop)      :: 8 of 60
            Pseudo Genes (multiple problems)  :: 8 of 60
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4412098
                     /organism="Cronobacter dublinensis"
                     /mol_type="genomic DNA"
                     /strain="SD28"
                     /isolation_source="water"
                     /db_xref="taxon:413497"
                     /geo_loc_name="China"
                     /collection_date="2010"
                     /collected_by="CDC"
WGS         RPBS01000001-RPBS01000021
WGS_SCAFLD  NZ_RPBS01000001-NZ_RPBS01000021
//
LOCUS       NZ_RPBJ01000000      4626870 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Cronobacter sakazakii strain SC16, whole genome shotgun sequencing
            project.
ACCESSION   NZ_RPBJ00000000
VERSION     NZ_RPBJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10273198
            Assembly: GCF_009938705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Cronobacter sakazakii
  ORGANISM  Cronobacter sakazakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Cronobacter.
REFERENCE   1  (bases 1 to 4626870)
  AUTHORS   Cui,J.
  TITLE     Genomics analysis of Putative Virulence Factors on Adhesion and
            Cytotoxicity for Cronobacter spp.
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4626870)
  AUTHORS   Cui,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-NOV-2018) Bacteriology, Capital Institute of
            Pediatrics, Beijing, China, Yaobao, Beijing 100020, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RPBJ00000000.1.
            The Cronobacter sakazakii whole genome shotgun (WGS) project has
            the project accession NZ_RPBJ00000000.  This version of the project
            (01) has the accession number NZ_RPBJ01000000, and consists of
            sequences RPBJ01000001-RPBJ01000042.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04-r240
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 272x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009938705.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:59:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,477
            CDSs (total)                      :: 4,427
            Genes (coding)                    :: 4,329
            CDSs (with protein)               :: 4,329
            Genes (RNA)                       :: 50
            rRNAs                             :: 2, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 40
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 98
            CDSs (without protein)            :: 98
            Pseudo Genes (ambiguous residues) :: 0 of 98
            Pseudo Genes (frameshifted)       :: 36 of 98
            Pseudo Genes (incomplete)         :: 66 of 98
            Pseudo Genes (internal stop)      :: 9 of 98
            Pseudo Genes (multiple problems)  :: 12 of 98
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4626870
                     /organism="Cronobacter sakazakii"
                     /mol_type="genomic DNA"
                     /strain="SC16"
                     /isolation_source="food"
                     /db_xref="taxon:28141"
                     /geo_loc_name="China"
                     /collection_date="2011"
                     /collected_by="CDC"
WGS         RPBJ01000001-RPBJ01000042
WGS_SCAFLD  NZ_RPBJ01000001-NZ_RPBJ01000042
//
LOCUS       NZ_RPBI01000000      4551289 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Cronobacter sakazakii strain SC26, whole genome shotgun sequencing
            project.
ACCESSION   NZ_RPBI00000000
VERSION     NZ_RPBI00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10273204
            Assembly: GCF_009938765.1
KEYWORDS    WGS; RefSeq.
SOURCE      Cronobacter sakazakii
  ORGANISM  Cronobacter sakazakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Cronobacter.
REFERENCE   1  (bases 1 to 4551289)
  AUTHORS   Cui,J.
  TITLE     Genomics analysis of Putative Virulence Factors on Adhesion and
            Cytotoxicity for Cronobacter spp.
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4551289)
  AUTHORS   Cui,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-NOV-2018) Bacteriology, Capital Institute of
            Pediatrics, Beijing, China, Yaobao, Beijing 100020, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RPBI00000000.1.
            The Cronobacter sakazakii whole genome shotgun (WGS) project has
            the project accession NZ_RPBI00000000.  This version of the project
            (01) has the accession number NZ_RPBI01000000, and consists of
            sequences RPBI01000001-RPBI01000041.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04-r240
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 273x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009938765.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:08:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,309
            CDSs (total)                      :: 4,259
            Genes (coding)                    :: 4,198
            CDSs (with protein)               :: 4,198
            Genes (RNA)                       :: 50
            rRNAs                             :: 2, 1, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 1, 4 (5S, 16S, 23S)
            tRNAs                             :: 36
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 61
            CDSs (without protein)            :: 61
            Pseudo Genes (ambiguous residues) :: 0 of 61
            Pseudo Genes (frameshifted)       :: 20 of 61
            Pseudo Genes (incomplete)         :: 43 of 61
            Pseudo Genes (internal stop)      :: 2 of 61
            Pseudo Genes (multiple problems)  :: 3 of 61
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4551289
                     /organism="Cronobacter sakazakii"
                     /mol_type="genomic DNA"
                     /strain="SC26"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:28141"
                     /geo_loc_name="China"
                     /collection_date="2015"
                     /collected_by="CDC"
WGS         RPBI01000001-RPBI01000041
WGS_SCAFLD  NZ_RPBI01000001-NZ_RPBI01000041
//
LOCUS       NZ_JBBXMS010000000   5060648 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 578R3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBBXMS000000000
VERSION     NZ_JBBXMS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40926221
            Assembly: GCF_045909175.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5060648)
  AUTHORS   Xu,J., Liu,J., Zhao,J., Tian,T., Wang,M., Yuan,G., Peng,Y.,
            Zhang,Y., Li,Z., Kan,B., Li,Z. and Lu,X.
  TITLE     Clonal and horizontal transmission of carbapenem-resistant
            Enterobacterales strains and genes via flies
  JOURNAL   Gut Pathog 16 (1), 70 (2024)
   PUBMED   39550588
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5060648)
  AUTHORS   Liu,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2024) Chinese Center for Disease Control and
            Prevention, 155, Beijing 102200, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBXMS000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBBXMS000000000.  This version of the project
            (01) has the accession number NZ_JBBXMS010000000, and consists of
            sequences JBBXMS010000001-JBBXMS010000102.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2018
            Assembly Method        :: Unicycler v. 1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina; Oxford Nanopore GridION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045909175.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 14:11:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,020
            CDSs (total)                      :: 4,938
            Genes (coding)                    :: 4,771
            CDSs (with protein)               :: 4,771
            Genes (RNA)                       :: 82
            rRNAs                             :: 2, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 1, 3 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 167
            CDSs (without protein)            :: 167
            Pseudo Genes (ambiguous residues) :: 0 of 167
            Pseudo Genes (frameshifted)       :: 44 of 167
            Pseudo Genes (incomplete)         :: 113 of 167
            Pseudo Genes (internal stop)      :: 35 of 167
            Pseudo Genes (multiple problems)  :: 22 of 167
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5060648
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="578R3"
                     /isolation_source="isolate from fly samples"
                     /db_xref="taxon:562"
                     /geo_loc_name="China: Henan"
                     /collection_date="2018"
WGS         JBBXMS010000001-JBBXMS010000102
WGS_SCAFLD  NZ_JBBXMS010000001-NZ_JBBXMS010000102
//
LOCUS       NZ_RPAZ01000000      4414097 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Cronobacter sakazakii strain AH02, whole genome shotgun sequencing
            project.
ACCESSION   NZ_RPAZ00000000
VERSION     NZ_RPAZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10266033
            Assembly: GCF_009938885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Cronobacter sakazakii
  ORGANISM  Cronobacter sakazakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Cronobacter.
REFERENCE   1  (bases 1 to 4414097)
  AUTHORS   Cui,J.
  TITLE     Genomics analysis of Putative Virulence Factors on Adhesion and
            Cytotoxicity for Cronobacter spp.
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4414097)
  AUTHORS   Cui,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-NOV-2018) Bacteriology, Capital Institute of
            Pediatrics, Beijing, China, Yaobao, Beijing 100020, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RPAZ00000000.1.
            The Cronobacter sakazakii whole genome shotgun (WGS) project has
            the project accession NZ_RPAZ00000000.  This version of the project
            (01) has the accession number NZ_RPAZ01000000, and consists of
            sequences RPAZ01000001-RPAZ01000023.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04-r240
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 295x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009938885.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:56:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,168
            CDSs (total)                      :: 4,085
            Genes (coding)                    :: 4,055
            CDSs (with protein)               :: 4,055
            Genes (RNA)                       :: 83
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 67
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 30
            CDSs (without protein)            :: 30
            Pseudo Genes (ambiguous residues) :: 0 of 30
            Pseudo Genes (frameshifted)       :: 7 of 30
            Pseudo Genes (incomplete)         :: 22 of 30
            Pseudo Genes (internal stop)      :: 6 of 30
            Pseudo Genes (multiple problems)  :: 4 of 30
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4414097
                     /organism="Cronobacter sakazakii"
                     /mol_type="genomic DNA"
                     /strain="AH02"
                     /isolation_source="food"
                     /db_xref="taxon:28141"
                     /geo_loc_name="China"
                     /collection_date="2012"
                     /collected_by="CDC"
WGS         RPAZ01000001-RPAZ01000023
WGS_SCAFLD  NZ_RPAZ01000001-NZ_RPAZ01000023
//
LOCUS       NZ_RPBP01000000      4406034 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Cronobacter sakazakii strain SD19, whole genome shotgun sequencing
            project.
ACCESSION   NZ_RPBP00000000
VERSION     NZ_RPBP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10273238
            Assembly: GCF_009938585.1
KEYWORDS    WGS; RefSeq.
SOURCE      Cronobacter sakazakii
  ORGANISM  Cronobacter sakazakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Cronobacter.
REFERENCE   1  (bases 1 to 4406034)
  AUTHORS   Cui,J.
  TITLE     Genomics analysis of Putative Virulence Factors on Adhesion and
            Cytotoxicity for Cronobacter spp.
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4406034)
  AUTHORS   Cui,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-NOV-2018) Bacteriology, Capital Institute of
            Pediatrics, Beijing, China, Yaobao, Beijing 100020, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RPBP00000000.1.
            The Cronobacter sakazakii whole genome shotgun (WGS) project has
            the project accession NZ_RPBP00000000.  This version of the project
            (01) has the accession number NZ_RPBP01000000, and consists of
            sequences RPBP01000001-RPBP01000020.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04-r240
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 290x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009938585.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:51:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,124
            CDSs (total)                      :: 4,045
            Genes (coding)                    :: 4,000
            CDSs (with protein)               :: 4,000
            Genes (RNA)                       :: 79
            rRNAs                             :: 1, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 45
            CDSs (without protein)            :: 45
            Pseudo Genes (ambiguous residues) :: 0 of 45
            Pseudo Genes (frameshifted)       :: 11 of 45
            Pseudo Genes (incomplete)         :: 34 of 45
            Pseudo Genes (internal stop)      :: 9 of 45
            Pseudo Genes (multiple problems)  :: 7 of 45
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4406034
                     /organism="Cronobacter sakazakii"
                     /mol_type="genomic DNA"
                     /strain="SD19"
                     /isolation_source="water"
                     /db_xref="taxon:28141"
                     /geo_loc_name="China"
                     /collection_date="2010"
                     /collected_by="CDC"
WGS         RPBP01000001-RPBP01000020
WGS_SCAFLD  NZ_RPBP01000001-NZ_RPBP01000020
//
LOCUS       NZ_RPBG01000000      4350287 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Cronobacter sakazakii strain LN02, whole genome shotgun sequencing
            project.
ACCESSION   NZ_RPBG00000000
VERSION     NZ_RPBG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10273133
            Assembly: GCF_009938785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Cronobacter sakazakii
  ORGANISM  Cronobacter sakazakii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Cronobacter.
REFERENCE   1  (bases 1 to 4350287)
  AUTHORS   Cui,J.
  TITLE     Genomics analysis of Putative Virulence Factors on Adhesion and
            Cytotoxicity for Cronobacter spp.
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4350287)
  AUTHORS   Cui,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-NOV-2018) Bacteriology, Capital Institute of
            Pediatrics, Beijing, China, Yaobao, Beijing 100020, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RPBG00000000.1.
            The Cronobacter sakazakii whole genome shotgun (WGS) project has
            the project accession NZ_RPBG00000000.  This version of the project
            (01) has the accession number NZ_RPBG01000000, and consists of
            sequences RPBG01000001-RPBG01000016.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04-r240
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 231x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009938785.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:57:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,109
            CDSs (total)                      :: 4,018
            Genes (coding)                    :: 3,972
            CDSs (with protein)               :: 3,972
            Genes (RNA)                       :: 91
            rRNAs                             :: 2, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 3, 2 (16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 13 of 46
            Pseudo Genes (incomplete)         :: 31 of 46
            Pseudo Genes (internal stop)      :: 11 of 46
            Pseudo Genes (multiple problems)  :: 7 of 46
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4350287
                     /organism="Cronobacter sakazakii"
                     /mol_type="genomic DNA"
                     /strain="LN02"
                     /isolation_source="food"
                     /db_xref="taxon:28141"
                     /geo_loc_name="China"
                     /collection_date="2006"
                     /collected_by="CDC"
WGS         RPBG01000001-RPBG01000016
WGS_SCAFLD  NZ_RPBG01000001-NZ_RPBG01000016
//
LOCUS       NZ_JBAHVH010000000   2270154 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Corynebacterium sanguinis strain PCR6, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBAHVH000000000
VERSION     NZ_JBAHVH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN39854124
            Assembly: GCF_037465145.1
KEYWORDS    WGS; RefSeq.
SOURCE      Corynebacterium sanguinis
  ORGANISM  Corynebacterium sanguinis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Corynebacteriaceae; Corynebacterium.
REFERENCE   1  (bases 1 to 2270154)
  AUTHORS   Naqvi,M.
  TITLE     Whole genome sequencing and characterization of Corynebacterium
            isolated from the ocular surface of dry eye disease sufferers
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2270154)
  AUTHORS   Naqvi,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-FEB-2024) Pharmacy, OsloMet, Pilestredet 46, Oslo
            0167, Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAHVH000000000.1.
            The Corynebacterium sanguinis whole genome shotgun (WGS) project
            has the project accession NZ_JBAHVH000000000.  This version of the
            project (01) has the accession number NZ_JBAHVH010000000, and
            consists of sequences JBAHVH010000001-JBAHVH010000059.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 144x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037465145.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:32:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,205
            CDSs (total)                      :: 2,141
            Genes (coding)                    :: 2,098
            CDSs (with protein)               :: 2,098
            Genes (RNA)                       :: 64
            rRNAs                             :: 2, 3, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 2, 5 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 43
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 43
            Pseudo Genes (frameshifted)       :: 18 of 43
            Pseudo Genes (incomplete)         :: 26 of 43
            Pseudo Genes (internal stop)      :: 6 of 43
            Pseudo Genes (multiple problems)  :: 7 of 43
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2270154
                     /organism="Corynebacterium sanguinis"
                     /mol_type="genomic DNA"
                     /strain="PCR6"
                     /isolation_source="Tear sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:2594913"
                     /geo_loc_name="Norway: Oslo"
                     /collection_date="2022-10"
                     /collected_by="Oslo Metropolitan University"
WGS         JBAHVH010000001-JBAHVH010000059
WGS_SCAFLD  NZ_JBAHVH010000001-NZ_JBAHVH010000059
//
LOCUS       NZ_RPBB01000000      4368795 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Cronobacter malonaticus strain BJ15, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RPBB00000000
VERSION     NZ_RPBB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10266044
            Assembly: GCF_009938865.1
KEYWORDS    WGS; RefSeq.
SOURCE      Cronobacter malonaticus
  ORGANISM  Cronobacter malonaticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Cronobacter.
REFERENCE   1  (bases 1 to 4368795)
  AUTHORS   Cui,J.
  TITLE     Genomics analysis of Putative Virulence Factors on Adhesion and
            Cytotoxicity for Cronobacter spp.
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4368795)
  AUTHORS   Cui,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-NOV-2018) Bacteriology, Capital Institute of
            Pediatrics, Beijing, China, Yaobao, Beijing 100020, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RPBB00000000.1.
            The Cronobacter malonaticus whole genome shotgun (WGS) project has
            the project accession NZ_RPBB00000000.  This version of the project
            (01) has the accession number NZ_RPBB01000000, and consists of
            sequences RPBB01000001-RPBB01000034.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04-r240
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 288x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009938865.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:52:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,256
            CDSs (total)                      :: 4,158
            Genes (coding)                    :: 4,073
            CDSs (with protein)               :: 4,073
            Genes (RNA)                       :: 98
            rRNAs                             :: 2, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 3, 2 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 85
            CDSs (without protein)            :: 85
            Pseudo Genes (ambiguous residues) :: 0 of 85
            Pseudo Genes (frameshifted)       :: 21 of 85
            Pseudo Genes (incomplete)         :: 65 of 85
            Pseudo Genes (internal stop)      :: 10 of 85
            Pseudo Genes (multiple problems)  :: 10 of 85
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4368795
                     /organism="Cronobacter malonaticus"
                     /mol_type="genomic DNA"
                     /strain="BJ15"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:413503"
                     /geo_loc_name="China"
                     /collection_date="2013"
                     /collected_by="CDC"
WGS         RPBB01000001-RPBB01000034
WGS_SCAFLD  NZ_RPBB01000001-NZ_RPBB01000034
//
LOCUS       NZ_CDVONT010000000   3277216 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Dietzia maris isolate MarMAG_051684, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CDVONT000000000
VERSION     NZ_CDVONT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737346
            Assembly: GCF_977731615.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Dietzia maris (marine metagenome)
  ORGANISM  Dietzia maris
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Dietziaceae; Dietzia.
REFERENCE   1  (bases 1 to 3277216)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVONT000000000.1.
            The Dietzia maris whole genome shotgun (WGS) project has the
            project accession NZ_CDVONT000000000.  This version of the project
            (01) has the accession number NZ_CDVONT010000000, and consists of
            sequences CDVONT010000001-CDVONT010000248.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977731615.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:28:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,244
            CDSs (total)                      :: 3,197
            Genes (coding)                    :: 3,105
            CDSs (with protein)               :: 3,105
            Genes (RNA)                       :: 47
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 4 of 92
            Pseudo Genes (incomplete)         :: 87 of 92
            Pseudo Genes (internal stop)      :: 4 of 92
            Pseudo Genes (multiple problems)  :: 3 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3277216
                     /organism="Dietzia maris"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_051684"
                     /isolation_source="Mariana Trench, particle-associated
                     microorganism abyssal water (4,000 m)"
                     /db_xref="taxon:37915"
                     /environmental_sample
                     /geo_loc_name="Pacific Ocean"
                     /collection_date="2016-09-15"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVONT010000001-CDVONT010000248
WGS_SCAFLD  NZ_CDVONT010000001-NZ_CDVONT010000248
//
LOCUS       NZ_JBBXMV010000000   4948625 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 548B3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBBXMV000000000
VERSION     NZ_JBBXMV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40926202
            Assembly: GCF_045909195.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4948625)
  AUTHORS   Xu,J., Liu,J., Zhao,J., Tian,T., Wang,M., Yuan,G., Peng,Y.,
            Zhang,Y., Li,Z., Kan,B., Li,Z. and Lu,X.
  TITLE     Clonal and horizontal transmission of carbapenem-resistant
            Enterobacterales strains and genes via flies
  JOURNAL   Gut Pathog 16 (1), 70 (2024)
   PUBMED   39550588
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4948625)
  AUTHORS   Liu,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2024) Chinese Center for Disease Control and
            Prevention, 155, Beijing 102200, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBXMV000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBBXMV000000000.  This version of the project
            (01) has the accession number NZ_JBBXMV010000000, and consists of
            sequences JBBXMV010000001-JBBXMV010000073.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2018
            Assembly Method        :: Unicycler v. 1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina; Oxford Nanopore GridION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045909195.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:58:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,865
            CDSs (total)                      :: 4,745
            Genes (coding)                    :: 4,529
            CDSs (with protein)               :: 4,529
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 216
            CDSs (without protein)            :: 216
            Pseudo Genes (ambiguous residues) :: 0 of 216
            Pseudo Genes (frameshifted)       :: 85 of 216
            Pseudo Genes (incomplete)         :: 121 of 216
            Pseudo Genes (internal stop)      :: 38 of 216
            Pseudo Genes (multiple problems)  :: 23 of 216
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4948625
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="548B3"
                     /isolation_source="isolate from fly samples"
                     /db_xref="taxon:562"
                     /geo_loc_name="China: Henan"
                     /collection_date="2018"
WGS         JBBXMV010000001-JBBXMV010000073
WGS_SCAFLD  NZ_JBBXMV010000001-NZ_JBBXMV010000073
//
LOCUS       NZ_RPBW01000000      4631679 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Cronobacter dublinensis strain SX10, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RPBW00000000
VERSION     NZ_RPBW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10274204
            Assembly: GCF_009938525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Cronobacter dublinensis
  ORGANISM  Cronobacter dublinensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Cronobacter.
REFERENCE   1  (bases 1 to 4631679)
  AUTHORS   Cui,J.
  TITLE     Genomics analysis of Putative Virulence Factors on Adhesion and
            Cytotoxicity for Cronobacter spp.
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4631679)
  AUTHORS   Cui,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-NOV-2018) Bacteriology, Capital Institute of
            Pediatrics, Beijing, China, Yaobao, Beijing 100020, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RPBW00000000.1.
            The Cronobacter dublinensis whole genome shotgun (WGS) project has
            the project accession NZ_RPBW00000000.  This version of the project
            (01) has the accession number NZ_RPBW01000000, and consists of
            sequences RPBW01000001-RPBW01000031.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04-r240
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 268x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009938525.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:55:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,420
            CDSs (total)                      :: 4,351
            Genes (coding)                    :: 4,275
            CDSs (with protein)               :: 4,275
            Genes (RNA)                       :: 69
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 22 of 76
            Pseudo Genes (incomplete)         :: 52 of 76
            Pseudo Genes (internal stop)      :: 15 of 76
            Pseudo Genes (multiple problems)  :: 11 of 76
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4631679
                     /organism="Cronobacter dublinensis"
                     /mol_type="genomic DNA"
                     /strain="SX10"
                     /isolation_source="food"
                     /db_xref="taxon:413497"
                     /geo_loc_name="China"
                     /collection_date="2016"
                     /collected_by="CDC"
WGS         RPBW01000001-RPBW01000031
WGS_SCAFLD  NZ_RPBW01000001-NZ_RPBW01000031
//
LOCUS       NZ_RPBM01000000      4475278 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Cronobacter dublinensis strain SD05, whole genome shotgun
            sequencing project.
ACCESSION   NZ_RPBM00000000
VERSION     NZ_RPBM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10273225
            Assembly: GCF_009938635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Cronobacter dublinensis
  ORGANISM  Cronobacter dublinensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Cronobacter.
REFERENCE   1  (bases 1 to 4475278)
  AUTHORS   Cui,J.
  TITLE     Genomics analysis of Putative Virulence Factors on Adhesion and
            Cytotoxicity for Cronobacter spp.
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4475278)
  AUTHORS   Cui,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-NOV-2018) Bacteriology, Capital Institute of
            Pediatrics, Beijing, China, Yaobao, Beijing 100020, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            RPBM00000000.1.
            The Cronobacter dublinensis whole genome shotgun (WGS) project has
            the project accession NZ_RPBM00000000.  This version of the project
            (01) has the accession number NZ_RPBM01000000, and consists of
            sequences RPBM01000001-RPBM01000018.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04-r240
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 281x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009938635.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:04:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,268
            CDSs (total)                      :: 4,224
            Genes (coding)                    :: 4,156
            CDSs (with protein)               :: 4,156
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 33
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 16 of 68
            Pseudo Genes (incomplete)         :: 57 of 68
            Pseudo Genes (internal stop)      :: 4 of 68
            Pseudo Genes (multiple problems)  :: 9 of 68
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4475278
                     /organism="Cronobacter dublinensis"
                     /mol_type="genomic DNA"
                     /strain="SD05"
                     /isolation_source="plant"
                     /db_xref="taxon:413497"
                     /geo_loc_name="China"
                     /collection_date="2010"
                     /collected_by="CDC"
WGS         RPBM01000001-RPBM01000018
WGS_SCAFLD  NZ_RPBM01000001-NZ_RPBM01000018
//
LOCUS       NZ_JBBYIU010000000   5103438 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 604R, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBBYIU000000000
VERSION     NZ_JBBYIU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40936248
            Assembly: GCF_045909235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5103438)
  AUTHORS   Xu,J., Liu,J., Zhao,J., Tian,T., Wang,M., Yuan,G., Peng,Y.,
            Zhang,Y., Li,Z., Kan,B., Li,Z. and Lu,X.
  TITLE     Clonal and horizontal transmission of carbapenem-resistant
            Enterobacterales strains and genes via flies
  JOURNAL   Gut Pathog 16 (1), 70 (2024)
   PUBMED   39550588
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5103438)
  AUTHORS   Liu,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2024) Chinese Center for Disease Control and
            Prevention, 155, Beijing 102200, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBYIU000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBBYIU000000000.  This version of the project
            (01) has the accession number NZ_JBBYIU010000000, and consists of
            sequences JBBYIU010000001-JBBYIU010000135.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2018
            Assembly Method        :: Unicycler v. 1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina; Oxford Nanopore GridION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045909235.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 14:00:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,109
            CDSs (total)                      :: 4,990
            Genes (coding)                    :: 4,762
            CDSs (with protein)               :: 4,762
            Genes (RNA)                       :: 119
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 228
            CDSs (without protein)            :: 228
            Pseudo Genes (ambiguous residues) :: 0 of 228
            Pseudo Genes (frameshifted)       :: 75 of 228
            Pseudo Genes (incomplete)         :: 160 of 228
            Pseudo Genes (internal stop)      :: 36 of 228
            Pseudo Genes (multiple problems)  :: 39 of 228
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5103438
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="604R"
                     /host="fly"
                     /db_xref="taxon:562"
                     /geo_loc_name="China: Henan"
                     /collection_date="2018"
WGS         JBBYIU010000001-JBBYIU010000135
WGS_SCAFLD  NZ_JBBYIU010000001-NZ_JBBYIU010000135
//
LOCUS       NZ_JBWBUY010000000   5767092 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Cytobacillus sp. QJM3NY_8, whole genome shotgun sequencing project.
ACCESSION   NZ_JBWBUY000000000
VERSION     NZ_JBWBUY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449753
            Assembly: GCF_056173585.1
KEYWORDS    WGS; RefSeq.
SOURCE      Cytobacillus sp. QJM3NY_8
  ORGANISM  Cytobacillus sp. QJM3NY_8
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Cytobacillus.
REFERENCE   1  (bases 1 to 5767092)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5767092)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBUY000000000.1.
            The Cytobacillus sp. QJM3NY_8 whole genome shotgun (WGS) project
            has the project accession NZ_JBWBUY000000000.  This version of the
            project (01) has the accession number NZ_JBWBUY010000000, and
            consists of sequences JBWBUY010000001-JBWBUY010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 89.9x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173585.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 18:47:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,873
            CDSs (total)                      :: 5,723
            Genes (coding)                    :: 5,633
            CDSs (with protein)               :: 5,633
            Genes (RNA)                       :: 150
            rRNAs                             :: 12, 12, 12 (5S, 16S, 23S)
            complete rRNAs                    :: 12, 12, 12 (5S, 16S, 23S)
            tRNAs                             :: 108
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 90
            CDSs (without protein)            :: 90
            Pseudo Genes (ambiguous residues) :: 0 of 90
            Pseudo Genes (frameshifted)       :: 42 of 90
            Pseudo Genes (incomplete)         :: 53 of 90
            Pseudo Genes (internal stop)      :: 18 of 90
            Pseudo Genes (multiple problems)  :: 18 of 90
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5767092
                     /organism="Cytobacillus sp. QJM3NY_8"
                     /mol_type="genomic DNA"
                     /strain="QJM3NY_8"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569813"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBUY010000001-JBWBUY010000004
WGS_SCAFLD  NZ_CM149681
WGS_SCAFLD  NZ_JBWBUY010000002-NZ_JBWBUY010000004
//
LOCUS       NZ_JBJLXX010000000   4936684 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 219 D3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLXX000000000
VERSION     NZ_JBJLXX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114948
            Assembly: GCF_045799845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4936684)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLXX000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLXX000000000.  This version of the project
            (01) has the accession number NZ_JBJLXX010000000, and consists of
            sequences JBJLXX010000001-JBJLXX010000188.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799845.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,960
            CDSs (total)                      :: 4,858
            Genes (coding)                    :: 4,597
            CDSs (with protein)               :: 4,597
            Genes (RNA)                       :: 102
            rRNAs                             :: 4, 3, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 3, 5 (5S, 16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 261
            CDSs (without protein)            :: 261
            Pseudo Genes (ambiguous residues) :: 0 of 261
            Pseudo Genes (frameshifted)       :: 70 of 261
            Pseudo Genes (incomplete)         :: 195 of 261
            Pseudo Genes (internal stop)      :: 47 of 261
            Pseudo Genes (multiple problems)  :: 43 of 261
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4936684
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="219 D3"
                     /isolation_source="Peritoneal hematoma"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2019-06-11"
WGS         JBJLXX010000001-JBJLXX010000188
WGS_SCAFLD  NZ_JBJLXX010000001-NZ_JBJLXX010000188
//
LOCUS       NZ_JARTZI010000000   4696537 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 511419-22, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JARTZI000000000
VERSION     NZ_JARTZI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34004163
            Assembly: GCF_045795885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4696537)
  AUTHORS   Irimaso,E., Keinprecht,H., Szostak,M.P., Cabal Rosel,A., Stessl,B.,
            Desvars-Larrive,A., Ntakirutimana,C., Masengesho,G., Fischer,O.W.,
            Wittek,T., Mueller,E., Fessler,A.T., Braun,S.F., Schwarz,S.,
            Monecke,S., Ehricht,R., Spergser,J., Ruppitsch,W. and Loncaric,I.
  TITLE     Presence of broad-spectrum cephalosporin-resistant Enterobacterales
            isolated from ruminants in Rwanda
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4696537)
  AUTHORS   Szostak,M.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-MAR-2023) Department of Pathobiology, Institute of
            Microbiology, Veterinary University Vienna, Veterinaerplatz 1,
            Vienna 1210, Austria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARTZI000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JARTZI000000000.  This version of the project
            (01) has the accession number NZ_JARTZI010000000, and consists of
            sequences JARTZI010000001-JARTZI010000385.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 49x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795885.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:51:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,703
            CDSs (total)                      :: 4,609
            Genes (coding)                    :: 4,320
            CDSs (with protein)               :: 4,320
            Genes (RNA)                       :: 94
            rRNAs                             :: 3, 4, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 4, 6 (5S, 16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 17
            Pseudo Genes (total)              :: 289
            CDSs (without protein)            :: 289
            Pseudo Genes (ambiguous residues) :: 0 of 289
            Pseudo Genes (frameshifted)       :: 94 of 289
            Pseudo Genes (incomplete)         :: 206 of 289
            Pseudo Genes (internal stop)      :: 35 of 289
            Pseudo Genes (multiple problems)  :: 41 of 289
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4696537
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="511419-22"
                     /host="cattle"
                     /db_xref="taxon:562"
                     /geo_loc_name="Rwanda: Musanze"
                     /collection_date="2021"
                     /collected_by="Helga Keinprecht"
WGS         JARTZI010000001-JARTZI010000385
WGS_SCAFLD  NZ_JARTZI010000001-NZ_JARTZI010000385
//
LOCUS       NZ_JARUAB010000000   4946207 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 511400-22, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JARUAB000000000
VERSION     NZ_JARUAB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34004144
            Assembly: GCF_045796385.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4946207)
  AUTHORS   Irimaso,E., Keinprecht,H., Szostak,M.P., Cabal Rosel,A., Stessl,B.,
            Desvars-Larrive,A., Ntakirutimana,C., Masengesho,G., Fischer,O.W.,
            Wittek,T., Mueller,E., Fessler,A.T., Braun,S.F., Schwarz,S.,
            Monecke,S., Ehricht,R., Spergser,J., Ruppitsch,W. and Loncaric,I.
  TITLE     Presence of broad-spectrum cephalosporin-resistant Enterobacterales
            isolated from ruminants in Rwanda
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4946207)
  AUTHORS   Szostak,M.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-MAR-2023) Department of Pathobiology, Institute of
            Microbiology, Veterinary University Vienna, Veterinaerplatz 1,
            Vienna 1210, Austria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARUAB000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JARUAB000000000.  This version of the project
            (01) has the accession number NZ_JARUAB010000000, and consists of
            sequences JARUAB010000001-JARUAB010000276.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 71x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045796385.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:10:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,820
            CDSs (total)                      :: 4,731
            Genes (coding)                    :: 4,551
            CDSs (with protein)               :: 4,551
            Genes (RNA)                       :: 89
            rRNAs                             :: 2, 5, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 5, 6 (16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 180
            CDSs (without protein)            :: 180
            Pseudo Genes (ambiguous residues) :: 0 of 180
            Pseudo Genes (frameshifted)       :: 48 of 180
            Pseudo Genes (incomplete)         :: 136 of 180
            Pseudo Genes (internal stop)      :: 15 of 180
            Pseudo Genes (multiple problems)  :: 20 of 180
            Pseudo Genes (short protein)      :: 1 of 180
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4946207
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="511400-22"
                     /host="cattle"
                     /db_xref="taxon:562"
                     /geo_loc_name="Rwanda: Musanze"
                     /collection_date="2021"
                     /collected_by="Helga Keinprecht"
WGS         JARUAB010000001-JARUAB010000276
WGS_SCAFLD  NZ_JARUAB010000001-NZ_JARUAB010000276
//
LOCUS       NZ_JBJLWZ010000000   4712635 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 141 J7, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLWZ000000000
VERSION     NZ_JBJLWZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114921
            Assembly: GCF_045800745.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4712635)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLWZ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLWZ000000000.  This version of the project
            (01) has the accession number NZ_JBJLWZ010000000, and consists of
            sequences JBJLWZ010000001-JBJLWZ010000129.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800745.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 14:02:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,710
            CDSs (total)                      :: 4,608
            Genes (coding)                    :: 4,381
            CDSs (with protein)               :: 4,381
            Genes (RNA)                       :: 102
            rRNAs                             :: 7, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 6, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 227
            CDSs (without protein)            :: 227
            Pseudo Genes (ambiguous residues) :: 0 of 227
            Pseudo Genes (frameshifted)       :: 67 of 227
            Pseudo Genes (incomplete)         :: 155 of 227
            Pseudo Genes (internal stop)      :: 34 of 227
            Pseudo Genes (multiple problems)  :: 26 of 227
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4712635
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="141 J7"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2017-06-11"
WGS         JBJLWZ010000001-JBJLWZ010000129
WGS_SCAFLD  NZ_JBJLWZ010000001-NZ_JBJLWZ010000129
//
LOCUS       NZ_JBGMPJ010000000   4859879 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-D03-PYO-120, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMPJ000000000
VERSION     NZ_JBGMPJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076766
            Assembly: GCF_045797425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4859879)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4859879)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMPJ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMPJ000000000.  This version of the project
            (01) has the accession number NZ_JBGMPJ010000000, and consists of
            sequences JBGMPJ010000001-JBGMPJ010000066.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 12-OCT-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 106x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797425.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:10:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,737
            CDSs (total)                      :: 4,638
            Genes (coding)                    :: 4,520
            CDSs (with protein)               :: 4,520
            Genes (RNA)                       :: 99
            rRNAs                             :: 8, 5, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 6, 5 (5S, 16S)
            tRNAs                             :: 79
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 39 of 118
            Pseudo Genes (incomplete)         :: 84 of 118
            Pseudo Genes (internal stop)      :: 17 of 118
            Pseudo Genes (multiple problems)  :: 21 of 118
            Pseudo Genes (short protein)      :: 2 of 118
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4859879
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-D03-PYO-120"
                     /isolation_source="Uterus"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2020-09-13"
WGS         JBGMPJ010000001-JBGMPJ010000066
WGS_SCAFLD  NZ_JBGMPJ010000001-NZ_JBGMPJ010000066
//
LOCUS       NZ_JBJLYO010000000   5125701 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 249 D4, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLYO000000000
VERSION     NZ_JBJLYO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114966
            Assembly: GCF_045799765.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5125701)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLYO000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLYO000000000.  This version of the project
            (01) has the accession number NZ_JBJLYO010000000, and consists of
            sequences JBJLYO010000001-JBJLYO010000181.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799765.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:55:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,104
            CDSs (total)                      :: 5,008
            Genes (coding)                    :: 4,745
            CDSs (with protein)               :: 4,745
            Genes (RNA)                       :: 96
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2, 2 (5S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 263
            CDSs (without protein)            :: 263
            Pseudo Genes (ambiguous residues) :: 0 of 263
            Pseudo Genes (frameshifted)       :: 64 of 263
            Pseudo Genes (incomplete)         :: 206 of 263
            Pseudo Genes (internal stop)      :: 32 of 263
            Pseudo Genes (multiple problems)  :: 35 of 263
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5125701
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="249 D4"
                     /isolation_source="Urines (Infection)"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2020-02-16"
WGS         JBJLYO010000001-JBJLYO010000181
WGS_SCAFLD  NZ_JBJLYO010000001-NZ_JBJLYO010000181
//
LOCUS       NZ_JBWBYU010000000   5715577 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Duganella zoogloeoides strain CC3A1_Virginia, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBWBYU000000000
VERSION     NZ_JBWBYU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56418711
            Assembly: GCF_056174725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Duganella zoogloeoides
  ORGANISM  Duganella zoogloeoides
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Telluria group; Duganella.
REFERENCE   1  (bases 1 to 5715577)
  AUTHORS   Haak,D.C.
  TITLE     Emma and Mychala sequence additions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5715577)
  AUTHORS   Haak,D.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2026) Biological Sciences, Virginia Tech, 926
            West Campus Drive, Blacksburg, VA 24061, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBYU000000000.1.
            The Duganella zoogloeoides whole genome shotgun (WGS) project has
            the project accession NZ_JBWBYU000000000.  This version of the
            project (01) has the accession number NZ_JBWBYU010000000, and
            consists of sequences JBWBYU010000001-JBWBYU010001246.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date             :: OCT-2025
            Assembly Method           :: GATB v. 2023
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: NA
            Genome Coverage           :: 100x
            Sequencing Technology     :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056174725.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:59:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,492
            CDSs (total)                      :: 5,387
            Genes (coding)                    :: 5,161
            CDSs (with protein)               :: 5,161
            Genes (RNA)                       :: 105
            rRNAs                             :: 3, 9, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 8, 4 (16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 226
            CDSs (without protein)            :: 226
            Pseudo Genes (ambiguous residues) :: 0 of 226
            Pseudo Genes (frameshifted)       :: 23 of 226
            Pseudo Genes (incomplete)         :: 200 of 226
            Pseudo Genes (internal stop)      :: 16 of 226
            Pseudo Genes (multiple problems)  :: 11 of 226
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5715577
                     /organism="Duganella zoogloeoides"
                     /mol_type="genomic DNA"
                     /strain="CC3A1_Virginia"
                     /isolation_source="field"
                     /host="amphibian"
                     /db_xref="taxon:75659"
                     /geo_loc_name="USA: Virginia,Blacksburg"
                     /lat_lon="37.229572 N 80.413840 W"
                     /collection_date="2016"
WGS         JBWBYU010000001-JBWBYU010001246
WGS_SCAFLD  NZ_JBWBYU010000001-NZ_JBWBYU010001246
//
LOCUS       NZ_JBJLZK010000000   4943185 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 271 I10, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLZK000000000
VERSION     NZ_JBJLZK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114988
            Assembly: GCF_045799475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4943185)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLZK000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLZK000000000.  This version of the project
            (01) has the accession number NZ_JBJLZK010000000, and consists of
            sequences JBJLZK010000001-JBJLZK010000178.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799475.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:32:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,930
            CDSs (total)                      :: 4,833
            Genes (coding)                    :: 4,607
            CDSs (with protein)               :: 4,607
            Genes (RNA)                       :: 97
            rRNAs                             :: 7, 5, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 7, 5, 3 (5S, 16S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 226
            CDSs (without protein)            :: 226
            Pseudo Genes (ambiguous residues) :: 0 of 226
            Pseudo Genes (frameshifted)       :: 58 of 226
            Pseudo Genes (incomplete)         :: 164 of 226
            Pseudo Genes (internal stop)      :: 34 of 226
            Pseudo Genes (multiple problems)  :: 25 of 226
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4943185
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="271 I10"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2020-11-07"
WGS         JBJLZK010000001-JBJLZK010000178
WGS_SCAFLD  NZ_JBJLZK010000001-NZ_JBJLZK010000178
//
LOCUS       NZ_JARTZE010000000   4668549 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 511423-22, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JARTZE000000000
VERSION     NZ_JARTZE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34004167
            Assembly: GCF_045795905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4668549)
  AUTHORS   Irimaso,E., Keinprecht,H., Szostak,M.P., Cabal Rosel,A., Stessl,B.,
            Desvars-Larrive,A., Ntakirutimana,C., Masengesho,G., Fischer,O.W.,
            Wittek,T., Mueller,E., Fessler,A.T., Braun,S.F., Schwarz,S.,
            Monecke,S., Ehricht,R., Spergser,J., Ruppitsch,W. and Loncaric,I.
  TITLE     Presence of broad-spectrum cephalosporin-resistant Enterobacterales
            isolated from ruminants in Rwanda
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4668549)
  AUTHORS   Szostak,M.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-MAR-2023) Department of Pathobiology, Institute of
            Microbiology, Veterinary University Vienna, Veterinaerplatz 1,
            Vienna 1210, Austria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARTZE000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JARTZE000000000.  This version of the project
            (01) has the accession number NZ_JARTZE010000000, and consists of
            sequences JARTZE010000001-JARTZE010000389.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 56x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795905.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:58:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,610
            CDSs (total)                      :: 4,527
            Genes (coding)                    :: 4,305
            CDSs (with protein)               :: 4,305
            Genes (RNA)                       :: 83
            rRNAs                             :: 4, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 3, 2 (5S, 16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 222
            CDSs (without protein)            :: 222
            Pseudo Genes (ambiguous residues) :: 0 of 222
            Pseudo Genes (frameshifted)       :: 60 of 222
            Pseudo Genes (incomplete)         :: 150 of 222
            Pseudo Genes (internal stop)      :: 36 of 222
            Pseudo Genes (multiple problems)  :: 22 of 222
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4668549
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="511423-22"
                     /host="goat"
                     /db_xref="taxon:562"
                     /geo_loc_name="Rwanda: Musanze"
                     /collection_date="2021"
                     /collected_by="Helga Keinprecht"
WGS         JARTZE010000001-JARTZE010000389
WGS_SCAFLD  NZ_JARTZE010000001-NZ_JARTZE010000389
//
LOCUS       NZ_JBJLXD010000000   4785834 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 161 E8, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLXD000000000
VERSION     NZ_JBJLXD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114925
            Assembly: GCF_045800155.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4785834)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLXD000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLXD000000000.  This version of the project
            (01) has the accession number NZ_JBJLXD010000000, and consists of
            sequences JBJLXD010000001-JBJLXD010000129.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800155.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:45:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,740
            CDSs (total)                      :: 4,649
            Genes (coding)                    :: 4,421
            CDSs (with protein)               :: 4,421
            Genes (RNA)                       :: 91
            rRNAs                             :: 7, 5, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 5, 5, 2 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 228
            CDSs (without protein)            :: 228
            Pseudo Genes (ambiguous residues) :: 0 of 228
            Pseudo Genes (frameshifted)       :: 67 of 228
            Pseudo Genes (incomplete)         :: 145 of 228
            Pseudo Genes (internal stop)      :: 53 of 228
            Pseudo Genes (multiple problems)  :: 31 of 228
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4785834
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="161 E8"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2018-01-15"
WGS         JBJLXD010000001-JBJLXD010000129
WGS_SCAFLD  NZ_JBJLXD010000001-NZ_JBJLXD010000129
//
LOCUS       NZ_JARTZR010000000   4530281 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 511410-22, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JARTZR000000000
VERSION     NZ_JARTZR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34004154
            Assembly: GCF_045796175.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4530281)
  AUTHORS   Irimaso,E., Keinprecht,H., Szostak,M.P., Cabal Rosel,A., Stessl,B.,
            Desvars-Larrive,A., Ntakirutimana,C., Masengesho,G., Fischer,O.W.,
            Wittek,T., Mueller,E., Fessler,A.T., Braun,S.F., Schwarz,S.,
            Monecke,S., Ehricht,R., Spergser,J., Ruppitsch,W. and Loncaric,I.
  TITLE     Presence of broad-spectrum cephalosporin-resistant Enterobacterales
            isolated from ruminants in Rwanda
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4530281)
  AUTHORS   Szostak,M.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-MAR-2023) Department of Pathobiology, Institute of
            Microbiology, Veterinary University Vienna, Veterinaerplatz 1,
            Vienna 1210, Austria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARTZR000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JARTZR000000000.  This version of the project
            (01) has the accession number NZ_JARTZR010000000, and consists of
            sequences JARTZR010000001-JARTZR010000289.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 68x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045796175.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:56:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,547
            CDSs (total)                      :: 4,450
            Genes (coding)                    :: 4,226
            CDSs (with protein)               :: 4,226
            Genes (RNA)                       :: 97
            rRNAs                             :: 2, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 2, 1, 3 (5S, 16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 224
            CDSs (without protein)            :: 224
            Pseudo Genes (ambiguous residues) :: 0 of 224
            Pseudo Genes (frameshifted)       :: 58 of 224
            Pseudo Genes (incomplete)         :: 160 of 224
            Pseudo Genes (internal stop)      :: 37 of 224
            Pseudo Genes (multiple problems)  :: 28 of 224
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4530281
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="511410-22"
                     /host="cattle"
                     /db_xref="taxon:562"
                     /geo_loc_name="Rwanda: Musanze"
                     /collection_date="2021"
                     /collected_by="Helga Keinprecht"
WGS         JARTZR010000001-JARTZR010000289
WGS_SCAFLD  NZ_JARTZR010000001-NZ_JARTZR010000289
//
LOCUS       NZ_JBJLXI010000000   4796813 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 165 F8, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLXI000000000
VERSION     NZ_JBJLXI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114931
            Assembly: GCF_045800115.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4796813)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLXI000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLXI000000000.  This version of the project
            (01) has the accession number NZ_JBJLXI010000000, and consists of
            sequences JBJLXI010000001-JBJLXI010000118.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 73x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800115.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:38:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,720
            CDSs (total)                      :: 4,627
            Genes (coding)                    :: 4,418
            CDSs (with protein)               :: 4,418
            Genes (RNA)                       :: 93
            rRNAs                             :: 6, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 3, 4 (5S, 16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 209
            CDSs (without protein)            :: 209
            Pseudo Genes (ambiguous residues) :: 0 of 209
            Pseudo Genes (frameshifted)       :: 62 of 209
            Pseudo Genes (incomplete)         :: 140 of 209
            Pseudo Genes (internal stop)      :: 43 of 209
            Pseudo Genes (multiple problems)  :: 33 of 209
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4796813
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="165 F8"
                     /isolation_source="Urines (Infection)"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2018-02-20"
WGS         JBJLXI010000001-JBJLXI010000118
WGS_SCAFLD  NZ_JBJLXI010000001-NZ_JBJLXI010000118
//
LOCUS       NZ_JBJLZZ010000000   4934362 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain EC2031, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLZZ000000000
VERSION     NZ_JBJLZZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45098937
            Assembly: GCF_045801095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4934362)
  AUTHORS   Kariuki,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2024) Centre for Microbiology, Kenya Medical
            Reserach Institute, Mbagathi, Nairobi 00200, Kenya
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLZZ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLZZ000000000.  This version of the project
            (01) has the accession number NZ_JBJLZZ010000000, and consists of
            sequences JBJLZZ010000001-JBJLZZ010000191.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-AUG-2024
            Assembly Method        :: SPAdes v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 140.6x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045801095.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:56:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,965
            CDSs (total)                      :: 4,842
            Genes (coding)                    :: 4,581
            CDSs (with protein)               :: 4,581
            Genes (RNA)                       :: 123
            rRNAs                             :: 8, 5, 19 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 6, 4, 19 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 261
            CDSs (without protein)            :: 261
            Pseudo Genes (ambiguous residues) :: 0 of 261
            Pseudo Genes (frameshifted)       :: 83 of 261
            Pseudo Genes (incomplete)         :: 176 of 261
            Pseudo Genes (internal stop)      :: 49 of 261
            Pseudo Genes (multiple problems)  :: 43 of 261
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4934362
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="EC2031"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Kenya: Kisii"
                     /collection_date="2019-10-15"
                     /collected_by="KEMRI,UW"
WGS         JBJLZZ010000001-JBJLZZ010000191
WGS_SCAFLD  NZ_JBJLZZ010000001-NZ_JBJLZZ010000191
//
LOCUS       NZ_JARTZZ010000000   4944365 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 511402-22, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JARTZZ000000000
VERSION     NZ_JARTZZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34004146
            Assembly: GCF_045796405.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4944365)
  AUTHORS   Irimaso,E., Keinprecht,H., Szostak,M.P., Cabal Rosel,A., Stessl,B.,
            Desvars-Larrive,A., Ntakirutimana,C., Masengesho,G., Fischer,O.W.,
            Wittek,T., Mueller,E., Fessler,A.T., Braun,S.F., Schwarz,S.,
            Monecke,S., Ehricht,R., Spergser,J., Ruppitsch,W. and Loncaric,I.
  TITLE     Presence of broad-spectrum cephalosporin-resistant Enterobacterales
            isolated from ruminants in Rwanda
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4944365)
  AUTHORS   Szostak,M.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-MAR-2023) Department of Pathobiology, Institute of
            Microbiology, Veterinary University Vienna, Veterinaerplatz 1,
            Vienna 1210, Austria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARTZZ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JARTZZ000000000.  This version of the project
            (01) has the accession number NZ_JARTZZ010000000, and consists of
            sequences JARTZZ010000001-JARTZZ010000494.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 46x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045796405.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:54:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,045
            CDSs (total)                      :: 4,959
            Genes (coding)                    :: 4,649
            CDSs (with protein)               :: 4,649
            Genes (RNA)                       :: 86
            rRNAs                             :: 3, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 2 (5S, 16S)
            tRNAs                             :: 66
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 310
            CDSs (without protein)            :: 310
            Pseudo Genes (ambiguous residues) :: 0 of 310
            Pseudo Genes (frameshifted)       :: 83 of 310
            Pseudo Genes (incomplete)         :: 238 of 310
            Pseudo Genes (internal stop)      :: 40 of 310
            Pseudo Genes (multiple problems)  :: 45 of 310
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4944365
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="511402-22"
                     /host="cattle"
                     /db_xref="taxon:562"
                     /geo_loc_name="Rwanda: Musanze"
                     /collection_date="2021"
                     /collected_by="Helga Keinprecht"
WGS         JARTZZ010000001-JARTZZ010000494
WGS_SCAFLD  NZ_JARTZZ010000001-NZ_JARTZZ010000494
//
LOCUS       NZ_JBJLZU010000000   4976267 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 97 C3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLZU000000000
VERSION     NZ_JBJLZU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114998
            Assembly: GCF_045800495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4976267)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLZU000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLZU000000000.  This version of the project
            (01) has the accession number NZ_JBJLZU010000000, and consists of
            sequences JBJLZU010000001-JBJLZU010000158.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 115x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800495.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:47:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,924
            CDSs (total)                      :: 4,826
            Genes (coding)                    :: 4,606
            CDSs (with protein)               :: 4,606
            Genes (RNA)                       :: 98
            rRNAs                             :: 5, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 3, 3, 4 (5S, 16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 220
            CDSs (without protein)            :: 220
            Pseudo Genes (ambiguous residues) :: 0 of 220
            Pseudo Genes (frameshifted)       :: 73 of 220
            Pseudo Genes (incomplete)         :: 147 of 220
            Pseudo Genes (internal stop)      :: 43 of 220
            Pseudo Genes (multiple problems)  :: 39 of 220
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4976267
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="97 C3"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2015-12-04"
WGS         JBJLZU010000001-JBJLZU010000158
WGS_SCAFLD  NZ_JBJLZU010000001-NZ_JBJLZU010000158
//
LOCUS       NZ_JBGMPA010000000   5129443 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-E06-PYO-327, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMPA000000000
VERSION     NZ_JBGMPA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076775
            Assembly: GCF_045797265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5129443)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5129443)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMPA000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMPA000000000.  This version of the project
            (01) has the accession number NZ_JBGMPA010000000, and consists of
            sequences JBGMPA010000001-JBGMPA010000172.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 21-OCT-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 98x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797265.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:19:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,090
            CDSs (total)                      :: 4,991
            Genes (coding)                    :: 4,704
            CDSs (with protein)               :: 4,704
            Genes (RNA)                       :: 99
            rRNAs                             :: 6, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 4, 3, 4 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 287
            CDSs (without protein)            :: 287
            Pseudo Genes (ambiguous residues) :: 1 of 287
            Pseudo Genes (frameshifted)       :: 102 of 287
            Pseudo Genes (incomplete)         :: 224 of 287
            Pseudo Genes (internal stop)      :: 45 of 287
            Pseudo Genes (multiple problems)  :: 77 of 287
            Pseudo Genes (short protein)      :: 1 of 287
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5129443
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-E06-PYO-327"
                     /isolation_source="urine"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2023-01-15"
WGS         JBGMPA010000001-JBGMPA010000172
WGS_SCAFLD  NZ_JBGMPA010000001-NZ_JBGMPA010000172
//
LOCUS       NZ_JBJLWN010000000   4791597 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 106 C6, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLWN000000000
VERSION     NZ_JBJLWN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114908
            Assembly: GCF_045800935.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4791597)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLWN000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLWN000000000.  This version of the project
            (01) has the accession number NZ_JBJLWN010000000, and consists of
            sequences JBJLWN010000001-JBJLWN010000117.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800935.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:42:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,711
            CDSs (total)                      :: 4,610
            Genes (coding)                    :: 4,387
            CDSs (with protein)               :: 4,387
            Genes (RNA)                       :: 101
            rRNAs                             :: 6, 4, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 3, 4 (5S, 16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 223
            CDSs (without protein)            :: 223
            Pseudo Genes (ambiguous residues) :: 0 of 223
            Pseudo Genes (frameshifted)       :: 70 of 223
            Pseudo Genes (incomplete)         :: 153 of 223
            Pseudo Genes (internal stop)      :: 41 of 223
            Pseudo Genes (multiple problems)  :: 35 of 223
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4791597
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="106 C6"
                     /isolation_source="Urines (Infection)"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2016-03-20"
WGS         JBJLWN010000001-JBJLWN010000117
WGS_SCAFLD  NZ_JBJLWN010000001-NZ_JBJLWN010000117
//
LOCUS       NZ_JBBXMR010000000   5495962 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 524R2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBBXMR000000000
VERSION     NZ_JBBXMR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40926173
            Assembly: GCF_045909135.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5495962)
  AUTHORS   Xu,J., Liu,J., Zhao,J., Tian,T., Wang,M., Yuan,G., Peng,Y.,
            Zhang,Y., Li,Z., Kan,B., Li,Z. and Lu,X.
  TITLE     Clonal and horizontal transmission of carbapenem-resistant
            Enterobacterales strains and genes via flies
  JOURNAL   Gut Pathog 16 (1), 70 (2024)
   PUBMED   39550588
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5495962)
  AUTHORS   Liu,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-APR-2024) Chinese Center for Disease Control and
            Prevention, 155, Beijing 102200, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBXMR000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBBXMR000000000.  This version of the project
            (01) has the accession number NZ_JBBXMR010000000, and consists of
            sequences JBBXMR010000001-JBBXMR010000098.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2018
            Assembly Method        :: Unicycler v. 1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina; Oxford Nanopore GridION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045909135.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 14:06:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,483
            CDSs (total)                      :: 5,402
            Genes (coding)                    :: 5,168
            CDSs (with protein)               :: 5,168
            Genes (RNA)                       :: 81
            rRNAs                             :: 2, 1 (5S, 16S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 73
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 234
            CDSs (without protein)            :: 234
            Pseudo Genes (ambiguous residues) :: 0 of 234
            Pseudo Genes (frameshifted)       :: 80 of 234
            Pseudo Genes (incomplete)         :: 166 of 234
            Pseudo Genes (internal stop)      :: 36 of 234
            Pseudo Genes (multiple problems)  :: 44 of 234
            Pseudo Genes (short protein)      :: 1 of 234
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5495962
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="524R2"
                     /isolation_source="isolate from fly samples"
                     /db_xref="taxon:562"
                     /geo_loc_name="China: Henan"
                     /collection_date="2018"
WGS         JBBXMR010000001-JBBXMR010000098
WGS_SCAFLD  NZ_JBBXMR010000001-NZ_JBBXMR010000098
//
LOCUS       NZ_JBJMBE010000000   5038923 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain NNEc 2761, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJMBE000000000
VERSION     NZ_JBJMBE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45098549
            Assembly: GCF_045799125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5038923)
  AUTHORS   Boriskina,E.V., Gordinskaya,N.A., Alekseeva,A.E., Makhova,M.A. and
            Kryazhev,D.V.
  TITLE     Whole genome of Escherichia coli NNEc 2761
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5038923)
  AUTHORS   Boriskina,E.V., Gordinskaya,N.A., Alekseeva,A.E., Makhova,M.A. and
            Kryazhev,D.V.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-NOV-2024) microbiology laboratory,
            https://nniiem.ru/en.html, Malaya Yamskaya, 71, Nizhny Novgorod
            603950, Russia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJMBE000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJMBE000000000.  This version of the project
            (01) has the accession number NZ_JBJMBE010000000, and consists of
            sequences JBJMBE010000001-JBJMBE010000123.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2023
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 20.0x
            Sequencing Technology  :: Illumina iSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799125.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:31:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,013
            CDSs (total)                      :: 4,928
            Genes (coding)                    :: 4,713
            CDSs (with protein)               :: 4,713
            Genes (RNA)                       :: 85
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 78
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 215
            CDSs (without protein)            :: 215
            Pseudo Genes (ambiguous residues) :: 0 of 215
            Pseudo Genes (frameshifted)       :: 74 of 215
            Pseudo Genes (incomplete)         :: 161 of 215
            Pseudo Genes (internal stop)      :: 35 of 215
            Pseudo Genes (multiple problems)  :: 48 of 215
            Pseudo Genes (short protein)      :: 1 of 215
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5038923
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="NNEc 2761"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Russia"
                     /collection_date="2023-01-05"
WGS         JBJMBE010000001-JBJMBE010000123
WGS_SCAFLD  NZ_JBJMBE010000001-NZ_JBJMBE010000123
//
LOCUS       NZ_JARTZY010000000   4912862 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 511403-22, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JARTZY000000000
VERSION     NZ_JARTZY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34004147
            Assembly: GCF_045796345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4912862)
  AUTHORS   Irimaso,E., Keinprecht,H., Szostak,M.P., Cabal Rosel,A., Stessl,B.,
            Desvars-Larrive,A., Ntakirutimana,C., Masengesho,G., Fischer,O.W.,
            Wittek,T., Mueller,E., Fessler,A.T., Braun,S.F., Schwarz,S.,
            Monecke,S., Ehricht,R., Spergser,J., Ruppitsch,W. and Loncaric,I.
  TITLE     Presence of broad-spectrum cephalosporin-resistant Enterobacterales
            isolated from ruminants in Rwanda
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4912862)
  AUTHORS   Szostak,M.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-MAR-2023) Department of Pathobiology, Institute of
            Microbiology, Veterinary University Vienna, Veterinaerplatz 1,
            Vienna 1210, Austria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARTZY000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JARTZY000000000.  This version of the project
            (01) has the accession number NZ_JARTZY010000000, and consists of
            sequences JARTZY010000001-JARTZY010000185.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 61x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045796345.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:16:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,748
            CDSs (total)                      :: 4,664
            Genes (coding)                    :: 4,489
            CDSs (with protein)               :: 4,489
            Genes (RNA)                       :: 84
            rRNAs                             :: 2, 5, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 5, 6 (16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 175
            CDSs (without protein)            :: 175
            Pseudo Genes (ambiguous residues) :: 0 of 175
            Pseudo Genes (frameshifted)       :: 49 of 175
            Pseudo Genes (incomplete)         :: 131 of 175
            Pseudo Genes (internal stop)      :: 15 of 175
            Pseudo Genes (multiple problems)  :: 20 of 175
            Pseudo Genes (short protein)      :: 1 of 175
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4912862
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="511403-22"
                     /host="cattle"
                     /db_xref="taxon:562"
                     /geo_loc_name="Rwanda: Musanze"
                     /collection_date="2021"
                     /collected_by="Helga Keinprecht"
WGS         JARTZY010000001-JARTZY010000185
WGS_SCAFLD  NZ_JARTZY010000001-NZ_JARTZY010000185
//
LOCUS       NZ_JBGMPC010000000   5066839 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-E04-PYO-232, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMPC000000000
VERSION     NZ_JBGMPC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076773
            Assembly: GCF_045797285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5066839)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5066839)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMPC000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMPC000000000.  This version of the project
            (01) has the accession number NZ_JBGMPC010000000, and consists of
            sequences JBGMPC010000001-JBGMPC010000115.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-OCT-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 101x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797285.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:13:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,998
            CDSs (total)                      :: 4,907
            Genes (coding)                    :: 4,662
            CDSs (with protein)               :: 4,662
            Genes (RNA)                       :: 91
            rRNAs                             :: 5, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 2 (5S, 16S)
            tRNAs                             :: 76
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 245
            CDSs (without protein)            :: 245
            Pseudo Genes (ambiguous residues) :: 0 of 245
            Pseudo Genes (frameshifted)       :: 89 of 245
            Pseudo Genes (incomplete)         :: 178 of 245
            Pseudo Genes (internal stop)      :: 42 of 245
            Pseudo Genes (multiple problems)  :: 55 of 245
            Pseudo Genes (short protein)      :: 1 of 245
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5066839
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-E04-PYO-232"
                     /isolation_source="urine"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2021-05-24"
WGS         JBGMPC010000001-JBGMPC010000115
WGS_SCAFLD  NZ_JBGMPC010000001-NZ_JBGMPC010000115
//
LOCUS       NZ_JBJNVN010000000   5013141 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain NNEc 2754, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJNVN000000000
VERSION     NZ_JBJNVN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45158350
            Assembly: GCF_045900855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5013141)
  AUTHORS   Boriskina,E.V., Gordinskaya,N.A., Alekseeva,A.E., Makhova,M.A. and
            Kryazhev,D.V.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2024) microbiology laboratory, Federal Budgetary
            Science Institution Academician I.N. Blokhina Nizhny Novgorod
            Scientific Research Institute of Epidemiology and Microbiology,
            Malaya Yamskaya, 71, Nizhny Novgorod 603950, Russia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJNVN000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJNVN000000000.  This version of the project
            (01) has the accession number NZ_JBJNVN010000000, and consists of
            sequences JBJNVN010000001-JBJNVN010000120.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 20.0x
            Sequencing Technology  :: Illumina iSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045900855.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 14:12:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,997
            CDSs (total)                      :: 4,914
            Genes (coding)                    :: 4,720
            CDSs (with protein)               :: 4,720
            Genes (RNA)                       :: 83
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 194
            CDSs (without protein)            :: 194
            Pseudo Genes (ambiguous residues) :: 0 of 194
            Pseudo Genes (frameshifted)       :: 70 of 194
            Pseudo Genes (incomplete)         :: 150 of 194
            Pseudo Genes (internal stop)      :: 32 of 194
            Pseudo Genes (multiple problems)  :: 49 of 194
            Pseudo Genes (short protein)      :: 1 of 194
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5013141
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="NNEc 2754"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Russia"
                     /collection_date="2022-12-20"
WGS         JBJNVN010000001-JBJNVN010000120
WGS_SCAFLD  NZ_JBJNVN010000001-NZ_JBJNVN010000120
//
LOCUS       NZ_JBGMPL010000000   4958592 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-D01-PYO-14, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMPL000000000
VERSION     NZ_JBGMPL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076764
            Assembly: GCF_045797465.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4958592)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4958592)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMPL000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMPL000000000.  This version of the project
            (01) has the accession number NZ_JBGMPL010000000, and consists of
            sequences JBGMPL010000001-JBGMPL010000086.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 10-OCT-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 101x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797465.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:04:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,762
            CDSs (total)                      :: 4,666
            Genes (coding)                    :: 4,459
            CDSs (with protein)               :: 4,459
            Genes (RNA)                       :: 96
            rRNAs                             :: 8, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 7, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 207
            CDSs (without protein)            :: 207
            Pseudo Genes (ambiguous residues) :: 0 of 207
            Pseudo Genes (frameshifted)       :: 77 of 207
            Pseudo Genes (incomplete)         :: 154 of 207
            Pseudo Genes (internal stop)      :: 33 of 207
            Pseudo Genes (multiple problems)  :: 50 of 207
            Pseudo Genes (short protein)      :: 1 of 207
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4958592
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-D01-PYO-14"
                     /isolation_source="urine"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2019-09-06"
WGS         JBGMPL010000001-JBGMPL010000086
WGS_SCAFLD  NZ_JBGMPL010000001-NZ_JBGMPL010000086
//
LOCUS       NZ_JBJNTJ010000000   4924062 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 130 F8, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJNTJ000000000
VERSION     NZ_JBJNTJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114916
            Assembly: GCF_045897855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4924062)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJNTJ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJNTJ000000000.  This version of the project
            (01) has the accession number NZ_JBJNTJ010000000, and consists of
            sequences JBJNTJ010000001-JBJNTJ010000267.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 201x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045897855.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 14:07:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,896
            CDSs (total)                      :: 4,804
            Genes (coding)                    :: 4,556
            CDSs (with protein)               :: 4,556
            Genes (RNA)                       :: 92
            rRNAs                             :: 4, 5, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 5, 2 (5S, 16S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 248
            CDSs (without protein)            :: 248
            Pseudo Genes (ambiguous residues) :: 0 of 248
            Pseudo Genes (frameshifted)       :: 77 of 248
            Pseudo Genes (incomplete)         :: 170 of 248
            Pseudo Genes (internal stop)      :: 44 of 248
            Pseudo Genes (multiple problems)  :: 39 of 248
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4924062
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="130 F8"
                     /isolation_source="Urines (Infection)"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2017-01-23"
WGS         JBJNTJ010000001-JBJNTJ010000267
WGS_SCAFLD  NZ_JBJNTJ010000001-NZ_JBJNTJ010000267
//
LOCUS       NZ_JBGMPX010000000   5209939 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-B01-PYO-8, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMPX000000000
VERSION     NZ_JBGMPX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076752
            Assembly: GCF_045797765.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5209939)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5209939)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMPX000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMPX000000000.  This version of the project
            (01) has the accession number NZ_JBGMPX010000000, and consists of
            sequences JBGMPX010000001-JBGMPX010000159.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 28-SEP-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 98x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797765.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:07:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,191
            CDSs (total)                      :: 5,073
            Genes (coding)                    :: 4,783
            CDSs (with protein)               :: 4,783
            Genes (RNA)                       :: 118
            rRNAs                             :: 6, 13, 11 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 13, 11 (5S, 16S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 290
            CDSs (without protein)            :: 290
            Pseudo Genes (ambiguous residues) :: 0 of 290
            Pseudo Genes (frameshifted)       :: 119 of 290
            Pseudo Genes (incomplete)         :: 218 of 290
            Pseudo Genes (internal stop)      :: 51 of 290
            Pseudo Genes (multiple problems)  :: 87 of 290
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5209939
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-B01-PYO-8"
                     /isolation_source="Uterus"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2019-08-21"
WGS         JBGMPX010000001-JBGMPX010000159
WGS_SCAFLD  NZ_JBGMPX010000001-NZ_JBGMPX010000159
//
LOCUS       NZ_JBIHJH010000000   5138913 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E762, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHJH000000000
VERSION     NZ_JBIHJH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235122
            Assembly: GCF_045610445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5138913)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHJH000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHJH000000000.  This version of the project
            (01) has the accession number NZ_JBIHJH010000000, and consists of
            sequences JBIHJH010000001-JBIHJH010000014.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 88x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045610445.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:24:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,117
            CDSs (total)                      :: 5,004
            Genes (coding)                    :: 4,669
            CDSs (with protein)               :: 4,669
            Genes (RNA)                       :: 113
            rRNAs                             :: 7, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 7, 6 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 82
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 335
            CDSs (without protein)            :: 335
            Pseudo Genes (ambiguous residues) :: 0 of 335
            Pseudo Genes (frameshifted)       :: 180 of 335
            Pseudo Genes (incomplete)         :: 170 of 335
            Pseudo Genes (internal stop)      :: 49 of 335
            Pseudo Genes (multiple problems)  :: 55 of 335
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5138913
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E762"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHJH010000001-JBIHJH010000014
WGS_SCAFLD  NZ_JBIHJH010000001-NZ_JBIHJH010000014
//
LOCUS       NZ_JBJLXJ010000000   5002774 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 167 B9, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLXJ000000000
VERSION     NZ_JBJLXJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114932
            Assembly: GCF_045799345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5002774)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLXJ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLXJ000000000.  This version of the project
            (01) has the accession number NZ_JBJLXJ010000000, and consists of
            sequences JBJLXJ010000001-JBJLXJ010000150.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799345.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:21:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,041
            CDSs (total)                      :: 4,945
            Genes (coding)                    :: 4,721
            CDSs (with protein)               :: 4,721
            Genes (RNA)                       :: 96
            rRNAs                             :: 7, 4, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 6, 4, 3 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 224
            CDSs (without protein)            :: 224
            Pseudo Genes (ambiguous residues) :: 0 of 224
            Pseudo Genes (frameshifted)       :: 70 of 224
            Pseudo Genes (incomplete)         :: 156 of 224
            Pseudo Genes (internal stop)      :: 40 of 224
            Pseudo Genes (multiple problems)  :: 37 of 224
            Pseudo Genes (short protein)      :: 1 of 224
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5002774
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="167 B9"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2018-03-07"
WGS         JBJLXJ010000001-JBJLXJ010000150
WGS_SCAFLD  NZ_JBJLXJ010000001-NZ_JBJLXJ010000150
//
LOCUS       NZ_JBIWYU010000000   5609778 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1242, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIWYU000000000
VERSION     NZ_JBIWYU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247385
            Assembly: GCF_045618275.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5609778)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIWYU000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIWYU000000000.  This version of the project
            (01) has the accession number NZ_JBIWYU010000000, and consists of
            sequences JBIWYU010000001-JBIWYU010000014.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 387x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045618275.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:24:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,645
            CDSs (total)                      :: 5,522
            Genes (coding)                    :: 5,126
            CDSs (with protein)               :: 5,126
            Genes (RNA)                       :: 123
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 90
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 396
            CDSs (without protein)            :: 396
            Pseudo Genes (ambiguous residues) :: 0 of 396
            Pseudo Genes (frameshifted)       :: 226 of 396
            Pseudo Genes (incomplete)         :: 189 of 396
            Pseudo Genes (internal stop)      :: 49 of 396
            Pseudo Genes (multiple problems)  :: 62 of 396
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5609778
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1242"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIWYU010000001-JBIWYU010000014
WGS_SCAFLD  NZ_JBIWYU010000001-NZ_JBIWYU010000014
//
LOCUS       NZ_JBJLYV010000000   5267478 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 255 I7, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLYV000000000
VERSION     NZ_JBJLYV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114973
            Assembly: GCF_045799705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5267478)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLYV000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLYV000000000.  This version of the project
            (01) has the accession number NZ_JBJLYV010000000, and consists of
            sequences JBJLYV010000001-JBJLYV010000120.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799705.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:30:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,196
            CDSs (total)                      :: 5,095
            Genes (coding)                    :: 4,894
            CDSs (with protein)               :: 4,894
            Genes (RNA)                       :: 101
            rRNAs                             :: 5, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 3, 1, 2 (5S, 16S, 23S)
            tRNAs                             :: 80
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 201
            CDSs (without protein)            :: 201
            Pseudo Genes (ambiguous residues) :: 0 of 201
            Pseudo Genes (frameshifted)       :: 60 of 201
            Pseudo Genes (incomplete)         :: 148 of 201
            Pseudo Genes (internal stop)      :: 32 of 201
            Pseudo Genes (multiple problems)  :: 36 of 201
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5267478
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="255 I7"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2020-02-29"
WGS         JBJLYV010000001-JBJLYV010000120
WGS_SCAFLD  NZ_JBJLYV010000001-NZ_JBJLYV010000120
//
LOCUS       NZ_JBIXAW010000000   5220943 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1177, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXAW000000000
VERSION     NZ_JBIXAW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247331
            Assembly: GCF_045619305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5220943)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXAW000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXAW000000000.  This version of the project
            (01) has the accession number NZ_JBIXAW010000000, and consists of
            sequences JBIXAW010000001-JBIXAW010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 163x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045619305.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:23:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,168
            CDSs (total)                      :: 5,055
            Genes (coding)                    :: 4,761
            CDSs (with protein)               :: 4,761
            Genes (RNA)                       :: 113
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 294
            CDSs (without protein)            :: 294
            Pseudo Genes (ambiguous residues) :: 0 of 294
            Pseudo Genes (frameshifted)       :: 140 of 294
            Pseudo Genes (incomplete)         :: 182 of 294
            Pseudo Genes (internal stop)      :: 33 of 294
            Pseudo Genes (multiple problems)  :: 54 of 294
            Pseudo Genes (short protein)      :: 1 of 294
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5220943
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1177"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXAW010000001-JBIXAW010000004
WGS_SCAFLD  NZ_JBIXAW010000001-NZ_JBIXAW010000004
//
LOCUS       NZ_JADOEC010000000   5168991 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 20-AB00611-0, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JADOEC000000000
VERSION     NZ_JADOEC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN16793118
            Assembly: GCF_045748345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5168991)
  AUTHORS   Hammerl,J.A.
  TITLE     Genome sequences of Escherichia coli from livestock and food
            involved in the development of emerging clonal lineages in humans
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5168991)
  AUTHORS   Hammerl,J.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-NOV-2020) Biological Safety, German Federal Institute
            for Risk Assessment, Diedersdorfer Weg 1, Berlin 12277, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JADOEC000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JADOEC000000000.  This version of the project
            (01) has the accession number NZ_JADOEC010000000, and consists of
            sequences JADOEC010000001-JADOEC010000117.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from German Federal Institute for
            Risk Assessment.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.6.7
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 75.0x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045748345.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:30:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,107
            CDSs (total)                      :: 5,026
            Genes (coding)                    :: 4,816
            CDSs (with protein)               :: 4,816
            Genes (RNA)                       :: 81
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 72
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 210
            CDSs (without protein)            :: 210
            Pseudo Genes (ambiguous residues) :: 0 of 210
            Pseudo Genes (frameshifted)       :: 81 of 210
            Pseudo Genes (incomplete)         :: 151 of 210
            Pseudo Genes (internal stop)      :: 39 of 210
            Pseudo Genes (multiple problems)  :: 51 of 210
            Pseudo Genes (short protein)      :: 1 of 210
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5168991
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="20-AB00611-0"
                     /isolation_source="chicken"
                     /db_xref="taxon:562"
                     /geo_loc_name="Germany"
                     /collection_date="2020"
                     /collected_by="German Federal Institute for Risk
                     Assessment"
WGS         JADOEC010000001-JADOEC010000117
WGS_SCAFLD  NZ_JADOEC010000001-NZ_JADOEC010000117
//
LOCUS       NZ_JBIHJZ010000000   5005005 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E730, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHJZ000000000
VERSION     NZ_JBIHJZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235095
            Assembly: GCF_045610785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5005005)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHJZ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHJZ000000000.  This version of the project
            (01) has the accession number NZ_JBIHJZ010000000, and consists of
            sequences JBIHJZ010000001-JBIHJZ010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 245x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045610785.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:11:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,841
            CDSs (total)                      :: 4,721
            Genes (coding)                    :: 4,594
            CDSs (with protein)               :: 4,594
            Genes (RNA)                       :: 120
            rRNAs                             :: 7, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 7, 6 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 88
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 127
            CDSs (without protein)            :: 127
            Pseudo Genes (ambiguous residues) :: 0 of 127
            Pseudo Genes (frameshifted)       :: 69 of 127
            Pseudo Genes (incomplete)         :: 65 of 127
            Pseudo Genes (internal stop)      :: 9 of 127
            Pseudo Genes (multiple problems)  :: 15 of 127
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5005005
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E730"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHJZ010000001-JBIHJZ010000005
WGS_SCAFLD  NZ_JBIHJZ010000001-NZ_JBIHJZ010000005
//
LOCUS       NZ_JBIWYW010000000   5458300 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1240, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIWYW000000000
VERSION     NZ_JBIWYW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247383
            Assembly: GCF_045618345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5458300)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIWYW000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIWYW000000000.  This version of the project
            (01) has the accession number NZ_JBIWYW010000000, and consists of
            sequences JBIWYW010000001-JBIWYW010000010.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 202x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045618345.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:32:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,355
            CDSs (total)                      :: 5,233
            Genes (coding)                    :: 4,920
            CDSs (with protein)               :: 4,920
            Genes (RNA)                       :: 122
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 313
            CDSs (without protein)            :: 313
            Pseudo Genes (ambiguous residues) :: 0 of 313
            Pseudo Genes (frameshifted)       :: 167 of 313
            Pseudo Genes (incomplete)         :: 179 of 313
            Pseudo Genes (internal stop)      :: 41 of 313
            Pseudo Genes (multiple problems)  :: 67 of 313
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5458300
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1240"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIWYW010000001-JBIWYW010000010
WGS_SCAFLD  NZ_JBIWYW010000001-NZ_JBIWYW010000010
//
LOCUS       NZ_JBIXAF010000000   5495610 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1196, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXAF000000000
VERSION     NZ_JBIXAF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247348
            Assembly: GCF_045618985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5495610)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXAF000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXAF000000000.  This version of the project
            (01) has the accession number NZ_JBIXAF010000000, and consists of
            sequences JBIXAF010000001-JBIXAF010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 220x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045618985.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:28:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,408
            CDSs (total)                      :: 5,287
            Genes (coding)                    :: 4,945
            CDSs (with protein)               :: 4,945
            Genes (RNA)                       :: 121
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 342
            CDSs (without protein)            :: 342
            Pseudo Genes (ambiguous residues) :: 0 of 342
            Pseudo Genes (frameshifted)       :: 185 of 342
            Pseudo Genes (incomplete)         :: 177 of 342
            Pseudo Genes (internal stop)      :: 42 of 342
            Pseudo Genes (multiple problems)  :: 57 of 342
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5495610
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1196"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXAF010000001-JBIXAF010000007
WGS_SCAFLD  NZ_JBIXAF010000001-NZ_JBIXAF010000007
//
LOCUS       NZ_JBIXCI010000000   5445387 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1132, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXCI000000000
VERSION     NZ_JBIXCI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247293
            Assembly: GCF_045620165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5445387)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXCI000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXCI000000000.  This version of the project
            (01) has the accession number NZ_JBIXCI010000000, and consists of
            sequences JBIXCI010000001-JBIXCI010000010.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 382x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045620165.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:24:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,443
            CDSs (total)                      :: 5,324
            Genes (coding)                    :: 5,044
            CDSs (with protein)               :: 5,044
            Genes (RNA)                       :: 119
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 280
            CDSs (without protein)            :: 280
            Pseudo Genes (ambiguous residues) :: 0 of 280
            Pseudo Genes (frameshifted)       :: 137 of 280
            Pseudo Genes (incomplete)         :: 160 of 280
            Pseudo Genes (internal stop)      :: 33 of 280
            Pseudo Genes (multiple problems)  :: 43 of 280
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5445387
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1132"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXCI010000001-JBIXCI010000010
WGS_SCAFLD  NZ_JBIXCI010000001-NZ_JBIXCI010000010
//
LOCUS       NZ_JBIXEQ010000000   4860931 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1064, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXEQ000000000
VERSION     NZ_JBIXEQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247233
            Assembly: GCF_045621365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4860931)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXEQ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXEQ000000000.  This version of the project
            (01) has the accession number NZ_JBIXEQ010000000, and consists of
            sequences JBIXEQ010000001-JBIXEQ010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 306x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045621365.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:25:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,740
            CDSs (total)                      :: 4,625
            Genes (coding)                    :: 4,459
            CDSs (with protein)               :: 4,459
            Genes (RNA)                       :: 115
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 96 of 166
            Pseudo Genes (incomplete)         :: 74 of 166
            Pseudo Genes (internal stop)      :: 19 of 166
            Pseudo Genes (multiple problems)  :: 22 of 166
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4860931
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1064"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXEQ010000001-JBIXEQ010000004
WGS_SCAFLD  NZ_JBIXEQ010000001-NZ_JBIXEQ010000004
//
LOCUS       NZ_JARTYT010000000   5082351 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 511434-22, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JARTYT000000000
VERSION     NZ_JARTYT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34004178
            Assembly: GCF_045795705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5082351)
  AUTHORS   Irimaso,E., Keinprecht,H., Szostak,M.P., Cabal Rosel,A., Stessl,B.,
            Desvars-Larrive,A., Ntakirutimana,C., Masengesho,G., Fischer,O.W.,
            Wittek,T., Mueller,E., Fessler,A.T., Braun,S.F., Schwarz,S.,
            Monecke,S., Ehricht,R., Spergser,J., Ruppitsch,W. and Loncaric,I.
  TITLE     Presence of broad-spectrum cephalosporin-resistant Enterobacterales
            isolated from ruminants in Rwanda
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5082351)
  AUTHORS   Szostak,M.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-MAR-2023) Department of Pathobiology, Institute of
            Microbiology, Veterinary University Vienna, Veterinaerplatz 1,
            Vienna 1210, Austria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARTYT000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JARTYT000000000.  This version of the project
            (01) has the accession number NZ_JARTYT010000000, and consists of
            sequences JARTYT010000001-JARTYT010000438.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 38x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795705.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:49:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,183
            CDSs (total)                      :: 5,085
            Genes (coding)                    :: 4,802
            CDSs (with protein)               :: 4,802
            Genes (RNA)                       :: 98
            rRNAs                             :: 3, 5, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 5, 2 (5S, 16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 283
            CDSs (without protein)            :: 283
            Pseudo Genes (ambiguous residues) :: 0 of 283
            Pseudo Genes (frameshifted)       :: 78 of 283
            Pseudo Genes (incomplete)         :: 210 of 283
            Pseudo Genes (internal stop)      :: 43 of 283
            Pseudo Genes (multiple problems)  :: 44 of 283
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5082351
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="511434-22"
                     /host="sheep"
                     /db_xref="taxon:562"
                     /geo_loc_name="Rwanda: Musanze"
                     /collection_date="2021"
                     /collected_by="Helga Keinprecht"
WGS         JARTYT010000001-JARTYT010000438
WGS_SCAFLD  NZ_JARTYT010000001-NZ_JARTYT010000438
//
LOCUS       NZ_JADODZ010000000   5064461 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 20-AB00823-0, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JADODZ000000000
VERSION     NZ_JADODZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN16793104
            Assembly: GCF_045748225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5064461)
  AUTHORS   Hammerl,J.A.
  TITLE     Genome sequences of Escherichia coli from livestock and food
            involved in the development of emerging clonal lineages in humans
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5064461)
  AUTHORS   Hammerl,J.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-NOV-2020) Biological Safety, German Federal Institute
            for Risk Assessment, Diedersdorfer Weg 1, Berlin 12277, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JADODZ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JADODZ000000000.  This version of the project
            (01) has the accession number NZ_JADODZ010000000, and consists of
            sequences JADODZ010000001-JADODZ010000150.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from German Federal Institute for
            Risk Assessment.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.6.7
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 75.0x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045748225.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:30:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,055
            CDSs (total)                      :: 4,998
            Genes (coding)                    :: 4,802
            CDSs (with protein)               :: 4,802
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 2 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 47
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 196
            CDSs (without protein)            :: 196
            Pseudo Genes (ambiguous residues) :: 0 of 196
            Pseudo Genes (frameshifted)       :: 70 of 196
            Pseudo Genes (incomplete)         :: 131 of 196
            Pseudo Genes (internal stop)      :: 35 of 196
            Pseudo Genes (multiple problems)  :: 37 of 196
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5064461
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="20-AB00823-0"
                     /isolation_source="turkey"
                     /db_xref="taxon:562"
                     /geo_loc_name="Germany"
                     /collection_date="2020"
                     /collected_by="German Federal Institute for Risk
                     Assessment"
WGS         JADODZ010000001-JADODZ010000150
WGS_SCAFLD  NZ_JADODZ010000001-NZ_JADODZ010000150
//
LOCUS       NZ_JBJNTN010000000   4724496 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 235 C8, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJNTN000000000
VERSION     NZ_JBJNTN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114953
            Assembly: GCF_045897455.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4724496)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJNTN000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJNTN000000000.  This version of the project
            (01) has the accession number NZ_JBJNTN010000000, and consists of
            sequences JBJNTN010000001-JBJNTN010000227.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045897455.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 14:05:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,714
            CDSs (total)                      :: 4,623
            Genes (coding)                    :: 4,390
            CDSs (with protein)               :: 4,390
            Genes (RNA)                       :: 91
            rRNAs                             :: 2, 4, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 3 (16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 233
            CDSs (without protein)            :: 233
            Pseudo Genes (ambiguous residues) :: 0 of 233
            Pseudo Genes (frameshifted)       :: 74 of 233
            Pseudo Genes (incomplete)         :: 158 of 233
            Pseudo Genes (internal stop)      :: 39 of 233
            Pseudo Genes (multiple problems)  :: 35 of 233
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4724496
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="235 C8"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2019-10-17"
WGS         JBJNTN010000001-JBJNTN010000227
WGS_SCAFLD  NZ_JBJNTN010000001-NZ_JBJNTN010000227
//
LOCUS       NZ_JBJNTK010000000   4806187 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 163 I1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJNTK000000000
VERSION     NZ_JBJNTK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114929
            Assembly: GCF_045898095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4806187)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJNTK000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJNTK000000000.  This version of the project
            (01) has the accession number NZ_JBJNTK010000000, and consists of
            sequences JBJNTK010000001-JBJNTK010000110.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045898095.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 14:09:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,720
            CDSs (total)                      :: 4,628
            Genes (coding)                    :: 4,395
            CDSs (with protein)               :: 4,395
            Genes (RNA)                       :: 92
            rRNAs                             :: 6, 4, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 4, 3, 5 (5S, 16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 233
            CDSs (without protein)            :: 233
            Pseudo Genes (ambiguous residues) :: 0 of 233
            Pseudo Genes (frameshifted)       :: 74 of 233
            Pseudo Genes (incomplete)         :: 159 of 233
            Pseudo Genes (internal stop)      :: 42 of 233
            Pseudo Genes (multiple problems)  :: 35 of 233
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4806187
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="163 I1"
                     /isolation_source="Urines (Colonisation)"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2018-02-09"
WGS         JBJNTK010000001-JBJNTK010000110
WGS_SCAFLD  NZ_JBJNTK010000001-NZ_JBJNTK010000110
//
LOCUS       NZ_JBIHEA010000000   5571711 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E978, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHEA000000000
VERSION     NZ_JBIHEA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235305
            Assembly: GCF_045607705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5571711)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHEA000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHEA000000000.  This version of the project
            (01) has the accession number NZ_JBIHEA010000000, and consists of
            sequences JBIHEA010000001-JBIHEA010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 174x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045607705.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:07:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,621
            CDSs (total)                      :: 5,509
            Genes (coding)                    :: 5,088
            CDSs (with protein)               :: 5,088
            Genes (RNA)                       :: 112
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 421
            CDSs (without protein)            :: 421
            Pseudo Genes (ambiguous residues) :: 0 of 421
            Pseudo Genes (frameshifted)       :: 252 of 421
            Pseudo Genes (incomplete)         :: 215 of 421
            Pseudo Genes (internal stop)      :: 56 of 421
            Pseudo Genes (multiple problems)  :: 89 of 421
            Pseudo Genes (short protein)      :: 1 of 421
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5571711
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E978"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHEA010000001-JBIHEA010000006
WGS_SCAFLD  NZ_JBIHEA010000001-NZ_JBIHEA010000006
//
LOCUS       NZ_JBIHFS010000000   5057573 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E903, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHFS000000000
VERSION     NZ_JBIHFS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235243
            Assembly: GCF_045608525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5057573)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHFS000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHFS000000000.  This version of the project
            (01) has the accession number NZ_JBIHFS010000000, and consists of
            sequences JBIHFS010000001-JBIHFS010000012.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 377x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045608525.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:01:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,035
            CDSs (total)                      :: 4,913
            Genes (coding)                    :: 4,583
            CDSs (with protein)               :: 4,583
            Genes (RNA)                       :: 122
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 330
            CDSs (without protein)            :: 330
            Pseudo Genes (ambiguous residues) :: 0 of 330
            Pseudo Genes (frameshifted)       :: 164 of 330
            Pseudo Genes (incomplete)         :: 168 of 330
            Pseudo Genes (internal stop)      :: 48 of 330
            Pseudo Genes (multiple problems)  :: 47 of 330
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5057573
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E903"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHFS010000001-JBIHFS010000012
WGS_SCAFLD  NZ_JBIHFS010000001-NZ_JBIHFS010000012
//
LOCUS       NZ_JBIHGB010000000   5225994 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E891, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHGB000000000
VERSION     NZ_JBIHGB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235232
            Assembly: GCF_045608785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5225994)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHGB000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHGB000000000.  This version of the project
            (01) has the accession number NZ_JBIHGB010000000, and consists of
            sequences JBIHGB010000001-JBIHGB010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 146x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045608785.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:09:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,149
            CDSs (total)                      :: 5,027
            Genes (coding)                    :: 4,757
            CDSs (with protein)               :: 4,757
            Genes (RNA)                       :: 122
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 88
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 270
            CDSs (without protein)            :: 270
            Pseudo Genes (ambiguous residues) :: 0 of 270
            Pseudo Genes (frameshifted)       :: 130 of 270
            Pseudo Genes (incomplete)         :: 147 of 270
            Pseudo Genes (internal stop)      :: 50 of 270
            Pseudo Genes (multiple problems)  :: 51 of 270
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5225994
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E891"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHGB010000001-JBIHGB010000008
WGS_SCAFLD  NZ_JBIHGB010000001-NZ_JBIHGB010000008
//
LOCUS       NZ_JBIHGT010000000   5257525 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E865, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHGT000000000
VERSION     NZ_JBIHGT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235209
            Assembly: GCF_045609125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5257525)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHGT000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHGT000000000.  This version of the project
            (01) has the accession number NZ_JBIHGT010000000, and consists of
            sequences JBIHGT010000001-JBIHGT010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 466x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045609125.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:04:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,198
            CDSs (total)                      :: 5,077
            Genes (coding)                    :: 4,743
            CDSs (with protein)               :: 4,743
            Genes (RNA)                       :: 121
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 334
            CDSs (without protein)            :: 334
            Pseudo Genes (ambiguous residues) :: 0 of 334
            Pseudo Genes (frameshifted)       :: 164 of 334
            Pseudo Genes (incomplete)         :: 192 of 334
            Pseudo Genes (internal stop)      :: 36 of 334
            Pseudo Genes (multiple problems)  :: 52 of 334
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5257525
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E865"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHGT010000001-JBIHGT010000009
WGS_SCAFLD  NZ_JBIHGT010000001-NZ_JBIHGT010000009
//
LOCUS       NZ_JBIHIO010000000   4973191 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E794, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHIO000000000
VERSION     NZ_JBIHIO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235148
            Assembly: GCF_045610065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4973191)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHIO000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHIO000000000.  This version of the project
            (01) has the accession number NZ_JBIHIO010000000, and consists of
            sequences JBIHIO010000001-JBIHIO010000012.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 190x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045610065.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:11:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,913
            CDSs (total)                      :: 4,791
            Genes (coding)                    :: 4,430
            CDSs (with protein)               :: 4,430
            Genes (RNA)                       :: 122
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 361
            CDSs (without protein)            :: 361
            Pseudo Genes (ambiguous residues) :: 0 of 361
            Pseudo Genes (frameshifted)       :: 202 of 361
            Pseudo Genes (incomplete)         :: 172 of 361
            Pseudo Genes (internal stop)      :: 52 of 361
            Pseudo Genes (multiple problems)  :: 58 of 361
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4973191
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E794"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHIO010000001-JBIHIO010000012
WGS_SCAFLD  NZ_JBIHIO010000001-NZ_JBIHIO010000012
//
LOCUS       NZ_JBIHJS010000000   5228151 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E738, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHJS000000000
VERSION     NZ_JBIHJS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235103
            Assembly: GCF_045610665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5228151)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHJS000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHJS000000000.  This version of the project
            (01) has the accession number NZ_JBIHJS010000000, and consists of
            sequences JBIHJS010000001-JBIHJS010000017.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 251x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045610665.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:04:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,130
            CDSs (total)                      :: 5,015
            Genes (coding)                    :: 4,739
            CDSs (with protein)               :: 4,739
            Genes (RNA)                       :: 115
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 276
            CDSs (without protein)            :: 276
            Pseudo Genes (ambiguous residues) :: 0 of 276
            Pseudo Genes (frameshifted)       :: 160 of 276
            Pseudo Genes (incomplete)         :: 120 of 276
            Pseudo Genes (internal stop)      :: 39 of 276
            Pseudo Genes (multiple problems)  :: 39 of 276
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5228151
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E738"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHJS010000001-JBIHJS010000017
WGS_SCAFLD  NZ_JBIHJS010000001-NZ_JBIHJS010000017
//
LOCUS       NZ_JBIXAZ010000000   5598920 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1174, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXAZ000000000
VERSION     NZ_JBIXAZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247328
            Assembly: GCF_045619405.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5598920)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXAZ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXAZ000000000.  This version of the project
            (01) has the accession number NZ_JBIXAZ010000000, and consists of
            sequences JBIXAZ010000001-JBIXAZ010000010.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 311x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045619405.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:11:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,549
            CDSs (total)                      :: 5,425
            Genes (coding)                    :: 5,067
            CDSs (with protein)               :: 5,067
            Genes (RNA)                       :: 124
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 358
            CDSs (without protein)            :: 358
            Pseudo Genes (ambiguous residues) :: 0 of 358
            Pseudo Genes (frameshifted)       :: 199 of 358
            Pseudo Genes (incomplete)         :: 175 of 358
            Pseudo Genes (internal stop)      :: 51 of 358
            Pseudo Genes (multiple problems)  :: 60 of 358
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5598920
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1174"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXAZ010000001-JBIXAZ010000010
WGS_SCAFLD  NZ_JBIXAZ010000001-NZ_JBIXAZ010000010
//
LOCUS       NZ_JBIWZM010000000   5054281 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1219, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIWZM000000000
VERSION     NZ_JBIWZM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247367
            Assembly: GCF_045618605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5054281)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIWZM000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIWZM000000000.  This version of the project
            (01) has the accession number NZ_JBIWZM010000000, and consists of
            sequences JBIWZM010000001-JBIWZM010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 316x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045618605.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:15:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,955
            CDSs (total)                      :: 4,839
            Genes (coding)                    :: 4,488
            CDSs (with protein)               :: 4,488
            Genes (RNA)                       :: 116
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 351
            CDSs (without protein)            :: 351
            Pseudo Genes (ambiguous residues) :: 0 of 351
            Pseudo Genes (frameshifted)       :: 188 of 351
            Pseudo Genes (incomplete)         :: 175 of 351
            Pseudo Genes (internal stop)      :: 54 of 351
            Pseudo Genes (multiple problems)  :: 61 of 351
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5054281
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1219"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIWZM010000001-JBIWZM010000007
WGS_SCAFLD  NZ_JBIWZM010000001-NZ_JBIWZM010000007
//
LOCUS       NZ_JBIHBQ010000000   5360575 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E381, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHBQ000000000
VERSION     NZ_JBIHBQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235389
            Assembly: GCF_045585335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5360575)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHBQ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHBQ000000000.  This version of the project
            (01) has the accession number NZ_JBIHBQ010000000, and consists of
            sequences JBIHBQ010000001-JBIHBQ010000015.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 539x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045585335.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:56:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,347
            CDSs (total)                      :: 5,230
            Genes (coding)                    :: 4,948
            CDSs (with protein)               :: 4,948
            Genes (RNA)                       :: 117
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 282
            CDSs (without protein)            :: 282
            Pseudo Genes (ambiguous residues) :: 0 of 282
            Pseudo Genes (frameshifted)       :: 180 of 282
            Pseudo Genes (incomplete)         :: 111 of 282
            Pseudo Genes (internal stop)      :: 30 of 282
            Pseudo Genes (multiple problems)  :: 36 of 282
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5360575
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E381"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHBQ010000001-JBIHBQ010000015
WGS_SCAFLD  NZ_JBIHBQ010000001-NZ_JBIHBQ010000015
//
LOCUS       NZ_JBIHCR010000000   4882320 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1030, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHCR000000000
VERSION     NZ_JBIHCR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235350
            Assembly: GCF_045607005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4882320)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHCR000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHCR000000000.  This version of the project
            (01) has the accession number NZ_JBIHCR010000000, and consists of
            sequences JBIHCR010000001-JBIHCR010000002.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 582x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045607005.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:01:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,656
            CDSs (total)                      :: 4,539
            Genes (coding)                    :: 4,389
            CDSs (with protein)               :: 4,389
            Genes (RNA)                       :: 117
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 150
            CDSs (without protein)            :: 150
            Pseudo Genes (ambiguous residues) :: 0 of 150
            Pseudo Genes (frameshifted)       :: 95 of 150
            Pseudo Genes (incomplete)         :: 59 of 150
            Pseudo Genes (internal stop)      :: 10 of 150
            Pseudo Genes (multiple problems)  :: 12 of 150
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4882320
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1030"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHCR010000001-JBIHCR010000002
WGS_SCAFLD  NZ_JBIHCR010000001-NZ_JBIHCR010000002
//
LOCUS       NZ_JBIHDF010000000   5116595 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1009, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHDF000000000
VERSION     NZ_JBIHDF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235332
            Assembly: GCF_045607245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5116595)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHDF000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHDF000000000.  This version of the project
            (01) has the accession number NZ_JBIHDF010000000, and consists of
            sequences JBIHDF010000001-JBIHDF010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 251x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045607245.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:53:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,039
            CDSs (total)                      :: 4,923
            Genes (coding)                    :: 4,685
            CDSs (with protein)               :: 4,685
            Genes (RNA)                       :: 116
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 238
            CDSs (without protein)            :: 238
            Pseudo Genes (ambiguous residues) :: 0 of 238
            Pseudo Genes (frameshifted)       :: 145 of 238
            Pseudo Genes (incomplete)         :: 101 of 238
            Pseudo Genes (internal stop)      :: 32 of 238
            Pseudo Genes (multiple problems)  :: 37 of 238
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5116595
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1009"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHDF010000001-JBIHDF010000004
WGS_SCAFLD  NZ_JBIHDF010000001-NZ_JBIHDF010000004
//
LOCUS       NZ_JBIHDO010000000   5166826 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E997, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHDO000000000
VERSION     NZ_JBIHDO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235323
            Assembly: GCF_045607465.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5166826)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHDO000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHDO000000000.  This version of the project
            (01) has the accession number NZ_JBIHDO010000000, and consists of
            sequences JBIHDO010000001-JBIHDO010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 124x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045607465.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:09:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,133
            CDSs (total)                      :: 5,016
            Genes (coding)                    :: 4,797
            CDSs (with protein)               :: 4,797
            Genes (RNA)                       :: 117
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 219
            CDSs (without protein)            :: 219
            Pseudo Genes (ambiguous residues) :: 0 of 219
            Pseudo Genes (frameshifted)       :: 100 of 219
            Pseudo Genes (incomplete)         :: 113 of 219
            Pseudo Genes (internal stop)      :: 39 of 219
            Pseudo Genes (multiple problems)  :: 32 of 219
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5166826
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E997"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHDO010000001-JBIHDO010000006
WGS_SCAFLD  NZ_JBIHDO010000001-NZ_JBIHDO010000006
//
LOCUS       NZ_JBIHFH010000000   5380317 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E919, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHFH000000000
VERSION     NZ_JBIHFH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235256
            Assembly: GCF_045608345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5380317)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHFH000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHFH000000000.  This version of the project
            (01) has the accession number NZ_JBIHFH010000000, and consists of
            sequences JBIHFH010000001-JBIHFH010000011.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 231x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045608345.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:59:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,386
            CDSs (total)                      :: 5,272
            Genes (coding)                    :: 4,952
            CDSs (with protein)               :: 4,952
            Genes (RNA)                       :: 114
            rRNAs                             :: 7, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 320
            CDSs (without protein)            :: 320
            Pseudo Genes (ambiguous residues) :: 0 of 320
            Pseudo Genes (frameshifted)       :: 170 of 320
            Pseudo Genes (incomplete)         :: 176 of 320
            Pseudo Genes (internal stop)      :: 40 of 320
            Pseudo Genes (multiple problems)  :: 58 of 320
            Pseudo Genes (short protein)      :: 1 of 320
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5380317
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E919"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHFH010000001-JBIHFH010000011
WGS_SCAFLD  NZ_JBIHFH010000001-NZ_JBIHFH010000011
//
LOCUS       NZ_JARTZL010000000   5134702 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 511416-22, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JARTZL000000000
VERSION     NZ_JARTZL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34004160
            Assembly: GCF_045796025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5134702)
  AUTHORS   Irimaso,E., Keinprecht,H., Szostak,M.P., Cabal Rosel,A., Stessl,B.,
            Desvars-Larrive,A., Ntakirutimana,C., Masengesho,G., Fischer,O.W.,
            Wittek,T., Mueller,E., Fessler,A.T., Braun,S.F., Schwarz,S.,
            Monecke,S., Ehricht,R., Spergser,J., Ruppitsch,W. and Loncaric,I.
  TITLE     Presence of broad-spectrum cephalosporin-resistant Enterobacterales
            isolated from ruminants in Rwanda
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5134702)
  AUTHORS   Szostak,M.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-MAR-2023) Department of Pathobiology, Institute of
            Microbiology, Veterinary University Vienna, Veterinaerplatz 1,
            Vienna 1210, Austria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARTZL000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JARTZL000000000.  This version of the project
            (01) has the accession number NZ_JARTZL010000000, and consists of
            sequences JARTZL010000001-JARTZL010000479.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 53x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045796025.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:02:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,294
            CDSs (total)                      :: 5,210
            Genes (coding)                    :: 4,932
            CDSs (with protein)               :: 4,932
            Genes (RNA)                       :: 84
            rRNAs                             :: 2, 5, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 5, 4 (16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 278
            CDSs (without protein)            :: 278
            Pseudo Genes (ambiguous residues) :: 0 of 278
            Pseudo Genes (frameshifted)       :: 71 of 278
            Pseudo Genes (incomplete)         :: 214 of 278
            Pseudo Genes (internal stop)      :: 39 of 278
            Pseudo Genes (multiple problems)  :: 40 of 278
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5134702
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="511416-22"
                     /host="cattle"
                     /db_xref="taxon:562"
                     /geo_loc_name="Rwanda: Musanze"
                     /collection_date="2021"
                     /collected_by="Helga Keinprecht"
WGS         JARTZL010000001-JARTZL010000479
WGS_SCAFLD  NZ_JARTZL010000001-NZ_JARTZL010000479
//
LOCUS       NZ_JBIHHK010000000   5940588 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E841, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHHK000000000
VERSION     NZ_JBIHHK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235188
            Assembly: GCF_045609445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5940588)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHHK000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHHK000000000.  This version of the project
            (01) has the accession number NZ_JBIHHK010000000, and consists of
            sequences JBIHHK010000001-JBIHHK010000024.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 335x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045609445.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:14:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,902
            CDSs (total)                      :: 5,788
            Genes (coding)                    :: 5,316
            CDSs (with protein)               :: 5,316
            Genes (RNA)                       :: 114
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 472
            CDSs (without protein)            :: 472
            Pseudo Genes (ambiguous residues) :: 0 of 472
            Pseudo Genes (frameshifted)       :: 271 of 472
            Pseudo Genes (incomplete)         :: 256 of 472
            Pseudo Genes (internal stop)      :: 55 of 472
            Pseudo Genes (multiple problems)  :: 94 of 472
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5940588
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E841"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHHK010000001-JBIHHK010000024
WGS_SCAFLD  NZ_JBIHHK010000001-NZ_JBIHHK010000024
//
LOCUS       NZ_NKMX01000000      5304548 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain MOD1-EC2314, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NKMX00000000
VERSION     NZ_NKMX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05597612
            Assembly: GCF_002509965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5304548)
  AUTHORS   Gangiredla,J., Mammel,M.K., Barnaba,T.J., Tartera,C., Gebru,S.T.,
            Patel,I.R., Leonard,S.R., Kotewicz,M.L., Lampel,K.A., Elkins,C.A.
            and Lacher,D.W.
  TITLE     Species-Wide Collection of Escherichia coli Isolates for
            Examination of Genomic Diversity
  JOURNAL   Genome Announc 5 (50), e01321-17 (2017)
   PUBMED   29242221
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5304548)
  AUTHORS   Gangiredla,J., Barnaba,T., Gebru,S., Mammel,M.K., Lacher,D.,
            Tartera,C., Patel,I.R., Leonard,S., Lampel,K.A. and Elkins,C.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JUN-2017) CFSAN-ORS-DM-MMSB, US Food and Drug
            Administration, 5100 Paint Branch Parkway, College Park, MD 20740,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NKMX00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_NKMX00000000.  This version of the project
            (01) has the accession number NZ_NKMX01000000, and consists of
            sequences NKMX01000001-NKMX01000337.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 41.7x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002509965.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:39:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,478
            CDSs (total)                      :: 5,380
            Genes (coding)                    :: 4,996
            CDSs (with protein)               :: 4,996
            Genes (RNA)                       :: 98
            rRNAs                             :: 9, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 8, 2 (5S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 384
            CDSs (without protein)            :: 384
            Pseudo Genes (ambiguous residues) :: 0 of 384
            Pseudo Genes (frameshifted)       :: 106 of 384
            Pseudo Genes (incomplete)         :: 283 of 384
            Pseudo Genes (internal stop)      :: 57 of 384
            Pseudo Genes (multiple problems)  :: 52 of 384
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5304548
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="MOD1-EC2314"
                     /serotype="O145"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA: LA"
                     /collection_date="2012-05"
                     /collected_by="CDC"
WGS         NKMX01000001-NKMX01000337
WGS_SCAFLD  NZ_NKMX01000001-NZ_NKMX01000337
//
LOCUS       NZ_JBIHIR010000000   5294020 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E788, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHIR000000000
VERSION     NZ_JBIHIR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235143
            Assembly: GCF_045610145.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5294020)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHIR000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHIR000000000.  This version of the project
            (01) has the accession number NZ_JBIHIR010000000, and consists of
            sequences JBIHIR010000001-JBIHIR010000003.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 292x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045610145.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:15:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,275
            CDSs (total)                      :: 5,158
            Genes (coding)                    :: 4,842
            CDSs (with protein)               :: 4,842
            Genes (RNA)                       :: 117
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 316
            CDSs (without protein)            :: 316
            Pseudo Genes (ambiguous residues) :: 1 of 316
            Pseudo Genes (frameshifted)       :: 174 of 316
            Pseudo Genes (incomplete)         :: 167 of 316
            Pseudo Genes (internal stop)      :: 46 of 316
            Pseudo Genes (multiple problems)  :: 60 of 316
            Pseudo Genes (short protein)      :: 1 of 316
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5294020
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E788"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHIR010000001-JBIHIR010000003
WGS_SCAFLD  NZ_JBIHIR010000001-NZ_JBIHIR010000003
//
LOCUS       NZ_JBIHIW010000000   4845101 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E779, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHIW000000000
VERSION     NZ_JBIHIW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235136
            Assembly: GCF_045610245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4845101)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHIW000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHIW000000000.  This version of the project
            (01) has the accession number NZ_JBIHIW010000000, and consists of
            sequences JBIHIW010000001-JBIHIW010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 326x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045610245.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:58:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,680
            CDSs (total)                      :: 4,564
            Genes (coding)                    :: 4,330
            CDSs (with protein)               :: 4,330
            Genes (RNA)                       :: 116
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 234
            CDSs (without protein)            :: 234
            Pseudo Genes (ambiguous residues) :: 0 of 234
            Pseudo Genes (frameshifted)       :: 102 of 234
            Pseudo Genes (incomplete)         :: 122 of 234
            Pseudo Genes (internal stop)      :: 42 of 234
            Pseudo Genes (multiple problems)  :: 30 of 234
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4845101
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E779"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHIW010000001-JBIHIW010000004
WGS_SCAFLD  NZ_JBIHIW010000001-NZ_JBIHIW010000004
//
LOCUS       NZ_JBIHKQ010000000   5092400 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E701, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHKQ000000000
VERSION     NZ_JBIHKQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235073
            Assembly: GCF_045611125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5092400)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHKQ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHKQ000000000.  This version of the project
            (01) has the accession number NZ_JBIHKQ010000000, and consists of
            sequences JBIHKQ010000001-JBIHKQ010000014.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 148x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045611125.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:28:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,023
            CDSs (total)                      :: 4,898
            Genes (coding)                    :: 4,578
            CDSs (with protein)               :: 4,578
            Genes (RNA)                       :: 125
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 90
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 320
            CDSs (without protein)            :: 320
            Pseudo Genes (ambiguous residues) :: 0 of 320
            Pseudo Genes (frameshifted)       :: 151 of 320
            Pseudo Genes (incomplete)         :: 166 of 320
            Pseudo Genes (internal stop)      :: 58 of 320
            Pseudo Genes (multiple problems)  :: 49 of 320
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5092400
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E701"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHKQ010000001-JBIHKQ010000014
WGS_SCAFLD  NZ_JBIHKQ010000001-NZ_JBIHKQ010000014
//
LOCUS       NZ_JBGMPF010000000   4960245 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-E01-PYO-15, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMPF000000000
VERSION     NZ_JBGMPF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076770
            Assembly: GCF_045797325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4960245)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4960245)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMPF000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMPF000000000.  This version of the project
            (01) has the accession number NZ_JBGMPF010000000, and consists of
            sequences JBGMPF010000001-JBGMPF010000082.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 16-OCT-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 99x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797325.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:12:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,766
            CDSs (total)                      :: 4,666
            Genes (coding)                    :: 4,461
            CDSs (with protein)               :: 4,461
            Genes (RNA)                       :: 100
            rRNAs                             :: 10, 3, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 9, 2, 5 (5S, 16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 205
            CDSs (without protein)            :: 205
            Pseudo Genes (ambiguous residues) :: 0 of 205
            Pseudo Genes (frameshifted)       :: 80 of 205
            Pseudo Genes (incomplete)         :: 149 of 205
            Pseudo Genes (internal stop)      :: 33 of 205
            Pseudo Genes (multiple problems)  :: 50 of 205
            Pseudo Genes (short protein)      :: 1 of 205
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4960245
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-E01-PYO-15"
                     /isolation_source="Uterus"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2019-09-06"
WGS         JBGMPF010000001-JBGMPF010000082
WGS_SCAFLD  NZ_JBGMPF010000001-NZ_JBGMPF010000082
//
LOCUS       NZ_JBIWZA010000000   5398784 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1233, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIWZA000000000
VERSION     NZ_JBIWZA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247379
            Assembly: GCF_045618385.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5398784)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIWZA000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIWZA000000000.  This version of the project
            (01) has the accession number NZ_JBIWZA010000000, and consists of
            sequences JBIWZA010000001-JBIWZA010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 151x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045618385.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:31:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,315
            CDSs (total)                      :: 5,194
            Genes (coding)                    :: 4,916
            CDSs (with protein)               :: 4,916
            Genes (RNA)                       :: 121
            rRNAs                             :: 8, 8, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            tRNAs                             :: 93
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 278
            CDSs (without protein)            :: 278
            Pseudo Genes (ambiguous residues) :: 0 of 278
            Pseudo Genes (frameshifted)       :: 143 of 278
            Pseudo Genes (incomplete)         :: 155 of 278
            Pseudo Genes (internal stop)      :: 40 of 278
            Pseudo Genes (multiple problems)  :: 55 of 278
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5398784
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1233"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIWZA010000001-JBIWZA010000008
WGS_SCAFLD  NZ_JBIWZA010000001-NZ_JBIWZA010000008
//
LOCUS       NZ_JBIXAH010000000   5566333 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1194, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXAH000000000
VERSION     NZ_JBIXAH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247346
            Assembly: GCF_045619045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5566333)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXAH000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXAH000000000.  This version of the project
            (01) has the accession number NZ_JBIXAH010000000, and consists of
            sequences JBIXAH010000001-JBIXAH010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 256x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045619045.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:11:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,562
            CDSs (total)                      :: 5,450
            Genes (coding)                    :: 5,121
            CDSs (with protein)               :: 5,121
            Genes (RNA)                       :: 112
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 329
            CDSs (without protein)            :: 329
            Pseudo Genes (ambiguous residues) :: 0 of 329
            Pseudo Genes (frameshifted)       :: 167 of 329
            Pseudo Genes (incomplete)         :: 198 of 329
            Pseudo Genes (internal stop)      :: 40 of 329
            Pseudo Genes (multiple problems)  :: 67 of 329
            Pseudo Genes (short protein)      :: 1 of 329
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5566333
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1194"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXAH010000001-JBIXAH010000006
WGS_SCAFLD  NZ_JBIXAH010000001-NZ_JBIXAH010000006
//
LOCUS       NZ_JBGMQC010000000   4737807 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-A02-PYO-49, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMQC000000000
VERSION     NZ_JBGMQC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076747
            Assembly: GCF_045797785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4737807)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4737807)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMQC000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMQC000000000.  This version of the project
            (01) has the accession number NZ_JBGMQC010000000, and consists of
            sequences JBGMQC010000001-JBGMQC010000044.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 23-SEP-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 107x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797785.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:04:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,590
            CDSs (total)                      :: 4,497
            Genes (coding)                    :: 4,355
            CDSs (with protein)               :: 4,355
            Genes (RNA)                       :: 93
            rRNAs                             :: 5, 4, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 4, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 142
            CDSs (without protein)            :: 142
            Pseudo Genes (ambiguous residues) :: 0 of 142
            Pseudo Genes (frameshifted)       :: 52 of 142
            Pseudo Genes (incomplete)         :: 99 of 142
            Pseudo Genes (internal stop)      :: 27 of 142
            Pseudo Genes (multiple problems)  :: 34 of 142
            Pseudo Genes (short protein)      :: 1 of 142
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4737807
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-A02-PYO-49"
                     /isolation_source="urine"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2020-01-23"
WGS         JBGMQC010000001-JBGMQC010000044
WGS_SCAFLD  NZ_JBGMQC010000001-NZ_JBGMQC010000044
//
LOCUS       NZ_NOOF01000000      4852177 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain MOD1-EC6939, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NOOF00000000
VERSION     NZ_NOOF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04992305
            Assembly: GCF_002519485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4852177)
  AUTHORS   Gangiredla,J., Mammel,M.K., Barnaba,T.J., Tartera,C., Gebru,S.T.,
            Patel,I.R., Leonard,S.R., Kotewicz,M.L., Lampel,K.A., Elkins,C.A.
            and Lacher,D.W.
  TITLE     Species-Wide Collection of Escherichia coli Isolates for
            Examination of Genomic Diversity
  JOURNAL   Genome Announc 5 (50), e01321-17 (2017)
   PUBMED   29242221
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4852177)
  AUTHORS   Gangiredla,J., Lacher,D.W., Mammel,M.K., Barnaba,T., Tartera,C.,
            Gebru,S., Patel,I.R., Leonard,S.R., Lampel,K.A. and Elkins,C.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-JUL-2017) CFSAN-ORS-DM-MMSB, US Food and Drug
            Administration, 5100 Paint Branch Parkway, College Park, MD 20740,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NOOF00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_NOOF00000000.  This version of the project
            (01) has the accession number NZ_NOOF01000000, and consists of
            sequences NOOF01000001-NOOF01000146.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 54.2x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002519485.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:38:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,867
            CDSs (total)                      :: 4,777
            Genes (coding)                    :: 4,555
            CDSs (with protein)               :: 4,555
            Genes (RNA)                       :: 90
            rRNAs                             :: 6, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 1 (5S, 16S)
            tRNAs                             :: 72
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 222
            CDSs (without protein)            :: 222
            Pseudo Genes (ambiguous residues) :: 0 of 222
            Pseudo Genes (frameshifted)       :: 62 of 222
            Pseudo Genes (incomplete)         :: 150 of 222
            Pseudo Genes (internal stop)      :: 40 of 222
            Pseudo Genes (multiple problems)  :: 27 of 222
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4852177
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="MOD1-EC6939"
                     /isolation_source="bladder"
                     /host="porcine"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA"
                     /collection_date="1997-10-06"
                     /collected_by="Pennsylvania State University| Escherichia
                     coli Reference Center"
WGS         NOOF01000001-NOOF01000146
WGS_SCAFLD  NZ_NOOF01000001-NZ_NOOF01000146
//
LOCUS       NZ_JAIHKI010000000   4946228 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 41335, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAIHKI000000000
VERSION     NZ_JAIHKI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN20150311
            Assembly: GCF_020668795.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4946228)
  AUTHORS   Vogt,N.A., Hetman,B.M., Pearl,D.L., Vogt,A.A., Reid-Smith,R.J.,
            Parmley,E.J., Janecko,N., Bharat,A., Mulvey,M.R., Ricker,N.,
            Bondo,K.J., Allen,S.E. and Jardine,C.M.
  TITLE     Using whole-genome sequence data to examine the epidemiology of
            Salmonella, Escherichia coli and associated antimicrobial
            resistance in raccoons (Procyon lotor), swine manure pits, and soil
            samples on swine farms in southern Ontario, Canada
  JOURNAL   PLoS One 16 (11), e0260234 (2021)
   PUBMED   34793571
  REMARK    Erratum:[PLoS One. 2024 Jul 29;19(7):e0308217. doi:
            10.1371/journal.pone.0308217. PMID: 39074101]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4946228)
  AUTHORS   Vogt,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-JUL-2021) Population Medicine, University of Guelph,
            50 Stone Road East, Guelph N1G2W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIHKI000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JAIHKI000000000.  This version of the project
            (01) has the accession number NZ_JAIHKI010000000, and consists of
            sequences JAIHKI010000001-JAIHKI010000148.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. 1.0.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 64x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_020668795.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:47:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,902
            CDSs (total)                      :: 4,804
            Genes (coding)                    :: 4,615
            CDSs (with protein)               :: 4,615
            Genes (RNA)                       :: 98
            rRNAs                             :: 7, 8, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 6, 8, 2 (5S, 16S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 189
            CDSs (without protein)            :: 189
            Pseudo Genes (ambiguous residues) :: 0 of 189
            Pseudo Genes (frameshifted)       :: 77 of 189
            Pseudo Genes (incomplete)         :: 109 of 189
            Pseudo Genes (internal stop)      :: 44 of 189
            Pseudo Genes (multiple problems)  :: 39 of 189
            Pseudo Genes (short protein)      :: 1 of 189
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4946228
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="41335"
                     /isolation_source="Swine manure pit"
                     /db_xref="taxon:562"
                     /geo_loc_name="Canada: Guelph"
                     /collection_date="2013-07-08"
                     /collected_by="University of Guelph"
WGS         JAIHKI010000001-JAIHKI010000148
WGS_SCAFLD  NZ_JAIHKI010000001-NZ_JAIHKI010000148
//
LOCUS       NZ_JBIXCO010000000   5208887 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1126, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXCO000000000
VERSION     NZ_JBIXCO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247287
            Assembly: GCF_045620265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5208887)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXCO000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXCO000000000.  This version of the project
            (01) has the accession number NZ_JBIXCO010000000, and consists of
            sequences JBIXCO010000001-JBIXCO010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 602x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045620265.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:20:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,199
            CDSs (total)                      :: 5,076
            Genes (coding)                    :: 4,848
            CDSs (with protein)               :: 4,848
            Genes (RNA)                       :: 123
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 92
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 228
            CDSs (without protein)            :: 228
            Pseudo Genes (ambiguous residues) :: 0 of 228
            Pseudo Genes (frameshifted)       :: 119 of 228
            Pseudo Genes (incomplete)         :: 112 of 228
            Pseudo Genes (internal stop)      :: 28 of 228
            Pseudo Genes (multiple problems)  :: 30 of 228
            Pseudo Genes (short protein)      :: 1 of 228
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5208887
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1126"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXCO010000001-JBIXCO010000008
WGS_SCAFLD  NZ_JBIXCO010000001-NZ_JBIXCO010000008
//
LOCUS       NZ_JAQRGE010000000   5570310 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 76-2-1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAQRGE000000000
VERSION     NZ_JAQRGE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN23704833
            Assembly: GCF_028597705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5570310)
  AUTHORS   Cormier,A.C., Chalmers,G., Zamudio,R., Mulvey,M.R., Mather,A.E. and
            Boerlin,P.
  TITLE     Diversity of blaCTX-M-1-carrying plasmids recovered from
            Escherichia coli isolated from Canadian domestic animals
  JOURNAL   PLoS One 17 (3), e0264439 (2022)
   PUBMED   35294479
  REMARK    Erratum:[PLoS One. 2024 Apr 9;19(4):e0302193. doi:
            10.1371/journal.pone.0302193. PMID: 38593168]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5570310)
  AUTHORS   Cormier,A.C., Chalmers,G., Zhang,P., Mulvey,M.R. and Boerlin,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-FEB-2023) Pathobiology, University of Guelph, 50
            Stone Road East, Guelph, Ontario N1G 2W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAQRGE000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JAQRGE000000000.  This version of the project
            (01) has the accession number NZ_JAQRGE010000000, and consists of
            sequences JAQRGE010000001-JAQRGE010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 243x
            Sequencing Technology  :: Oxford nanopore; Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_028597705.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:55:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,455
            CDSs (total)                      :: 5,340
            Genes (coding)                    :: 5,113
            CDSs (with protein)               :: 5,113
            Genes (RNA)                       :: 115
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 227
            CDSs (without protein)            :: 227
            Pseudo Genes (ambiguous residues) :: 0 of 227
            Pseudo Genes (frameshifted)       :: 82 of 227
            Pseudo Genes (incomplete)         :: 157 of 227
            Pseudo Genes (internal stop)      :: 31 of 227
            Pseudo Genes (multiple problems)  :: 41 of 227
            Pseudo Genes (short protein)      :: 1 of 227
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5570310
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="76-2-1"
                     /isolation_source="Cecal"
                     /host="chicken"
                     /db_xref="taxon:562"
                     /geo_loc_name="Canada"
                     /collection_date="2015"
WGS         JAQRGE010000001-JAQRGE010000004
WGS_SCAFLD  NZ_JAQRGE010000001-NZ_JAQRGE010000004
//
LOCUS       NZ_JBIXDX010000000   5165155 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1088, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXDX000000000
VERSION     NZ_JBIXDX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247252
            Assembly: GCF_045620945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5165155)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXDX000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXDX000000000.  This version of the project
            (01) has the accession number NZ_JBIXDX010000000, and consists of
            sequences JBIXDX010000001-JBIXDX010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 537x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045620945.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:28:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,077
            CDSs (total)                      :: 4,957
            Genes (coding)                    :: 4,723
            CDSs (with protein)               :: 4,723
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 235
            CDSs (without protein)            :: 234
            Pseudo Genes (ambiguous residues) :: 0 of 235
            Pseudo Genes (frameshifted)       :: 144 of 235
            Pseudo Genes (incomplete)         :: 100 of 235
            Pseudo Genes (internal stop)      :: 23 of 235
            Pseudo Genes (multiple problems)  :: 30 of 235
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5165155
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1088"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXDX010000001-JBIXDX010000006
WGS_SCAFLD  NZ_JBIXDX010000001-NZ_JBIXDX010000006
//
LOCUS       NZ_JBIXEV010000000   5460419 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1058, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXEV000000000
VERSION     NZ_JBIXEV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247228
            Assembly: GCF_045621425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5460419)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXEV000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXEV000000000.  This version of the project
            (01) has the accession number NZ_JBIXEV010000000, and consists of
            sequences JBIXEV010000001-JBIXEV010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 453x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045621425.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:22:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,488
            CDSs (total)                      :: 5,378
            Genes (coding)                    :: 4,975
            CDSs (with protein)               :: 4,975
            Genes (RNA)                       :: 110
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 403
            CDSs (without protein)            :: 403
            Pseudo Genes (ambiguous residues) :: 0 of 403
            Pseudo Genes (frameshifted)       :: 234 of 403
            Pseudo Genes (incomplete)         :: 209 of 403
            Pseudo Genes (internal stop)      :: 52 of 403
            Pseudo Genes (multiple problems)  :: 80 of 403
            Pseudo Genes (short protein)      :: 1 of 403
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5460419
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1058"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXEV010000001-JBIXEV010000004
WGS_SCAFLD  NZ_JBIXEV010000001-NZ_JBIXEV010000004
//
LOCUS       NZ_CAYQIA010000000   5007091 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain uvzsr-PT_24_00032-A01-AR_24_00008839, whole
            genome shotgun sequencing project.
ACCESSION   NZ_CAYQIA000000000
VERSION     NZ_CAYQIA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117473794
            Assembly: GCF_964417415.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5007091)
  CONSRTM   Science Park
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2024) Science Park of Comenius University of
            Bratislava, Ilkovicova 8, 841 04 Bratislava, Slovakia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAYQIA000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_CAYQIA000000000.  This version of the project
            (01) has the accession number NZ_CAYQIA010000000, and consists of
            sequences CAYQIA010000001-CAYQIA010000239.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964417415.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:43:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,988
            CDSs (total)                      :: 4,900
            Genes (coding)                    :: 4,659
            CDSs (with protein)               :: 4,659
            Genes (RNA)                       :: 88
            rRNAs                             :: 2, 3 (16S, 23S)
            partial rRNAs                     :: 2, 3 (16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 241
            CDSs (without protein)            :: 241
            Pseudo Genes (ambiguous residues) :: 0 of 241
            Pseudo Genes (frameshifted)       :: 72 of 241
            Pseudo Genes (incomplete)         :: 182 of 241
            Pseudo Genes (internal stop)      :: 35 of 241
            Pseudo Genes (multiple problems)  :: 43 of 241
            Pseudo Genes (short protein)      :: 1 of 241
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5007091
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="uvzsr-PT_24_00032-A01-AR_24_00008839"
                     /isolation_source="urine (permanent catheter)"
                     /db_xref="taxon:562"
                     /geo_loc_name="Slovakia"
WGS         CAYQIA010000001-CAYQIA010000239
WGS_SCAFLD  NZ_CAYQIA010000001-NZ_CAYQIA010000239
//
LOCUS       NZ_JBIXFP010000000   5195252 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1036, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXFP000000000
VERSION     NZ_JBIXFP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247208
            Assembly: GCF_045621865.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5195252)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXFP000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXFP000000000.  This version of the project
            (01) has the accession number NZ_JBIXFP010000000, and consists of
            sequences JBIXFP010000001-JBIXFP010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 105x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045621865.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:27:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,138
            CDSs (total)                      :: 5,011
            Genes (coding)                    :: 4,796
            CDSs (with protein)               :: 4,796
            Genes (RNA)                       :: 127
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 18
            Pseudo Genes (total)              :: 215
            CDSs (without protein)            :: 215
            Pseudo Genes (ambiguous residues) :: 0 of 215
            Pseudo Genes (frameshifted)       :: 123 of 215
            Pseudo Genes (incomplete)         :: 114 of 215
            Pseudo Genes (internal stop)      :: 22 of 215
            Pseudo Genes (multiple problems)  :: 39 of 215
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5195252
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1036"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXFP010000001-JBIXFP010000009
WGS_SCAFLD  NZ_JBIXFP010000001-NZ_JBIXFP010000009
//
LOCUS       NZ_JBGMOM010000000   5131783 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-H04-PYO-239, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMOM000000000
VERSION     NZ_JBGMOM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076789
            Assembly: GCF_045796705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5131783)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5131783)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMOM000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMOM000000000.  This version of the project
            (01) has the accession number NZ_JBGMOM010000000, and consists of
            sequences JBGMOM010000001-JBGMOM010000276.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-NOV-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 102x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045796705.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:19:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,239
            CDSs (total)                      :: 5,133
            Genes (coding)                    :: 4,865
            CDSs (with protein)               :: 4,865
            Genes (RNA)                       :: 106
            rRNAs                             :: 5, 5, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 3, 5, 2 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 268
            CDSs (without protein)            :: 268
            Pseudo Genes (ambiguous residues) :: 6 of 268
            Pseudo Genes (frameshifted)       :: 72 of 268
            Pseudo Genes (incomplete)         :: 196 of 268
            Pseudo Genes (internal stop)      :: 31 of 268
            Pseudo Genes (multiple problems)  :: 35 of 268
            Pseudo Genes (short protein)      :: 1 of 268
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5131783
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-H04-PYO-239"
                     /isolation_source="Uterus"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2021-07-09"
WGS         JBGMOM010000001-JBGMOM010000276
WGS_SCAFLD  NZ_JBGMOM010000001-NZ_JBGMOM010000276
//
LOCUS       NZ_JARTYY010000000   4621888 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 511429-22, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JARTYY000000000
VERSION     NZ_JARTYY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34004173
            Assembly: GCF_045795805.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4621888)
  AUTHORS   Irimaso,E., Keinprecht,H., Szostak,M.P., Cabal Rosel,A., Stessl,B.,
            Desvars-Larrive,A., Ntakirutimana,C., Masengesho,G., Fischer,O.W.,
            Wittek,T., Mueller,E., Fessler,A.T., Braun,S.F., Schwarz,S.,
            Monecke,S., Ehricht,R., Spergser,J., Ruppitsch,W. and Loncaric,I.
  TITLE     Presence of broad-spectrum cephalosporin-resistant Enterobacterales
            isolated from ruminants in Rwanda
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4621888)
  AUTHORS   Szostak,M.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-MAR-2023) Department of Pathobiology, Institute of
            Microbiology, Veterinary University Vienna, Veterinaerplatz 1,
            Vienna 1210, Austria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARTYY000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JARTYY000000000.  This version of the project
            (01) has the accession number NZ_JARTYY010000000, and consists of
            sequences JARTYY010000001-JARTYY010000376.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 47x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795805.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:58:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,589
            CDSs (total)                      :: 4,495
            Genes (coding)                    :: 4,273
            CDSs (with protein)               :: 4,273
            Genes (RNA)                       :: 94
            rRNAs                             :: 2, 3, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3, 5 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 222
            CDSs (without protein)            :: 222
            Pseudo Genes (ambiguous residues) :: 0 of 222
            Pseudo Genes (frameshifted)       :: 59 of 222
            Pseudo Genes (incomplete)         :: 168 of 222
            Pseudo Genes (internal stop)      :: 28 of 222
            Pseudo Genes (multiple problems)  :: 31 of 222
            Pseudo Genes (short protein)      :: 1 of 222
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4621888
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="511429-22"
                     /host="goat"
                     /db_xref="taxon:562"
                     /geo_loc_name="Rwanda: Musanze"
                     /collection_date="2021"
                     /collected_by="Helga Keinprecht"
WGS         JARTYY010000001-JARTYY010000376
WGS_SCAFLD  NZ_JARTYY010000001-NZ_JARTYY010000376
//
LOCUS       NZ_JBJLYH010000000   4705229 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 241 C2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLYH000000000
VERSION     NZ_JBJLYH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114959
            Assembly: GCF_045799035.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4705229)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLYH000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLYH000000000.  This version of the project
            (01) has the accession number NZ_JBJLYH010000000, and consists of
            sequences JBJLYH010000001-JBJLYH010000173.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799035.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:23:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,800
            CDSs (total)                      :: 4,697
            Genes (coding)                    :: 4,431
            CDSs (with protein)               :: 4,431
            Genes (RNA)                       :: 103
            rRNAs                             :: 7, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 5, 3, 2 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 266
            CDSs (without protein)            :: 266
            Pseudo Genes (ambiguous residues) :: 0 of 266
            Pseudo Genes (frameshifted)       :: 70 of 266
            Pseudo Genes (incomplete)         :: 193 of 266
            Pseudo Genes (internal stop)      :: 40 of 266
            Pseudo Genes (multiple problems)  :: 35 of 266
            Pseudo Genes (short protein)      :: 1 of 266
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4705229
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="241 C2"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2019-12-04"
WGS         JBJLYH010000001-JBJLYH010000173
WGS_SCAFLD  NZ_JBJLYH010000001-NZ_JBJLYH010000173
//
LOCUS       NZ_JBGMOU010000000   4737892 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-G01-PYO-46, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMOU000000000
VERSION     NZ_JBGMOU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076781
            Assembly: GCF_045797065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4737892)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4737892)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMOU000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMOU000000000.  This version of the project
            (01) has the accession number NZ_JBGMOU010000000, and consists of
            sequences JBGMOU010000001-JBGMOU010000043.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 27-OCT-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 109x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797065.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:12:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,592
            CDSs (total)                      :: 4,498
            Genes (coding)                    :: 4,356
            CDSs (with protein)               :: 4,356
            Genes (RNA)                       :: 94
            rRNAs                             :: 6, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 4, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 142
            CDSs (without protein)            :: 142
            Pseudo Genes (ambiguous residues) :: 0 of 142
            Pseudo Genes (frameshifted)       :: 52 of 142
            Pseudo Genes (incomplete)         :: 98 of 142
            Pseudo Genes (internal stop)      :: 27 of 142
            Pseudo Genes (multiple problems)  :: 33 of 142
            Pseudo Genes (short protein)      :: 1 of 142
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4737892
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-G01-PYO-46"
                     /isolation_source="urine"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2020-01-12"
WGS         JBGMOU010000001-JBGMOU010000043
WGS_SCAFLD  NZ_JBGMOU010000001-NZ_JBGMOU010000043
//
LOCUS       NZ_JARTZX010000000   4614113 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 511404-22, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JARTZX000000000
VERSION     NZ_JARTZX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34004148
            Assembly: GCF_045796365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4614113)
  AUTHORS   Irimaso,E., Keinprecht,H., Szostak,M.P., Cabal Rosel,A., Stessl,B.,
            Desvars-Larrive,A., Ntakirutimana,C., Masengesho,G., Fischer,O.W.,
            Wittek,T., Mueller,E., Fessler,A.T., Braun,S.F., Schwarz,S.,
            Monecke,S., Ehricht,R., Spergser,J., Ruppitsch,W. and Loncaric,I.
  TITLE     Presence of broad-spectrum cephalosporin-resistant Enterobacterales
            isolated from ruminants in Rwanda
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4614113)
  AUTHORS   Szostak,M.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-MAR-2023) Department of Pathobiology, Institute of
            Microbiology, Veterinary University Vienna, Veterinaerplatz 1,
            Vienna 1210, Austria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARTZX000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JARTZX000000000.  This version of the project
            (01) has the accession number NZ_JARTZX010000000, and consists of
            sequences JARTZX010000001-JARTZX010000237.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 53x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045796365.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:03:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,518
            CDSs (total)                      :: 4,427
            Genes (coding)                    :: 4,236
            CDSs (with protein)               :: 4,236
            Genes (RNA)                       :: 91
            rRNAs                             :: 3, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 3, 4 (5S, 16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 191
            CDSs (without protein)            :: 191
            Pseudo Genes (ambiguous residues) :: 0 of 191
            Pseudo Genes (frameshifted)       :: 49 of 191
            Pseudo Genes (incomplete)         :: 140 of 191
            Pseudo Genes (internal stop)      :: 33 of 191
            Pseudo Genes (multiple problems)  :: 27 of 191
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4614113
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="511404-22"
                     /host="cattle"
                     /db_xref="taxon:562"
                     /geo_loc_name="Rwanda: Musanze"
                     /collection_date="2021"
                     /collected_by="Helga Keinprecht"
WGS         JARTZX010000001-JARTZX010000237
WGS_SCAFLD  NZ_JARTZX010000001-NZ_JARTZX010000237
//
LOCUS       NZ_JBJLXL010000000   5079740 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 167 J10, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLXL000000000
VERSION     NZ_JBJLXL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114934
            Assembly: GCF_045799335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5079740)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLXL000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLXL000000000.  This version of the project
            (01) has the accession number NZ_JBJLXL010000000, and consists of
            sequences JBJLXL010000001-JBJLXL010000169.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 92x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799335.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:28:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,122
            CDSs (total)                      :: 5,025
            Genes (coding)                    :: 4,800
            CDSs (with protein)               :: 4,800
            Genes (RNA)                       :: 97
            rRNAs                             :: 7, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 5, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 225
            CDSs (without protein)            :: 225
            Pseudo Genes (ambiguous residues) :: 0 of 225
            Pseudo Genes (frameshifted)       :: 68 of 225
            Pseudo Genes (incomplete)         :: 159 of 225
            Pseudo Genes (internal stop)      :: 35 of 225
            Pseudo Genes (multiple problems)  :: 34 of 225
            Pseudo Genes (short protein)      :: 1 of 225
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5079740
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="167 J10"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2018-03-20"
WGS         JBJLXL010000001-JBJLXL010000169
WGS_SCAFLD  NZ_JBJLXL010000001-NZ_JBJLXL010000169
//
LOCUS       NZ_JBGMOY010000000   4986781 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-F02-PYO-64, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMOY000000000
VERSION     NZ_JBGMOY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076777
            Assembly: GCF_045797165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4986781)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4986781)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMOY000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMOY000000000.  This version of the project
            (01) has the accession number NZ_JBGMOY010000000, and consists of
            sequences JBGMOY010000001-JBGMOY010000061.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 23-OCT-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 103x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797165.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:12:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,884
            CDSs (total)                      :: 4,790
            Genes (coding)                    :: 4,600
            CDSs (with protein)               :: 4,600
            Genes (RNA)                       :: 94
            rRNAs                             :: 5, 5, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 3, 5 (5S, 16S)
            tRNAs                             :: 78
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 190
            CDSs (without protein)            :: 190
            Pseudo Genes (ambiguous residues) :: 0 of 190
            Pseudo Genes (frameshifted)       :: 80 of 190
            Pseudo Genes (incomplete)         :: 129 of 190
            Pseudo Genes (internal stop)      :: 41 of 190
            Pseudo Genes (multiple problems)  :: 53 of 190
            Pseudo Genes (short protein)      :: 1 of 190
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4986781
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-F02-PYO-64"
                     /isolation_source="Uterus"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2020-02-23"
WGS         JBGMOY010000001-JBGMOY010000061
WGS_SCAFLD  NZ_JBGMOY010000001-NZ_JBGMOY010000061
//
LOCUS       NZ_JBGMPO010000000   5028963 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-C04-PYO-228, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMPO000000000
VERSION     NZ_JBGMPO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076761
            Assembly: GCF_045797485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5028963)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5028963)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMPO000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMPO000000000.  This version of the project
            (01) has the accession number NZ_JBGMPO010000000, and consists of
            sequences JBGMPO010000001-JBGMPO010000168.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 07-OCT-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 105x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797485.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:01:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,974
            CDSs (total)                      :: 4,873
            Genes (coding)                    :: 4,603
            CDSs (with protein)               :: 4,603
            Genes (RNA)                       :: 101
            rRNAs                             :: 6, 7, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 7, 3 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 270
            CDSs (without protein)            :: 270
            Pseudo Genes (ambiguous residues) :: 0 of 270
            Pseudo Genes (frameshifted)       :: 111 of 270
            Pseudo Genes (incomplete)         :: 196 of 270
            Pseudo Genes (internal stop)      :: 43 of 270
            Pseudo Genes (multiple problems)  :: 72 of 270
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5028963
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-C04-PYO-228"
                     /isolation_source="Uterus"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2021-05-18"
WGS         JBGMPO010000001-JBGMPO010000168
WGS_SCAFLD  NZ_JBGMPO010000001-NZ_JBGMPO010000168
//
LOCUS       NZ_JBGMQB010000000   5147668 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-A03-PYO-85, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMQB000000000
VERSION     NZ_JBGMQB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076748
            Assembly: GCF_045797805.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5147668)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5147668)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMQB000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMQB000000000.  This version of the project
            (01) has the accession number NZ_JBGMQB010000000, and consists of
            sequences JBGMQB010000001-JBGMQB010000189.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 24-SEP-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 97x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797805.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:16:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,124
            CDSs (total)                      :: 5,029
            Genes (coding)                    :: 4,748
            CDSs (with protein)               :: 4,748
            Genes (RNA)                       :: 95
            rRNAs                             :: 6, 5, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 5, 3 (5S, 16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 281
            CDSs (without protein)            :: 281
            Pseudo Genes (ambiguous residues) :: 0 of 281
            Pseudo Genes (frameshifted)       :: 106 of 281
            Pseudo Genes (incomplete)         :: 216 of 281
            Pseudo Genes (internal stop)      :: 46 of 281
            Pseudo Genes (multiple problems)  :: 79 of 281
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5147668
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-A03-PYO-85"
                     /isolation_source="Uterus"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2020-05-05"
WGS         JBGMQB010000001-JBGMQB010000189
WGS_SCAFLD  NZ_JBGMQB010000001-NZ_JBGMQB010000189
//
LOCUS       NZ_JBJLYJ010000000   4955274 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 245 D2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLYJ000000000
VERSION     NZ_JBJLYJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114961
            Assembly: GCF_045799045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4955274)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLYJ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLYJ000000000.  This version of the project
            (01) has the accession number NZ_JBJLYJ010000000, and consists of
            sequences JBJLYJ010000001-JBJLYJ010000139.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799045.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:30:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,971
            CDSs (total)                      :: 4,862
            Genes (coding)                    :: 4,583
            CDSs (with protein)               :: 4,583
            Genes (RNA)                       :: 109
            rRNAs                             :: 6, 4, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 4, 3, 7 (5S, 16S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 279
            CDSs (without protein)            :: 279
            Pseudo Genes (ambiguous residues) :: 0 of 279
            Pseudo Genes (frameshifted)       :: 86 of 279
            Pseudo Genes (incomplete)         :: 202 of 279
            Pseudo Genes (internal stop)      :: 42 of 279
            Pseudo Genes (multiple problems)  :: 43 of 279
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4955274
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="245 D2"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2020-01-17"
WGS         JBJLYJ010000001-JBJLYJ010000139
WGS_SCAFLD  NZ_JBJLYJ010000001-NZ_JBJLYJ010000139
//
LOCUS       NZ_JBJLYP010000000   4834685 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 250 B5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLYP000000000
VERSION     NZ_JBJLYP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114967
            Assembly: GCF_045799655.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4834685)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLYP000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLYP000000000.  This version of the project
            (01) has the accession number NZ_JBJLYP010000000, and consists of
            sequences JBJLYP010000001-JBJLYP010000143.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 105x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799655.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:35:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,842
            CDSs (total)                      :: 4,737
            Genes (coding)                    :: 4,463
            CDSs (with protein)               :: 4,463
            Genes (RNA)                       :: 105
            rRNAs                             :: 6, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 5, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 274
            CDSs (without protein)            :: 274
            Pseudo Genes (ambiguous residues) :: 0 of 274
            Pseudo Genes (frameshifted)       :: 69 of 274
            Pseudo Genes (incomplete)         :: 200 of 274
            Pseudo Genes (internal stop)      :: 43 of 274
            Pseudo Genes (multiple problems)  :: 36 of 274
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4834685
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="250 B5"
                     /isolation_source="Urines (Infection)"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2020-02-15"
WGS         JBJLYP010000001-JBJLYP010000143
WGS_SCAFLD  NZ_JBJLYP010000001-NZ_JBJLYP010000143
//
LOCUS       NZ_JARTYV010000000   4996056 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 511432-22, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JARTYV000000000
VERSION     NZ_JARTYV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34004176
            Assembly: GCF_045795725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4996056)
  AUTHORS   Irimaso,E., Keinprecht,H., Szostak,M.P., Cabal Rosel,A., Stessl,B.,
            Desvars-Larrive,A., Ntakirutimana,C., Masengesho,G., Fischer,O.W.,
            Wittek,T., Mueller,E., Fessler,A.T., Braun,S.F., Schwarz,S.,
            Monecke,S., Ehricht,R., Spergser,J., Ruppitsch,W. and Loncaric,I.
  TITLE     Presence of broad-spectrum cephalosporin-resistant Enterobacterales
            isolated from ruminants in Rwanda
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4996056)
  AUTHORS   Szostak,M.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-MAR-2023) Department of Pathobiology, Institute of
            Microbiology, Veterinary University Vienna, Veterinaerplatz 1,
            Vienna 1210, Austria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARTYV000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JARTYV000000000.  This version of the project
            (01) has the accession number NZ_JARTYV010000000, and consists of
            sequences JARTYV010000001-JARTYV010000228.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 32x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795725.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:01:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,870
            CDSs (total)                      :: 4,776
            Genes (coding)                    :: 4,628
            CDSs (with protein)               :: 4,628
            Genes (RNA)                       :: 94
            rRNAs                             :: 4, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 4, 2 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 148
            CDSs (without protein)            :: 148
            Pseudo Genes (ambiguous residues) :: 0 of 148
            Pseudo Genes (frameshifted)       :: 44 of 148
            Pseudo Genes (incomplete)         :: 102 of 148
            Pseudo Genes (internal stop)      :: 22 of 148
            Pseudo Genes (multiple problems)  :: 19 of 148
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4996056
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="511432-22"
                     /host="sheep"
                     /db_xref="taxon:562"
                     /geo_loc_name="Rwanda: Musanze"
                     /collection_date="2021"
                     /collected_by="Helga Keinprecht"
WGS         JARTYV010000001-JARTYV010000228
WGS_SCAFLD  NZ_JARTYV010000001-NZ_JARTYV010000228
//
LOCUS       NZ_JBJLYG010000000   5123262 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 239 J1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLYG000000000
VERSION     NZ_JBJLYG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114958
            Assembly: GCF_045799115.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5123262)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLYG000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLYG000000000.  This version of the project
            (01) has the accession number NZ_JBJLYG010000000, and consists of
            sequences JBJLYG010000001-JBJLYG010000165.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799115.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:31:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,069
            CDSs (total)                      :: 4,968
            Genes (coding)                    :: 4,759
            CDSs (with protein)               :: 4,759
            Genes (RNA)                       :: 101
            rRNAs                             :: 5, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 3, 1, 3 (5S, 16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 209
            CDSs (without protein)            :: 209
            Pseudo Genes (ambiguous residues) :: 0 of 209
            Pseudo Genes (frameshifted)       :: 54 of 209
            Pseudo Genes (incomplete)         :: 161 of 209
            Pseudo Genes (internal stop)      :: 31 of 209
            Pseudo Genes (multiple problems)  :: 34 of 209
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5123262
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="239 J1"
                     /isolation_source="Urines (Infection)"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2019-11-17"
WGS         JBJLYG010000001-JBJLYG010000165
WGS_SCAFLD  NZ_JBJLYG010000001-NZ_JBJLYG010000165
//
LOCUS       NZ_JARTZW010000000   5265075 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 511405-22, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JARTZW000000000
VERSION     NZ_JARTZW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34004149
            Assembly: GCF_045796265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5265075)
  AUTHORS   Irimaso,E., Keinprecht,H., Szostak,M.P., Cabal Rosel,A., Stessl,B.,
            Desvars-Larrive,A., Ntakirutimana,C., Masengesho,G., Fischer,O.W.,
            Wittek,T., Mueller,E., Fessler,A.T., Braun,S.F., Schwarz,S.,
            Monecke,S., Ehricht,R., Spergser,J., Ruppitsch,W. and Loncaric,I.
  TITLE     Presence of broad-spectrum cephalosporin-resistant Enterobacterales
            isolated from ruminants in Rwanda
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5265075)
  AUTHORS   Szostak,M.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-MAR-2023) Department of Pathobiology, Institute of
            Microbiology, Veterinary University Vienna, Veterinaerplatz 1,
            Vienna 1210, Austria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARTZW000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JARTZW000000000.  This version of the project
            (01) has the accession number NZ_JARTZW010000000, and consists of
            sequences JARTZW010000001-JARTZW010000419.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 57x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045796265.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:01:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,466
            CDSs (total)                      :: 5,368
            Genes (coding)                    :: 5,087
            CDSs (with protein)               :: 5,087
            Genes (RNA)                       :: 98
            rRNAs                             :: 3, 2, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 2, 5 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 281
            CDSs (without protein)            :: 281
            Pseudo Genes (ambiguous residues) :: 0 of 281
            Pseudo Genes (frameshifted)       :: 78 of 281
            Pseudo Genes (incomplete)         :: 201 of 281
            Pseudo Genes (internal stop)      :: 32 of 281
            Pseudo Genes (multiple problems)  :: 28 of 281
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5265075
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="511405-22"
                     /host="cattle"
                     /db_xref="taxon:562"
                     /geo_loc_name="Rwanda: Musanze"
                     /collection_date="2021"
                     /collected_by="Helga Keinprecht"
WGS         JARTZW010000001-JARTZW010000419
WGS_SCAFLD  NZ_JARTZW010000001-NZ_JARTZW010000419
//
LOCUS       NZ_JBIGYY010000000   5267923 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E496, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGYY000000000
VERSION     NZ_JBIGYY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235491
            Assembly: GCF_045583445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5267923)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGYY000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGYY000000000.  This version of the project
            (01) has the accession number NZ_JBIGYY010000000, and consists of
            sequences JBIGYY010000001-JBIGYY010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 478x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045583445.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:04:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,240
            CDSs (total)                      :: 5,122
            Genes (coding)                    :: 4,807
            CDSs (with protein)               :: 4,807
            Genes (RNA)                       :: 118
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 90
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 315
            CDSs (without protein)            :: 315
            Pseudo Genes (ambiguous residues) :: 0 of 315
            Pseudo Genes (frameshifted)       :: 175 of 315
            Pseudo Genes (incomplete)         :: 166 of 315
            Pseudo Genes (internal stop)      :: 36 of 315
            Pseudo Genes (multiple problems)  :: 58 of 315
            Pseudo Genes (short protein)      :: 1 of 315
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5267923
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E496"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGYY010000001-JBIGYY010000008
WGS_SCAFLD  NZ_JBIGYY010000001-NZ_JBIGYY010000008
//
LOCUS       NZ_JBJLYU010000000   4778966 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 255 I3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLYU000000000
VERSION     NZ_JBJLYU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114972
            Assembly: GCF_045799755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4778966)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLYU000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLYU000000000.  This version of the project
            (01) has the accession number NZ_JBJLYU010000000, and consists of
            sequences JBJLYU010000001-JBJLYU010000137.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 174x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799755.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:31:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,753
            CDSs (total)                      :: 4,654
            Genes (coding)                    :: 4,418
            CDSs (with protein)               :: 4,418
            Genes (RNA)                       :: 99
            rRNAs                             :: 5, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 3, 3, 4 (5S, 16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 236
            CDSs (without protein)            :: 236
            Pseudo Genes (ambiguous residues) :: 0 of 236
            Pseudo Genes (frameshifted)       :: 67 of 236
            Pseudo Genes (incomplete)         :: 181 of 236
            Pseudo Genes (internal stop)      :: 35 of 236
            Pseudo Genes (multiple problems)  :: 43 of 236
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4778966
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="255 I3"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2020-03-02"
WGS         JBJLYU010000001-JBJLYU010000137
WGS_SCAFLD  NZ_JBJLYU010000001-NZ_JBJLYU010000137
//
LOCUS       NZ_JBIGZQ010000000   5272429 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E461, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGZQ000000000
VERSION     NZ_JBIGZQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235460
            Assembly: GCF_045583795.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5272429)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGZQ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGZQ000000000.  This version of the project
            (01) has the accession number NZ_JBIGZQ010000000, and consists of
            sequences JBIGZQ010000001-JBIGZQ010000022.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 199x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045583795.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:53:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,244
            CDSs (total)                      :: 5,121
            Genes (coding)                    :: 4,763
            CDSs (with protein)               :: 4,763
            Genes (RNA)                       :: 123
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 93
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 358
            CDSs (without protein)            :: 358
            Pseudo Genes (ambiguous residues) :: 0 of 358
            Pseudo Genes (frameshifted)       :: 208 of 358
            Pseudo Genes (incomplete)         :: 167 of 358
            Pseudo Genes (internal stop)      :: 39 of 358
            Pseudo Genes (multiple problems)  :: 51 of 358
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5272429
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E461"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGZQ010000001-JBIGZQ010000022
WGS_SCAFLD  NZ_JBIGZQ010000001-NZ_JBIGZQ010000022
//
LOCUS       NZ_JBGMPB010000000   4855699 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-E05-PYO-293, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMPB000000000
VERSION     NZ_JBGMPB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076774
            Assembly: GCF_045797225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4855699)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4855699)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMPB000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMPB000000000.  This version of the project
            (01) has the accession number NZ_JBGMPB010000000, and consists of
            sequences JBGMPB010000001-JBGMPB010000080.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 20-OCT-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 105x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797225.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:08:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,793
            CDSs (total)                      :: 4,686
            Genes (coding)                    :: 4,495
            CDSs (with protein)               :: 4,495
            Genes (RNA)                       :: 107
            rRNAs                             :: 8, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 16S)
            partial rRNAs                     :: 4, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 191
            CDSs (without protein)            :: 191
            Pseudo Genes (ambiguous residues) :: 0 of 191
            Pseudo Genes (frameshifted)       :: 71 of 191
            Pseudo Genes (incomplete)         :: 116 of 191
            Pseudo Genes (internal stop)      :: 38 of 191
            Pseudo Genes (multiple problems)  :: 29 of 191
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4855699
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-E05-PYO-293"
                     /isolation_source="Uterus"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2022-06-30"
WGS         JBGMPB010000001-JBGMPB010000080
WGS_SCAFLD  NZ_JBGMPB010000001-NZ_JBGMPB010000080
//
LOCUS       NZ_JBGMPE010000000   4986081 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-E02-PYO-61, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMPE000000000
VERSION     NZ_JBGMPE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076771
            Assembly: GCF_045797345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4986081)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4986081)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMPE000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMPE000000000.  This version of the project
            (01) has the accession number NZ_JBGMPE010000000, and consists of
            sequences JBGMPE010000001-JBGMPE010000061.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 17-OCT-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 105x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797345.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:07:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,881
            CDSs (total)                      :: 4,789
            Genes (coding)                    :: 4,592
            CDSs (with protein)               :: 4,592
            Genes (RNA)                       :: 92
            rRNAs                             :: 5, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 3, 3 (5S, 16S)
            tRNAs                             :: 78
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 197
            CDSs (without protein)            :: 197
            Pseudo Genes (ambiguous residues) :: 0 of 197
            Pseudo Genes (frameshifted)       :: 80 of 197
            Pseudo Genes (incomplete)         :: 136 of 197
            Pseudo Genes (internal stop)      :: 41 of 197
            Pseudo Genes (multiple problems)  :: 53 of 197
            Pseudo Genes (short protein)      :: 1 of 197
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4986081
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-E02-PYO-61"
                     /isolation_source="urine"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2020-02-23"
WGS         JBGMPE010000001-JBGMPE010000061
WGS_SCAFLD  NZ_JBGMPE010000001-NZ_JBGMPE010000061
//
LOCUS       NZ_JBJLYW010000000   4937957 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 258 B5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLYW000000000
VERSION     NZ_JBJLYW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114974
            Assembly: GCF_045800045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4937957)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLYW000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLYW000000000.  This version of the project
            (01) has the accession number NZ_JBJLYW010000000, and consists of
            sequences JBJLYW010000001-JBJLYW010000056.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 135x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800045.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:34:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,778
            CDSs (total)                      :: 4,672
            Genes (coding)                    :: 4,570
            CDSs (with protein)               :: 4,570
            Genes (RNA)                       :: 106
            rRNAs                             :: 6, 3, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 3, 6 (5S, 16S, 23S)
            tRNAs                             :: 80
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 102
            CDSs (without protein)            :: 102
            Pseudo Genes (ambiguous residues) :: 0 of 102
            Pseudo Genes (frameshifted)       :: 28 of 102
            Pseudo Genes (incomplete)         :: 76 of 102
            Pseudo Genes (internal stop)      :: 14 of 102
            Pseudo Genes (multiple problems)  :: 13 of 102
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4937957
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="258 B5"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2020-06-09"
WGS         JBJLYW010000001-JBJLYW010000056
WGS_SCAFLD  NZ_JBJLYW010000001-NZ_JBJLYW010000056
//
LOCUS       NZ_JBIHBM010000000   5430775 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E386, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHBM000000000
VERSION     NZ_JBIHBM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235394
            Assembly: GCF_045585275.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5430775)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHBM000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHBM000000000.  This version of the project
            (01) has the accession number NZ_JBIHBM010000000, and consists of
            sequences JBIHBM010000001-JBIHBM010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 225x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045585275.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:02:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,437
            CDSs (total)                      :: 5,319
            Genes (coding)                    :: 4,939
            CDSs (with protein)               :: 4,939
            Genes (RNA)                       :: 118
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 380
            CDSs (without protein)            :: 380
            Pseudo Genes (ambiguous residues) :: 0 of 380
            Pseudo Genes (frameshifted)       :: 196 of 380
            Pseudo Genes (incomplete)         :: 200 of 380
            Pseudo Genes (internal stop)      :: 56 of 380
            Pseudo Genes (multiple problems)  :: 66 of 380
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5430775
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E386"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHBM010000001-JBIHBM010000009
WGS_SCAFLD  NZ_JBIHBM010000001-NZ_JBIHBM010000009
//
LOCUS       NZ_JBGMPK010000000   4898472 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-D02-PYO-58, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMPK000000000
VERSION     NZ_JBGMPK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076765
            Assembly: GCF_045797445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4898472)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4898472)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMPK000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMPK000000000.  This version of the project
            (01) has the accession number NZ_JBGMPK010000000, and consists of
            sequences JBGMPK010000001-JBGMPK010000065.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 11-OCT-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 102x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797445.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:13:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,728
            CDSs (total)                      :: 4,632
            Genes (coding)                    :: 4,467
            CDSs (with protein)               :: 4,467
            Genes (RNA)                       :: 96
            rRNAs                             :: 6, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 4, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 165
            CDSs (without protein)            :: 165
            Pseudo Genes (ambiguous residues) :: 2 of 165
            Pseudo Genes (frameshifted)       :: 68 of 165
            Pseudo Genes (incomplete)         :: 115 of 165
            Pseudo Genes (internal stop)      :: 29 of 165
            Pseudo Genes (multiple problems)  :: 41 of 165
            Pseudo Genes (short protein)      :: 1 of 165
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4898472
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-D02-PYO-58"
                     /isolation_source="urine"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2020-02-17"
WGS         JBGMPK010000001-JBGMPK010000065
WGS_SCAFLD  NZ_JBGMPK010000001-NZ_JBGMPK010000065
//
LOCUS       NZ_JBJLYF010000000   5080123 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 239 D3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLYF000000000
VERSION     NZ_JBJLYF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114957
            Assembly: GCF_045800365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5080123)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLYF000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLYF000000000.  This version of the project
            (01) has the accession number NZ_JBJLYF010000000, and consists of
            sequences JBJLYF010000001-JBJLYF010000166.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800365.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:47:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,098
            CDSs (total)                      :: 4,995
            Genes (coding)                    :: 4,741
            CDSs (with protein)               :: 4,741
            Genes (RNA)                       :: 103
            rRNAs                             :: 5, 3, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 3, 2, 5 (5S, 16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 254
            CDSs (without protein)            :: 254
            Pseudo Genes (ambiguous residues) :: 0 of 254
            Pseudo Genes (frameshifted)       :: 73 of 254
            Pseudo Genes (incomplete)         :: 179 of 254
            Pseudo Genes (internal stop)      :: 46 of 254
            Pseudo Genes (multiple problems)  :: 40 of 254
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5080123
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="239 D3"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2019-11-16"
WGS         JBJLYF010000001-JBJLYF010000166
WGS_SCAFLD  NZ_JBJLYF010000001-NZ_JBJLYF010000166
//
LOCUS       NZ_JBGMPP010000000   4859173 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-C03-PYO-116, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMPP000000000
VERSION     NZ_JBGMPP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076760
            Assembly: GCF_045797545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4859173)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4859173)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMPP000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMPP000000000.  This version of the project
            (01) has the accession number NZ_JBGMPP010000000, and consists of
            sequences JBGMPP010000001-JBGMPP010000066.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 06-OCT-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 106x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797545.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:14:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,734
            CDSs (total)                      :: 4,635
            Genes (coding)                    :: 4,518
            CDSs (with protein)               :: 4,518
            Genes (RNA)                       :: 99
            rRNAs                             :: 8, 4, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 6, 4 (5S, 16S)
            tRNAs                             :: 80
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 117
            CDSs (without protein)            :: 117
            Pseudo Genes (ambiguous residues) :: 0 of 117
            Pseudo Genes (frameshifted)       :: 40 of 117
            Pseudo Genes (incomplete)         :: 83 of 117
            Pseudo Genes (internal stop)      :: 17 of 117
            Pseudo Genes (multiple problems)  :: 22 of 117
            Pseudo Genes (short protein)      :: 2 of 117
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4859173
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-C03-PYO-116"
                     /isolation_source="urine"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2020-09-13"
WGS         JBGMPP010000001-JBGMPP010000066
WGS_SCAFLD  NZ_JBGMPP010000001-NZ_JBGMPP010000066
//
LOCUS       NZ_JBIHDL010000000   5228324 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1001, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHDL000000000
VERSION     NZ_JBIHDL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235326
            Assembly: GCF_045607395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5228324)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHDL000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHDL000000000.  This version of the project
            (01) has the accession number NZ_JBIHDL010000000, and consists of
            sequences JBIHDL010000001-JBIHDL010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 355x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045607395.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:10:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,118
            CDSs (total)                      :: 4,998
            Genes (coding)                    :: 4,792
            CDSs (with protein)               :: 4,792
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 206
            CDSs (without protein)            :: 206
            Pseudo Genes (ambiguous residues) :: 0 of 206
            Pseudo Genes (frameshifted)       :: 108 of 206
            Pseudo Genes (incomplete)         :: 116 of 206
            Pseudo Genes (internal stop)      :: 26 of 206
            Pseudo Genes (multiple problems)  :: 40 of 206
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5228324
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1001"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHDL010000001-JBIHDL010000006
WGS_SCAFLD  NZ_JBIHDL010000001-NZ_JBIHDL010000006
//
LOCUS       NZ_JBJLWM010000000   4860863 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 104 G7, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLWM000000000
VERSION     NZ_JBJLWM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114907
            Assembly: GCF_045800965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4860863)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLWM000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLWM000000000.  This version of the project
            (01) has the accession number NZ_JBJLWM010000000, and consists of
            sequences JBJLWM010000001-JBJLWM010000112.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800965.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:42:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,789
            CDSs (total)                      :: 4,689
            Genes (coding)                    :: 4,448
            CDSs (with protein)               :: 4,448
            Genes (RNA)                       :: 100
            rRNAs                             :: 6, 3, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 4, 2, 5 (5S, 16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 241
            CDSs (without protein)            :: 241
            Pseudo Genes (ambiguous residues) :: 0 of 241
            Pseudo Genes (frameshifted)       :: 79 of 241
            Pseudo Genes (incomplete)         :: 161 of 241
            Pseudo Genes (internal stop)      :: 43 of 241
            Pseudo Genes (multiple problems)  :: 35 of 241
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4860863
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="104 G7"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2016-03-01"
WGS         JBJLWM010000001-JBJLWM010000112
WGS_SCAFLD  NZ_JBJLWM010000001-NZ_JBJLWM010000112
//
LOCUS       NZ_JBGMPV010000000   5154171 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-B03-PYO-87, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMPV000000000
VERSION     NZ_JBGMPV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076754
            Assembly: GCF_045797665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5154171)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5154171)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMPV000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMPV000000000.  This version of the project
            (01) has the accession number NZ_JBGMPV010000000, and consists of
            sequences JBGMPV010000001-JBGMPV010000196.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-SEP-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 99x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797665.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:17:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,140
            CDSs (total)                      :: 5,032
            Genes (coding)                    :: 4,754
            CDSs (with protein)               :: 4,754
            Genes (RNA)                       :: 108
            rRNAs                             :: 6, 12, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 12, 5 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 278
            CDSs (without protein)            :: 278
            Pseudo Genes (ambiguous residues) :: 2 of 278
            Pseudo Genes (frameshifted)       :: 107 of 278
            Pseudo Genes (incomplete)         :: 214 of 278
            Pseudo Genes (internal stop)      :: 45 of 278
            Pseudo Genes (multiple problems)  :: 81 of 278
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5154171
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-B03-PYO-87"
                     /isolation_source="urine"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2020-05-15"
WGS         JBGMPV010000001-JBGMPV010000196
WGS_SCAFLD  NZ_JBGMPV010000001-NZ_JBGMPV010000196
//
LOCUS       NZ_JBIHFB010000000   4849002 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E931, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHFB000000000
VERSION     NZ_JBIHFB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235268
            Assembly: GCF_045608265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4849002)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHFB000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHFB000000000.  This version of the project
            (01) has the accession number NZ_JBIHFB010000000, and consists of
            sequences JBIHFB010000001-JBIHFB010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 118x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045608265.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:59:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,823
            CDSs (total)                      :: 4,706
            Genes (coding)                    :: 4,399
            CDSs (with protein)               :: 4,399
            Genes (RNA)                       :: 117
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 84
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 307
            CDSs (without protein)            :: 307
            Pseudo Genes (ambiguous residues) :: 0 of 307
            Pseudo Genes (frameshifted)       :: 160 of 307
            Pseudo Genes (incomplete)         :: 154 of 307
            Pseudo Genes (internal stop)      :: 34 of 307
            Pseudo Genes (multiple problems)  :: 37 of 307
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4849002
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E931"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHFB010000001-JBIHFB010000009
WGS_SCAFLD  NZ_JBIHFB010000001-NZ_JBIHFB010000009
//
LOCUS       NZ_JBIGZA010000000   5098594 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E492, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGZA000000000
VERSION     NZ_JBIGZA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235487
            Assembly: GCF_045583515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5098594)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGZA000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGZA000000000.  This version of the project
            (01) has the accession number NZ_JBIGZA010000000, and consists of
            sequences JBIGZA010000001-JBIGZA010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 277x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045583515.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:49:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,059
            CDSs (total)                      :: 4,945
            Genes (coding)                    :: 4,578
            CDSs (with protein)               :: 4,578
            Genes (RNA)                       :: 114
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 367
            CDSs (without protein)            :: 367
            Pseudo Genes (ambiguous residues) :: 0 of 367
            Pseudo Genes (frameshifted)       :: 244 of 367
            Pseudo Genes (incomplete)         :: 160 of 367
            Pseudo Genes (internal stop)      :: 47 of 367
            Pseudo Genes (multiple problems)  :: 75 of 367
            Pseudo Genes (short protein)      :: 1 of 367
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5098594
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E492"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGZA010000001-JBIGZA010000009
WGS_SCAFLD  NZ_JBIGZA010000001-NZ_JBIGZA010000009
//
LOCUS       NZ_JBGMQD010000000   5208667 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-A01-PYO-7, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMQD000000000
VERSION     NZ_JBGMQD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076746
            Assembly: GCF_045797865.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5208667)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5208667)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMQD000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMQD000000000.  This version of the project
            (01) has the accession number NZ_JBGMQD010000000, and consists of
            sequences JBGMQD010000001-JBGMQD010000174.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 22-SEP-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 97x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797865.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:07:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,190
            CDSs (total)                      :: 5,081
            Genes (coding)                    :: 4,791
            CDSs (with protein)               :: 4,791
            Genes (RNA)                       :: 109
            rRNAs                             :: 6, 9, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 9, 9 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 290
            CDSs (without protein)            :: 290
            Pseudo Genes (ambiguous residues) :: 0 of 290
            Pseudo Genes (frameshifted)       :: 116 of 290
            Pseudo Genes (incomplete)         :: 220 of 290
            Pseudo Genes (internal stop)      :: 51 of 290
            Pseudo Genes (multiple problems)  :: 86 of 290
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5208667
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-A01-PYO-7"
                     /isolation_source="urine"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2019-08-21"
WGS         JBGMQD010000001-JBGMQD010000174
WGS_SCAFLD  NZ_JBGMQD010000001-NZ_JBGMQD010000174
//
LOCUS       NZ_JBIGZD010000000   5447451 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E486, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGZD000000000
VERSION     NZ_JBIGZD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235482
            Assembly: GCF_045583555.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5447451)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGZD000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGZD000000000.  This version of the project
            (01) has the accession number NZ_JBIGZD010000000, and consists of
            sequences JBIGZD010000001-JBIGZD010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 141x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045583555.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:45:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,479
            CDSs (total)                      :: 5,369
            Genes (coding)                    :: 4,994
            CDSs (with protein)               :: 4,994
            Genes (RNA)                       :: 110
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 375
            CDSs (without protein)            :: 375
            Pseudo Genes (ambiguous residues) :: 0 of 375
            Pseudo Genes (frameshifted)       :: 216 of 375
            Pseudo Genes (incomplete)         :: 203 of 375
            Pseudo Genes (internal stop)      :: 46 of 375
            Pseudo Genes (multiple problems)  :: 79 of 375
            Pseudo Genes (short protein)      :: 1 of 375
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5447451
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E486"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGZD010000001-JBIGZD010000005
WGS_SCAFLD  NZ_JBIGZD010000001-NZ_JBIGZD010000005
//
LOCUS       NZ_JBIHGF010000000   5447018 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E883, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHGF000000000
VERSION     NZ_JBIHGF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235225
            Assembly: GCF_045608845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5447018)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHGF000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHGF000000000.  This version of the project
            (01) has the accession number NZ_JBIHGF010000000, and consists of
            sequences JBIHGF010000001-JBIHGF010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 209x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045608845.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:04:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,462
            CDSs (total)                      :: 5,351
            Genes (coding)                    :: 4,974
            CDSs (with protein)               :: 4,974
            Genes (RNA)                       :: 111
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 377
            CDSs (without protein)            :: 377
            Pseudo Genes (ambiguous residues) :: 0 of 377
            Pseudo Genes (frameshifted)       :: 215 of 377
            Pseudo Genes (incomplete)         :: 198 of 377
            Pseudo Genes (internal stop)      :: 48 of 377
            Pseudo Genes (multiple problems)  :: 73 of 377
            Pseudo Genes (short protein)      :: 1 of 377
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5447018
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E883"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHGF010000001-JBIHGF010000004
WGS_SCAFLD  NZ_JBIHGF010000001-NZ_JBIHGF010000004
//
LOCUS       NZ_JARUAS010000000   5004121 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 510365-22, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JARUAS000000000
VERSION     NZ_JARUAS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34004127
            Assembly: GCF_045798885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5004121)
  AUTHORS   Irimaso,E., Keinprecht,H., Szostak,M.P., Cabal Rosel,A., Stessl,B.,
            Desvars-Larrive,A., Ntakirutimana,C., Masengesho,G., Fischer,O.W.,
            Wittek,T., Mueller,E., Fessler,A.T., Braun,S.F., Schwarz,S.,
            Monecke,S., Ehricht,R., Spergser,J., Ruppitsch,W. and Loncaric,I.
  TITLE     Presence of broad-spectrum cephalosporin-resistant Enterobacterales
            isolated from ruminants in Rwanda
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5004121)
  AUTHORS   Szostak,M.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-MAR-2023) Department of Pathobiology, Institute of
            Microbiology, Veterinary University Vienna, Veterinaerplatz 1,
            Vienna 1210, Austria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARUAS000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JARUAS000000000.  This version of the project
            (01) has the accession number NZ_JARUAS010000000, and consists of
            sequences JARUAS010000001-JARUAS010000302.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 63x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045798885.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:29:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,995
            CDSs (total)                      :: 4,903
            Genes (coding)                    :: 4,667
            CDSs (with protein)               :: 4,667
            Genes (RNA)                       :: 92
            rRNAs                             :: 3, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 4, 2 (5S, 16S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 236
            CDSs (without protein)            :: 236
            Pseudo Genes (ambiguous residues) :: 0 of 236
            Pseudo Genes (frameshifted)       :: 71 of 236
            Pseudo Genes (incomplete)         :: 177 of 236
            Pseudo Genes (internal stop)      :: 42 of 236
            Pseudo Genes (multiple problems)  :: 48 of 236
            Pseudo Genes (short protein)      :: 1 of 236
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5004121
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="510365-22"
                     /host="goat"
                     /db_xref="taxon:562"
                     /geo_loc_name="Rwanda: Musanze"
                     /collection_date="2021"
                     /collected_by="Helga Keinprecht"
WGS         JARUAS010000001-JARUAS010000302
WGS_SCAFLD  NZ_JARUAS010000001-NZ_JARUAS010000302
//
LOCUS       NZ_JBIHAN010000000   5241052 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E422, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHAN000000000
VERSION     NZ_JBIHAN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235424
            Assembly: GCF_045584755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5241052)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHAN000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHAN000000000.  This version of the project
            (01) has the accession number NZ_JBIHAN010000000, and consists of
            sequences JBIHAN010000001-JBIHAN010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 147x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045584755.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:56:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,197
            CDSs (total)                      :: 5,085
            Genes (coding)                    :: 4,783
            CDSs (with protein)               :: 4,783
            Genes (RNA)                       :: 112
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 302
            CDSs (without protein)            :: 302
            Pseudo Genes (ambiguous residues) :: 0 of 302
            Pseudo Genes (frameshifted)       :: 157 of 302
            Pseudo Genes (incomplete)         :: 175 of 302
            Pseudo Genes (internal stop)      :: 35 of 302
            Pseudo Genes (multiple problems)  :: 58 of 302
            Pseudo Genes (short protein)      :: 1 of 302
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5241052
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E422"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHAN010000001-JBIHAN010000005
WGS_SCAFLD  NZ_JBIHAN010000001-NZ_JBIHAN010000005
//
LOCUS       NZ_JBIHBB010000000   5292587 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E405, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHBB000000000
VERSION     NZ_JBIHBB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235409
            Assembly: GCF_045585055.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5292587)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHBB000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHBB000000000.  This version of the project
            (01) has the accession number NZ_JBIHBB010000000, and consists of
            sequences JBIHBB010000001-JBIHBB010000002.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 249x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045585055.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:50:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,255
            CDSs (total)                      :: 5,144
            Genes (coding)                    :: 4,845
            CDSs (with protein)               :: 4,845
            Genes (RNA)                       :: 111
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 299
            CDSs (without protein)            :: 299
            Pseudo Genes (ambiguous residues) :: 0 of 299
            Pseudo Genes (frameshifted)       :: 163 of 299
            Pseudo Genes (incomplete)         :: 160 of 299
            Pseudo Genes (internal stop)      :: 41 of 299
            Pseudo Genes (multiple problems)  :: 57 of 299
            Pseudo Genes (short protein)      :: 1 of 299
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5292587
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E405"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHBB010000001-JBIHBB010000002
WGS_SCAFLD  NZ_JBIHBB010000001-NZ_JBIHBB010000002
//
LOCUS       NZ_JBIHHJ010000000   5243433 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E843, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHHJ000000000
VERSION     NZ_JBIHHJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235190
            Assembly: GCF_045609425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5243433)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHHJ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHHJ000000000.  This version of the project
            (01) has the accession number NZ_JBIHHJ010000000, and consists of
            sequences JBIHHJ010000001-JBIHHJ010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 368x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045609425.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:06:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,174
            CDSs (total)                      :: 5,055
            Genes (coding)                    :: 4,721
            CDSs (with protein)               :: 4,721
            Genes (RNA)                       :: 119
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 334
            CDSs (without protein)            :: 334
            Pseudo Genes (ambiguous residues) :: 0 of 334
            Pseudo Genes (frameshifted)       :: 200 of 334
            Pseudo Genes (incomplete)         :: 142 of 334
            Pseudo Genes (internal stop)      :: 55 of 334
            Pseudo Genes (multiple problems)  :: 54 of 334
            Pseudo Genes (short protein)      :: 1 of 334
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5243433
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E843"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHHJ010000001-JBIHHJ010000006
WGS_SCAFLD  NZ_JBIHHJ010000001-NZ_JBIHHJ010000006
//
LOCUS       NZ_JBJLZL010000000   4983339 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 271 J1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLZL000000000
VERSION     NZ_JBJLZL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114989
            Assembly: GCF_045799435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4983339)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLZL000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLZL000000000.  This version of the project
            (01) has the accession number NZ_JBJLZL010000000, and consists of
            sequences JBJLZL010000001-JBJLZL010000171.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799435.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:27:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,920
            CDSs (total)                      :: 4,820
            Genes (coding)                    :: 4,621
            CDSs (with protein)               :: 4,621
            Genes (RNA)                       :: 100
            rRNAs                             :: 5, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 4, 1, 3 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 199
            CDSs (without protein)            :: 199
            Pseudo Genes (ambiguous residues) :: 0 of 199
            Pseudo Genes (frameshifted)       :: 63 of 199
            Pseudo Genes (incomplete)         :: 151 of 199
            Pseudo Genes (internal stop)      :: 29 of 199
            Pseudo Genes (multiple problems)  :: 33 of 199
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4983339
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="271 J1"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2020-11-08"
WGS         JBJLZL010000001-JBJLZL010000171
WGS_SCAFLD  NZ_JBJLZL010000001-NZ_JBJLZL010000171
//
LOCUS       NZ_JBIHIZ010000000   5047795 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E776, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHIZ000000000
VERSION     NZ_JBIHIZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235133
            Assembly: GCF_045610265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5047795)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHIZ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHIZ000000000.  This version of the project
            (01) has the accession number NZ_JBIHIZ010000000, and consists of
            sequences JBIHIZ010000001-JBIHIZ010000014.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 446x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045610265.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:04:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,963
            CDSs (total)                      :: 4,846
            Genes (coding)                    :: 4,529
            CDSs (with protein)               :: 4,529
            Genes (RNA)                       :: 117
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 317
            CDSs (without protein)            :: 317
            Pseudo Genes (ambiguous residues) :: 0 of 317
            Pseudo Genes (frameshifted)       :: 132 of 317
            Pseudo Genes (incomplete)         :: 161 of 317
            Pseudo Genes (internal stop)      :: 59 of 317
            Pseudo Genes (multiple problems)  :: 31 of 317
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5047795
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E776"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHIZ010000001-JBIHIZ010000014
WGS_SCAFLD  NZ_JBIHIZ010000001-NZ_JBIHIZ010000014
//
LOCUS       NZ_JBIHCC010000000   5204798 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E367, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHCC000000000
VERSION     NZ_JBIHCC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235376
            Assembly: GCF_045585575.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5204798)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHCC000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHCC000000000.  This version of the project
            (01) has the accession number NZ_JBIHCC010000000, and consists of
            sequences JBIHCC010000001-JBIHCC010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 516x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045585575.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:08:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,188
            CDSs (total)                      :: 5,072
            Genes (coding)                    :: 4,771
            CDSs (with protein)               :: 4,771
            Genes (RNA)                       :: 116
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 301
            CDSs (without protein)            :: 301
            Pseudo Genes (ambiguous residues) :: 0 of 301
            Pseudo Genes (frameshifted)       :: 135 of 301
            Pseudo Genes (incomplete)         :: 169 of 301
            Pseudo Genes (internal stop)      :: 33 of 301
            Pseudo Genes (multiple problems)  :: 33 of 301
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5204798
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E367"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHCC010000001-JBIHCC010000009
WGS_SCAFLD  NZ_JBIHCC010000001-NZ_JBIHCC010000009
//
LOCUS       NZ_JBIHLE010000000   5178336 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E683, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHLE000000000
VERSION     NZ_JBIHLE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235058
            Assembly: GCF_045611385.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5178336)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHLE000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHLE000000000.  This version of the project
            (01) has the accession number NZ_JBIHLE010000000, and consists of
            sequences JBIHLE010000001-JBIHLE010000017.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 272x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045611385.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:33:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,144
            CDSs (total)                      :: 5,028
            Genes (coding)                    :: 4,863
            CDSs (with protein)               :: 4,863
            Genes (RNA)                       :: 116
            rRNAs                             :: 6, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 7, 6 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 83
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 165
            CDSs (without protein)            :: 165
            Pseudo Genes (ambiguous residues) :: 0 of 165
            Pseudo Genes (frameshifted)       :: 83 of 165
            Pseudo Genes (incomplete)         :: 91 of 165
            Pseudo Genes (internal stop)      :: 22 of 165
            Pseudo Genes (multiple problems)  :: 27 of 165
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5178336
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E683"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHLE010000001-JBIHLE010000017
WGS_SCAFLD  NZ_JBIHLE010000001-NZ_JBIHLE010000017
//
LOCUS       NZ_JBIHCV010000000   4882619 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1026, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHCV000000000
VERSION     NZ_JBIHCV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235346
            Assembly: GCF_045607105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4882619)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHCV000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHCV000000000.  This version of the project
            (01) has the accession number NZ_JBIHCV010000000, and consists of
            sequences JBIHCV010000001-JBIHCV010000002.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 302x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045607105.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:54:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,654
            CDSs (total)                      :: 4,535
            Genes (coding)                    :: 4,389
            CDSs (with protein)               :: 4,389
            Genes (RNA)                       :: 119
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 146
            CDSs (without protein)            :: 146
            Pseudo Genes (ambiguous residues) :: 0 of 146
            Pseudo Genes (frameshifted)       :: 92 of 146
            Pseudo Genes (incomplete)         :: 60 of 146
            Pseudo Genes (internal stop)      :: 9 of 146
            Pseudo Genes (multiple problems)  :: 13 of 146
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4882619
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1026"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHCV010000001-JBIHCV010000002
WGS_SCAFLD  NZ_JBIHCV010000001-NZ_JBIHCV010000002
//
LOCUS       NZ_JBIHDT010000000   5412706 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E989, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHDT000000000
VERSION     NZ_JBIHDT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235316
            Assembly: GCF_045607565.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5412706)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHDT000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHDT000000000.  This version of the project
            (01) has the accession number NZ_JBIHDT010000000, and consists of
            sequences JBIHDT010000001-JBIHDT010000076.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 151x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045607565.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:11:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,480
            CDSs (total)                      :: 5,369
            Genes (coding)                    :: 5,009
            CDSs (with protein)               :: 5,009
            Genes (RNA)                       :: 111
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 360
            CDSs (without protein)            :: 360
            Pseudo Genes (ambiguous residues) :: 0 of 360
            Pseudo Genes (frameshifted)       :: 202 of 360
            Pseudo Genes (incomplete)         :: 195 of 360
            Pseudo Genes (internal stop)      :: 48 of 360
            Pseudo Genes (multiple problems)  :: 73 of 360
            Pseudo Genes (short protein)      :: 1 of 360
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5412706
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E989"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHDT010000001-JBIHDT010000076
WGS_SCAFLD  NZ_JBIHDT010000001-NZ_JBIHDT010000076
//
LOCUS       NZ_JBIWZT010000000   5413320 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1211, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIWZT000000000
VERSION     NZ_JBIWZT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247360
            Assembly: GCF_045618745.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5413320)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIWZT000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIWZT000000000.  This version of the project
            (01) has the accession number NZ_JBIWZT010000000, and consists of
            sequences JBIWZT010000001-JBIWZT010000012.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 183x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045618745.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:24:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,243
            CDSs (total)                      :: 5,122
            Genes (coding)                    :: 4,836
            CDSs (with protein)               :: 4,836
            Genes (RNA)                       :: 121
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 286
            CDSs (without protein)            :: 286
            Pseudo Genes (ambiguous residues) :: 0 of 286
            Pseudo Genes (frameshifted)       :: 139 of 286
            Pseudo Genes (incomplete)         :: 164 of 286
            Pseudo Genes (internal stop)      :: 50 of 286
            Pseudo Genes (multiple problems)  :: 60 of 286
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5413320
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1211"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIWZT010000001-JBIWZT010000012
WGS_SCAFLD  NZ_JBIWZT010000001-NZ_JBIWZT010000012
//
LOCUS       NZ_JBWCAS010000000   5226932 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain MTRBAS10, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWCAS000000000
VERSION     NZ_JBWCAS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56494004
            Assembly: GCF_056175485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5226932)
  AUTHORS   Zim,M.M.R., Hasan,M.A.E., Islam,M.S., Islam,M.M., Prome,A.A. and
            Rahman,M.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAR-2026) Department of Micobiology and Hygiene,
            Bangladesh Agricultural University, Department of Microbiology and
            Hygiene, Mymensingh 2202, Bangladesh
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWCAS000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBWCAS000000000.  This version of the project
            (01) has the accession number NZ_JBWCAS010000000, and consists of
            sequences JBWCAS010000001-JBWCAS010000165.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 40.84x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056175485.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:42:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,262
            CDSs (total)                      :: 5,151
            Genes (coding)                    :: 4,893
            CDSs (with protein)               :: 4,893
            Genes (RNA)                       :: 111
            rRNAs                             :: 7, 3, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 258
            CDSs (without protein)            :: 258
            Pseudo Genes (ambiguous residues) :: 0 of 258
            Pseudo Genes (frameshifted)       :: 84 of 258
            Pseudo Genes (incomplete)         :: 185 of 258
            Pseudo Genes (internal stop)      :: 45 of 258
            Pseudo Genes (multiple problems)  :: 48 of 258
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5226932
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="MTRBAS10"
                     /isolation_source="Rectal swab of dairy cattle"
                     /db_xref="taxon:562"
                     /geo_loc_name="Bangladesh: Mymensingh sadar, Mymensingh"
                     /collection_date="2025-09-17"
                     /collected_by="MD Makahuder Rahman Zim"
WGS         JBWCAS010000001-JBWCAS010000165
WGS_SCAFLD  NZ_JBWCAS010000001-NZ_JBWCAS010000165
//
LOCUS       NZ_JBIXBW010000000   5139356 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1144, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXBW000000000
VERSION     NZ_JBIXBW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247305
            Assembly: GCF_045619905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5139356)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXBW000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXBW000000000.  This version of the project
            (01) has the accession number NZ_JBIXBW010000000, and consists of
            sequences JBIXBW010000001-JBIXBW010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 162x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045619905.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:20:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,097
            CDSs (total)                      :: 4,971
            Genes (coding)                    :: 4,627
            CDSs (with protein)               :: 4,627
            Genes (RNA)                       :: 126
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 93
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 344
            CDSs (without protein)            :: 344
            Pseudo Genes (ambiguous residues) :: 0 of 344
            Pseudo Genes (frameshifted)       :: 162 of 344
            Pseudo Genes (incomplete)         :: 178 of 344
            Pseudo Genes (internal stop)      :: 54 of 344
            Pseudo Genes (multiple problems)  :: 45 of 344
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5139356
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1144"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXBW010000001-JBIXBW010000009
WGS_SCAFLD  NZ_JBIXBW010000001-NZ_JBIXBW010000009
//
LOCUS       NZ_JBJLYN010000000   5277156 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 248 B9, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLYN000000000
VERSION     NZ_JBJLYN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114965
            Assembly: GCF_045799785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5277156)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLYN000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLYN000000000.  This version of the project
            (01) has the accession number NZ_JBJLYN010000000, and consists of
            sequences JBJLYN010000001-JBJLYN010000143.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 78x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799785.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:43:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,232
            CDSs (total)                      :: 5,132
            Genes (coding)                    :: 4,918
            CDSs (with protein)               :: 4,918
            Genes (RNA)                       :: 100
            rRNAs                             :: 5, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 3, 1, 2 (5S, 16S, 23S)
            tRNAs                             :: 80
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 214
            CDSs (without protein)            :: 214
            Pseudo Genes (ambiguous residues) :: 0 of 214
            Pseudo Genes (frameshifted)       :: 58 of 214
            Pseudo Genes (incomplete)         :: 161 of 214
            Pseudo Genes (internal stop)      :: 33 of 214
            Pseudo Genes (multiple problems)  :: 34 of 214
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5277156
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="248 B9"
                     /isolation_source="Urines (Infection)"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2020-01-29"
WGS         JBJLYN010000001-JBJLYN010000143
WGS_SCAFLD  NZ_JBJLYN010000001-NZ_JBJLYN010000143
//
LOCUS       NZ_JBJLXE010000000   5081871 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 162 B3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLXE000000000
VERSION     NZ_JBJLXE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114926
            Assembly: GCF_045799355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5081871)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLXE000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLXE000000000.  This version of the project
            (01) has the accession number NZ_JBJLXE010000000, and consists of
            sequences JBJLXE010000001-JBJLXE010000147.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 101x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799355.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:23:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,086
            CDSs (total)                      :: 4,994
            Genes (coding)                    :: 4,781
            CDSs (with protein)               :: 4,781
            Genes (RNA)                       :: 92
            rRNAs                             :: 7, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 5, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 213
            CDSs (without protein)            :: 213
            Pseudo Genes (ambiguous residues) :: 0 of 213
            Pseudo Genes (frameshifted)       :: 67 of 213
            Pseudo Genes (incomplete)         :: 149 of 213
            Pseudo Genes (internal stop)      :: 41 of 213
            Pseudo Genes (multiple problems)  :: 39 of 213
            Pseudo Genes (short protein)      :: 1 of 213
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5081871
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="162 B3"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2018-01-11"
WGS         JBJLXE010000001-JBJLXE010000147
WGS_SCAFLD  NZ_JBJLXE010000001-NZ_JBJLXE010000147
//
LOCUS       NZ_JBJLZN010000000   4889561 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 273 B3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLZN000000000
VERSION     NZ_JBJLZN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114991
            Assembly: GCF_045799585.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4889561)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLZN000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLZN000000000.  This version of the project
            (01) has the accession number NZ_JBJLZN010000000, and consists of
            sequences JBJLZN010000001-JBJLZN010000114.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799585.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:32:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,801
            CDSs (total)                      :: 4,701
            Genes (coding)                    :: 4,473
            CDSs (with protein)               :: 4,473
            Genes (RNA)                       :: 100
            rRNAs                             :: 6, 4, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 4, 3, 5 (5S, 16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 228
            CDSs (without protein)            :: 228
            Pseudo Genes (ambiguous residues) :: 0 of 228
            Pseudo Genes (frameshifted)       :: 71 of 228
            Pseudo Genes (incomplete)         :: 157 of 228
            Pseudo Genes (internal stop)      :: 38 of 228
            Pseudo Genes (multiple problems)  :: 33 of 228
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4889561
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="273 B3"
                     /isolation_source="Urines (Colonisation)"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2020-11-19"
WGS         JBJLZN010000001-JBJLZN010000114
WGS_SCAFLD  NZ_JBJLZN010000001-NZ_JBJLZN010000114
//
LOCUS       NZ_NOOQ01000000      4760334 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain MOD1-EC6925, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NOOQ00000000
VERSION     NZ_NOOQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04992291
            Assembly: GCF_002519705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4760334)
  AUTHORS   Gangiredla,J., Mammel,M.K., Barnaba,T.J., Tartera,C., Gebru,S.T.,
            Patel,I.R., Leonard,S.R., Kotewicz,M.L., Lampel,K.A., Elkins,C.A.
            and Lacher,D.W.
  TITLE     Species-Wide Collection of Escherichia coli Isolates for
            Examination of Genomic Diversity
  JOURNAL   Genome Announc 5 (50), e01321-17 (2017)
   PUBMED   29242221
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4760334)
  AUTHORS   Gangiredla,J., Lacher,D.W., Mammel,M.K., Barnaba,T., Tartera,C.,
            Gebru,S., Patel,I.R., Leonard,S.R., Lampel,K.A. and Elkins,C.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-JUL-2017) CFSAN-ORS-DM-MMSB, US Food and Drug
            Administration, 5100 Paint Branch Parkway, College Park, MD 20740,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NOOQ00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_NOOQ00000000.  This version of the project
            (01) has the accession number NZ_NOOQ01000000, and consists of
            sequences NOOQ01000001-NOOQ01000121.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 71.2x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002519705.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:27:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,767
            CDSs (total)                      :: 4,672
            Genes (coding)                    :: 4,483
            CDSs (with protein)               :: 4,483
            Genes (RNA)                       :: 95
            rRNAs                             :: 6, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 74
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 189
            CDSs (without protein)            :: 189
            Pseudo Genes (ambiguous residues) :: 0 of 189
            Pseudo Genes (frameshifted)       :: 63 of 189
            Pseudo Genes (incomplete)         :: 117 of 189
            Pseudo Genes (internal stop)      :: 35 of 189
            Pseudo Genes (multiple problems)  :: 22 of 189
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4760334
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="MOD1-EC6925"
                     /serotype="OX09:H8"
                     /isolation_source="intestine"
                     /host="Odocoileus virginianus"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA"
                     /collection_date="1975-01-01"
                     /collected_by="Pennsylvania State University| Escherichia
                     coli Reference Center"
WGS         NOOQ01000001-NOOQ01000121
WGS_SCAFLD  NZ_NOOQ01000001-NZ_NOOQ01000121
//
LOCUS       NZ_JARTZN010000000   5112032 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 511414-22, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JARTZN000000000
VERSION     NZ_JARTZN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34004158
            Assembly: GCF_045796005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5112032)
  AUTHORS   Irimaso,E., Keinprecht,H., Szostak,M.P., Cabal Rosel,A., Stessl,B.,
            Desvars-Larrive,A., Ntakirutimana,C., Masengesho,G., Fischer,O.W.,
            Wittek,T., Mueller,E., Fessler,A.T., Braun,S.F., Schwarz,S.,
            Monecke,S., Ehricht,R., Spergser,J., Ruppitsch,W. and Loncaric,I.
  TITLE     Presence of broad-spectrum cephalosporin-resistant Enterobacterales
            isolated from ruminants in Rwanda
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5112032)
  AUTHORS   Szostak,M.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-MAR-2023) Department of Pathobiology, Institute of
            Microbiology, Veterinary University Vienna, Veterinaerplatz 1,
            Vienna 1210, Austria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARTZN000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JARTZN000000000.  This version of the project
            (01) has the accession number NZ_JARTZN010000000, and consists of
            sequences JARTZN010000001-JARTZN010000489.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 33x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045796005.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:59:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,144
            CDSs (total)                      :: 5,050
            Genes (coding)                    :: 4,783
            CDSs (with protein)               :: 4,783
            Genes (RNA)                       :: 94
            rRNAs                             :: 4, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 83 of 267
            Pseudo Genes (incomplete)         :: 195 of 267
            Pseudo Genes (internal stop)      :: 32 of 267
            Pseudo Genes (multiple problems)  :: 38 of 267
            Pseudo Genes (short protein)      :: 1 of 267
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5112032
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="511414-22"
                     /host="cattle"
                     /db_xref="taxon:562"
                     /geo_loc_name="Rwanda: Musanze"
                     /collection_date="2021"
                     /collected_by="Helga Keinprecht"
WGS         JARTZN010000001-JARTZN010000489
WGS_SCAFLD  NZ_JARTZN010000001-NZ_JARTZN010000489
//
LOCUS       NZ_JBJMAA010000000   4729123 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain EC3009, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJMAA000000000
VERSION     NZ_JBJMAA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45098938
            Assembly: GCF_045800675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4729123)
  AUTHORS   Kariuki,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2024) Centre for Microbiology, Kenya Medical
            Reserach Institute, Mbagathi, Nairobi 00200, Kenya
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJMAA000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJMAA000000000.  This version of the project
            (01) has the accession number NZ_JBJMAA010000000, and consists of
            sequences JBJMAA010000001-JBJMAA010000187.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 143.1x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800675.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 14:03:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,765
            CDSs (total)                      :: 4,647
            Genes (coding)                    :: 4,331
            CDSs (with protein)               :: 4,331
            Genes (RNA)                       :: 118
            rRNAs                             :: 8, 8, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 6, 8, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 316
            CDSs (without protein)            :: 316
            Pseudo Genes (ambiguous residues) :: 0 of 316
            Pseudo Genes (frameshifted)       :: 84 of 316
            Pseudo Genes (incomplete)         :: 236 of 316
            Pseudo Genes (internal stop)      :: 46 of 316
            Pseudo Genes (multiple problems)  :: 44 of 316
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4729123
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="EC3009"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Kenya: Kisii"
                     /collection_date="2018-03-16"
                     /collected_by="KEMRI,UW"
WGS         JBJMAA010000001-JBJMAA010000187
WGS_SCAFLD  NZ_JBJMAA010000001-NZ_JBJMAA010000187
//
LOCUS       NZ_JAQRGM010000000   4949863 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 26.1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAQRGM000000000
VERSION     NZ_JAQRGM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN23704823
            Assembly: GCF_028597835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4949863)
  AUTHORS   Cormier,A.C., Chalmers,G., Zamudio,R., Mulvey,M.R., Mather,A.E. and
            Boerlin,P.
  TITLE     Diversity of blaCTX-M-1-carrying plasmids recovered from
            Escherichia coli isolated from Canadian domestic animals
  JOURNAL   PLoS One 17 (3), e0264439 (2022)
   PUBMED   35294479
  REMARK    Erratum:[PLoS One. 2024 Apr 9;19(4):e0302193. doi:
            10.1371/journal.pone.0302193. PMID: 38593168]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4949863)
  AUTHORS   Cormier,A.C., Chalmers,G., Zhang,P., Mulvey,M.R. and Boerlin,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-FEB-2023) Pathobiology, University of Guelph, 50
            Stone Road East, Guelph, Ontario N1G 2W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAQRGM000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JAQRGM000000000.  This version of the project
            (01) has the accession number NZ_JAQRGM010000000, and consists of
            sequences JAQRGM010000001-JAQRGM010000007.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 148x
            Sequencing Technology  :: Oxford nanopore; Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_028597835.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:52:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,871
            CDSs (total)                      :: 4,747
            Genes (coding)                    :: 4,448
            CDSs (with protein)               :: 4,448
            Genes (RNA)                       :: 124
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 16
            Pseudo Genes (total)              :: 299
            CDSs (without protein)            :: 299
            Pseudo Genes (ambiguous residues) :: 0 of 299
            Pseudo Genes (frameshifted)       :: 164 of 299
            Pseudo Genes (incomplete)         :: 141 of 299
            Pseudo Genes (internal stop)      :: 40 of 299
            Pseudo Genes (multiple problems)  :: 43 of 299
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4949863
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="26.1"
                     /isolation_source="feces"
                     /host="horse"
                     /db_xref="taxon:562"
                     /geo_loc_name="Canada"
                     /collection_date="2017"
WGS         JAQRGM010000001-JAQRGM010000007
WGS_SCAFLD  NZ_JAQRGM010000001-NZ_JAQRGM010000007
//
LOCUS       NZ_JBIGUG010000000   4794925 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E668, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGUG000000000
VERSION     NZ_JBIGUG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235643
            Assembly: GCF_045581035.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4794925)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGUG000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGUG000000000.  This version of the project
            (01) has the accession number NZ_JBIGUG010000000, and consists of
            sequences JBIGUG010000001-JBIGUG010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 301x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045581035.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:57:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,661
            CDSs (total)                      :: 4,539
            Genes (coding)                    :: 4,338
            CDSs (with protein)               :: 4,338
            Genes (RNA)                       :: 122
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 201
            CDSs (without protein)            :: 201
            Pseudo Genes (ambiguous residues) :: 0 of 201
            Pseudo Genes (frameshifted)       :: 92 of 201
            Pseudo Genes (incomplete)         :: 100 of 201
            Pseudo Genes (internal stop)      :: 31 of 201
            Pseudo Genes (multiple problems)  :: 22 of 201
            Pseudo Genes (short protein)      :: 1 of 201
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4794925
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E668"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGUG010000001-JBIGUG010000007
WGS_SCAFLD  NZ_JBIGUG010000001-NZ_JBIGUG010000007
//
LOCUS       NZ_JBJLWU010000000   4921488 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 127 G7, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLWU000000000
VERSION     NZ_JBJLWU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114915
            Assembly: GCF_045800845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4921488)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLWU000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLWU000000000.  This version of the project
            (01) has the accession number NZ_JBJLWU010000000, and consists of
            sequences JBJLWU010000001-JBJLWU010000164.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 96x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800845.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:52:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,934
            CDSs (total)                      :: 4,829
            Genes (coding)                    :: 4,592
            CDSs (with protein)               :: 4,592
            Genes (RNA)                       :: 105
            rRNAs                             :: 7, 5, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 7, 5, 3 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 237
            CDSs (without protein)            :: 237
            Pseudo Genes (ambiguous residues) :: 0 of 237
            Pseudo Genes (frameshifted)       :: 70 of 237
            Pseudo Genes (incomplete)         :: 168 of 237
            Pseudo Genes (internal stop)      :: 44 of 237
            Pseudo Genes (multiple problems)  :: 39 of 237
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4921488
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="127 G7"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2016-12-21"
WGS         JBJLWU010000001-JBJLWU010000164
WGS_SCAFLD  NZ_JBJLWU010000001-NZ_JBJLWU010000164
//
LOCUS       NZ_NOEW01000000      5206703 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain MOD1-EC5281, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NOEW00000000
VERSION     NZ_NOEW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06555259
            Assembly: GCF_002517325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5206703)
  AUTHORS   Gangiredla,J., Mammel,M.K., Barnaba,T.J., Tartera,C., Gebru,S.T.,
            Patel,I.R., Leonard,S.R., Kotewicz,M.L., Lampel,K.A., Elkins,C.A.
            and Lacher,D.W.
  TITLE     Species-Wide Collection of Escherichia coli Isolates for
            Examination of Genomic Diversity
  JOURNAL   Genome Announc 5 (50), e01321-17 (2017)
   PUBMED   29242221
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5206703)
  AUTHORS   Gangiredla,J., Lacher,D.W., Mammel,M.K., Barnaba,T., Tartera,C.,
            Gebru,S., Patel,I.R., Leonard,S.R., Lampel,K.A. and Elkins,C.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-JUL-2017) CFSAN-ORS-DM-MMSB, US Food and Drug
            Administration, 5100 Paint Branch Parkway, College Park, MD 20740,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NOEW00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_NOEW00000000.  This version of the project
            (01) has the accession number NZ_NOEW01000000, and consists of
            sequences NOEW01000001-NOEW01000268.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 57.0x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002517325.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:44:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,392
            CDSs (total)                      :: 5,297
            Genes (coding)                    :: 4,995
            CDSs (with protein)               :: 4,995
            Genes (RNA)                       :: 95
            rRNAs                             :: 8, 6, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 7, 5 (5S, 16S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 302
            CDSs (without protein)            :: 302
            Pseudo Genes (ambiguous residues) :: 0 of 302
            Pseudo Genes (frameshifted)       :: 79 of 302
            Pseudo Genes (incomplete)         :: 226 of 302
            Pseudo Genes (internal stop)      :: 44 of 302
            Pseudo Genes (multiple problems)  :: 39 of 302
            Pseudo Genes (short protein)      :: 1 of 302
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5206703
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="MOD1-EC5281"
                     /isolation_source="rectum"
                     /host="Macaca mulatta"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA"
                     /collection_date="2001-03-26"
                     /collected_by="Pennsylvania State University| Escherichia
                     coli Reference Center"
WGS         NOEW01000001-NOEW01000268
WGS_SCAFLD  NZ_NOEW01000001-NZ_NOEW01000268
//
LOCUS       NZ_JBJLZR010000000   4401168 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 305 D2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLZR000000000
VERSION     NZ_JBJLZR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114995
            Assembly: GCF_045799735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4401168)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLZR000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLZR000000000.  This version of the project
            (01) has the accession number NZ_JBJLZR010000000, and consists of
            sequences JBJLZR010000001-JBJLZR010000075.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799735.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:27:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,290
            CDSs (total)                      :: 4,191
            Genes (coding)                    :: 4,036
            CDSs (with protein)               :: 4,036
            Genes (RNA)                       :: 99
            rRNAs                             :: 6, 4, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 4, 3 (5S, 16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 155
            CDSs (without protein)            :: 155
            Pseudo Genes (ambiguous residues) :: 0 of 155
            Pseudo Genes (frameshifted)       :: 47 of 155
            Pseudo Genes (incomplete)         :: 103 of 155
            Pseudo Genes (internal stop)      :: 26 of 155
            Pseudo Genes (multiple problems)  :: 19 of 155
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4401168
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="305 D2"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2020-06-26"
WGS         JBJLZR010000001-JBJLZR010000075
WGS_SCAFLD  NZ_JBJLZR010000001-NZ_JBJLZR010000075
//
LOCUS       NZ_JAIHKV010000000   5068383 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 6351, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAIHKV000000000
VERSION     NZ_JAIHKV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN20150324
            Assembly: GCF_020668495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5068383)
  AUTHORS   Vogt,N.A., Hetman,B.M., Pearl,D.L., Vogt,A.A., Reid-Smith,R.J.,
            Parmley,E.J., Janecko,N., Bharat,A., Mulvey,M.R., Ricker,N.,
            Bondo,K.J., Allen,S.E. and Jardine,C.M.
  TITLE     Using whole-genome sequence data to examine the epidemiology of
            Salmonella, Escherichia coli and associated antimicrobial
            resistance in raccoons (Procyon lotor), swine manure pits, and soil
            samples on swine farms in southern Ontario, Canada
  JOURNAL   PLoS One 16 (11), e0260234 (2021)
   PUBMED   34793571
  REMARK    Erratum:[PLoS One. 2024 Jul 29;19(7):e0308217. doi:
            10.1371/journal.pone.0308217. PMID: 39074101]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5068383)
  AUTHORS   Vogt,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-JUL-2021) Population Medicine, University of Guelph,
            50 Stone Road East, Guelph N1G2W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIHKV000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JAIHKV000000000.  This version of the project
            (01) has the accession number NZ_JAIHKV010000000, and consists of
            sequences JAIHKV010000001-JAIHKV010000065.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. 1.0.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 54x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_020668495.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:46:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,034
            CDSs (total)                      :: 4,948
            Genes (coding)                    :: 4,768
            CDSs (with protein)               :: 4,768
            Genes (RNA)                       :: 86
            rRNAs                             :: 8, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 7, 2 (5S, 16S)
            tRNAs                             :: 68
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 180
            CDSs (without protein)            :: 180
            Pseudo Genes (ambiguous residues) :: 0 of 180
            Pseudo Genes (frameshifted)       :: 66 of 180
            Pseudo Genes (incomplete)         :: 126 of 180
            Pseudo Genes (internal stop)      :: 34 of 180
            Pseudo Genes (multiple problems)  :: 39 of 180
            Pseudo Genes (short protein)      :: 2 of 180
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5068383
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="6351"
                     /isolation_source="soil"
                     /db_xref="taxon:562"
                     /geo_loc_name="Canada: Guelph"
                     /collection_date="2013-09-16"
                     /collected_by="University of Guelph"
WGS         JAIHKV010000001-JAIHKV010000065
WGS_SCAFLD  NZ_JAIHKV010000001-NZ_JAIHKV010000065
//
LOCUS       NZ_JBJLXF010000000   5005892 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 162 B5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLXF000000000
VERSION     NZ_JBJLXF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114927
            Assembly: GCF_045800135.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5005892)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLXF000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLXF000000000.  This version of the project
            (01) has the accession number NZ_JBJLXF010000000, and consists of
            sequences JBJLXF010000001-JBJLXF010000126.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800135.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:37:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,014
            CDSs (total)                      :: 4,918
            Genes (coding)                    :: 4,703
            CDSs (with protein)               :: 4,703
            Genes (RNA)                       :: 96
            rRNAs                             :: 7, 4, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 6, 4, 5 (5S, 16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 215
            CDSs (without protein)            :: 215
            Pseudo Genes (ambiguous residues) :: 0 of 215
            Pseudo Genes (frameshifted)       :: 71 of 215
            Pseudo Genes (incomplete)         :: 149 of 215
            Pseudo Genes (internal stop)      :: 40 of 215
            Pseudo Genes (multiple problems)  :: 40 of 215
            Pseudo Genes (short protein)      :: 1 of 215
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5005892
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="162 B5"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2018-01-09"
WGS         JBJLXF010000001-JBJLXF010000126
WGS_SCAFLD  NZ_JBJLXF010000001-NZ_JBJLXF010000126
//
LOCUS       NZ_JAIHJG010000000   4874061 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain R1123, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAIHJG000000000
VERSION     NZ_JAIHJG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN20150283
            Assembly: GCF_020669405.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4874061)
  AUTHORS   Vogt,N.A., Hetman,B.M., Pearl,D.L., Vogt,A.A., Reid-Smith,R.J.,
            Parmley,E.J., Janecko,N., Bharat,A., Mulvey,M.R., Ricker,N.,
            Bondo,K.J., Allen,S.E. and Jardine,C.M.
  TITLE     Using whole-genome sequence data to examine the epidemiology of
            Salmonella, Escherichia coli and associated antimicrobial
            resistance in raccoons (Procyon lotor), swine manure pits, and soil
            samples on swine farms in southern Ontario, Canada
  JOURNAL   PLoS One 16 (11), e0260234 (2021)
   PUBMED   34793571
  REMARK    Erratum:[PLoS One. 2024 Jul 29;19(7):e0308217. doi:
            10.1371/journal.pone.0308217. PMID: 39074101]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4874061)
  AUTHORS   Vogt,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-JUL-2021) Population Medicine, University of Guelph,
            50 Stone Road East, Guelph N1G2W1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIHJG000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JAIHJG000000000.  This version of the project
            (01) has the accession number NZ_JAIHJG010000000, and consists of
            sequences JAIHJG010000001-JAIHJG010000104.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. 1.0.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 68x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_020669405.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:34:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,828
            CDSs (total)                      :: 4,730
            Genes (coding)                    :: 4,576
            CDSs (with protein)               :: 4,576
            Genes (RNA)                       :: 98
            rRNAs                             :: 9, 4, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 7, 3, 7 (5S, 16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 154
            CDSs (without protein)            :: 154
            Pseudo Genes (ambiguous residues) :: 0 of 154
            Pseudo Genes (frameshifted)       :: 58 of 154
            Pseudo Genes (incomplete)         :: 103 of 154
            Pseudo Genes (internal stop)      :: 29 of 154
            Pseudo Genes (multiple problems)  :: 33 of 154
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4874061
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="R1123"
                     /host="raccoon"
                     /db_xref="taxon:562"
                     /geo_loc_name="Canada: Guelph"
                     /collection_date="2012-07-18"
                     /collected_by="University of Guelph"
WGS         JAIHJG010000001-JAIHJG010000104
WGS_SCAFLD  NZ_JAIHJG010000001-NZ_JAIHJG010000104
//
LOCUS       NZ_JBGMOS010000000   5097446 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-G03-PYO-141, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMOS000000000
VERSION     NZ_JBGMOS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076783
            Assembly: GCF_045796855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5097446)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5097446)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMOS000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMOS000000000.  This version of the project
            (01) has the accession number NZ_JBGMOS010000000, and consists of
            sequences JBGMOS010000001-JBGMOS010000079.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 29-OCT-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 96x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045796855.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:53:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,081
            CDSs (total)                      :: 4,972
            Genes (coding)                    :: 4,755
            CDSs (with protein)               :: 4,755
            Genes (RNA)                       :: 109
            rRNAs                             :: 6, 11, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 11, 7 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 217
            CDSs (without protein)            :: 217
            Pseudo Genes (ambiguous residues) :: 0 of 217
            Pseudo Genes (frameshifted)       :: 94 of 217
            Pseudo Genes (incomplete)         :: 155 of 217
            Pseudo Genes (internal stop)      :: 42 of 217
            Pseudo Genes (multiple problems)  :: 68 of 217
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5097446
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-G03-PYO-141"
                     /isolation_source="urine"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2020-10-04"
WGS         JBGMOS010000001-JBGMOS010000079
WGS_SCAFLD  NZ_JBGMOS010000001-NZ_JBGMOS010000079
//
LOCUS       NZ_JBJLWX010000000   4915249 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 138 E9, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLWX000000000
VERSION     NZ_JBJLWX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114919
            Assembly: GCF_045800865.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4915249)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLWX000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLWX000000000.  This version of the project
            (01) has the accession number NZ_JBJLWX010000000, and consists of
            sequences JBJLWX010000001-JBJLWX010000178.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 197x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800865.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:57:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,946
            CDSs (total)                      :: 4,846
            Genes (coding)                    :: 4,578
            CDSs (with protein)               :: 4,578
            Genes (RNA)                       :: 100
            rRNAs                             :: 4, 2, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 2, 5 (5S, 16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 268
            CDSs (without protein)            :: 268
            Pseudo Genes (ambiguous residues) :: 0 of 268
            Pseudo Genes (frameshifted)       :: 82 of 268
            Pseudo Genes (incomplete)         :: 199 of 268
            Pseudo Genes (internal stop)      :: 48 of 268
            Pseudo Genes (multiple problems)  :: 52 of 268
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4915249
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="138 E9"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2017-04-15"
WGS         JBJLWX010000001-JBJLWX010000178
WGS_SCAFLD  NZ_JBJLWX010000001-NZ_JBJLWX010000178
//
LOCUS       NZ_JBBXMT010000000   5311184 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 514R, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBBXMT000000000
VERSION     NZ_JBBXMT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40925046
            Assembly: GCF_045909095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5311184)
  AUTHORS   Xu,J., Liu,J., Zhao,J., Tian,T., Wang,M., Yuan,G., Peng,Y.,
            Zhang,Y., Li,Z., Kan,B., Li,Z. and Lu,X.
  TITLE     Clonal and horizontal transmission of carbapenem-resistant
            Enterobacterales strains and genes via flies
  JOURNAL   Gut Pathog 16 (1), 70 (2024)
   PUBMED   39550588
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5311184)
  AUTHORS   Liu,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2024) Chinese Center for Disease Control and
            Prevention, 155, Beijing 102200, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBXMT000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBBXMT000000000.  This version of the project
            (01) has the accession number NZ_JBBXMT010000000, and consists of
            sequences JBBXMT010000001-JBBXMT010000113.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2018
            Assembly Method        :: Unicycler v. 1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina; Oxford Nanopore GridION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045909095.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:55:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,274
            CDSs (total)                      :: 5,157
            Genes (coding)                    :: 4,891
            CDSs (with protein)               :: 4,891
            Genes (RNA)                       :: 117
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 266
            CDSs (without protein)            :: 266
            Pseudo Genes (ambiguous residues) :: 0 of 266
            Pseudo Genes (frameshifted)       :: 83 of 266
            Pseudo Genes (incomplete)         :: 159 of 266
            Pseudo Genes (internal stop)      :: 51 of 266
            Pseudo Genes (multiple problems)  :: 26 of 266
            Pseudo Genes (short protein)      :: 1 of 266
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5311184
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="514R"
                     /isolation_source="isolate from fly samples"
                     /db_xref="taxon:562"
                     /geo_loc_name="China: Henan"
                     /collection_date="2018"
WGS         JBBXMT010000001-JBBXMT010000113
WGS_SCAFLD  NZ_JBBXMT010000001-NZ_JBBXMT010000113
//
LOCUS       NZ_JBBYIW010000000   5495962 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 524R2-, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBBYIW000000000
VERSION     NZ_JBBYIW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40940156
            Assembly: GCF_045909295.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5495962)
  AUTHORS   Xu,J., Liu,J., Zhao,J., Tian,T., Wang,M., Yuan,G., Peng,Y.,
            Zhang,Y., Li,Z., Kan,B., Li,Z. and Lu,X.
  TITLE     Clonal and horizontal transmission of carbapenem-resistant
            Enterobacterales strains and genes via flies
  JOURNAL   Gut Pathog 16 (1), 70 (2024)
   PUBMED   39550588
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5495962)
  AUTHORS   Liu,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-APR-2024) Chinese Center for Disease Control and
            Prevention, 155, Beijing 102200, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBYIW000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBBYIW000000000.  This version of the project
            (01) has the accession number NZ_JBBYIW010000000, and consists of
            sequences JBBYIW010000001-JBBYIW010000098.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2018
            Assembly Method        :: Unicycler v. 1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina; Oxford Nanopore GridION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045909295.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 14:03:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,483
            CDSs (total)                      :: 5,402
            Genes (coding)                    :: 5,168
            CDSs (with protein)               :: 5,168
            Genes (RNA)                       :: 81
            rRNAs                             :: 2, 1 (5S, 16S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 73
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 234
            CDSs (without protein)            :: 234
            Pseudo Genes (ambiguous residues) :: 0 of 234
            Pseudo Genes (frameshifted)       :: 80 of 234
            Pseudo Genes (incomplete)         :: 166 of 234
            Pseudo Genes (internal stop)      :: 36 of 234
            Pseudo Genes (multiple problems)  :: 44 of 234
            Pseudo Genes (short protein)      :: 1 of 234
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5495962
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="524R2-"
                     /host="fly"
                     /db_xref="taxon:562"
                     /geo_loc_name="China: Henan"
                     /collection_date="2018"
WGS         JBBYIW010000001-JBBYIW010000098
WGS_SCAFLD  NZ_JBBYIW010000001-NZ_JBBYIW010000098
//
LOCUS       NZ_JBJLYL010000000   4889080 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 248 B6, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLYL000000000
VERSION     NZ_JBJLYL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114963
            Assembly: GCF_045799075.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4889080)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLYL000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLYL000000000.  This version of the project
            (01) has the accession number NZ_JBJLYL010000000, and consists of
            sequences JBJLYL010000001-JBJLYL010000132.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 64x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799075.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:24:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,880
            CDSs (total)                      :: 4,774
            Genes (coding)                    :: 4,531
            CDSs (with protein)               :: 4,531
            Genes (RNA)                       :: 106
            rRNAs                             :: 6, 4, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 3, 4 (5S, 16S, 23S)
            tRNAs                             :: 80
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 243
            CDSs (without protein)            :: 243
            Pseudo Genes (ambiguous residues) :: 0 of 243
            Pseudo Genes (frameshifted)       :: 74 of 243
            Pseudo Genes (incomplete)         :: 174 of 243
            Pseudo Genes (internal stop)      :: 39 of 243
            Pseudo Genes (multiple problems)  :: 38 of 243
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4889080
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="248 B6"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2020-02-05"
WGS         JBJLYL010000001-JBJLYL010000132
WGS_SCAFLD  NZ_JBJLYL010000001-NZ_JBJLYL010000132
//
LOCUS       NZ_JBJLZJ010000000   4766571 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 268 C6, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLZJ000000000
VERSION     NZ_JBJLZJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114987
            Assembly: GCF_045799215.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4766571)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLZJ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLZJ000000000.  This version of the project
            (01) has the accession number NZ_JBJLZJ010000000, and consists of
            sequences JBJLZJ010000001-JBJLZJ010000121.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799215.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:32:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,720
            CDSs (total)                      :: 4,618
            Genes (coding)                    :: 4,391
            CDSs (with protein)               :: 4,391
            Genes (RNA)                       :: 102
            rRNAs                             :: 7, 4, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 5, 4, 3 (5S, 16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 227
            CDSs (without protein)            :: 227
            Pseudo Genes (ambiguous residues) :: 0 of 227
            Pseudo Genes (frameshifted)       :: 68 of 227
            Pseudo Genes (incomplete)         :: 141 of 227
            Pseudo Genes (internal stop)      :: 56 of 227
            Pseudo Genes (multiple problems)  :: 33 of 227
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4766571
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="268 C6"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2018-11-23"
WGS         JBJLZJ010000001-JBJLZJ010000121
WGS_SCAFLD  NZ_JBJLZJ010000001-NZ_JBJLZJ010000121
//
LOCUS       NZ_JBGMOZ010000000   4955549 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-F01-PYO-17, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMOZ000000000
VERSION     NZ_JBGMOZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076776
            Assembly: GCF_045797245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4955549)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4955549)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMOZ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMOZ000000000.  This version of the project
            (01) has the accession number NZ_JBGMOZ010000000, and consists of
            sequences JBGMOZ010000001-JBGMOZ010000087.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 22-OCT-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 106x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797245.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:15:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,762
            CDSs (total)                      :: 4,669
            Genes (coding)                    :: 4,467
            CDSs (with protein)               :: 4,467
            Genes (RNA)                       :: 93
            rRNAs                             :: 5, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 4, 3, 2 (5S, 16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 202
            CDSs (without protein)            :: 202
            Pseudo Genes (ambiguous residues) :: 0 of 202
            Pseudo Genes (frameshifted)       :: 78 of 202
            Pseudo Genes (incomplete)         :: 148 of 202
            Pseudo Genes (internal stop)      :: 33 of 202
            Pseudo Genes (multiple problems)  :: 50 of 202
            Pseudo Genes (short protein)      :: 1 of 202
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4955549
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-F01-PYO-17"
                     /isolation_source="urine"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2019-09-18"
WGS         JBGMOZ010000001-JBGMOZ010000087
WGS_SCAFLD  NZ_JBGMOZ010000001-NZ_JBGMOZ010000087
//
LOCUS       NZ_JBJLZC010000000   4951204 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 268 B8, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLZC000000000
VERSION     NZ_JBJLZC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114980
            Assembly: GCF_045799375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4951204)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLZC000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLZC000000000.  This version of the project
            (01) has the accession number NZ_JBJLZC010000000, and consists of
            sequences JBJLZC010000001-JBJLZC010000134.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799375.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:15:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,921
            CDSs (total)                      :: 4,816
            Genes (coding)                    :: 4,559
            CDSs (with protein)               :: 4,559
            Genes (RNA)                       :: 105
            rRNAs                             :: 5, 4, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 3, 4, 6 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 257
            CDSs (without protein)            :: 257
            Pseudo Genes (ambiguous residues) :: 0 of 257
            Pseudo Genes (frameshifted)       :: 76 of 257
            Pseudo Genes (incomplete)         :: 174 of 257
            Pseudo Genes (internal stop)      :: 49 of 257
            Pseudo Genes (multiple problems)  :: 37 of 257
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4951204
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="268 B8"
                     /isolation_source="Urines (Infection)"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2018-09-25"
WGS         JBJLZC010000001-JBJLZC010000134
WGS_SCAFLD  NZ_JBJLZC010000001-NZ_JBJLZC010000134
//
LOCUS       NZ_JBJLZA010000000   5274521 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 268 B6, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLZA000000000
VERSION     NZ_JBJLZA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114978
            Assembly: GCF_045799405.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5274521)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLZA000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLZA000000000.  This version of the project
            (01) has the accession number NZ_JBJLZA010000000, and consists of
            sequences JBJLZA010000001-JBJLZA010000143.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799405.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:32:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,236
            CDSs (total)                      :: 5,131
            Genes (coding)                    :: 4,893
            CDSs (with protein)               :: 4,893
            Genes (RNA)                       :: 105
            rRNAs                             :: 6, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 238
            CDSs (without protein)            :: 238
            Pseudo Genes (ambiguous residues) :: 0 of 238
            Pseudo Genes (frameshifted)       :: 71 of 238
            Pseudo Genes (incomplete)         :: 178 of 238
            Pseudo Genes (internal stop)      :: 41 of 238
            Pseudo Genes (multiple problems)  :: 45 of 238
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5274521
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="268 B6"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2018-10-17"
WGS         JBJLZA010000001-JBJLZA010000143
WGS_SCAFLD  NZ_JBJLZA010000001-NZ_JBJLZA010000143
//
LOCUS       NZ_JBJLXR010000000   5003294 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 177 J4, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLXR000000000
VERSION     NZ_JBJLXR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114941
            Assembly: GCF_045799555.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5003294)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLXR000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLXR000000000.  This version of the project
            (01) has the accession number NZ_JBJLXR010000000, and consists of
            sequences JBJLXR010000001-JBJLXR010000119.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799555.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:22:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,972
            CDSs (total)                      :: 4,880
            Genes (coding)                    :: 4,671
            CDSs (with protein)               :: 4,671
            Genes (RNA)                       :: 92
            rRNAs                             :: 5, 4, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 4, 4, 5 (5S, 16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 209
            CDSs (without protein)            :: 209
            Pseudo Genes (ambiguous residues) :: 0 of 209
            Pseudo Genes (frameshifted)       :: 70 of 209
            Pseudo Genes (incomplete)         :: 142 of 209
            Pseudo Genes (internal stop)      :: 39 of 209
            Pseudo Genes (multiple problems)  :: 37 of 209
            Pseudo Genes (short protein)      :: 1 of 209
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5003294
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="177 J4"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2018-07-02"
WGS         JBJLXR010000001-JBJLXR010000119
WGS_SCAFLD  NZ_JBJLXR010000001-NZ_JBJLXR010000119
//
LOCUS       NZ_JBGMPU010000000   5068703 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-B04-PYO-223, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMPU000000000
VERSION     NZ_JBGMPU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076755
            Assembly: GCF_045797645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5068703)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5068703)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMPU000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMPU000000000.  This version of the project
            (01) has the accession number NZ_JBGMPU010000000, and consists of
            sequences JBGMPU010000001-JBGMPU010000101.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 01-OCT-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 98x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797645.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:15:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,990
            CDSs (total)                      :: 4,897
            Genes (coding)                    :: 4,656
            CDSs (with protein)               :: 4,656
            Genes (RNA)                       :: 93
            rRNAs                             :: 5, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 241
            CDSs (without protein)            :: 241
            Pseudo Genes (ambiguous residues) :: 1 of 241
            Pseudo Genes (frameshifted)       :: 94 of 241
            Pseudo Genes (incomplete)         :: 169 of 241
            Pseudo Genes (internal stop)      :: 42 of 241
            Pseudo Genes (multiple problems)  :: 56 of 241
            Pseudo Genes (short protein)      :: 1 of 241
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5068703
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-B04-PYO-223"
                     /isolation_source="urine"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2021-05-10"
WGS         JBGMPU010000001-JBGMPU010000101
WGS_SCAFLD  NZ_JBGMPU010000001-NZ_JBGMPU010000101
//
LOCUS       NZ_JBJLXY010000000   4996001 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 220 D3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLXY000000000
VERSION     NZ_JBJLXY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114949
            Assembly: GCF_045799815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4996001)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLXY000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLXY000000000.  This version of the project
            (01) has the accession number NZ_JBJLXY010000000, and consists of
            sequences JBJLXY010000001-JBJLXY010000215.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799815.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:36:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,073
            CDSs (total)                      :: 4,969
            Genes (coding)                    :: 4,676
            CDSs (with protein)               :: 4,676
            Genes (RNA)                       :: 104
            rRNAs                             :: 6, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 3, 3, 4 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 293
            CDSs (without protein)            :: 293
            Pseudo Genes (ambiguous residues) :: 0 of 293
            Pseudo Genes (frameshifted)       :: 79 of 293
            Pseudo Genes (incomplete)         :: 224 of 293
            Pseudo Genes (internal stop)      :: 51 of 293
            Pseudo Genes (multiple problems)  :: 51 of 293
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4996001
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="220 D3"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2019-06-20"
WGS         JBJLXY010000001-JBJLXY010000215
WGS_SCAFLD  NZ_JBJLXY010000001-NZ_JBJLXY010000215
//
LOCUS       NZ_JBJLZD010000000   5032777 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 268 B9, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLZD000000000
VERSION     NZ_JBJLZD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114981
            Assembly: GCF_045800215.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5032777)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLZD000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLZD000000000.  This version of the project
            (01) has the accession number NZ_JBJLZD010000000, and consists of
            sequences JBJLZD010000001-JBJLZD010000181.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800215.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:46:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,060
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,692
            CDSs (with protein)               :: 4,692
            Genes (RNA)                       :: 106
            rRNAs                             :: 6, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 4, 3, 4 (5S, 16S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 262
            CDSs (without protein)            :: 262
            Pseudo Genes (ambiguous residues) :: 0 of 262
            Pseudo Genes (frameshifted)       :: 81 of 262
            Pseudo Genes (incomplete)         :: 181 of 262
            Pseudo Genes (internal stop)      :: 41 of 262
            Pseudo Genes (multiple problems)  :: 35 of 262
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5032777
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="268 B9"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2017-07-19"
WGS         JBJLZD010000001-JBJLZD010000181
WGS_SCAFLD  NZ_JBJLZD010000001-NZ_JBJLZD010000181
//
LOCUS       NZ_JBJLZO010000000   4714175 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 275 D10, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLZO000000000
VERSION     NZ_JBJLZO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114992
            Assembly: GCF_045800535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4714175)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLZO000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLZO000000000.  This version of the project
            (01) has the accession number NZ_JBJLZO010000000, and consists of
            sequences JBJLZO010000001-JBJLZO010000193.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 125x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800535.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:41:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,721
            CDSs (total)                      :: 4,622
            Genes (coding)                    :: 4,367
            CDSs (with protein)               :: 4,367
            Genes (RNA)                       :: 99
            rRNAs                             :: 4, 3, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2, 2, 5 (5S, 16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 255
            CDSs (without protein)            :: 255
            Pseudo Genes (ambiguous residues) :: 0 of 255
            Pseudo Genes (frameshifted)       :: 73 of 255
            Pseudo Genes (incomplete)         :: 184 of 255
            Pseudo Genes (internal stop)      :: 45 of 255
            Pseudo Genes (multiple problems)  :: 43 of 255
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4714175
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="275 D10"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2020-12-16"
WGS         JBJLZO010000001-JBJLZO010000193
WGS_SCAFLD  NZ_JBJLZO010000001-NZ_JBJLZO010000193
//
LOCUS       NZ_JBJLXV010000000   4727787 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 216 J1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLXV000000000
VERSION     NZ_JBJLXV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114946
            Assembly: GCF_045799855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4727787)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLXV000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLXV000000000.  This version of the project
            (01) has the accession number NZ_JBJLXV010000000, and consists of
            sequences JBJLXV010000001-JBJLXV010000163.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799855.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:30:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,708
            CDSs (total)                      :: 4,603
            Genes (coding)                    :: 4,366
            CDSs (with protein)               :: 4,366
            Genes (RNA)                       :: 105
            rRNAs                             :: 5, 4, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 3, 4, 5 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 237
            CDSs (without protein)            :: 237
            Pseudo Genes (ambiguous residues) :: 0 of 237
            Pseudo Genes (frameshifted)       :: 74 of 237
            Pseudo Genes (incomplete)         :: 167 of 237
            Pseudo Genes (internal stop)      :: 42 of 237
            Pseudo Genes (multiple problems)  :: 42 of 237
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4727787
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="216 J1"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2019-05-24"
WGS         JBJLXV010000001-JBJLXV010000163
WGS_SCAFLD  NZ_JBJLXV010000001-NZ_JBJLXV010000163
//
LOCUS       NZ_JBJLWP010000000   4726611 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 114 B6, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLWP000000000
VERSION     NZ_JBJLWP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114910
            Assembly: GCF_045800985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4726611)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLWP000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLWP000000000.  This version of the project
            (01) has the accession number NZ_JBJLWP010000000, and consists of
            sequences JBJLWP010000001-JBJLWP010000154.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 87x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800985.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:48:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,744
            CDSs (total)                      :: 4,650
            Genes (coding)                    :: 4,374
            CDSs (with protein)               :: 4,374
            Genes (RNA)                       :: 94
            rRNAs                             :: 5, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2, 1, 3 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 276
            CDSs (without protein)            :: 276
            Pseudo Genes (ambiguous residues) :: 0 of 276
            Pseudo Genes (frameshifted)       :: 64 of 276
            Pseudo Genes (incomplete)         :: 207 of 276
            Pseudo Genes (internal stop)      :: 42 of 276
            Pseudo Genes (multiple problems)  :: 33 of 276
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4726611
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="114 B6"
                     /isolation_source="Urines (Infection)"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2016-07-13"
WGS         JBJLWP010000001-JBJLWP010000154
WGS_SCAFLD  NZ_JBJLWP010000001-NZ_JBJLWP010000154
//
LOCUS       NZ_JBJLXT010000000   4865109 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 188 E5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLXT000000000
VERSION     NZ_JBJLXT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114943
            Assembly: GCF_045799955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4865109)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLXT000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLXT000000000.  This version of the project
            (01) has the accession number NZ_JBJLXT010000000, and consists of
            sequences JBJLXT010000001-JBJLXT010000159.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799955.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:47:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,847
            CDSs (total)                      :: 4,757
            Genes (coding)                    :: 4,492
            CDSs (with protein)               :: 4,492
            Genes (RNA)                       :: 90
            rRNAs                             :: 5, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 3, 1, 4 (5S, 16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 265
            CDSs (without protein)            :: 265
            Pseudo Genes (ambiguous residues) :: 0 of 265
            Pseudo Genes (frameshifted)       :: 72 of 265
            Pseudo Genes (incomplete)         :: 201 of 265
            Pseudo Genes (internal stop)      :: 44 of 265
            Pseudo Genes (multiple problems)  :: 46 of 265
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4865109
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="188 E5"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2018-09-22"
WGS         JBJLXT010000001-JBJLXT010000159
WGS_SCAFLD  NZ_JBJLXT010000001-NZ_JBJLXT010000159
//
LOCUS       NZ_NNTR01000000      4772263 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain MOD1-EC6659, whole genome shotgun
            sequencing project.
ACCESSION   NZ_NNTR00000000
VERSION     NZ_NNTR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN04992489
            Assembly: GCF_002484775.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4772263)
  AUTHORS   Gangiredla,J., Mammel,M.K., Barnaba,T.J., Tartera,C., Gebru,S.T.,
            Patel,I.R., Leonard,S.R., Kotewicz,M.L., Lampel,K.A., Elkins,C.A.
            and Lacher,D.W.
  TITLE     Species-Wide Collection of Escherichia coli Isolates for
            Examination of Genomic Diversity
  JOURNAL   Genome Announc 5 (50), e01321-17 (2017)
   PUBMED   29242221
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4772263)
  AUTHORS   Gangiredla,J., Lacher,D.W., Mammel,M.K., Barnaba,T., Tartera,C.,
            Gebru,S., Patel,I.R., Leonard,S.R., Lampel,K.A. and Elkins,C.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-JUL-2017) CFSAN-ORS-DM-MMSB, US Food and Drug
            Administration, 5100 Paint Branch Parkway, College Park, MD 20740,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NNTR00000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_NNTR00000000.  This version of the project
            (01) has the accession number NZ_NNTR01000000, and consists of
            sequences NNTR01000001-NNTR01000187.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 54.5x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_002484775.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:40:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,833
            CDSs (total)                      :: 4,737
            Genes (coding)                    :: 4,462
            CDSs (with protein)               :: 4,462
            Genes (RNA)                       :: 96
            rRNAs                             :: 9, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 9, 2 (5S, 16S)
            tRNAs                             :: 76
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 275
            CDSs (without protein)            :: 275
            Pseudo Genes (ambiguous residues) :: 0 of 275
            Pseudo Genes (frameshifted)       :: 80 of 275
            Pseudo Genes (incomplete)         :: 164 of 275
            Pseudo Genes (internal stop)      :: 51 of 275
            Pseudo Genes (multiple problems)  :: 19 of 275
            Pseudo Genes (short protein)      :: 1 of 275
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4772263
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="MOD1-EC6659"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA"
                     /collection_date="1991-02-28"
                     /collected_by="Pennsylvania State University| Escherichia
                     coli Reference Center"
WGS         NNTR01000001-NNTR01000187
WGS_SCAFLD  NZ_NNTR01000001-NZ_NNTR01000187
//
LOCUS       NZ_JBJLZT010000000   4828646 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 90 E5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLZT000000000
VERSION     NZ_JBJLZT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114997
            Assembly: GCF_045800175.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4828646)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLZT000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLZT000000000.  This version of the project
            (01) has the accession number NZ_JBJLZT010000000, and consists of
            sequences JBJLZT010000001-JBJLZT010000131.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800175.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:43:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,818
            CDSs (total)                      :: 4,720
            Genes (coding)                    :: 4,512
            CDSs (with protein)               :: 4,512
            Genes (RNA)                       :: 98
            rRNAs                             :: 5, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 3, 1, 4 (5S, 16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 208
            CDSs (without protein)            :: 208
            Pseudo Genes (ambiguous residues) :: 0 of 208
            Pseudo Genes (frameshifted)       :: 59 of 208
            Pseudo Genes (incomplete)         :: 145 of 208
            Pseudo Genes (internal stop)      :: 36 of 208
            Pseudo Genes (multiple problems)  :: 30 of 208
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4828646
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="90 E5"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2015-09-16"
WGS         JBJLZT010000001-JBJLZT010000131
WGS_SCAFLD  NZ_JBJLZT010000001-NZ_JBJLZT010000131
//
LOCUS       NZ_JBJLZS010000000   4919436 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 77 A10, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLZS000000000
VERSION     NZ_JBJLZS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114996
            Assembly: GCF_045800375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4919436)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLZS000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLZS000000000.  This version of the project
            (01) has the accession number NZ_JBJLZS010000000, and consists of
            sequences JBJLZS010000001-JBJLZS010000181.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800375.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:58:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,963
            CDSs (total)                      :: 4,865
            Genes (coding)                    :: 4,592
            CDSs (with protein)               :: 4,592
            Genes (RNA)                       :: 98
            rRNAs                             :: 4, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2, 1, 4 (5S, 16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 273
            CDSs (without protein)            :: 273
            Pseudo Genes (ambiguous residues) :: 0 of 273
            Pseudo Genes (frameshifted)       :: 70 of 273
            Pseudo Genes (incomplete)         :: 205 of 273
            Pseudo Genes (internal stop)      :: 54 of 273
            Pseudo Genes (multiple problems)  :: 46 of 273
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4919436
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="77 A10"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2015-03-12"
WGS         JBJLZS010000001-JBJLZS010000181
WGS_SCAFLD  NZ_JBJLZS010000001-NZ_JBJLZS010000181
//
LOCUS       NZ_JBJLZI010000000   4871620 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 268 C5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLZI000000000
VERSION     NZ_JBJLZI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114986
            Assembly: GCF_045800515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4871620)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLZI000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLZI000000000.  This version of the project
            (01) has the accession number NZ_JBJLZI010000000, and consists of
            sequences JBJLZI010000001-JBJLZI010000132.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800515.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:42:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,801
            CDSs (total)                      :: 4,700
            Genes (coding)                    :: 4,473
            CDSs (with protein)               :: 4,473
            Genes (RNA)                       :: 101
            rRNAs                             :: 5, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 3, 3, 4 (5S, 16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 227
            CDSs (without protein)            :: 227
            Pseudo Genes (ambiguous residues) :: 0 of 227
            Pseudo Genes (frameshifted)       :: 74 of 227
            Pseudo Genes (incomplete)         :: 151 of 227
            Pseudo Genes (internal stop)      :: 46 of 227
            Pseudo Genes (multiple problems)  :: 40 of 227
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4871620
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="268 C5"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2019-01-18"
WGS         JBJLZI010000001-JBJLZI010000132
WGS_SCAFLD  NZ_JBJLZI010000001-NZ_JBJLZI010000132
//
LOCUS       NZ_JBJLWW010000000   5018815 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 137 H1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLWW000000000
VERSION     NZ_JBJLWW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114918
            Assembly: GCF_045800875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5018815)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLWW000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLWW000000000.  This version of the project
            (01) has the accession number NZ_JBJLWW010000000, and consists of
            sequences JBJLWW010000001-JBJLWW010000192.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 194x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800875.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 14:01:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,068
            CDSs (total)                      :: 4,961
            Genes (coding)                    :: 4,728
            CDSs (with protein)               :: 4,728
            Genes (RNA)                       :: 107
            rRNAs                             :: 7, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 5, 3, 4 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 233
            CDSs (without protein)            :: 233
            Pseudo Genes (ambiguous residues) :: 0 of 233
            Pseudo Genes (frameshifted)       :: 70 of 233
            Pseudo Genes (incomplete)         :: 169 of 233
            Pseudo Genes (internal stop)      :: 37 of 233
            Pseudo Genes (multiple problems)  :: 39 of 233
            Pseudo Genes (short protein)      :: 1 of 233
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5018815
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="137 H1"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2017-04-18"
WGS         JBJLWW010000001-JBJLWW010000192
WGS_SCAFLD  NZ_JBJLWW010000001-NZ_JBJLWW010000192
//
LOCUS       NZ_JBJLXC010000000   4701666 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 161 E6, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLXC000000000
VERSION     NZ_JBJLXC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114924
            Assembly: GCF_045801105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4701666)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLXC000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLXC000000000.  This version of the project
            (01) has the accession number NZ_JBJLXC010000000, and consists of
            sequences JBJLXC010000001-JBJLXC010000190.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 69x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045801105.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:55:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,646
            CDSs (total)                      :: 4,554
            Genes (coding)                    :: 4,398
            CDSs (with protein)               :: 4,398
            Genes (RNA)                       :: 92
            rRNAs                             :: 6, 4, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 3, 4, 6 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 156
            CDSs (without protein)            :: 156
            Pseudo Genes (ambiguous residues) :: 0 of 156
            Pseudo Genes (frameshifted)       :: 50 of 156
            Pseudo Genes (incomplete)         :: 110 of 156
            Pseudo Genes (internal stop)      :: 25 of 156
            Pseudo Genes (multiple problems)  :: 26 of 156
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4701666
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="161 E6"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2018-01-03"
WGS         JBJLXC010000001-JBJLXC010000190
WGS_SCAFLD  NZ_JBJLXC010000001-NZ_JBJLXC010000190
//
LOCUS       NZ_JARUAE010000000   5023450 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 511397-22, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JARUAE000000000
VERSION     NZ_JARUAE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34004141
            Assembly: GCF_045796545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5023450)
  AUTHORS   Irimaso,E., Keinprecht,H., Szostak,M.P., Cabal Rosel,A., Stessl,B.,
            Desvars-Larrive,A., Ntakirutimana,C., Masengesho,G., Fischer,O.W.,
            Wittek,T., Mueller,E., Fessler,A.T., Braun,S.F., Schwarz,S.,
            Monecke,S., Ehricht,R., Spergser,J., Ruppitsch,W. and Loncaric,I.
  TITLE     Presence of broad-spectrum cephalosporin-resistant Enterobacterales
            isolated from ruminants in Rwanda
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5023450)
  AUTHORS   Szostak,M.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-MAR-2023) Department of Pathobiology, Institute of
            Microbiology, Veterinary University Vienna, Veterinaerplatz 1,
            Vienna 1210, Austria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARUAE000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JARUAE000000000.  This version of the project
            (01) has the accession number NZ_JARUAE010000000, and consists of
            sequences JARUAE010000001-JARUAE010000425.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 63x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045796545.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:55:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,070
            CDSs (total)                      :: 4,976
            Genes (coding)                    :: 4,693
            CDSs (with protein)               :: 4,693
            Genes (RNA)                       :: 94
            rRNAs                             :: 5, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 4, 3, 1 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 283
            CDSs (without protein)            :: 283
            Pseudo Genes (ambiguous residues) :: 0 of 283
            Pseudo Genes (frameshifted)       :: 80 of 283
            Pseudo Genes (incomplete)         :: 204 of 283
            Pseudo Genes (internal stop)      :: 30 of 283
            Pseudo Genes (multiple problems)  :: 29 of 283
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5023450
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="511397-22"
                     /host="cattle"
                     /db_xref="taxon:562"
                     /geo_loc_name="Rwanda: Musanze"
                     /collection_date="2021"
                     /collected_by="Helga Keinprecht"
WGS         JARUAE010000001-JARUAE010000425
WGS_SCAFLD  NZ_JARUAE010000001-NZ_JARUAE010000425
//
LOCUS       NZ_JBGMOV010000000   4823587 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-F05-PYO-294, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMOV000000000
VERSION     NZ_JBGMOV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076780
            Assembly: GCF_045797035.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4823587)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4823587)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMOV000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMOV000000000.  This version of the project
            (01) has the accession number NZ_JBGMOV010000000, and consists of
            sequences JBGMOV010000001-JBGMOV010000085.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 26-OCT-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 106x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797035.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:14:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,751
            CDSs (total)                      :: 4,641
            Genes (coding)                    :: 4,453
            CDSs (with protein)               :: 4,453
            Genes (RNA)                       :: 110
            rRNAs                             :: 8, 6, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 4, 6, 3 (5S, 16S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 188
            CDSs (without protein)            :: 188
            Pseudo Genes (ambiguous residues) :: 0 of 188
            Pseudo Genes (frameshifted)       :: 71 of 188
            Pseudo Genes (incomplete)         :: 115 of 188
            Pseudo Genes (internal stop)      :: 37 of 188
            Pseudo Genes (multiple problems)  :: 30 of 188
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4823587
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-F05-PYO-294"
                     /isolation_source="urine"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2022-06-30"
WGS         JBGMOV010000001-JBGMOV010000085
WGS_SCAFLD  NZ_JBGMOV010000001-NZ_JBGMOV010000085
//
LOCUS       NZ_JBGMPN010000000   5226763 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-C05-PYO-276, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMPN000000000
VERSION     NZ_JBGMPN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076762
            Assembly: GCF_045797495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5226763)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5226763)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMPN000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMPN000000000.  This version of the project
            (01) has the accession number NZ_JBGMPN010000000, and consists of
            sequences JBGMPN010000001-JBGMPN010000159.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 08-OCT-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 95x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797495.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:17:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,231
            CDSs (total)                      :: 5,119
            Genes (coding)                    :: 4,831
            CDSs (with protein)               :: 4,831
            Genes (RNA)                       :: 112
            rRNAs                             :: 9, 11, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 7, 11, 7 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 288
            CDSs (without protein)            :: 288
            Pseudo Genes (ambiguous residues) :: 0 of 288
            Pseudo Genes (frameshifted)       :: 112 of 288
            Pseudo Genes (incomplete)         :: 221 of 288
            Pseudo Genes (internal stop)      :: 49 of 288
            Pseudo Genes (multiple problems)  :: 83 of 288
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5226763
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-C05-PYO-276"
                     /isolation_source="Uterus"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2022-01-28"
WGS         JBGMPN010000001-JBGMPN010000159
WGS_SCAFLD  NZ_JBGMPN010000001-NZ_JBGMPN010000159
//
LOCUS       NZ_JBGMPZ010000000   5120265 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-A05-PYO-240, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMPZ000000000
VERSION     NZ_JBGMPZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076750
            Assembly: GCF_045797735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5120265)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5120265)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMPZ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMPZ000000000.  This version of the project
            (01) has the accession number NZ_JBGMPZ010000000, and consists of
            sequences JBGMPZ010000001-JBGMPZ010000340.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 26-SEP-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 107x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797735.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:33:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,241
            CDSs (total)                      :: 5,151
            Genes (coding)                    :: 4,864
            CDSs (with protein)               :: 4,864
            Genes (RNA)                       :: 90
            rRNAs                             :: 3, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 3, 2 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 287
            CDSs (without protein)            :: 287
            Pseudo Genes (ambiguous residues) :: 1 of 287
            Pseudo Genes (frameshifted)       :: 71 of 287
            Pseudo Genes (incomplete)         :: 218 of 287
            Pseudo Genes (internal stop)      :: 31 of 287
            Pseudo Genes (multiple problems)  :: 32 of 287
            Pseudo Genes (short protein)      :: 1 of 287
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5120265
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-A05-PYO-240"
                     /isolation_source="wound"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2021-07-14"
WGS         JBGMPZ010000001-JBGMPZ010000340
WGS_SCAFLD  NZ_JBGMPZ010000001-NZ_JBGMPZ010000340
//
LOCUS       NZ_JBJLXZ010000000   5050808 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 224 A2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLXZ000000000
VERSION     NZ_JBJLXZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114950
            Assembly: GCF_045799675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5050808)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLXZ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLXZ000000000.  This version of the project
            (01) has the accession number NZ_JBJLXZ010000000, and consists of
            sequences JBJLXZ010000001-JBJLXZ010000202.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 269x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799675.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:44:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,132
            CDSs (total)                      :: 5,029
            Genes (coding)                    :: 4,734
            CDSs (with protein)               :: 4,734
            Genes (RNA)                       :: 103
            rRNAs                             :: 6, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 3, 3, 4 (5S, 16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 295
            CDSs (without protein)            :: 295
            Pseudo Genes (ambiguous residues) :: 0 of 295
            Pseudo Genes (frameshifted)       :: 79 of 295
            Pseudo Genes (incomplete)         :: 221 of 295
            Pseudo Genes (internal stop)      :: 55 of 295
            Pseudo Genes (multiple problems)  :: 51 of 295
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5050808
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="224 A2"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2019-07-13"
WGS         JBJLXZ010000001-JBJLXZ010000202
WGS_SCAFLD  NZ_JBJLXZ010000001-NZ_JBJLXZ010000202
//
LOCUS       NZ_JBJLXP010000000   4867536 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 173 A7, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLXP000000000
VERSION     NZ_JBJLXP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114939
            Assembly: GCF_045799995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4867536)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLXP000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLXP000000000.  This version of the project
            (01) has the accession number NZ_JBJLXP010000000, and consists of
            sequences JBJLXP010000001-JBJLXP010000414.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799995.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:54:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,932
            CDSs (total)                      :: 4,844
            Genes (coding)                    :: 4,618
            CDSs (with protein)               :: 4,618
            Genes (RNA)                       :: 88
            rRNAs                             :: 7, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 5, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 226
            CDSs (without protein)            :: 226
            Pseudo Genes (ambiguous residues) :: 0 of 226
            Pseudo Genes (frameshifted)       :: 60 of 226
            Pseudo Genes (incomplete)         :: 169 of 226
            Pseudo Genes (internal stop)      :: 34 of 226
            Pseudo Genes (multiple problems)  :: 31 of 226
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4867536
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="173 A7"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2018-05-13"
WGS         JBJLXP010000001-JBJLXP010000414
WGS_SCAFLD  NZ_JBJLXP010000001-NZ_JBJLXP010000414
//
LOCUS       NZ_JBJLYC010000000   4801610 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 236 E2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLYC000000000
VERSION     NZ_JBJLYC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114954
            Assembly: GCF_045800355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4801610)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLYC000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLYC000000000.  This version of the project
            (01) has the accession number NZ_JBJLYC010000000, and consists of
            sequences JBJLYC010000001-JBJLYC010000179.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800355.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:59:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,894
            CDSs (total)                      :: 4,793
            Genes (coding)                    :: 4,525
            CDSs (with protein)               :: 4,525
            Genes (RNA)                       :: 101
            rRNAs                             :: 6, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 5, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 268
            CDSs (without protein)            :: 268
            Pseudo Genes (ambiguous residues) :: 0 of 268
            Pseudo Genes (frameshifted)       :: 74 of 268
            Pseudo Genes (incomplete)         :: 188 of 268
            Pseudo Genes (internal stop)      :: 40 of 268
            Pseudo Genes (multiple problems)  :: 33 of 268
            Pseudo Genes (short protein)      :: 1 of 268
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4801610
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="236 E2"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2019-10-22"
WGS         JBJLYC010000001-JBJLYC010000179
WGS_SCAFLD  NZ_JBJLYC010000001-NZ_JBJLYC010000179
//
LOCUS       NZ_JBJLWY010000000   5254063 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 141 I6, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLWY000000000
VERSION     NZ_JBJLWY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114920
            Assembly: GCF_045800755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5254063)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLWY000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLWY000000000.  This version of the project
            (01) has the accession number NZ_JBJLWY010000000, and consists of
            sequences JBJLWY010000001-JBJLWY010000153.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800755.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 14:09:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,246
            CDSs (total)                      :: 5,140
            Genes (coding)                    :: 4,911
            CDSs (with protein)               :: 4,911
            Genes (RNA)                       :: 106
            rRNAs                             :: 5, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 3, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 229
            CDSs (without protein)            :: 229
            Pseudo Genes (ambiguous residues) :: 0 of 229
            Pseudo Genes (frameshifted)       :: 74 of 229
            Pseudo Genes (incomplete)         :: 171 of 229
            Pseudo Genes (internal stop)      :: 31 of 229
            Pseudo Genes (multiple problems)  :: 39 of 229
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5254063
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="141 I6"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2017-06-14"
WGS         JBJLWY010000001-JBJLWY010000153
WGS_SCAFLD  NZ_JBJLWY010000001-NZ_JBJLWY010000153
//
LOCUS       NZ_JBJLWQ010000000   5011330 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 118 D7, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLWQ000000000
VERSION     NZ_JBJLWQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114911
            Assembly: GCF_045800855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5011330)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLWQ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLWQ000000000.  This version of the project
            (01) has the accession number NZ_JBJLWQ010000000, and consists of
            sequences JBJLWQ010000001-JBJLWQ010000166.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800855.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 14:06:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,045
            CDSs (total)                      :: 4,945
            Genes (coding)                    :: 4,673
            CDSs (with protein)               :: 4,673
            Genes (RNA)                       :: 100
            rRNAs                             :: 6, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 272
            CDSs (without protein)            :: 272
            Pseudo Genes (ambiguous residues) :: 0 of 272
            Pseudo Genes (frameshifted)       :: 73 of 272
            Pseudo Genes (incomplete)         :: 197 of 272
            Pseudo Genes (internal stop)      :: 50 of 272
            Pseudo Genes (multiple problems)  :: 42 of 272
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5011330
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="118 D7"
                     /isolation_source="Urines (Colonisation)"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2016-09-09"
WGS         JBJLWQ010000001-JBJLWQ010000166
WGS_SCAFLD  NZ_JBJLWQ010000001-NZ_JBJLWQ010000166
//
LOCUS       NZ_JBJLYD010000000   5164752 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 237 B3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLYD000000000
VERSION     NZ_JBJLYD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114955
            Assembly: GCF_045799535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5164752)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLYD000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLYD000000000.  This version of the project
            (01) has the accession number NZ_JBJLYD010000000, and consists of
            sequences JBJLYD010000001-JBJLYD010000171.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799535.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:41:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,184
            CDSs (total)                      :: 5,080
            Genes (coding)                    :: 4,849
            CDSs (with protein)               :: 4,849
            Genes (RNA)                       :: 104
            rRNAs                             :: 6, 2, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 3, 1, 5 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 231
            CDSs (without protein)            :: 231
            Pseudo Genes (ambiguous residues) :: 0 of 231
            Pseudo Genes (frameshifted)       :: 52 of 231
            Pseudo Genes (incomplete)         :: 175 of 231
            Pseudo Genes (internal stop)      :: 39 of 231
            Pseudo Genes (multiple problems)  :: 31 of 231
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5164752
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="237 B3"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2019-11-01"
WGS         JBJLYD010000001-JBJLYD010000171
WGS_SCAFLD  NZ_JBJLYD010000001-NZ_JBJLYD010000171
//
LOCUS       NZ_JBJLXU010000000   4910585 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 213 A3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLXU000000000
VERSION     NZ_JBJLXU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114945
            Assembly: GCF_045799915.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4910585)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLXU000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLXU000000000.  This version of the project
            (01) has the accession number NZ_JBJLXU010000000, and consists of
            sequences JBJLXU010000001-JBJLXU010000160.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799915.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:37:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,853
            CDSs (total)                      :: 4,754
            Genes (coding)                    :: 4,515
            CDSs (with protein)               :: 4,515
            Genes (RNA)                       :: 99
            rRNAs                             :: 5, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 239
            CDSs (without protein)            :: 239
            Pseudo Genes (ambiguous residues) :: 0 of 239
            Pseudo Genes (frameshifted)       :: 71 of 239
            Pseudo Genes (incomplete)         :: 165 of 239
            Pseudo Genes (internal stop)      :: 46 of 239
            Pseudo Genes (multiple problems)  :: 37 of 239
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4910585
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="213 A3"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2019-04-15"
WGS         JBJLXU010000001-JBJLXU010000160
WGS_SCAFLD  NZ_JBJLXU010000001-NZ_JBJLXU010000160
//
LOCUS       NZ_JBJLYZ010000000   5147516 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 268 B5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLYZ000000000
VERSION     NZ_JBJLYZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114977
            Assembly: GCF_045799595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5147516)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLYZ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLYZ000000000.  This version of the project
            (01) has the accession number NZ_JBJLYZ010000000, and consists of
            sequences JBJLYZ010000001-JBJLYZ010000132.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799595.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:40:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,181
            CDSs (total)                      :: 5,082
            Genes (coding)                    :: 4,863
            CDSs (with protein)               :: 4,863
            Genes (RNA)                       :: 99
            rRNAs                             :: 7, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 5, 1, 4 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 219
            CDSs (without protein)            :: 219
            Pseudo Genes (ambiguous residues) :: 0 of 219
            Pseudo Genes (frameshifted)       :: 59 of 219
            Pseudo Genes (incomplete)         :: 159 of 219
            Pseudo Genes (internal stop)      :: 33 of 219
            Pseudo Genes (multiple problems)  :: 29 of 219
            Pseudo Genes (short protein)      :: 1 of 219
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5147516
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="268 B5"
                     /isolation_source="Urines (Infection)"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2018-09-25"
WGS         JBJLYZ010000001-JBJLYZ010000132
WGS_SCAFLD  NZ_JBJLYZ010000001-NZ_JBJLYZ010000132
//
LOCUS       NZ_JBJLZF010000000   4757807 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 268 C2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLZF000000000
VERSION     NZ_JBJLZF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114983
            Assembly: GCF_045799445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4757807)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLZF000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLZF000000000.  This version of the project
            (01) has the accession number NZ_JBJLZF010000000, and consists of
            sequences JBJLZF010000001-JBJLZF010000113.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799445.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:30:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,735
            CDSs (total)                      :: 4,631
            Genes (coding)                    :: 4,402
            CDSs (with protein)               :: 4,402
            Genes (RNA)                       :: 104
            rRNAs                             :: 5, 4, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 3, 4, 6 (5S, 16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 229
            CDSs (without protein)            :: 229
            Pseudo Genes (ambiguous residues) :: 0 of 229
            Pseudo Genes (frameshifted)       :: 77 of 229
            Pseudo Genes (incomplete)         :: 155 of 229
            Pseudo Genes (internal stop)      :: 40 of 229
            Pseudo Genes (multiple problems)  :: 40 of 229
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4757807
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="268 C2"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2019-03-07"
WGS         JBJLZF010000001-JBJLZF010000113
WGS_SCAFLD  NZ_JBJLZF010000001-NZ_JBJLZF010000113
//
LOCUS       NZ_JBJLZH010000000   4758791 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 268 C4, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLZH000000000
VERSION     NZ_JBJLZH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114985
            Assembly: GCF_045799505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4758791)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLZH000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLZH000000000.  This version of the project
            (01) has the accession number NZ_JBJLZH010000000, and consists of
            sequences JBJLZH010000001-JBJLZH010000108.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799505.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:16:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,728
            CDSs (total)                      :: 4,626
            Genes (coding)                    :: 4,396
            CDSs (with protein)               :: 4,396
            Genes (RNA)                       :: 102
            rRNAs                             :: 5, 3, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 3, 3, 5 (5S, 16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 230
            CDSs (without protein)            :: 230
            Pseudo Genes (ambiguous residues) :: 0 of 230
            Pseudo Genes (frameshifted)       :: 78 of 230
            Pseudo Genes (incomplete)         :: 157 of 230
            Pseudo Genes (internal stop)      :: 41 of 230
            Pseudo Genes (multiple problems)  :: 42 of 230
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4758791
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="268 C4"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2019-01-08"
WGS         JBJLZH010000001-JBJLZH010000108
WGS_SCAFLD  NZ_JBJLZH010000001-NZ_JBJLZH010000108
//
LOCUS       NZ_JBJLXK010000000   4816694 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 167 H5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLXK000000000
VERSION     NZ_JBJLXK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114933
            Assembly: GCF_045799835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4816694)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLXK000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLXK000000000.  This version of the project
            (01) has the accession number NZ_JBJLXK010000000, and consists of
            sequences JBJLXK010000001-JBJLXK010000151.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799835.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:39:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,772
            CDSs (total)                      :: 4,684
            Genes (coding)                    :: 4,456
            CDSs (with protein)               :: 4,456
            Genes (RNA)                       :: 88
            rRNAs                             :: 5, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 3, 3, 4 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 228
            CDSs (without protein)            :: 228
            Pseudo Genes (ambiguous residues) :: 0 of 228
            Pseudo Genes (frameshifted)       :: 71 of 228
            Pseudo Genes (incomplete)         :: 161 of 228
            Pseudo Genes (internal stop)      :: 40 of 228
            Pseudo Genes (multiple problems)  :: 40 of 228
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4816694
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="167 H5"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2018-03-22"
WGS         JBJLXK010000001-JBJLXK010000151
WGS_SCAFLD  NZ_JBJLXK010000001-NZ_JBJLXK010000151
//
LOCUS       NZ_JBJLXW010000000   4757750 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 218 H6, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLXW000000000
VERSION     NZ_JBJLXW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114947
            Assembly: GCF_045799865.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4757750)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLXW000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLXW000000000.  This version of the project
            (01) has the accession number NZ_JBJLXW010000000, and consists of
            sequences JBJLXW010000001-JBJLXW010000153.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799865.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:36:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,729
            CDSs (total)                      :: 4,628
            Genes (coding)                    :: 4,384
            CDSs (with protein)               :: 4,384
            Genes (RNA)                       :: 101
            rRNAs                             :: 5, 3, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 3, 5 (5S, 16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 244
            CDSs (without protein)            :: 244
            Pseudo Genes (ambiguous residues) :: 0 of 244
            Pseudo Genes (frameshifted)       :: 75 of 244
            Pseudo Genes (incomplete)         :: 173 of 244
            Pseudo Genes (internal stop)      :: 39 of 244
            Pseudo Genes (multiple problems)  :: 41 of 244
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4757750
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="218 H6"
                     /isolation_source="Urines (Infection)"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2019-06-06"
WGS         JBJLXW010000001-JBJLXW010000153
WGS_SCAFLD  NZ_JBJLXW010000001-NZ_JBJLXW010000153
//
LOCUS       NZ_JBIXBS010000000   5203725 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1149, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXBS000000000
VERSION     NZ_JBIXBS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247309
            Assembly: GCF_045619825.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5203725)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXBS000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXBS000000000.  This version of the project
            (01) has the accession number NZ_JBIXBS010000000, and consists of
            sequences JBIXBS010000001-JBIXBS010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 274x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045619825.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:09:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,195
            CDSs (total)                      :: 5,070
            Genes (coding)                    :: 4,837
            CDSs (with protein)               :: 4,837
            Genes (RNA)                       :: 125
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 92
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 233
            CDSs (without protein)            :: 233
            Pseudo Genes (ambiguous residues) :: 0 of 233
            Pseudo Genes (frameshifted)       :: 118 of 233
            Pseudo Genes (incomplete)         :: 116 of 233
            Pseudo Genes (internal stop)      :: 30 of 233
            Pseudo Genes (multiple problems)  :: 30 of 233
            Pseudo Genes (short protein)      :: 1 of 233
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5203725
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1149"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXBS010000001-JBIXBS010000007
WGS_SCAFLD  NZ_JBIXBS010000001-NZ_JBIXBS010000007
//
LOCUS       NZ_JBIXFE010000000   5222290 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1048, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXFE000000000
VERSION     NZ_JBIXFE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247219
            Assembly: GCF_045621605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5222290)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXFE000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXFE000000000.  This version of the project
            (01) has the accession number NZ_JBIXFE010000000, and consists of
            sequences JBIXFE010000001-JBIXFE010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 240x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045621605.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:28:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,179
            CDSs (total)                      :: 5,070
            Genes (coding)                    :: 4,711
            CDSs (with protein)               :: 4,711
            Genes (RNA)                       :: 109
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 359
            CDSs (without protein)            :: 359
            Pseudo Genes (ambiguous residues) :: 0 of 359
            Pseudo Genes (frameshifted)       :: 223 of 359
            Pseudo Genes (incomplete)         :: 164 of 359
            Pseudo Genes (internal stop)      :: 36 of 359
            Pseudo Genes (multiple problems)  :: 58 of 359
            Pseudo Genes (short protein)      :: 1 of 359
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5222290
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1048"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXFE010000001-JBIXFE010000009
WGS_SCAFLD  NZ_JBIXFE010000001-NZ_JBIXFE010000009
//
LOCUS       NZ_JBGMOX010000000   5098220 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-F03-PYO-136, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMOX000000000
VERSION     NZ_JBGMOX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076778
            Assembly: GCF_045797085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5098220)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5098220)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMOX000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMOX000000000.  This version of the project
            (01) has the accession number NZ_JBGMOX010000000, and consists of
            sequences JBGMOX010000001-JBGMOX010000079.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 24-OCT-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 91x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797085.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:00:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,085
            CDSs (total)                      :: 4,973
            Genes (coding)                    :: 4,756
            CDSs (with protein)               :: 4,756
            Genes (RNA)                       :: 112
            rRNAs                             :: 7, 10, 11 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 5, 10, 11 (5S, 16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 217
            CDSs (without protein)            :: 217
            Pseudo Genes (ambiguous residues) :: 0 of 217
            Pseudo Genes (frameshifted)       :: 94 of 217
            Pseudo Genes (incomplete)         :: 154 of 217
            Pseudo Genes (internal stop)      :: 42 of 217
            Pseudo Genes (multiple problems)  :: 67 of 217
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5098220
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-F03-PYO-136"
                     /isolation_source="Uterus"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2020-10-04"
WGS         JBGMOX010000001-JBGMOX010000079
WGS_SCAFLD  NZ_JBGMOX010000001-NZ_JBGMOX010000079
//
LOCUS       NZ_JBIGUO010000000   5293193 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E657, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGUO000000000
VERSION     NZ_JBIGUO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235632
            Assembly: GCF_045581165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5293193)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGUO000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGUO000000000.  This version of the project
            (01) has the accession number NZ_JBIGUO010000000, and consists of
            sequences JBIGUO010000001-JBIGUO010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 138x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045581165.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:08:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,297
            CDSs (total)                      :: 5,187
            Genes (coding)                    :: 4,855
            CDSs (with protein)               :: 4,855
            Genes (RNA)                       :: 110
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 332
            CDSs (without protein)            :: 332
            Pseudo Genes (ambiguous residues) :: 0 of 332
            Pseudo Genes (frameshifted)       :: 180 of 332
            Pseudo Genes (incomplete)         :: 170 of 332
            Pseudo Genes (internal stop)      :: 53 of 332
            Pseudo Genes (multiple problems)  :: 63 of 332
            Pseudo Genes (short protein)      :: 1 of 332
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5293193
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E657"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGUO010000001-JBIGUO010000004
WGS_SCAFLD  NZ_JBIGUO010000001-NZ_JBIGUO010000004
//
LOCUS       NZ_JARTZP010000000   5055781 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 511412-22, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JARTZP000000000
VERSION     NZ_JARTZP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34004156
            Assembly: GCF_045796085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5055781)
  AUTHORS   Irimaso,E., Keinprecht,H., Szostak,M.P., Cabal Rosel,A., Stessl,B.,
            Desvars-Larrive,A., Ntakirutimana,C., Masengesho,G., Fischer,O.W.,
            Wittek,T., Mueller,E., Fessler,A.T., Braun,S.F., Schwarz,S.,
            Monecke,S., Ehricht,R., Spergser,J., Ruppitsch,W. and Loncaric,I.
  TITLE     Presence of broad-spectrum cephalosporin-resistant Enterobacterales
            isolated from ruminants in Rwanda
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5055781)
  AUTHORS   Szostak,M.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-MAR-2023) Department of Pathobiology, Institute of
            Microbiology, Veterinary University Vienna, Veterinaerplatz 1,
            Vienna 1210, Austria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARTZP000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JARTZP000000000.  This version of the project
            (01) has the accession number NZ_JARTZP010000000, and consists of
            sequences JARTZP010000001-JARTZP010000324.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 37x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045796085.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:56:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,088
            CDSs (total)                      :: 4,988
            Genes (coding)                    :: 4,746
            CDSs (with protein)               :: 4,746
            Genes (RNA)                       :: 100
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 242
            CDSs (without protein)            :: 242
            Pseudo Genes (ambiguous residues) :: 0 of 242
            Pseudo Genes (frameshifted)       :: 87 of 242
            Pseudo Genes (incomplete)         :: 166 of 242
            Pseudo Genes (internal stop)      :: 23 of 242
            Pseudo Genes (multiple problems)  :: 32 of 242
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5055781
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="511412-22"
                     /host="cattle"
                     /db_xref="taxon:562"
                     /geo_loc_name="Rwanda: Musanze"
                     /collection_date="2021"
                     /collected_by="Helga Keinprecht"
WGS         JARTZP010000001-JARTZP010000324
WGS_SCAFLD  NZ_JARTZP010000001-NZ_JARTZP010000324
//
LOCUS       NZ_JBGMPM010000000   5130270 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-C06-PYO-325, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMPM000000000
VERSION     NZ_JBGMPM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076763
            Assembly: GCF_045797525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5130270)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5130270)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMPM000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMPM000000000.  This version of the project
            (01) has the accession number NZ_JBGMPM010000000, and consists of
            sequences JBGMPM010000001-JBGMPM010000166.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 09-OCT-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 96x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797525.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:14:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,081
            CDSs (total)                      :: 4,984
            Genes (coding)                    :: 4,703
            CDSs (with protein)               :: 4,703
            Genes (RNA)                       :: 97
            rRNAs                             :: 6, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 4, 3, 4 (5S, 16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 281
            CDSs (without protein)            :: 281
            Pseudo Genes (ambiguous residues) :: 0 of 281
            Pseudo Genes (frameshifted)       :: 104 of 281
            Pseudo Genes (incomplete)         :: 219 of 281
            Pseudo Genes (internal stop)      :: 45 of 281
            Pseudo Genes (multiple problems)  :: 79 of 281
            Pseudo Genes (short protein)      :: 1 of 281
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5130270
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-C06-PYO-325"
                     /isolation_source="urine"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2023-01-05"
WGS         JBGMPM010000001-JBGMPM010000166
WGS_SCAFLD  NZ_JBGMPM010000001-NZ_JBGMPM010000166
//
LOCUS       NZ_JBIWZR010000000   5482513 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1213, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIWZR000000000
VERSION     NZ_JBIWZR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247362
            Assembly: GCF_045618685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5482513)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIWZR000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIWZR000000000.  This version of the project
            (01) has the accession number NZ_JBIWZR010000000, and consists of
            sequences JBIWZR010000001-JBIWZR010000022.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 189x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045618685.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:22:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,322
            CDSs (total)                      :: 5,203
            Genes (coding)                    :: 4,874
            CDSs (with protein)               :: 4,874
            Genes (RNA)                       :: 119
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 85
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 329
            CDSs (without protein)            :: 329
            Pseudo Genes (ambiguous residues) :: 0 of 329
            Pseudo Genes (frameshifted)       :: 183 of 329
            Pseudo Genes (incomplete)         :: 170 of 329
            Pseudo Genes (internal stop)      :: 53 of 329
            Pseudo Genes (multiple problems)  :: 70 of 329
            Pseudo Genes (short protein)      :: 1 of 329
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5482513
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1213"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIWZR010000001-JBIWZR010000022
WGS_SCAFLD  NZ_JBIWZR010000001-NZ_JBIWZR010000022
//
LOCUS       NZ_JBIWZV010000000   5410949 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1209, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIWZV000000000
VERSION     NZ_JBIWZV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247358
            Assembly: GCF_045618805.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5410949)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIWZV000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIWZV000000000.  This version of the project
            (01) has the accession number NZ_JBIWZV010000000, and consists of
            sequences JBIWZV010000001-JBIWZV010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 256x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045618805.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:18:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,234
            CDSs (total)                      :: 5,112
            Genes (coding)                    :: 4,842
            CDSs (with protein)               :: 4,842
            Genes (RNA)                       :: 122
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 90
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 270
            CDSs (without protein)            :: 270
            Pseudo Genes (ambiguous residues) :: 0 of 270
            Pseudo Genes (frameshifted)       :: 122 of 270
            Pseudo Genes (incomplete)         :: 162 of 270
            Pseudo Genes (internal stop)      :: 50 of 270
            Pseudo Genes (multiple problems)  :: 57 of 270
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5410949
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1209"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIWZV010000001-JBIWZV010000006
WGS_SCAFLD  NZ_JBIWZV010000001-NZ_JBIWZV010000006
//
LOCUS       NZ_JBIXCZ010000000   5432405 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1113, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXCZ000000000
VERSION     NZ_JBIXCZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247276
            Assembly: GCF_045620485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5432405)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXCZ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXCZ000000000.  This version of the project
            (01) has the accession number NZ_JBIXCZ010000000, and consists of
            sequences JBIXCZ010000001-JBIXCZ010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 251x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045620485.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:27:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,465
            CDSs (total)                      :: 5,352
            Genes (coding)                    :: 4,990
            CDSs (with protein)               :: 4,990
            Genes (RNA)                       :: 113
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 362
            CDSs (without protein)            :: 362
            Pseudo Genes (ambiguous residues) :: 0 of 362
            Pseudo Genes (frameshifted)       :: 196 of 362
            Pseudo Genes (incomplete)         :: 197 of 362
            Pseudo Genes (internal stop)      :: 50 of 362
            Pseudo Genes (multiple problems)  :: 70 of 362
            Pseudo Genes (short protein)      :: 1 of 362
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5432405
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1113"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXCZ010000001-JBIXCZ010000006
WGS_SCAFLD  NZ_JBIXCZ010000001-NZ_JBIXCZ010000006
//
LOCUS       NZ_JBIXEB010000000   5296631 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1081, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXEB000000000
VERSION     NZ_JBIXEB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247248
            Assembly: GCF_045621085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5296631)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXEB000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXEB000000000.  This version of the project
            (01) has the accession number NZ_JBIXEB010000000, and consists of
            sequences JBIXEB010000001-JBIXEB010000003.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 131x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045621085.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:27:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,275
            CDSs (total)                      :: 5,164
            Genes (coding)                    :: 4,844
            CDSs (with protein)               :: 4,844
            Genes (RNA)                       :: 111
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 320
            CDSs (without protein)            :: 320
            Pseudo Genes (ambiguous residues) :: 0 of 320
            Pseudo Genes (frameshifted)       :: 180 of 320
            Pseudo Genes (incomplete)         :: 167 of 320
            Pseudo Genes (internal stop)      :: 44 of 320
            Pseudo Genes (multiple problems)  :: 62 of 320
            Pseudo Genes (short protein)      :: 1 of 320
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5296631
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1081"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXEB010000001-JBIXEB010000003
WGS_SCAFLD  NZ_JBIXEB010000001-NZ_JBIXEB010000003
//
LOCUS       NZ_JBJLYI010000000   4721977 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 241 C6, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLYI000000000
VERSION     NZ_JBJLYI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114960
            Assembly: GCF_045799015.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4721977)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLYI000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLYI000000000.  This version of the project
            (01) has the accession number NZ_JBJLYI010000000, and consists of
            sequences JBJLYI010000001-JBJLYI010000143.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799015.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:28:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,715
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,389
            CDSs (with protein)               :: 4,389
            Genes (RNA)                       :: 104
            rRNAs                             :: 5, 3, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 3, 3, 5 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 222
            CDSs (without protein)            :: 222
            Pseudo Genes (ambiguous residues) :: 0 of 222
            Pseudo Genes (frameshifted)       :: 72 of 222
            Pseudo Genes (incomplete)         :: 153 of 222
            Pseudo Genes (internal stop)      :: 39 of 222
            Pseudo Genes (multiple problems)  :: 38 of 222
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4721977
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="241 C6"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2019-12-05"
WGS         JBJLYI010000001-JBJLYI010000143
WGS_SCAFLD  NZ_JBJLYI010000001-NZ_JBJLYI010000143
//
LOCUS       NZ_JBIHCY010000000   4970946 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1023, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHCY000000000
VERSION     NZ_JBIHCY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235343
            Assembly: GCF_045607205.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4970946)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHCY000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHCY000000000.  This version of the project
            (01) has the accession number NZ_JBIHCY010000000, and consists of
            sequences JBIHCY010000001-JBIHCY010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 362x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045607205.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:53:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,928
            CDSs (total)                      :: 4,804
            Genes (coding)                    :: 4,474
            CDSs (with protein)               :: 4,474
            Genes (RNA)                       :: 124
            rRNAs                             :: 7, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 92
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 330
            CDSs (without protein)            :: 330
            Pseudo Genes (ambiguous residues) :: 0 of 330
            Pseudo Genes (frameshifted)       :: 157 of 330
            Pseudo Genes (incomplete)         :: 170 of 330
            Pseudo Genes (internal stop)      :: 53 of 330
            Pseudo Genes (multiple problems)  :: 44 of 330
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4970946
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1023"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHCY010000001-JBIHCY010000009
WGS_SCAFLD  NZ_JBIHCY010000001-NZ_JBIHCY010000009
//
LOCUS       NZ_JBIXFC010000000   5006331 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1050, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXFC000000000
VERSION     NZ_JBIXFC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247221
            Assembly: GCF_045621585.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5006331)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXFC000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXFC000000000.  This version of the project
            (01) has the accession number NZ_JBIXFC010000000, and consists of
            sequences JBIXFC010000001-JBIXFC010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 472x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045621585.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:21:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,932
            CDSs (total)                      :: 4,812
            Genes (coding)                    :: 4,514
            CDSs (with protein)               :: 4,514
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 7, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 84
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 298
            CDSs (without protein)            :: 298
            Pseudo Genes (ambiguous residues) :: 0 of 298
            Pseudo Genes (frameshifted)       :: 161 of 298
            Pseudo Genes (incomplete)         :: 145 of 298
            Pseudo Genes (internal stop)      :: 46 of 298
            Pseudo Genes (multiple problems)  :: 49 of 298
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5006331
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1050"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXFC010000001-JBIXFC010000008
WGS_SCAFLD  NZ_JBIXFC010000001-NZ_JBIXFC010000008
//
LOCUS       NZ_JBJLZE010000000   4898168 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 268 C1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLZE000000000
VERSION     NZ_JBJLZE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114982
            Assembly: GCF_045799245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4898168)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLZE000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLZE000000000.  This version of the project
            (01) has the accession number NZ_JBJLZE010000000, and consists of
            sequences JBJLZE010000001-JBJLZE010000133.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799245.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:27:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,870
            CDSs (total)                      :: 4,776
            Genes (coding)                    :: 4,575
            CDSs (with protein)               :: 4,575
            Genes (RNA)                       :: 94
            rRNAs                             :: 5, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 4, 3, 4 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 201
            CDSs (without protein)            :: 201
            Pseudo Genes (ambiguous residues) :: 0 of 201
            Pseudo Genes (frameshifted)       :: 62 of 201
            Pseudo Genes (incomplete)         :: 142 of 201
            Pseudo Genes (internal stop)      :: 34 of 201
            Pseudo Genes (multiple problems)  :: 33 of 201
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4898168
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="268 C1"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2019-03-03"
WGS         JBJLZE010000001-JBJLZE010000133
WGS_SCAFLD  NZ_JBJLZE010000001-NZ_JBJLZE010000133
//
LOCUS       NZ_JBIHFD010000000   5161548 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E926, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHFD000000000
VERSION     NZ_JBIHFD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235263
            Assembly: GCF_045608285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5161548)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHFD000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHFD000000000.  This version of the project
            (01) has the accession number NZ_JBIHFD010000000, and consists of
            sequences JBIHFD010000001-JBIHFD010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 117x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045608285.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:46:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,070
            CDSs (total)                      :: 4,951
            Genes (coding)                    :: 4,766
            CDSs (with protein)               :: 4,766
            Genes (RNA)                       :: 119
            rRNAs                             :: 8, 8, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 185
            CDSs (without protein)            :: 185
            Pseudo Genes (ambiguous residues) :: 0 of 185
            Pseudo Genes (frameshifted)       :: 90 of 185
            Pseudo Genes (incomplete)         :: 100 of 185
            Pseudo Genes (internal stop)      :: 21 of 185
            Pseudo Genes (multiple problems)  :: 23 of 185
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5161548
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E926"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHFD010000001-JBIHFD010000009
WGS_SCAFLD  NZ_JBIHFD010000001-NZ_JBIHFD010000009
//
LOCUS       NZ_JBJLYB010000000   4990318 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 232 B8, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLYB000000000
VERSION     NZ_JBJLYB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114952
            Assembly: GCF_045799635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4990318)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLYB000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLYB000000000.  This version of the project
            (01) has the accession number NZ_JBJLYB010000000, and consists of
            sequences JBJLYB010000001-JBJLYB010000158.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799635.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:32:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,962
            CDSs (total)                      :: 4,859
            Genes (coding)                    :: 4,611
            CDSs (with protein)               :: 4,611
            Genes (RNA)                       :: 103
            rRNAs                             :: 6, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 4, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 248
            CDSs (without protein)            :: 248
            Pseudo Genes (ambiguous residues) :: 0 of 248
            Pseudo Genes (frameshifted)       :: 75 of 248
            Pseudo Genes (incomplete)         :: 172 of 248
            Pseudo Genes (internal stop)      :: 46 of 248
            Pseudo Genes (multiple problems)  :: 40 of 248
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4990318
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="232 B8"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2019-09-22"
WGS         JBJLYB010000001-JBJLYB010000158
WGS_SCAFLD  NZ_JBJLYB010000001-NZ_JBJLYB010000158
//
LOCUS       NZ_JBJLXS010000000   4860191 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 186 G10, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLXS000000000
VERSION     NZ_JBJLXS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114942
            Assembly: GCF_045799935.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4860191)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLXS000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLXS000000000.  This version of the project
            (01) has the accession number NZ_JBJLXS010000000, and consists of
            sequences JBJLXS010000001-JBJLXS010000116.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799935.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:37:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,813
            CDSs (total)                      :: 4,723
            Genes (coding)                    :: 4,486
            CDSs (with protein)               :: 4,486
            Genes (RNA)                       :: 90
            rRNAs                             :: 6, 4, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 4, 3, 5 (5S, 16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 237
            CDSs (without protein)            :: 237
            Pseudo Genes (ambiguous residues) :: 0 of 237
            Pseudo Genes (frameshifted)       :: 70 of 237
            Pseudo Genes (incomplete)         :: 169 of 237
            Pseudo Genes (internal stop)      :: 41 of 237
            Pseudo Genes (multiple problems)  :: 37 of 237
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4860191
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="186 G10"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2018-09-07"
WGS         JBJLXS010000001-JBJLXS010000116
WGS_SCAFLD  NZ_JBJLXS010000001-NZ_JBJLXS010000116
//
LOCUS       NZ_JARTZQ010000000   4631641 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 511411-22, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JARTZQ000000000
VERSION     NZ_JARTZQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34004155
            Assembly: GCF_045796145.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4631641)
  AUTHORS   Irimaso,E., Keinprecht,H., Szostak,M.P., Cabal Rosel,A., Stessl,B.,
            Desvars-Larrive,A., Ntakirutimana,C., Masengesho,G., Fischer,O.W.,
            Wittek,T., Mueller,E., Fessler,A.T., Braun,S.F., Schwarz,S.,
            Monecke,S., Ehricht,R., Spergser,J., Ruppitsch,W. and Loncaric,I.
  TITLE     Presence of broad-spectrum cephalosporin-resistant Enterobacterales
            isolated from ruminants in Rwanda
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4631641)
  AUTHORS   Szostak,M.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-MAR-2023) Department of Pathobiology, Institute of
            Microbiology, Veterinary University Vienna, Veterinaerplatz 1,
            Vienna 1210, Austria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARTZQ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JARTZQ000000000.  This version of the project
            (01) has the accession number NZ_JARTZQ010000000, and consists of
            sequences JARTZQ010000001-JARTZQ010000420.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 55x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045796145.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:03:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,749
            CDSs (total)                      :: 4,665
            Genes (coding)                    :: 4,371
            CDSs (with protein)               :: 4,371
            Genes (RNA)                       :: 84
            rRNAs                             :: 2, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 294
            CDSs (without protein)            :: 294
            Pseudo Genes (ambiguous residues) :: 0 of 294
            Pseudo Genes (frameshifted)       :: 66 of 294
            Pseudo Genes (incomplete)         :: 225 of 294
            Pseudo Genes (internal stop)      :: 41 of 294
            Pseudo Genes (multiple problems)  :: 33 of 294
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4631641
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="511411-22"
                     /host="cattle"
                     /db_xref="taxon:562"
                     /geo_loc_name="Rwanda: Musanze"
                     /collection_date="2021"
                     /collected_by="Helga Keinprecht"
WGS         JARTZQ010000001-JARTZQ010000420
WGS_SCAFLD  NZ_JARTZQ010000001-NZ_JARTZQ010000420
//
LOCUS       NZ_JBIHIK010000000   5343871 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E799, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHIK000000000
VERSION     NZ_JBIHIK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235153
            Assembly: GCF_045610005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5343871)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHIK000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHIK000000000.  This version of the project
            (01) has the accession number NZ_JBIHIK010000000, and consists of
            sequences JBIHIK010000001-JBIHIK010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 191x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045610005.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:15:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,234
            CDSs (total)                      :: 5,118
            Genes (coding)                    :: 4,835
            CDSs (with protein)               :: 4,835
            Genes (RNA)                       :: 116
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 283
            CDSs (without protein)            :: 283
            Pseudo Genes (ambiguous residues) :: 0 of 283
            Pseudo Genes (frameshifted)       :: 152 of 283
            Pseudo Genes (incomplete)         :: 170 of 283
            Pseudo Genes (internal stop)      :: 45 of 283
            Pseudo Genes (multiple problems)  :: 71 of 283
            Pseudo Genes (short protein)      :: 1 of 283
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5343871
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E799"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHIK010000001-JBIHIK010000008
WGS_SCAFLD  NZ_JBIHIK010000001-NZ_JBIHIK010000008
//
LOCUS       NZ_JBJLXH010000000   4976620 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 164 I1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLXH000000000
VERSION     NZ_JBJLXH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114930
            Assembly: GCF_045800085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4976620)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLXH000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLXH000000000.  This version of the project
            (01) has the accession number NZ_JBJLXH010000000, and consists of
            sequences JBJLXH010000001-JBJLXH010000170.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800085.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:32:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,979
            CDSs (total)                      :: 4,885
            Genes (coding)                    :: 4,673
            CDSs (with protein)               :: 4,673
            Genes (RNA)                       :: 94
            rRNAs                             :: 7, 4, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 5, 4, 6 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 212
            CDSs (without protein)            :: 212
            Pseudo Genes (ambiguous residues) :: 0 of 212
            Pseudo Genes (frameshifted)       :: 66 of 212
            Pseudo Genes (incomplete)         :: 149 of 212
            Pseudo Genes (internal stop)      :: 38 of 212
            Pseudo Genes (multiple problems)  :: 36 of 212
            Pseudo Genes (short protein)      :: 1 of 212
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4976620
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="164 I1"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2018-02-17"
WGS         JBJLXH010000001-JBJLXH010000170
WGS_SCAFLD  NZ_JBJLXH010000001-NZ_JBJLXH010000170
//
LOCUS       NZ_JARTZV010000000   4564907 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 511406-22, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JARTZV000000000
VERSION     NZ_JARTZV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34004150
            Assembly: GCF_045796155.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4564907)
  AUTHORS   Irimaso,E., Keinprecht,H., Szostak,M.P., Cabal Rosel,A., Stessl,B.,
            Desvars-Larrive,A., Ntakirutimana,C., Masengesho,G., Fischer,O.W.,
            Wittek,T., Mueller,E., Fessler,A.T., Braun,S.F., Schwarz,S.,
            Monecke,S., Ehricht,R., Spergser,J., Ruppitsch,W. and Loncaric,I.
  TITLE     Presence of broad-spectrum cephalosporin-resistant Enterobacterales
            isolated from ruminants in Rwanda
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4564907)
  AUTHORS   Szostak,M.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-MAR-2023) Department of Pathobiology, Institute of
            Microbiology, Veterinary University Vienna, Veterinaerplatz 1,
            Vienna 1210, Austria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARTZV000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JARTZV000000000.  This version of the project
            (01) has the accession number NZ_JARTZV010000000, and consists of
            sequences JARTZV010000001-JARTZV010000254.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 39x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045796155.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:54:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,565
            CDSs (total)                      :: 4,482
            Genes (coding)                    :: 4,222
            CDSs (with protein)               :: 4,222
            Genes (RNA)                       :: 83
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 2 (5S, 16S)
            tRNAs                             :: 64
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 260
            CDSs (without protein)            :: 260
            Pseudo Genes (ambiguous residues) :: 0 of 260
            Pseudo Genes (frameshifted)       :: 67 of 260
            Pseudo Genes (incomplete)         :: 181 of 260
            Pseudo Genes (internal stop)      :: 50 of 260
            Pseudo Genes (multiple problems)  :: 35 of 260
            Pseudo Genes (short protein)      :: 1 of 260
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4564907
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="511406-22"
                     /host="cattle"
                     /db_xref="taxon:562"
                     /geo_loc_name="Rwanda: Musanze"
                     /collection_date="2021"
                     /collected_by="Helga Keinprecht"
WGS         JARTZV010000001-JARTZV010000254
WGS_SCAFLD  NZ_JARTZV010000001-NZ_JARTZV010000254
//
LOCUS       NZ_JBIXCE010000000   5335884 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1136, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXCE000000000
VERSION     NZ_JBIXCE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247297
            Assembly: GCF_045620035.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5335884)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXCE000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXCE000000000.  This version of the project
            (01) has the accession number NZ_JBIXCE010000000, and consists of
            sequences JBIXCE010000001-JBIXCE010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 274x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045620035.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:26:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,315
            CDSs (total)                      :: 5,198
            Genes (coding)                    :: 4,861
            CDSs (with protein)               :: 4,861
            Genes (RNA)                       :: 117
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 90
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 337
            CDSs (without protein)            :: 337
            Pseudo Genes (ambiguous residues) :: 0 of 337
            Pseudo Genes (frameshifted)       :: 191 of 337
            Pseudo Genes (incomplete)         :: 176 of 337
            Pseudo Genes (internal stop)      :: 39 of 337
            Pseudo Genes (multiple problems)  :: 61 of 337
            Pseudo Genes (short protein)      :: 1 of 337
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5335884
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1136"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXCE010000001-JBIXCE010000005
WGS_SCAFLD  NZ_JBIXCE010000001-NZ_JBIXCE010000005
//
LOCUS       NZ_JBIHJV010000000   5191808 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E735, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHJV000000000
VERSION     NZ_JBIHJV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235100
            Assembly: GCF_045610725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5191808)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHJV000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHJV000000000.  This version of the project
            (01) has the accession number NZ_JBIHJV010000000, and consists of
            sequences JBIHJV010000001-JBIHJV010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 199x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045610725.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:18:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,025
            CDSs (total)                      :: 4,906
            Genes (coding)                    :: 4,700
            CDSs (with protein)               :: 4,700
            Genes (RNA)                       :: 119
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 206
            CDSs (without protein)            :: 206
            Pseudo Genes (ambiguous residues) :: 0 of 206
            Pseudo Genes (frameshifted)       :: 125 of 206
            Pseudo Genes (incomplete)         :: 94 of 206
            Pseudo Genes (internal stop)      :: 19 of 206
            Pseudo Genes (multiple problems)  :: 30 of 206
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5191808
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E735"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHJV010000001-JBIHJV010000005
WGS_SCAFLD  NZ_JBIHJV010000001-NZ_JBIHJV010000005
//
LOCUS       NZ_JBJLYX010000000   5472364 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 264 E2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLYX000000000
VERSION     NZ_JBJLYX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114975
            Assembly: GCF_045800235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5472364)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLYX000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLYX000000000.  This version of the project
            (01) has the accession number NZ_JBJLYX010000000, and consists of
            sequences JBJLYX010000001-JBJLYX010000152.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800235.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:40:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,520
            CDSs (total)                      :: 5,418
            Genes (coding)                    :: 5,171
            CDSs (with protein)               :: 5,171
            Genes (RNA)                       :: 102
            rRNAs                             :: 6, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 4, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 247
            CDSs (without protein)            :: 247
            Pseudo Genes (ambiguous residues) :: 0 of 247
            Pseudo Genes (frameshifted)       :: 77 of 247
            Pseudo Genes (incomplete)         :: 175 of 247
            Pseudo Genes (internal stop)      :: 33 of 247
            Pseudo Genes (multiple problems)  :: 36 of 247
            Pseudo Genes (short protein)      :: 1 of 247
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5472364
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="264 E2"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2020-08-24"
WGS         JBJLYX010000001-JBJLYX010000152
WGS_SCAFLD  NZ_JBJLYX010000001-NZ_JBJLYX010000152
//
LOCUS       NZ_JBJLYQ010000000   4817597 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 252 E4, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLYQ000000000
VERSION     NZ_JBJLYQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114968
            Assembly: GCF_045800335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4817597)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLYQ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLYQ000000000.  This version of the project
            (01) has the accession number NZ_JBJLYQ010000000, and consists of
            sequences JBJLYQ010000001-JBJLYQ010000129.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800335.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:50:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,768
            CDSs (total)                      :: 4,668
            Genes (coding)                    :: 4,483
            CDSs (with protein)               :: 4,483
            Genes (RNA)                       :: 100
            rRNAs                             :: 6, 4, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 4, 5 (5S, 16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 185
            CDSs (without protein)            :: 185
            Pseudo Genes (ambiguous residues) :: 0 of 185
            Pseudo Genes (frameshifted)       :: 57 of 185
            Pseudo Genes (incomplete)         :: 135 of 185
            Pseudo Genes (internal stop)      :: 28 of 185
            Pseudo Genes (multiple problems)  :: 32 of 185
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4817597
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="252 E4"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2020-03-21"
WGS         JBJLYQ010000001-JBJLYQ010000129
WGS_SCAFLD  NZ_JBJLYQ010000001-NZ_JBJLYQ010000129
//
LOCUS       NZ_JBIHLB010000000   5260461 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E687, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHLB000000000
VERSION     NZ_JBIHLB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235062
            Assembly: GCF_045611365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5260461)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHLB000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHLB000000000.  This version of the project
            (01) has the accession number NZ_JBIHLB010000000, and consists of
            sequences JBIHLB010000001-JBIHLB010000014.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 304x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045611365.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:10:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,186
            CDSs (total)                      :: 5,072
            Genes (coding)                    :: 4,762
            CDSs (with protein)               :: 4,762
            Genes (RNA)                       :: 114
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 310
            CDSs (without protein)            :: 310
            Pseudo Genes (ambiguous residues) :: 0 of 310
            Pseudo Genes (frameshifted)       :: 196 of 310
            Pseudo Genes (incomplete)         :: 123 of 310
            Pseudo Genes (internal stop)      :: 36 of 310
            Pseudo Genes (multiple problems)  :: 42 of 310
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5260461
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E687"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHLB010000001-JBIHLB010000014
WGS_SCAFLD  NZ_JBIHLB010000001-NZ_JBIHLB010000014
//
LOCUS       NZ_JBGMPG010000000   5114873 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-D06-PYO-326, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMPG000000000
VERSION     NZ_JBGMPG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076769
            Assembly: GCF_045797395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5114873)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5114873)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMPG000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMPG000000000.  This version of the project
            (01) has the accession number NZ_JBGMPG010000000, and consists of
            sequences JBGMPG010000001-JBGMPG010000167.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 15-OCT-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 104x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797395.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:12:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,068
            CDSs (total)                      :: 4,979
            Genes (coding)                    :: 4,695
            CDSs (with protein)               :: 4,695
            Genes (RNA)                       :: 89
            rRNAs                             :: 3, 1, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 1, 4 (5S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 284
            CDSs (without protein)            :: 284
            Pseudo Genes (ambiguous residues) :: 1 of 284
            Pseudo Genes (frameshifted)       :: 105 of 284
            Pseudo Genes (incomplete)         :: 218 of 284
            Pseudo Genes (internal stop)      :: 43 of 284
            Pseudo Genes (multiple problems)  :: 75 of 284
            Pseudo Genes (short protein)      :: 1 of 284
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5114873
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-D06-PYO-326"
                     /isolation_source="Uterus"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2023-01-05"
WGS         JBGMPG010000001-JBGMPG010000167
WGS_SCAFLD  NZ_JBGMPG010000001-NZ_JBGMPG010000167
//
LOCUS       NZ_JBGMPR010000000   5206822 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-C01-PYO-13, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMPR000000000
VERSION     NZ_JBGMPR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076758
            Assembly: GCF_045797605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5206822)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5206822)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMPR000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMPR000000000.  This version of the project
            (01) has the accession number NZ_JBGMPR010000000, and consists of
            sequences JBGMPR010000001-JBGMPR010000169.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-OCT-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 84x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797605.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:17:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,188
            CDSs (total)                      :: 5,078
            Genes (coding)                    :: 4,783
            CDSs (with protein)               :: 4,783
            Genes (RNA)                       :: 110
            rRNAs                             :: 5, 10, 10 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 4, 10, 10 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 295
            CDSs (without protein)            :: 295
            Pseudo Genes (ambiguous residues) :: 0 of 295
            Pseudo Genes (frameshifted)       :: 116 of 295
            Pseudo Genes (incomplete)         :: 224 of 295
            Pseudo Genes (internal stop)      :: 51 of 295
            Pseudo Genes (multiple problems)  :: 85 of 295
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5206822
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-C01-PYO-13"
                     /isolation_source="urine"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2019-09-05"
WGS         JBGMPR010000001-JBGMPR010000169
WGS_SCAFLD  NZ_JBGMPR010000001-NZ_JBGMPR010000169
//
LOCUS       NZ_JBIWZJ010000000   4886044 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1222, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIWZJ000000000
VERSION     NZ_JBIWZJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247370
            Assembly: GCF_045618585.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4886044)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIWZJ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIWZJ000000000.  This version of the project
            (01) has the accession number NZ_JBIWZJ010000000, and consists of
            sequences JBIWZJ010000001-JBIWZJ010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 224x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045618585.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:18:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,733
            CDSs (total)                      :: 4,618
            Genes (coding)                    :: 4,422
            CDSs (with protein)               :: 4,422
            Genes (RNA)                       :: 115
            rRNAs                             :: 7, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 7, 6 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 85
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 196
            CDSs (without protein)            :: 196
            Pseudo Genes (ambiguous residues) :: 0 of 196
            Pseudo Genes (frameshifted)       :: 120 of 196
            Pseudo Genes (incomplete)         :: 72 of 196
            Pseudo Genes (internal stop)      :: 28 of 196
            Pseudo Genes (multiple problems)  :: 21 of 196
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4886044
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1222"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIWZJ010000001-JBIWZJ010000004
WGS_SCAFLD  NZ_JBIWZJ010000001-NZ_JBIWZJ010000004
//
LOCUS       NZ_JARTZG010000000   5008494 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 511421-22, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JARTZG000000000
VERSION     NZ_JARTZG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34004165
            Assembly: GCF_045795845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5008494)
  AUTHORS   Irimaso,E., Keinprecht,H., Szostak,M.P., Cabal Rosel,A., Stessl,B.,
            Desvars-Larrive,A., Ntakirutimana,C., Masengesho,G., Fischer,O.W.,
            Wittek,T., Mueller,E., Fessler,A.T., Braun,S.F., Schwarz,S.,
            Monecke,S., Ehricht,R., Spergser,J., Ruppitsch,W. and Loncaric,I.
  TITLE     Presence of broad-spectrum cephalosporin-resistant Enterobacterales
            isolated from ruminants in Rwanda
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5008494)
  AUTHORS   Szostak,M.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-MAR-2023) Department of Pathobiology, Institute of
            Microbiology, Veterinary University Vienna, Veterinaerplatz 1,
            Vienna 1210, Austria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARTZG000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JARTZG000000000.  This version of the project
            (01) has the accession number NZ_JARTZG010000000, and consists of
            sequences JARTZG010000001-JARTZG010000435.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 47x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795845.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:53:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,134
            CDSs (total)                      :: 5,041
            Genes (coding)                    :: 4,739
            CDSs (with protein)               :: 4,739
            Genes (RNA)                       :: 93
            rRNAs                             :: 2, 3, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 3, 7 (16S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 302
            CDSs (without protein)            :: 302
            Pseudo Genes (ambiguous residues) :: 0 of 302
            Pseudo Genes (frameshifted)       :: 79 of 302
            Pseudo Genes (incomplete)         :: 219 of 302
            Pseudo Genes (internal stop)      :: 45 of 302
            Pseudo Genes (multiple problems)  :: 36 of 302
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5008494
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="511421-22"
                     /host="goat"
                     /db_xref="taxon:562"
                     /geo_loc_name="Rwanda: Musanze"
                     /collection_date="2021"
                     /collected_by="Helga Keinprecht"
WGS         JARTZG010000001-JARTZG010000435
WGS_SCAFLD  NZ_JARTZG010000001-NZ_JARTZG010000435
//
LOCUS       NZ_JBJLYK010000000   4987197 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 246 B8, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLYK000000000
VERSION     NZ_JBJLYK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114962
            Assembly: GCF_045799025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4987197)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLYK000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLYK000000000.  This version of the project
            (01) has the accession number NZ_JBJLYK010000000, and consists of
            sequences JBJLYK010000001-JBJLYK010000121.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799025.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:32:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,967
            CDSs (total)                      :: 4,864
            Genes (coding)                    :: 4,621
            CDSs (with protein)               :: 4,621
            Genes (RNA)                       :: 103
            rRNAs                             :: 6, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 80
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 243
            CDSs (without protein)            :: 243
            Pseudo Genes (ambiguous residues) :: 0 of 243
            Pseudo Genes (frameshifted)       :: 76 of 243
            Pseudo Genes (incomplete)         :: 167 of 243
            Pseudo Genes (internal stop)      :: 46 of 243
            Pseudo Genes (multiple problems)  :: 41 of 243
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4987197
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="246 B8"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2020-01-24"
WGS         JBJLYK010000001-JBJLYK010000121
WGS_SCAFLD  NZ_JBJLYK010000001-NZ_JBJLYK010000121
//
LOCUS       NZ_JBIXAR010000000   5175511 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1182, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXAR000000000
VERSION     NZ_JBIXAR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247336
            Assembly: GCF_045619185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5175511)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXAR000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXAR000000000.  This version of the project
            (01) has the accession number NZ_JBIXAR010000000, and consists of
            sequences JBIXAR010000001-JBIXAR010000023.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 85x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045619185.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:09:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,142
            CDSs (total)                      :: 5,041
            Genes (coding)                    :: 4,709
            CDSs (with protein)               :: 4,709
            Genes (RNA)                       :: 101
            rRNAs                             :: 6, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 80
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 332
            CDSs (without protein)            :: 332
            Pseudo Genes (ambiguous residues) :: 0 of 332
            Pseudo Genes (frameshifted)       :: 172 of 332
            Pseudo Genes (incomplete)         :: 190 of 332
            Pseudo Genes (internal stop)      :: 49 of 332
            Pseudo Genes (multiple problems)  :: 69 of 332
            Pseudo Genes (short protein)      :: 1 of 332
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5175511
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1182"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXAR010000001-JBIXAR010000023
WGS_SCAFLD  NZ_JBIXAR010000001-NZ_JBIXAR010000023
//
LOCUS       NZ_JBGMOP010000000   4735571 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-H01-PYO-48, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMOP000000000
VERSION     NZ_JBGMOP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076786
            Assembly: GCF_045796925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4735571)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4735571)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMOP000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMOP000000000.  This version of the project
            (01) has the accession number NZ_JBGMOP010000000, and consists of
            sequences JBGMOP010000001-JBGMOP010000042.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 01-NOV-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 114x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045796925.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:58:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,587
            CDSs (total)                      :: 4,498
            Genes (coding)                    :: 4,354
            CDSs (with protein)               :: 4,354
            Genes (RNA)                       :: 89
            rRNAs                             :: 2, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 144
            CDSs (without protein)            :: 144
            Pseudo Genes (ambiguous residues) :: 1 of 144
            Pseudo Genes (frameshifted)       :: 54 of 144
            Pseudo Genes (incomplete)         :: 97 of 144
            Pseudo Genes (internal stop)      :: 28 of 144
            Pseudo Genes (multiple problems)  :: 34 of 144
            Pseudo Genes (short protein)      :: 1 of 144
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4735571
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-H01-PYO-48"
                     /isolation_source="Uterus"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2020-01-12"
WGS         JBGMOP010000001-JBGMOP010000042
WGS_SCAFLD  NZ_JBGMOP010000001-NZ_JBGMOP010000042
//
LOCUS       NZ_JBIXDD010000000   4791945 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1109, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXDD000000000
VERSION     NZ_JBIXDD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247272
            Assembly: GCF_045620545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4791945)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXDD000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXDD000000000.  This version of the project
            (01) has the accession number NZ_JBIXDD010000000, and consists of
            sequences JBIXDD010000001-JBIXDD010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 436x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045620545.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:25:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,630
            CDSs (total)                      :: 4,513
            Genes (coding)                    :: 4,322
            CDSs (with protein)               :: 4,322
            Genes (RNA)                       :: 117
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 191
            CDSs (without protein)            :: 191
            Pseudo Genes (ambiguous residues) :: 0 of 191
            Pseudo Genes (frameshifted)       :: 94 of 191
            Pseudo Genes (incomplete)         :: 90 of 191
            Pseudo Genes (internal stop)      :: 35 of 191
            Pseudo Genes (multiple problems)  :: 28 of 191
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4791945
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1109"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXDD010000001-JBIXDD010000004
WGS_SCAFLD  NZ_JBIXDD010000001-NZ_JBIXDD010000004
//
LOCUS       NZ_JBJLXM010000000   5091782 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 168 C10, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLXM000000000
VERSION     NZ_JBJLXM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114935
            Assembly: GCF_045799305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5091782)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLXM000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLXM000000000.  This version of the project
            (01) has the accession number NZ_JBJLXM010000000, and consists of
            sequences JBJLXM010000001-JBJLXM010000163.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799305.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:27:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,115
            CDSs (total)                      :: 5,032
            Genes (coding)                    :: 4,811
            CDSs (with protein)               :: 4,811
            Genes (RNA)                       :: 83
            rRNAs                             :: 7, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 5, 1, 4 (5S, 16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 221
            CDSs (without protein)            :: 221
            Pseudo Genes (ambiguous residues) :: 0 of 221
            Pseudo Genes (frameshifted)       :: 59 of 221
            Pseudo Genes (incomplete)         :: 164 of 221
            Pseudo Genes (internal stop)      :: 33 of 221
            Pseudo Genes (multiple problems)  :: 34 of 221
            Pseudo Genes (short protein)      :: 1 of 221
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5091782
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="168 C10"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2018-03-27"
WGS         JBJLXM010000001-JBJLXM010000163
WGS_SCAFLD  NZ_JBJLXM010000001-NZ_JBJLXM010000163
//
LOCUS       NZ_JBJLZG010000000   4933013 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 268 C3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLZG000000000
VERSION     NZ_JBJLZG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114984
            Assembly: GCF_045799565.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4933013)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLZG000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLZG000000000.  This version of the project
            (01) has the accession number NZ_JBJLZG010000000, and consists of
            sequences JBJLZG010000001-JBJLZG010000149.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799565.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:35:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,910
            CDSs (total)                      :: 4,807
            Genes (coding)                    :: 4,524
            CDSs (with protein)               :: 4,524
            Genes (RNA)                       :: 103
            rRNAs                             :: 6, 4, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 4, 3, 5 (5S, 16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 283
            CDSs (without protein)            :: 283
            Pseudo Genes (ambiguous residues) :: 0 of 283
            Pseudo Genes (frameshifted)       :: 92 of 283
            Pseudo Genes (incomplete)         :: 194 of 283
            Pseudo Genes (internal stop)      :: 49 of 283
            Pseudo Genes (multiple problems)  :: 44 of 283
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4933013
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="268 C3"
                     /isolation_source="Urines (Infection)"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2019-02-16"
WGS         JBJLZG010000001-JBJLZG010000149
WGS_SCAFLD  NZ_JBJLZG010000001-NZ_JBJLZG010000149
//
LOCUS       NZ_JBJLZB010000000   4907919 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 268 B7, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLZB000000000
VERSION     NZ_JBJLZB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114979
            Assembly: GCF_045799965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4907919)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLZB000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLZB000000000.  This version of the project
            (01) has the accession number NZ_JBJLZB010000000, and consists of
            sequences JBJLZB010000001-JBJLZB010000150.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799965.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:50:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,931
            CDSs (total)                      :: 4,828
            Genes (coding)                    :: 4,561
            CDSs (with protein)               :: 4,561
            Genes (RNA)                       :: 103
            rRNAs                             :: 5, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 3, 1, 4 (5S, 16S, 23S)
            tRNAs                             :: 80
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 75 of 267
            Pseudo Genes (incomplete)         :: 186 of 267
            Pseudo Genes (internal stop)      :: 46 of 267
            Pseudo Genes (multiple problems)  :: 37 of 267
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4907919
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="268 B7"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2018-11-23"
WGS         JBJLZB010000001-JBJLZB010000150
WGS_SCAFLD  NZ_JBJLZB010000001-NZ_JBJLZB010000150
//
LOCUS       NZ_JBGMPD010000000   4859150 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-E03-PYO-132, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMPD000000000
VERSION     NZ_JBGMPD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076772
            Assembly: GCF_045797295.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4859150)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4859150)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMPD000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMPD000000000.  This version of the project
            (01) has the accession number NZ_JBGMPD010000000, and consists of
            sequences JBGMPD010000001-JBGMPD010000063.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 18-OCT-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 106x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797295.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:10:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,732
            CDSs (total)                      :: 4,636
            Genes (coding)                    :: 4,521
            CDSs (with protein)               :: 4,521
            Genes (RNA)                       :: 96
            rRNAs                             :: 8, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 6, 3 (5S, 16S)
            tRNAs                             :: 78
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 115
            CDSs (without protein)            :: 115
            Pseudo Genes (ambiguous residues) :: 0 of 115
            Pseudo Genes (frameshifted)       :: 41 of 115
            Pseudo Genes (incomplete)         :: 80 of 115
            Pseudo Genes (internal stop)      :: 17 of 115
            Pseudo Genes (multiple problems)  :: 22 of 115
            Pseudo Genes (short protein)      :: 2 of 115
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4859150
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-E03-PYO-132"
                     /isolation_source="urine"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2020-09-28"
WGS         JBGMPD010000001-JBGMPD010000063
WGS_SCAFLD  NZ_JBGMPD010000001-NZ_JBGMPD010000063
//
LOCUS       NZ_JBIXFI010000000   5435173 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1044, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXFI000000000
VERSION     NZ_JBIXFI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247215
            Assembly: GCF_045621685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5435173)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXFI000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXFI000000000.  This version of the project
            (01) has the accession number NZ_JBIXFI010000000, and consists of
            sequences JBIXFI010000001-JBIXFI010000029.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 73x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045621685.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:28:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,501
            CDSs (total)                      :: 5,384
            Genes (coding)                    :: 4,976
            CDSs (with protein)               :: 4,976
            Genes (RNA)                       :: 117
            rRNAs                             :: 7, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 7, 6 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 88
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 408
            CDSs (without protein)            :: 408
            Pseudo Genes (ambiguous residues) :: 0 of 408
            Pseudo Genes (frameshifted)       :: 261 of 408
            Pseudo Genes (incomplete)         :: 168 of 408
            Pseudo Genes (internal stop)      :: 56 of 408
            Pseudo Genes (multiple problems)  :: 68 of 408
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5435173
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1044"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXFI010000001-JBIXFI010000029
WGS_SCAFLD  NZ_JBIXFI010000001-NZ_JBIXFI010000029
//
LOCUS       NZ_JBJLYE010000000   4935386 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 239 D2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLYE000000000
VERSION     NZ_JBJLYE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114956
            Assembly: GCF_045800285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4935386)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLYE000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLYE000000000.  This version of the project
            (01) has the accession number NZ_JBJLYE010000000, and consists of
            sequences JBJLYE010000001-JBJLYE010000147.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800285.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:48:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,896
            CDSs (total)                      :: 4,797
            Genes (coding)                    :: 4,556
            CDSs (with protein)               :: 4,556
            Genes (RNA)                       :: 99
            rRNAs                             :: 5, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 3, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 241
            CDSs (without protein)            :: 241
            Pseudo Genes (ambiguous residues) :: 0 of 241
            Pseudo Genes (frameshifted)       :: 82 of 241
            Pseudo Genes (incomplete)         :: 161 of 241
            Pseudo Genes (internal stop)      :: 48 of 241
            Pseudo Genes (multiple problems)  :: 45 of 241
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4935386
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="239 D2"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2019-11-16"
WGS         JBJLYE010000001-JBJLYE010000147
WGS_SCAFLD  NZ_JBJLYE010000001-NZ_JBJLYE010000147
//
LOCUS       NZ_JADOEB010000000   5081931 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 20-AB00922-0, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JADOEB000000000
VERSION     NZ_JADOEB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN16793111
            Assembly: GCF_045748405.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5081931)
  AUTHORS   Hammerl,J.A.
  TITLE     Genome sequences of Escherichia coli from livestock and food
            involved in the development of emerging clonal lineages in humans
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5081931)
  AUTHORS   Hammerl,J.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-NOV-2020) Biological Safety, German Federal Institute
            for Risk Assessment, Diedersdorfer Weg 1, Berlin 12277, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JADOEB000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JADOEB000000000.  This version of the project
            (01) has the accession number NZ_JADOEB010000000, and consists of
            sequences JADOEB010000001-JADOEB010000084.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from German Federal Institute for
            Risk Assessment.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.6.7
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 75.0x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045748405.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:41:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,981
            CDSs (total)                      :: 4,900
            Genes (coding)                    :: 4,695
            CDSs (with protein)               :: 4,695
            Genes (RNA)                       :: 81
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 72
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 205
            CDSs (without protein)            :: 205
            Pseudo Genes (ambiguous residues) :: 0 of 205
            Pseudo Genes (frameshifted)       :: 82 of 205
            Pseudo Genes (incomplete)         :: 144 of 205
            Pseudo Genes (internal stop)      :: 39 of 205
            Pseudo Genes (multiple problems)  :: 50 of 205
            Pseudo Genes (short protein)      :: 1 of 205
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5081931
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="20-AB00922-0"
                     /isolation_source="chicken"
                     /db_xref="taxon:562"
                     /geo_loc_name="Germany"
                     /collection_date="2020"
                     /collected_by="German Federal Institute for Risk
                     Assessment"
WGS         JADOEB010000001-JADOEB010000084
WGS_SCAFLD  NZ_JADOEB010000001-NZ_JADOEB010000084
//
LOCUS       NZ_JBGMQA010000000   5067834 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-A04-PYO-222, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMQA000000000
VERSION     NZ_JBGMQA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076749
            Assembly: GCF_045797705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5067834)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5067834)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMQA000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMQA000000000.  This version of the project
            (01) has the accession number NZ_JBGMQA010000000, and consists of
            sequences JBGMQA010000001-JBGMQA010000112.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 25-SEP-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 101x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797705.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:21:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,998
            CDSs (total)                      :: 4,906
            Genes (coding)                    :: 4,662
            CDSs (with protein)               :: 4,662
            Genes (RNA)                       :: 92
            rRNAs                             :: 5, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 2 (5S, 16S)
            tRNAs                             :: 77
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 244
            CDSs (without protein)            :: 244
            Pseudo Genes (ambiguous residues) :: 0 of 244
            Pseudo Genes (frameshifted)       :: 92 of 244
            Pseudo Genes (incomplete)         :: 174 of 244
            Pseudo Genes (internal stop)      :: 42 of 244
            Pseudo Genes (multiple problems)  :: 55 of 244
            Pseudo Genes (short protein)      :: 1 of 244
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5067834
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-A04-PYO-222"
                     /isolation_source="Uterus"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2021-05-10"
WGS         JBGMQA010000001-JBGMQA010000112
WGS_SCAFLD  NZ_JBGMQA010000001-NZ_JBGMQA010000112
//
LOCUS       NZ_JBIGZJ010000000   4713009 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E477, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIGZJ000000000
VERSION     NZ_JBIGZJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235473
            Assembly: GCF_045583665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4713009)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGZJ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIGZJ000000000.  This version of the project
            (01) has the accession number NZ_JBIGZJ010000000, and consists of
            sequences JBIGZJ010000001-JBIGZJ010000002.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 224x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045583665.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:42:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,588
            CDSs (total)                      :: 4,475
            Genes (coding)                    :: 4,304
            CDSs (with protein)               :: 4,304
            Genes (RNA)                       :: 113
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 171
            CDSs (without protein)            :: 171
            Pseudo Genes (ambiguous residues) :: 0 of 171
            Pseudo Genes (frameshifted)       :: 92 of 171
            Pseudo Genes (incomplete)         :: 86 of 171
            Pseudo Genes (internal stop)      :: 22 of 171
            Pseudo Genes (multiple problems)  :: 26 of 171
            Pseudo Genes (short protein)      :: 1 of 171
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4713009
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E477"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIGZJ010000001-JBIGZJ010000002
WGS_SCAFLD  NZ_JBIGZJ010000001-NZ_JBIGZJ010000002
//
LOCUS       NZ_JBIHBG010000000   5069888 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E397, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHBG000000000
VERSION     NZ_JBIHBG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235401
            Assembly: GCF_045585155.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5069888)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHBG000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHBG000000000.  This version of the project
            (01) has the accession number NZ_JBIHBG010000000, and consists of
            sequences JBIHBG010000001-JBIHBG010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 382x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045585155.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:54:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,072
            CDSs (total)                      :: 4,954
            Genes (coding)                    :: 4,614
            CDSs (with protein)               :: 4,614
            Genes (RNA)                       :: 118
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 340
            CDSs (without protein)            :: 340
            Pseudo Genes (ambiguous residues) :: 0 of 340
            Pseudo Genes (frameshifted)       :: 158 of 340
            Pseudo Genes (incomplete)         :: 185 of 340
            Pseudo Genes (internal stop)      :: 50 of 340
            Pseudo Genes (multiple problems)  :: 51 of 340
            Pseudo Genes (short protein)      :: 1 of 340
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5069888
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E397"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHBG010000001-JBIHBG010000008
WGS_SCAFLD  NZ_JBIHBG010000001-NZ_JBIHBG010000008
//
LOCUS       NZ_JBGMOL010000000   5118585 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-H05-PYO-318, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMOL000000000
VERSION     NZ_JBGMOL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076790
            Assembly: GCF_045796685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5118585)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5118585)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMOL000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMOL000000000.  This version of the project
            (01) has the accession number NZ_JBGMOL010000000, and consists of
            sequences JBGMOL010000001-JBGMOL010000108.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 05-NOV-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 103x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045796685.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:55:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,076
            CDSs (total)                      :: 4,985
            Genes (coding)                    :: 4,745
            CDSs (with protein)               :: 4,745
            Genes (RNA)                       :: 91
            rRNAs                             :: 3, 5, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 5, 2 (5S, 16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 240
            CDSs (without protein)            :: 240
            Pseudo Genes (ambiguous residues) :: 1 of 240
            Pseudo Genes (frameshifted)       :: 98 of 240
            Pseudo Genes (incomplete)         :: 176 of 240
            Pseudo Genes (internal stop)      :: 41 of 240
            Pseudo Genes (multiple problems)  :: 70 of 240
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5118585
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-H05-PYO-318"
                     /isolation_source="Uterus"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2022-11-15"
WGS         JBGMOL010000001-JBGMOL010000108
WGS_SCAFLD  NZ_JBGMOL010000001-NZ_JBGMOL010000108
//
LOCUS       NZ_JBGMPS010000000   5119796 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-B06-PYO-322, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMPS000000000
VERSION     NZ_JBGMPS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076757
            Assembly: GCF_045797595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5119796)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5119796)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMPS000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMPS000000000.  This version of the project
            (01) has the accession number NZ_JBGMPS010000000, and consists of
            sequences JBGMPS010000001-JBGMPS010000118.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-OCT-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 102x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797595.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:05:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,092
            CDSs (total)                      :: 4,993
            Genes (coding)                    :: 4,753
            CDSs (with protein)               :: 4,753
            Genes (RNA)                       :: 99
            rRNAs                             :: 6, 7, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 7, 2 (5S, 16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 240
            CDSs (without protein)            :: 240
            Pseudo Genes (ambiguous residues) :: 2 of 240
            Pseudo Genes (frameshifted)       :: 98 of 240
            Pseudo Genes (incomplete)         :: 174 of 240
            Pseudo Genes (internal stop)      :: 41 of 240
            Pseudo Genes (multiple problems)  :: 69 of 240
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5119796
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-B06-PYO-322"
                     /isolation_source="urine"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2022-11-29"
WGS         JBGMPS010000001-JBGMPS010000118
WGS_SCAFLD  NZ_JBGMPS010000001-NZ_JBGMPS010000118
//
LOCUS       NZ_JBIHDH010000000   5209378 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1007, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHDH000000000
VERSION     NZ_JBIHDH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235330
            Assembly: GCF_045607265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5209378)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHDH000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHDH000000000.  This version of the project
            (01) has the accession number NZ_JBIHDH010000000, and consists of
            sequences JBIHDH010000001-JBIHDH010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 233x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045607265.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:01:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,066
            CDSs (total)                      :: 4,946
            Genes (coding)                    :: 4,651
            CDSs (with protein)               :: 4,651
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 90
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 295
            CDSs (without protein)            :: 295
            Pseudo Genes (ambiguous residues) :: 0 of 295
            Pseudo Genes (frameshifted)       :: 133 of 295
            Pseudo Genes (incomplete)         :: 170 of 295
            Pseudo Genes (internal stop)      :: 31 of 295
            Pseudo Genes (multiple problems)  :: 35 of 295
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5209378
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1007"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHDH010000001-JBIHDH010000006
WGS_SCAFLD  NZ_JBIHDH010000001-NZ_JBIHDH010000006
//
LOCUS       NZ_JBIHDA010000000   5318373 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1018, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHDA000000000
VERSION     NZ_JBIHDA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235339
            Assembly: GCF_045607145.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5318373)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHDA000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHDA000000000.  This version of the project
            (01) has the accession number NZ_JBIHDA010000000, and consists of
            sequences JBIHDA010000001-JBIHDA010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 205x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045607145.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:52:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,270
            CDSs (total)                      :: 5,149
            Genes (coding)                    :: 4,900
            CDSs (with protein)               :: 4,900
            Genes (RNA)                       :: 121
            rRNAs                             :: 8, 8, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 249
            CDSs (without protein)            :: 249
            Pseudo Genes (ambiguous residues) :: 0 of 249
            Pseudo Genes (frameshifted)       :: 154 of 249
            Pseudo Genes (incomplete)         :: 107 of 249
            Pseudo Genes (internal stop)      :: 27 of 249
            Pseudo Genes (multiple problems)  :: 36 of 249
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5318373
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1018"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHDA010000001-JBIHDA010000007
WGS_SCAFLD  NZ_JBIHDA010000001-NZ_JBIHDA010000007
//
LOCUS       NZ_JARTZO010000000   4854473 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 511413-22, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JARTZO000000000
VERSION     NZ_JARTZO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34004157
            Assembly: GCF_045796105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4854473)
  AUTHORS   Irimaso,E., Keinprecht,H., Szostak,M.P., Cabal Rosel,A., Stessl,B.,
            Desvars-Larrive,A., Ntakirutimana,C., Masengesho,G., Fischer,O.W.,
            Wittek,T., Mueller,E., Fessler,A.T., Braun,S.F., Schwarz,S.,
            Monecke,S., Ehricht,R., Spergser,J., Ruppitsch,W. and Loncaric,I.
  TITLE     Presence of broad-spectrum cephalosporin-resistant Enterobacterales
            isolated from ruminants in Rwanda
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4854473)
  AUTHORS   Szostak,M.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-MAR-2023) Department of Pathobiology, Institute of
            Microbiology, Veterinary University Vienna, Veterinaerplatz 1,
            Vienna 1210, Austria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARTZO000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JARTZO000000000.  This version of the project
            (01) has the accession number NZ_JARTZO010000000, and consists of
            sequences JARTZO010000001-JARTZO010000334.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 45x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045796105.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:52:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,824
            CDSs (total)                      :: 4,731
            Genes (coding)                    :: 4,499
            CDSs (with protein)               :: 4,499
            Genes (RNA)                       :: 93
            rRNAs                             :: 4, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 15
            Pseudo Genes (total)              :: 232
            CDSs (without protein)            :: 232
            Pseudo Genes (ambiguous residues) :: 0 of 232
            Pseudo Genes (frameshifted)       :: 63 of 232
            Pseudo Genes (incomplete)         :: 166 of 232
            Pseudo Genes (internal stop)      :: 36 of 232
            Pseudo Genes (multiple problems)  :: 31 of 232
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4854473
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="511413-22"
                     /host="cattle"
                     /db_xref="taxon:562"
                     /geo_loc_name="Rwanda: Musanze"
                     /collection_date="2021"
                     /collected_by="Helga Keinprecht"
WGS         JARTZO010000001-JARTZO010000334
WGS_SCAFLD  NZ_JARTZO010000001-NZ_JARTZO010000334
//
LOCUS       NZ_JBIHED010000000   4962027 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E975, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHED000000000
VERSION     NZ_JBIHED000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235302
            Assembly: GCF_045607745.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4962027)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHED000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHED000000000.  This version of the project
            (01) has the accession number NZ_JBIHED010000000, and consists of
            sequences JBIHED010000001-JBIHED010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 147x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045607745.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:16:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,778
            CDSs (total)                      :: 4,661
            Genes (coding)                    :: 4,532
            CDSs (with protein)               :: 4,532
            Genes (RNA)                       :: 117
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 129
            CDSs (without protein)            :: 129
            Pseudo Genes (ambiguous residues) :: 0 of 129
            Pseudo Genes (frameshifted)       :: 65 of 129
            Pseudo Genes (incomplete)         :: 65 of 129
            Pseudo Genes (internal stop)      :: 10 of 129
            Pseudo Genes (multiple problems)  :: 11 of 129
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4962027
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E975"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHED010000001-JBIHED010000004
WGS_SCAFLD  NZ_JBIHED010000001-NZ_JBIHED010000004
//
LOCUS       NZ_JARUAH010000000   4936064 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 511394-22, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JARUAH000000000
VERSION     NZ_JARUAH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34004138
            Assembly: GCF_045796665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4936064)
  AUTHORS   Irimaso,E., Keinprecht,H., Szostak,M.P., Cabal Rosel,A., Stessl,B.,
            Desvars-Larrive,A., Ntakirutimana,C., Masengesho,G., Fischer,O.W.,
            Wittek,T., Mueller,E., Fessler,A.T., Braun,S.F., Schwarz,S.,
            Monecke,S., Ehricht,R., Spergser,J., Ruppitsch,W. and Loncaric,I.
  TITLE     Presence of broad-spectrum cephalosporin-resistant Enterobacterales
            isolated from ruminants in Rwanda
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4936064)
  AUTHORS   Szostak,M.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-MAR-2023) Department of Pathobiology, Institute of
            Microbiology, Veterinary University Vienna, Veterinaerplatz 1,
            Vienna 1210, Austria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARUAH000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JARUAH000000000.  This version of the project
            (01) has the accession number NZ_JARUAH010000000, and consists of
            sequences JARUAH010000001-JARUAH010000192.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 44x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045796665.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:56:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,870
            CDSs (total)                      :: 4,772
            Genes (coding)                    :: 4,627
            CDSs (with protein)               :: 4,627
            Genes (RNA)                       :: 98
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 28 of 145
            Pseudo Genes (incomplete)         :: 110 of 145
            Pseudo Genes (internal stop)      :: 23 of 145
            Pseudo Genes (multiple problems)  :: 14 of 145
            Pseudo Genes (short protein)      :: 1 of 145
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4936064
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="511394-22"
                     /host="cattle"
                     /db_xref="taxon:562"
                     /geo_loc_name="Rwanda: Musanze"
                     /collection_date="2021"
                     /collected_by="Helga Keinprecht"
WGS         JARUAH010000001-JARUAH010000192
WGS_SCAFLD  NZ_JARUAH010000001-NZ_JARUAH010000192
//
LOCUS       NZ_JBJLXN010000000   5131391 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 169 H4, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLXN000000000
VERSION     NZ_JBJLXN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114936
            Assembly: GCF_045799255.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5131391)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLXN000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLXN000000000.  This version of the project
            (01) has the accession number NZ_JBJLXN010000000, and consists of
            sequences JBJLXN010000001-JBJLXN010000164.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799255.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:21:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,180
            CDSs (total)                      :: 5,087
            Genes (coding)                    :: 4,845
            CDSs (with protein)               :: 4,845
            Genes (RNA)                       :: 93
            rRNAs                             :: 7, 4, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 5, 4, 5 (5S, 16S, 23S)
            tRNAs                             :: 67
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 242
            CDSs (without protein)            :: 242
            Pseudo Genes (ambiguous residues) :: 0 of 242
            Pseudo Genes (frameshifted)       :: 76 of 242
            Pseudo Genes (incomplete)         :: 169 of 242
            Pseudo Genes (internal stop)      :: 42 of 242
            Pseudo Genes (multiple problems)  :: 40 of 242
            Pseudo Genes (short protein)      :: 1 of 242
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5131391
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="169 H4"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2018-04-08"
WGS         JBJLXN010000001-JBJLXN010000164
WGS_SCAFLD  NZ_JBJLXN010000001-NZ_JBJLXN010000164
//
LOCUS       NZ_JBIHGE010000000   5461211 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E884, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHGE000000000
VERSION     NZ_JBIHGE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235226
            Assembly: GCF_045608825.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5461211)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHGE000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHGE000000000.  This version of the project
            (01) has the accession number NZ_JBIHGE010000000, and consists of
            sequences JBIHGE010000001-JBIHGE010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 368x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045608825.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:06:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,472
            CDSs (total)                      :: 5,361
            Genes (coding)                    :: 4,974
            CDSs (with protein)               :: 4,974
            Genes (RNA)                       :: 111
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 387
            CDSs (without protein)            :: 387
            Pseudo Genes (ambiguous residues) :: 0 of 387
            Pseudo Genes (frameshifted)       :: 222 of 387
            Pseudo Genes (incomplete)         :: 207 of 387
            Pseudo Genes (internal stop)      :: 46 of 387
            Pseudo Genes (multiple problems)  :: 76 of 387
            Pseudo Genes (short protein)      :: 1 of 387
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5461211
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E884"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHGE010000001-JBIHGE010000004
WGS_SCAFLD  NZ_JBIHGE010000001-NZ_JBIHGE010000004
//
LOCUS       NZ_JBGMOQ010000000   4821180 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-G05-PYO-297, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMOQ000000000
VERSION     NZ_JBGMOQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076785
            Assembly: GCF_045796905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4821180)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4821180)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMOQ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMOQ000000000.  This version of the project
            (01) has the accession number NZ_JBGMOQ010000000, and consists of
            sequences JBGMOQ010000001-JBGMOQ010000080.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 31-OCT-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 109x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045796905.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:07:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,746
            CDSs (total)                      :: 4,642
            Genes (coding)                    :: 4,459
            CDSs (with protein)               :: 4,459
            Genes (RNA)                       :: 104
            rRNAs                             :: 6, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 2, 4, 2 (5S, 16S, 23S)
            tRNAs                             :: 81
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 183
            CDSs (without protein)            :: 183
            Pseudo Genes (ambiguous residues) :: 0 of 183
            Pseudo Genes (frameshifted)       :: 71 of 183
            Pseudo Genes (incomplete)         :: 111 of 183
            Pseudo Genes (internal stop)      :: 37 of 183
            Pseudo Genes (multiple problems)  :: 31 of 183
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4821180
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-G05-PYO-297"
                     /isolation_source="urine"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2022-07-13"
WGS         JBGMOQ010000001-JBGMOQ010000080
WGS_SCAFLD  NZ_JBGMOQ010000001-NZ_JBGMOQ010000080
//
LOCUS       NZ_JBGMPW010000000   4898110 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-B02-PYO-51, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMPW000000000
VERSION     NZ_JBGMPW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076753
            Assembly: GCF_045797685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4898110)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4898110)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMPW000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMPW000000000.  This version of the project
            (01) has the accession number NZ_JBGMPW010000000, and consists of
            sequences JBGMPW010000001-JBGMPW010000064.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 29-SEP-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 104x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797685.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:21:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,725
            CDSs (total)                      :: 4,630
            Genes (coding)                    :: 4,468
            CDSs (with protein)               :: 4,468
            Genes (RNA)                       :: 95
            rRNAs                             :: 5, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 3, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 162
            CDSs (without protein)            :: 162
            Pseudo Genes (ambiguous residues) :: 0 of 162
            Pseudo Genes (frameshifted)       :: 69 of 162
            Pseudo Genes (incomplete)         :: 113 of 162
            Pseudo Genes (internal stop)      :: 29 of 162
            Pseudo Genes (multiple problems)  :: 41 of 162
            Pseudo Genes (short protein)      :: 1 of 162
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4898110
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-B02-PYO-51"
                     /isolation_source="Uterus"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2020-02-05"
WGS         JBGMPW010000001-JBGMPW010000064
WGS_SCAFLD  NZ_JBGMPW010000001-NZ_JBGMPW010000064
//
LOCUS       NZ_JBGMON010000000   5096175 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-H03-PYO-151, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMON000000000
VERSION     NZ_JBGMON000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076788
            Assembly: GCF_045796725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5096175)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5096175)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMON000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMON000000000.  This version of the project
            (01) has the accession number NZ_JBGMON010000000, and consists of
            sequences JBGMON010000001-JBGMON010000073.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-NOV-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 99x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045796725.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:04:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,078
            CDSs (total)                      :: 4,974
            Genes (coding)                    :: 4,754
            CDSs (with protein)               :: 4,754
            Genes (RNA)                       :: 104
            rRNAs                             :: 5, 8, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 4, 8, 6 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 220
            CDSs (without protein)            :: 220
            Pseudo Genes (ambiguous residues) :: 1 of 220
            Pseudo Genes (frameshifted)       :: 95 of 220
            Pseudo Genes (incomplete)         :: 157 of 220
            Pseudo Genes (internal stop)      :: 42 of 220
            Pseudo Genes (multiple problems)  :: 69 of 220
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5096175
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-H03-PYO-151"
                     /isolation_source="urine"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2020-10-16"
WGS         JBGMON010000001-JBGMON010000073
WGS_SCAFLD  NZ_JBGMON010000001-NZ_JBGMON010000073
//
LOCUS       NZ_JBGMPH010000000   5225936 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-D05-PYO-278, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMPH000000000
VERSION     NZ_JBGMPH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076768
            Assembly: GCF_045797375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5225936)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5225936)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMPH000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMPH000000000.  This version of the project
            (01) has the accession number NZ_JBGMPH010000000, and consists of
            sequences JBGMPH010000001-JBGMPH010000138.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 14-OCT-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 93x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797375.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:03:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,220
            CDSs (total)                      :: 5,117
            Genes (coding)                    :: 4,833
            CDSs (with protein)               :: 4,833
            Genes (RNA)                       :: 103
            rRNAs                             :: 8, 7, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 7, 7, 4 (5S, 16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 284
            CDSs (without protein)            :: 284
            Pseudo Genes (ambiguous residues) :: 0 of 284
            Pseudo Genes (frameshifted)       :: 109 of 284
            Pseudo Genes (incomplete)         :: 222 of 284
            Pseudo Genes (internal stop)      :: 49 of 284
            Pseudo Genes (multiple problems)  :: 85 of 284
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5225936
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-D05-PYO-278"
                     /isolation_source="urine"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2022-02-11"
WGS         JBGMPH010000001-JBGMPH010000138
WGS_SCAFLD  NZ_JBGMPH010000001-NZ_JBGMPH010000138
//
LOCUS       NZ_JADOEA010000000   5072808 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 20-AB00778-0, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JADOEA000000000
VERSION     NZ_JADOEA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN16793106
            Assembly: GCF_045748365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5072808)
  AUTHORS   Hammerl,J.A.
  TITLE     Genome sequences of Escherichia coli from livestock and food
            involved in the development of emerging clonal lineages in humans
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5072808)
  AUTHORS   Hammerl,J.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-NOV-2020) Biological Safety, German Federal Institute
            for Risk Assessment, Diedersdorfer Weg 1, Berlin 12277, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JADOEA000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JADOEA000000000.  This version of the project
            (01) has the accession number NZ_JADOEA010000000, and consists of
            sequences JADOEA010000001-JADOEA010000141.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from German Federal Institute for
            Risk Assessment.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.6.7
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 75.0x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045748365.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:36:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,053
            CDSs (total)                      :: 4,966
            Genes (coding)                    :: 4,767
            CDSs (with protein)               :: 4,767
            Genes (RNA)                       :: 87
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 199
            CDSs (without protein)            :: 199
            Pseudo Genes (ambiguous residues) :: 0 of 199
            Pseudo Genes (frameshifted)       :: 74 of 199
            Pseudo Genes (incomplete)         :: 125 of 199
            Pseudo Genes (internal stop)      :: 36 of 199
            Pseudo Genes (multiple problems)  :: 34 of 199
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5072808
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="20-AB00778-0"
                     /isolation_source="turkey"
                     /db_xref="taxon:562"
                     /geo_loc_name="Germany"
                     /collection_date="2020"
                     /collected_by="German Federal Institute for Risk
                     Assessment"
WGS         JADOEA010000001-JADOEA010000141
WGS_SCAFLD  NZ_JADOEA010000001-NZ_JADOEA010000141
//
LOCUS       NZ_JBIHGJ010000000   5204690 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E876, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHGJ000000000
VERSION     NZ_JBIHGJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235220
            Assembly: GCF_045608925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5204690)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHGJ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHGJ000000000.  This version of the project
            (01) has the accession number NZ_JBIHGJ010000000, and consists of
            sequences JBIHGJ010000001-JBIHGJ010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 387x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045608925.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:54:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,180
            CDSs (total)                      :: 5,064
            Genes (coding)                    :: 4,769
            CDSs (with protein)               :: 4,769
            Genes (RNA)                       :: 116
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 295
            CDSs (without protein)            :: 295
            Pseudo Genes (ambiguous residues) :: 0 of 295
            Pseudo Genes (frameshifted)       :: 127 of 295
            Pseudo Genes (incomplete)         :: 167 of 295
            Pseudo Genes (internal stop)      :: 33 of 295
            Pseudo Genes (multiple problems)  :: 29 of 295
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5204690
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E876"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHGJ010000001-JBIHGJ010000007
WGS_SCAFLD  NZ_JBIHGJ010000001-NZ_JBIHGJ010000007
//
LOCUS       NZ_JBGMPQ010000000   4898322 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-C02-PYO-56, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMPQ000000000
VERSION     NZ_JBGMPQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076759
            Assembly: GCF_045797565.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4898322)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4898322)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMPQ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMPQ000000000.  This version of the project
            (01) has the accession number NZ_JBGMPQ010000000, and consists of
            sequences JBGMPQ010000001-JBGMPQ010000060.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 05-OCT-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 104x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797565.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:14:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,727
            CDSs (total)                      :: 4,632
            Genes (coding)                    :: 4,469
            CDSs (with protein)               :: 4,469
            Genes (RNA)                       :: 95
            rRNAs                             :: 5, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 3, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 163
            CDSs (without protein)            :: 163
            Pseudo Genes (ambiguous residues) :: 1 of 163
            Pseudo Genes (frameshifted)       :: 69 of 163
            Pseudo Genes (incomplete)         :: 113 of 163
            Pseudo Genes (internal stop)      :: 29 of 163
            Pseudo Genes (multiple problems)  :: 41 of 163
            Pseudo Genes (short protein)      :: 1 of 163
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4898322
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-C02-PYO-56"
                     /isolation_source="urine"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2020-05-05"
WGS         JBGMPQ010000001-JBGMPQ010000060
WGS_SCAFLD  NZ_JBGMPQ010000001-NZ_JBGMPQ010000060
//
LOCUS       NZ_JBIHGZ010000000   5449348 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E857, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHGZ000000000
VERSION     NZ_JBIHGZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235201
            Assembly: GCF_045609245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5449348)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHGZ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHGZ000000000.  This version of the project
            (01) has the accession number NZ_JBIHGZ010000000, and consists of
            sequences JBIHGZ010000001-JBIHGZ010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 475x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045609245.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:04:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,472
            CDSs (total)                      :: 5,362
            Genes (coding)                    :: 4,978
            CDSs (with protein)               :: 4,978
            Genes (RNA)                       :: 110
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 384
            CDSs (without protein)            :: 384
            Pseudo Genes (ambiguous residues) :: 0 of 384
            Pseudo Genes (frameshifted)       :: 218 of 384
            Pseudo Genes (incomplete)         :: 207 of 384
            Pseudo Genes (internal stop)      :: 49 of 384
            Pseudo Genes (multiple problems)  :: 79 of 384
            Pseudo Genes (short protein)      :: 1 of 384
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5449348
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E857"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHGZ010000001-JBIHGZ010000004
WGS_SCAFLD  NZ_JBIHGZ010000001-NZ_JBIHGZ010000004
//
LOCUS       NZ_JBIHHZ010000000   5241154 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E817, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHHZ000000000
VERSION     NZ_JBIHHZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235168
            Assembly: GCF_045609785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5241154)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHHZ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHHZ000000000.  This version of the project
            (01) has the accession number NZ_JBIHHZ010000000, and consists of
            sequences JBIHHZ010000001-JBIHHZ010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 270x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045609785.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:02:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,256
            CDSs (total)                      :: 5,144
            Genes (coding)                    :: 4,871
            CDSs (with protein)               :: 4,871
            Genes (RNA)                       :: 112
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 273
            CDSs (without protein)            :: 273
            Pseudo Genes (ambiguous residues) :: 0 of 273
            Pseudo Genes (frameshifted)       :: 129 of 273
            Pseudo Genes (incomplete)         :: 167 of 273
            Pseudo Genes (internal stop)      :: 31 of 273
            Pseudo Genes (multiple problems)  :: 48 of 273
            Pseudo Genes (short protein)      :: 1 of 273
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5241154
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E817"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHHZ010000001-JBIHHZ010000009
WGS_SCAFLD  NZ_JBIHHZ010000001-NZ_JBIHHZ010000009
//
LOCUS       NZ_JBJLXO010000000   4629378 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 170 H10, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLXO000000000
VERSION     NZ_JBJLXO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114938
            Assembly: GCF_045799295.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4629378)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLXO000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLXO000000000.  This version of the project
            (01) has the accession number NZ_JBJLXO010000000, and consists of
            sequences JBJLXO010000001-JBJLXO010000088.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 52x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799295.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:21:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,531
            CDSs (total)                      :: 4,441
            Genes (coding)                    :: 4,263
            CDSs (with protein)               :: 4,263
            Genes (RNA)                       :: 90
            rRNAs                             :: 6, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 4, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 178
            CDSs (without protein)            :: 178
            Pseudo Genes (ambiguous residues) :: 0 of 178
            Pseudo Genes (frameshifted)       :: 54 of 178
            Pseudo Genes (incomplete)         :: 118 of 178
            Pseudo Genes (internal stop)      :: 37 of 178
            Pseudo Genes (multiple problems)  :: 28 of 178
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4629378
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="170 H10"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2018-04-16"
WGS         JBJLXO010000001-JBJLXO010000088
WGS_SCAFLD  NZ_JBJLXO010000001-NZ_JBJLXO010000088
//
LOCUS       NZ_JARTZD010000000   4488890 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 511424-22, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JARTZD000000000
VERSION     NZ_JARTZD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34004168
            Assembly: GCF_045795865.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4488890)
  AUTHORS   Irimaso,E., Keinprecht,H., Szostak,M.P., Cabal Rosel,A., Stessl,B.,
            Desvars-Larrive,A., Ntakirutimana,C., Masengesho,G., Fischer,O.W.,
            Wittek,T., Mueller,E., Fessler,A.T., Braun,S.F., Schwarz,S.,
            Monecke,S., Ehricht,R., Spergser,J., Ruppitsch,W. and Loncaric,I.
  TITLE     Presence of broad-spectrum cephalosporin-resistant Enterobacterales
            isolated from ruminants in Rwanda
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4488890)
  AUTHORS   Szostak,M.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-MAR-2023) Department of Pathobiology, Institute of
            Microbiology, Veterinary University Vienna, Veterinaerplatz 1,
            Vienna 1210, Austria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARTZD000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JARTZD000000000.  This version of the project
            (01) has the accession number NZ_JARTZD010000000, and consists of
            sequences JARTZD010000001-JARTZD010000322.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 67x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795865.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:00:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,534
            CDSs (total)                      :: 4,454
            Genes (coding)                    :: 4,184
            CDSs (with protein)               :: 4,184
            Genes (RNA)                       :: 80
            rRNAs                             :: 4, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3, 2 (5S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 270
            CDSs (without protein)            :: 270
            Pseudo Genes (ambiguous residues) :: 0 of 270
            Pseudo Genes (frameshifted)       :: 62 of 270
            Pseudo Genes (incomplete)         :: 205 of 270
            Pseudo Genes (internal stop)      :: 41 of 270
            Pseudo Genes (multiple problems)  :: 34 of 270
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4488890
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="511424-22"
                     /host="goat"
                     /db_xref="taxon:562"
                     /geo_loc_name="Rwanda: Musanze"
                     /collection_date="2021"
                     /collected_by="Helga Keinprecht"
WGS         JARTZD010000001-JARTZD010000322
WGS_SCAFLD  NZ_JARTZD010000001-NZ_JARTZD010000322
//
LOCUS       NZ_JBIHIU010000000   5794428 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E781, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHIU000000000
VERSION     NZ_JBIHIU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235138
            Assembly: GCF_045610165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5794428)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHIU000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHIU000000000.  This version of the project
            (01) has the accession number NZ_JBIHIU010000000, and consists of
            sequences JBIHIU010000001-JBIHIU010000017.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 137x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045610165.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:20:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,664
            CDSs (total)                      :: 5,553
            Genes (coding)                    :: 5,180
            CDSs (with protein)               :: 5,180
            Genes (RNA)                       :: 111
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 373
            CDSs (without protein)            :: 373
            Pseudo Genes (ambiguous residues) :: 0 of 373
            Pseudo Genes (frameshifted)       :: 224 of 373
            Pseudo Genes (incomplete)         :: 188 of 373
            Pseudo Genes (internal stop)      :: 52 of 373
            Pseudo Genes (multiple problems)  :: 76 of 373
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5794428
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E781"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHIU010000001-JBIHIU010000017
WGS_SCAFLD  NZ_JBIHIU010000001-NZ_JBIHIU010000017
//
LOCUS       NZ_JARUAN010000000   4933525 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 510370-22, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JARUAN000000000
VERSION     NZ_JARUAN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34004132
            Assembly: GCF_045796645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4933525)
  AUTHORS   Irimaso,E., Keinprecht,H., Szostak,M.P., Cabal Rosel,A., Stessl,B.,
            Desvars-Larrive,A., Ntakirutimana,C., Masengesho,G., Fischer,O.W.,
            Wittek,T., Mueller,E., Fessler,A.T., Braun,S.F., Schwarz,S.,
            Monecke,S., Ehricht,R., Spergser,J., Ruppitsch,W. and Loncaric,I.
  TITLE     Presence of broad-spectrum cephalosporin-resistant Enterobacterales
            isolated from ruminants in Rwanda
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4933525)
  AUTHORS   Szostak,M.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-MAR-2023) Department of Pathobiology, Institute of
            Microbiology, Veterinary University Vienna, Veterinaerplatz 1,
            Vienna 1210, Austria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARUAN000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JARUAN000000000.  This version of the project
            (01) has the accession number NZ_JARUAN010000000, and consists of
            sequences JARUAN010000001-JARUAN010000252.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 37x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045796645.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:56:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,831
            CDSs (total)                      :: 4,739
            Genes (coding)                    :: 4,552
            CDSs (with protein)               :: 4,552
            Genes (RNA)                       :: 92
            rRNAs                             :: 2, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 187
            CDSs (without protein)            :: 187
            Pseudo Genes (ambiguous residues) :: 0 of 187
            Pseudo Genes (frameshifted)       :: 46 of 187
            Pseudo Genes (incomplete)         :: 146 of 187
            Pseudo Genes (internal stop)      :: 28 of 187
            Pseudo Genes (multiple problems)  :: 28 of 187
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4933525
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="510370-22"
                     /host="goat"
                     /db_xref="taxon:562"
                     /geo_loc_name="Rwanda: Musanze"
                     /collection_date="2021"
                     /collected_by="Helga Keinprecht"
WGS         JARUAN010000001-JARUAN010000252
WGS_SCAFLD  NZ_JARUAN010000001-NZ_JARUAN010000252
//
LOCUS       NZ_JBGMOR010000000   5144310 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-G04-PYO-237, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMOR000000000
VERSION     NZ_JBGMOR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076784
            Assembly: GCF_045796845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5144310)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5144310)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMOR000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMOR000000000.  This version of the project
            (01) has the accession number NZ_JBGMOR010000000, and consists of
            sequences JBGMOR010000001-JBGMOR010000125.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 30-OCT-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 99x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045796845.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:12:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,076
            CDSs (total)                      :: 4,973
            Genes (coding)                    :: 4,725
            CDSs (with protein)               :: 4,725
            Genes (RNA)                       :: 103
            rRNAs                             :: 6, 11, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 4, 11 (5S, 16S)
            tRNAs                             :: 79
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 248
            CDSs (without protein)            :: 248
            Pseudo Genes (ambiguous residues) :: 0 of 248
            Pseudo Genes (frameshifted)       :: 96 of 248
            Pseudo Genes (incomplete)         :: 183 of 248
            Pseudo Genes (internal stop)      :: 41 of 248
            Pseudo Genes (multiple problems)  :: 58 of 248
            Pseudo Genes (short protein)      :: 1 of 248
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5144310
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-G04-PYO-237"
                     /isolation_source="urine"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2021-07-09"
WGS         JBGMOR010000001-JBGMOR010000125
WGS_SCAFLD  NZ_JBGMOR010000001-NZ_JBGMOR010000125
//
LOCUS       NZ_JARTZS010000000   5120261 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 511409-22, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JARTZS000000000
VERSION     NZ_JARTZS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34004153
            Assembly: GCF_045796165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5120261)
  AUTHORS   Irimaso,E., Keinprecht,H., Szostak,M.P., Cabal Rosel,A., Stessl,B.,
            Desvars-Larrive,A., Ntakirutimana,C., Masengesho,G., Fischer,O.W.,
            Wittek,T., Mueller,E., Fessler,A.T., Braun,S.F., Schwarz,S.,
            Monecke,S., Ehricht,R., Spergser,J., Ruppitsch,W. and Loncaric,I.
  TITLE     Presence of broad-spectrum cephalosporin-resistant Enterobacterales
            isolated from ruminants in Rwanda
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5120261)
  AUTHORS   Szostak,M.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-MAR-2023) Department of Pathobiology, Institute of
            Microbiology, Veterinary University Vienna, Veterinaerplatz 1,
            Vienna 1210, Austria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARTZS000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JARTZS000000000.  This version of the project
            (01) has the accession number NZ_JARTZS010000000, and consists of
            sequences JARTZS010000001-JARTZS010000367.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 51x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045796165.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:02:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,113
            CDSs (total)                      :: 5,021
            Genes (coding)                    :: 4,788
            CDSs (with protein)               :: 4,788
            Genes (RNA)                       :: 92
            rRNAs                             :: 4, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 233
            CDSs (without protein)            :: 233
            Pseudo Genes (ambiguous residues) :: 0 of 233
            Pseudo Genes (frameshifted)       :: 73 of 233
            Pseudo Genes (incomplete)         :: 170 of 233
            Pseudo Genes (internal stop)      :: 32 of 233
            Pseudo Genes (multiple problems)  :: 37 of 233
            Pseudo Genes (short protein)      :: 1 of 233
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5120261
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="511409-22"
                     /host="cattle"
                     /db_xref="taxon:562"
                     /geo_loc_name="Rwanda: Musanze"
                     /collection_date="2021"
                     /collected_by="Helga Keinprecht"
WGS         JARTZS010000001-JARTZS010000367
WGS_SCAFLD  NZ_JARTZS010000001-NZ_JARTZS010000367
//
LOCUS       NZ_JBIHJD010000000   5082620 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E766, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHJD000000000
VERSION     NZ_JBIHJD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235126
            Assembly: GCF_045610365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5082620)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHJD000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHJD000000000.  This version of the project
            (01) has the accession number NZ_JBIHJD010000000, and consists of
            sequences JBIHJD010000001-JBIHJD010000017.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 80x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045610365.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:00:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,037
            CDSs (total)                      :: 4,913
            Genes (coding)                    :: 4,511
            CDSs (with protein)               :: 4,511
            Genes (RNA)                       :: 124
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 91
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 402
            CDSs (without protein)            :: 402
            Pseudo Genes (ambiguous residues) :: 0 of 402
            Pseudo Genes (frameshifted)       :: 229 of 402
            Pseudo Genes (incomplete)         :: 179 of 402
            Pseudo Genes (internal stop)      :: 49 of 402
            Pseudo Genes (multiple problems)  :: 50 of 402
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5082620
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E766"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHJD010000001-JBIHJD010000017
WGS_SCAFLD  NZ_JBIHJD010000001-NZ_JBIHJD010000017
//
LOCUS       NZ_JBGMOT010000000   4987009 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-G02-PYO-69, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMOT000000000
VERSION     NZ_JBGMOT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076782
            Assembly: GCF_045796965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4987009)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4987009)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMOT000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMOT000000000.  This version of the project
            (01) has the accession number NZ_JBGMOT010000000, and consists of
            sequences JBGMOT010000001-JBGMOT010000062.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 28-OCT-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 102x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045796965.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:12:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,886
            CDSs (total)                      :: 4,791
            Genes (coding)                    :: 4,597
            CDSs (with protein)               :: 4,597
            Genes (RNA)                       :: 95
            rRNAs                             :: 5, 5, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 3, 5 (5S, 16S)
            tRNAs                             :: 79
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 194
            CDSs (without protein)            :: 194
            Pseudo Genes (ambiguous residues) :: 0 of 194
            Pseudo Genes (frameshifted)       :: 79 of 194
            Pseudo Genes (incomplete)         :: 134 of 194
            Pseudo Genes (internal stop)      :: 41 of 194
            Pseudo Genes (multiple problems)  :: 53 of 194
            Pseudo Genes (short protein)      :: 1 of 194
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4987009
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-G02-PYO-69"
                     /isolation_source="urine"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2020-03-06"
WGS         JBGMOT010000001-JBGMOT010000062
WGS_SCAFLD  NZ_JBGMOT010000001-NZ_JBGMOT010000062
//
LOCUS       NZ_JBGMOW010000000   5029098 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-F04-PYO-235, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMOW000000000
VERSION     NZ_JBGMOW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076779
            Assembly: GCF_045797145.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5029098)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5029098)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMOW000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMOW000000000.  This version of the project
            (01) has the accession number NZ_JBGMOW010000000, and consists of
            sequences JBGMOW010000001-JBGMOW010000174.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 25-OCT-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 104x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797145.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:09:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,965
            CDSs (total)                      :: 4,866
            Genes (coding)                    :: 4,599
            CDSs (with protein)               :: 4,599
            Genes (RNA)                       :: 99
            rRNAs                             :: 6, 5, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 5, 3 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 109 of 267
            Pseudo Genes (incomplete)         :: 194 of 267
            Pseudo Genes (internal stop)      :: 43 of 267
            Pseudo Genes (multiple problems)  :: 71 of 267
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5029098
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-F04-PYO-235"
                     /isolation_source="urine"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2021-06-01"
WGS         JBGMOW010000001-JBGMOW010000174
WGS_SCAFLD  NZ_JBGMOW010000001-NZ_JBGMOW010000174
//
LOCUS       NZ_JBIHKR010000000   5366894 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E699, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHKR000000000
VERSION     NZ_JBIHKR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235072
            Assembly: GCF_045611185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5366894)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHKR000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHKR000000000.  This version of the project
            (01) has the accession number NZ_JBIHKR010000000, and consists of
            sequences JBIHKR010000001-JBIHKR010000015.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 246x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045611185.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:12:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,343
            CDSs (total)                      :: 5,226
            Genes (coding)                    :: 4,957
            CDSs (with protein)               :: 4,957
            Genes (RNA)                       :: 117
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 269
            CDSs (without protein)            :: 269
            Pseudo Genes (ambiguous residues) :: 0 of 269
            Pseudo Genes (frameshifted)       :: 164 of 269
            Pseudo Genes (incomplete)         :: 115 of 269
            Pseudo Genes (internal stop)      :: 34 of 269
            Pseudo Genes (multiple problems)  :: 40 of 269
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5366894
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E699"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHKR010000001-JBIHKR010000015
WGS_SCAFLD  NZ_JBIHKR010000001-NZ_JBIHKR010000015
//
LOCUS       NZ_JARUAC010000000   5283496 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 511399-22, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JARUAC000000000
VERSION     NZ_JARUAC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34004143
            Assembly: GCF_045796395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5283496)
  AUTHORS   Irimaso,E., Keinprecht,H., Szostak,M.P., Cabal Rosel,A., Stessl,B.,
            Desvars-Larrive,A., Ntakirutimana,C., Masengesho,G., Fischer,O.W.,
            Wittek,T., Mueller,E., Fessler,A.T., Braun,S.F., Schwarz,S.,
            Monecke,S., Ehricht,R., Spergser,J., Ruppitsch,W. and Loncaric,I.
  TITLE     Presence of broad-spectrum cephalosporin-resistant Enterobacterales
            isolated from ruminants in Rwanda
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5283496)
  AUTHORS   Szostak,M.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-MAR-2023) Department of Pathobiology, Institute of
            Microbiology, Veterinary University Vienna, Veterinaerplatz 1,
            Vienna 1210, Austria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARUAC000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JARUAC000000000.  This version of the project
            (01) has the accession number NZ_JARUAC010000000, and consists of
            sequences JARUAC010000001-JARUAC010000403.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045796395.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:00:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,492
            CDSs (total)                      :: 5,397
            Genes (coding)                    :: 5,089
            CDSs (with protein)               :: 5,089
            Genes (RNA)                       :: 95
            rRNAs                             :: 3, 2, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 2, 7 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 308
            CDSs (without protein)            :: 308
            Pseudo Genes (ambiguous residues) :: 0 of 308
            Pseudo Genes (frameshifted)       :: 87 of 308
            Pseudo Genes (incomplete)         :: 223 of 308
            Pseudo Genes (internal stop)      :: 29 of 308
            Pseudo Genes (multiple problems)  :: 31 of 308
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5283496
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="511399-22"
                     /host="cattle"
                     /db_xref="taxon:562"
                     /geo_loc_name="Rwanda: Musanze"
                     /collection_date="2021"
                     /collected_by="Helga Keinprecht"
WGS         JARUAC010000001-JARUAC010000403
WGS_SCAFLD  NZ_JARUAC010000001-NZ_JARUAC010000403
//
LOCUS       NZ_JBGMPI010000000   5029376 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-D04-PYO-229, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMPI000000000
VERSION     NZ_JBGMPI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076767
            Assembly: GCF_045797365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5029376)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5029376)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMPI000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMPI000000000.  This version of the project
            (01) has the accession number NZ_JBGMPI010000000, and consists of
            sequences JBGMPI010000001-JBGMPI010000169.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 13-OCT-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 103x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797365.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:14:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,968
            CDSs (total)                      :: 4,863
            Genes (coding)                    :: 4,595
            CDSs (with protein)               :: 4,595
            Genes (RNA)                       :: 105
            rRNAs                             :: 6, 9, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 9, 6 (5S, 16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 268
            CDSs (without protein)            :: 268
            Pseudo Genes (ambiguous residues) :: 0 of 268
            Pseudo Genes (frameshifted)       :: 110 of 268
            Pseudo Genes (incomplete)         :: 195 of 268
            Pseudo Genes (internal stop)      :: 43 of 268
            Pseudo Genes (multiple problems)  :: 72 of 268
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5029376
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-D04-PYO-229"
                     /isolation_source="urine"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2021-05-18"
WGS         JBGMPI010000001-JBGMPI010000169
WGS_SCAFLD  NZ_JBGMPI010000001-NZ_JBGMPI010000169
//
LOCUS       NZ_JBGMPT010000000   5226124 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-B05-PYO-275, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMPT000000000
VERSION     NZ_JBGMPT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076756
            Assembly: GCF_045797585.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5226124)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5226124)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMPT000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMPT000000000.  This version of the project
            (01) has the accession number NZ_JBGMPT010000000, and consists of
            sequences JBGMPT010000001-JBGMPT010000147.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 02-OCT-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 92x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797585.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:07:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,222
            CDSs (total)                      :: 5,118
            Genes (coding)                    :: 4,839
            CDSs (with protein)               :: 4,839
            Genes (RNA)                       :: 104
            rRNAs                             :: 9, 9, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 6, 9, 4 (5S, 16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 279
            CDSs (without protein)            :: 279
            Pseudo Genes (ambiguous residues) :: 0 of 279
            Pseudo Genes (frameshifted)       :: 108 of 279
            Pseudo Genes (incomplete)         :: 216 of 279
            Pseudo Genes (internal stop)      :: 49 of 279
            Pseudo Genes (multiple problems)  :: 83 of 279
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5226124
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-B05-PYO-275"
                     /isolation_source="urine"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2022-01-28"
WGS         JBGMPT010000001-JBGMPT010000147
WGS_SCAFLD  NZ_JBGMPT010000001-NZ_JBGMPT010000147
//
LOCUS       NZ_JBIWYT010000000   5588737 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1243, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIWYT000000000
VERSION     NZ_JBIWYT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247386
            Assembly: GCF_045618185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5588737)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIWYT000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIWYT000000000.  This version of the project
            (01) has the accession number NZ_JBIWYT010000000, and consists of
            sequences JBIWYT010000001-JBIWYT010000013.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 534x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045618185.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:23:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,601
            CDSs (total)                      :: 5,482
            Genes (coding)                    :: 5,099
            CDSs (with protein)               :: 5,099
            Genes (RNA)                       :: 119
            rRNAs                             :: 6, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 7, 6 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 90
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 383
            CDSs (without protein)            :: 383
            Pseudo Genes (ambiguous residues) :: 0 of 383
            Pseudo Genes (frameshifted)       :: 211 of 383
            Pseudo Genes (incomplete)         :: 185 of 383
            Pseudo Genes (internal stop)      :: 53 of 383
            Pseudo Genes (multiple problems)  :: 60 of 383
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5588737
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1243"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIWYT010000001-JBIWYT010000013
WGS_SCAFLD  NZ_JBIWYT010000001-NZ_JBIWYT010000013
//
LOCUS       NZ_JBGMPY010000000   5125277 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-A06-PYO-319, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMPY000000000
VERSION     NZ_JBGMPY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076751
            Assembly: GCF_045797725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5125277)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5125277)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMPY000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMPY000000000.  This version of the project
            (01) has the accession number NZ_JBGMPY010000000, and consists of
            sequences JBGMPY010000001-JBGMPY010000098.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 27-SEP-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 94x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797725.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:21:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,088
            CDSs (total)                      :: 4,982
            Genes (coding)                    :: 4,746
            CDSs (with protein)               :: 4,746
            Genes (RNA)                       :: 106
            rRNAs                             :: 9, 10, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 7, 10, 4 (5S, 16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 236
            CDSs (without protein)            :: 236
            Pseudo Genes (ambiguous residues) :: 0 of 236
            Pseudo Genes (frameshifted)       :: 98 of 236
            Pseudo Genes (incomplete)         :: 174 of 236
            Pseudo Genes (internal stop)      :: 41 of 236
            Pseudo Genes (multiple problems)  :: 71 of 236
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5125277
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-A06-PYO-319"
                     /isolation_source="urine"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2022-11-15"
WGS         JBGMPY010000001-JBGMPY010000098
WGS_SCAFLD  NZ_JBGMPY010000001-NZ_JBGMPY010000098
//
LOCUS       NZ_JBGMOO010000000   5158549 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain P01-H02-PYO-84, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBGMOO000000000
VERSION     NZ_JBGMOO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43076787
            Assembly: GCF_045796785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5158549)
  AUTHORS   Ylhainen,A.
  TITLE     Bacteria associated with canine pyomveetra and persistence of
            concurrent bacteriuria - a prospective study
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5158549)
  AUTHORS   Gronthal,T.S.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2024) Animal Health Diagnostics Unit, Finnish
            Food Authority, Mustialankatu 3, Helsinki 00790, Finland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGMOO000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBGMOO000000000.  This version of the project
            (01) has the accession number NZ_JBGMOO010000000, and consists of
            sequences JBGMOO010000001-JBGMOO010000181.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 02-NOV-2023
            Assembly Method        :: Velvet v. 1.1.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 94x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045796785.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:04:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,138
            CDSs (total)                      :: 5,026
            Genes (coding)                    :: 4,756
            CDSs (with protein)               :: 4,756
            Genes (RNA)                       :: 112
            rRNAs                             :: 8, 11, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 6, 11, 8 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 270
            CDSs (without protein)            :: 270
            Pseudo Genes (ambiguous residues) :: 1 of 270
            Pseudo Genes (frameshifted)       :: 108 of 270
            Pseudo Genes (incomplete)         :: 204 of 270
            Pseudo Genes (internal stop)      :: 45 of 270
            Pseudo Genes (multiple problems)  :: 80 of 270
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5158549
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="P01-H02-PYO-84"
                     /isolation_source="urine"
                     /host="Canis lupus familiaris"
                     /db_xref="taxon:562"
                     /geo_loc_name="Finland"
                     /collection_date="2020-05-05"
WGS         JBGMOO010000001-JBGMOO010000181
WGS_SCAFLD  NZ_JBGMOO010000001-NZ_JBGMOO010000181
//
LOCUS       NZ_JBIXBF010000000   5372488 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1165, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXBF000000000
VERSION     NZ_JBIXBF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247322
            Assembly: GCF_045619485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5372488)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXBF000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXBF000000000.  This version of the project
            (01) has the accession number NZ_JBIXBF010000000, and consists of
            sequences JBIXBF010000001-JBIXBF010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 293x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045619485.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:12:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,257
            CDSs (total)                      :: 5,140
            Genes (coding)                    :: 4,890
            CDSs (with protein)               :: 4,890
            Genes (RNA)                       :: 117
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 250
            CDSs (without protein)            :: 250
            Pseudo Genes (ambiguous residues) :: 0 of 250
            Pseudo Genes (frameshifted)       :: 127 of 250
            Pseudo Genes (incomplete)         :: 133 of 250
            Pseudo Genes (internal stop)      :: 32 of 250
            Pseudo Genes (multiple problems)  :: 36 of 250
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5372488
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1165"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXBF010000001-JBIXBF010000005
WGS_SCAFLD  NZ_JBIXBF010000001-NZ_JBIXBF010000005
//
LOCUS       NZ_JBJLXQ010000000   4840341 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 177 E3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLXQ000000000
VERSION     NZ_JBJLXQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114940
            Assembly: GCF_045799235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4840341)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLXQ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLXQ000000000.  This version of the project
            (01) has the accession number NZ_JBJLXQ010000000, and consists of
            sequences JBJLXQ010000001-JBJLXQ010000089.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799235.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:23:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,770
            CDSs (total)                      :: 4,674
            Genes (coding)                    :: 4,438
            CDSs (with protein)               :: 4,438
            Genes (RNA)                       :: 96
            rRNAs                             :: 6, 4, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 4, 3, 5 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 236
            CDSs (without protein)            :: 236
            Pseudo Genes (ambiguous residues) :: 0 of 236
            Pseudo Genes (frameshifted)       :: 79 of 236
            Pseudo Genes (incomplete)         :: 156 of 236
            Pseudo Genes (internal stop)      :: 41 of 236
            Pseudo Genes (multiple problems)  :: 34 of 236
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4840341
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="177 E3"
                     /isolation_source="Urines (Infection)"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2018-06-27"
WGS         JBJLXQ010000001-JBJLXQ010000089
WGS_SCAFLD  NZ_JBJLXQ010000001-NZ_JBJLXQ010000089
//
LOCUS       NZ_JBIHFC010000000   5185980 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E927, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHFC000000000
VERSION     NZ_JBIHFC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235264
            Assembly: GCF_045608245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5185980)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHFC000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHFC000000000.  This version of the project
            (01) has the accession number NZ_JBIHFC010000000, and consists of
            sequences JBIHFC010000001-JBIHFC010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 154x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045608245.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:04:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,958
            CDSs (total)                      :: 4,842
            Genes (coding)                    :: 4,646
            CDSs (with protein)               :: 4,646
            Genes (RNA)                       :: 116
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 196
            CDSs (without protein)            :: 196
            Pseudo Genes (ambiguous residues) :: 0 of 196
            Pseudo Genes (frameshifted)       :: 118 of 196
            Pseudo Genes (incomplete)         :: 87 of 196
            Pseudo Genes (internal stop)      :: 30 of 196
            Pseudo Genes (multiple problems)  :: 36 of 196
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5185980
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E927"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHFC010000001-JBIHFC010000008
WGS_SCAFLD  NZ_JBIHFC010000001-NZ_JBIHFC010000008
//
LOCUS       NZ_JBIHHS010000000   5590432 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E826, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHHS000000000
VERSION     NZ_JBIHHS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235177
            Assembly: GCF_045609645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5590432)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHHS000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHHS000000000.  This version of the project
            (01) has the accession number NZ_JBIHHS010000000, and consists of
            sequences JBIHHS010000001-JBIHHS010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 390x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045609645.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:06:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,559
            CDSs (total)                      :: 5,439
            Genes (coding)                    :: 5,083
            CDSs (with protein)               :: 5,083
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 356
            CDSs (without protein)            :: 356
            Pseudo Genes (ambiguous residues) :: 0 of 356
            Pseudo Genes (frameshifted)       :: 216 of 356
            Pseudo Genes (incomplete)         :: 161 of 356
            Pseudo Genes (internal stop)      :: 40 of 356
            Pseudo Genes (multiple problems)  :: 57 of 356
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5590432
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E826"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHHS010000001-JBIHHS010000007
WGS_SCAFLD  NZ_JBIHHS010000001-NZ_JBIHHS010000007
//
LOCUS       NZ_JBIHJB010000000   5318566 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E769, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHJB000000000
VERSION     NZ_JBIHJB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235128
            Assembly: GCF_045610345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5318566)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHJB000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHJB000000000.  This version of the project
            (01) has the accession number NZ_JBIHJB010000000, and consists of
            sequences JBIHJB010000001-JBIHJB010000011.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 316x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045610345.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:00:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,354
            CDSs (total)                      :: 5,229
            Genes (coding)                    :: 4,872
            CDSs (with protein)               :: 4,872
            Genes (RNA)                       :: 125
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 94
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 357
            CDSs (without protein)            :: 357
            Pseudo Genes (ambiguous residues) :: 0 of 357
            Pseudo Genes (frameshifted)       :: 205 of 357
            Pseudo Genes (incomplete)         :: 164 of 357
            Pseudo Genes (internal stop)      :: 48 of 357
            Pseudo Genes (multiple problems)  :: 57 of 357
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5318566
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E769"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHJB010000001-JBIHJB010000011
WGS_SCAFLD  NZ_JBIHJB010000001-NZ_JBIHJB010000011
//
LOCUS       NZ_JBIHJX010000000   4994034 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E733, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHJX000000000
VERSION     NZ_JBIHJX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235098
            Assembly: GCF_045610745.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4994034)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHJX000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHJX000000000.  This version of the project
            (01) has the accession number NZ_JBIHJX010000000, and consists of
            sequences JBIHJX010000001-JBIHJX010000011.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 224x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045610745.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:17:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,912
            CDSs (total)                      :: 4,795
            Genes (coding)                    :: 4,472
            CDSs (with protein)               :: 4,472
            Genes (RNA)                       :: 117
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 323
            CDSs (without protein)            :: 323
            Pseudo Genes (ambiguous residues) :: 0 of 323
            Pseudo Genes (frameshifted)       :: 183 of 323
            Pseudo Genes (incomplete)         :: 159 of 323
            Pseudo Genes (internal stop)      :: 48 of 323
            Pseudo Genes (multiple problems)  :: 59 of 323
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4994034
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E733"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHJX010000001-JBIHJX010000011
WGS_SCAFLD  NZ_JBIHJX010000001-NZ_JBIHJX010000011
//
LOCUS       NZ_JBIHKP010000000   5035086 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E702, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIHKP000000000
VERSION     NZ_JBIHKP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44235074
            Assembly: GCF_045611165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5035086)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIHKP000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIHKP000000000.  This version of the project
            (01) has the accession number NZ_JBIHKP010000000, and consists of
            sequences JBIHKP010000001-JBIHKP010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 346x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045611165.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:11:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,971
            CDSs (total)                      :: 4,851
            Genes (coding)                    :: 4,549
            CDSs (with protein)               :: 4,549
            Genes (RNA)                       :: 120
            rRNAs                             :: 7, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 302
            CDSs (without protein)            :: 302
            Pseudo Genes (ambiguous residues) :: 0 of 302
            Pseudo Genes (frameshifted)       :: 142 of 302
            Pseudo Genes (incomplete)         :: 178 of 302
            Pseudo Genes (internal stop)      :: 41 of 302
            Pseudo Genes (multiple problems)  :: 53 of 302
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5035086
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E702"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIHKP010000001-JBIHKP010000009
WGS_SCAFLD  NZ_JBIHKP010000001-NZ_JBIHKP010000009
//
LOCUS       NZ_JBIWYQ010000000   5248387 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1246, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIWYQ000000000
VERSION     NZ_JBIWYQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247389
            Assembly: GCF_045618245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5248387)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIWYQ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIWYQ000000000.  This version of the project
            (01) has the accession number NZ_JBIWYQ010000000, and consists of
            sequences JBIWYQ010000001-JBIWYQ010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 426x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045618245.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:32:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,260
            CDSs (total)                      :: 5,136
            Genes (coding)                    :: 4,867
            CDSs (with protein)               :: 4,867
            Genes (RNA)                       :: 124
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 92
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 269
            CDSs (without protein)            :: 269
            Pseudo Genes (ambiguous residues) :: 0 of 269
            Pseudo Genes (frameshifted)       :: 154 of 269
            Pseudo Genes (incomplete)         :: 126 of 269
            Pseudo Genes (internal stop)      :: 39 of 269
            Pseudo Genes (multiple problems)  :: 47 of 269
            Pseudo Genes (short protein)      :: 1 of 269
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5248387
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1246"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIWYQ010000001-JBIWYQ010000009
WGS_SCAFLD  NZ_JBIWYQ010000001-NZ_JBIWYQ010000009
//
LOCUS       NZ_JBIWZD010000000   5006794 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1230, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIWZD000000000
VERSION     NZ_JBIWZD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247376
            Assembly: GCF_045618445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5006794)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIWZD000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIWZD000000000.  This version of the project
            (01) has the accession number NZ_JBIWZD010000000, and consists of
            sequences JBIWZD010000001-JBIWZD010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 291x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045618445.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:32:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,922
            CDSs (total)                      :: 4,805
            Genes (coding)                    :: 4,439
            CDSs (with protein)               :: 4,439
            Genes (RNA)                       :: 117
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 366
            CDSs (without protein)            :: 366
            Pseudo Genes (ambiguous residues) :: 0 of 366
            Pseudo Genes (frameshifted)       :: 207 of 366
            Pseudo Genes (incomplete)         :: 175 of 366
            Pseudo Genes (internal stop)      :: 55 of 366
            Pseudo Genes (multiple problems)  :: 62 of 366
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5006794
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1230"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIWZD010000001-JBIWZD010000008
WGS_SCAFLD  NZ_JBIWZD010000001-NZ_JBIWZD010000008
//
LOCUS       NZ_JBIXAE010000000   5337021 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1198, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXAE000000000
VERSION     NZ_JBIXAE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247349
            Assembly: GCF_045618945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5337021)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXAE000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXAE000000000.  This version of the project
            (01) has the accession number NZ_JBIXAE010000000, and consists of
            sequences JBIXAE010000001-JBIXAE010000026.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 85x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045618945.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:17:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,365
            CDSs (total)                      :: 5,236
            Genes (coding)                    :: 4,919
            CDSs (with protein)               :: 4,919
            Genes (RNA)                       :: 129
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 95
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 317
            CDSs (without protein)            :: 317
            Pseudo Genes (ambiguous residues) :: 0 of 317
            Pseudo Genes (frameshifted)       :: 171 of 317
            Pseudo Genes (incomplete)         :: 147 of 317
            Pseudo Genes (internal stop)      :: 48 of 317
            Pseudo Genes (multiple problems)  :: 44 of 317
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5337021
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1198"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXAE010000001-JBIXAE010000026
WGS_SCAFLD  NZ_JBIXAE010000001-NZ_JBIXAE010000026
//
LOCUS       NZ_JBIXAJ010000000   5462955 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1192, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXAJ000000000
VERSION     NZ_JBIXAJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247344
            Assembly: GCF_045619085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5462955)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXAJ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXAJ000000000.  This version of the project
            (01) has the accession number NZ_JBIXAJ010000000, and consists of
            sequences JBIXAJ010000001-JBIXAJ010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 240x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045619085.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:27:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,334
            CDSs (total)                      :: 5,212
            Genes (coding)                    :: 4,901
            CDSs (with protein)               :: 4,901
            Genes (RNA)                       :: 122
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 311
            CDSs (without protein)            :: 311
            Pseudo Genes (ambiguous residues) :: 0 of 311
            Pseudo Genes (frameshifted)       :: 165 of 311
            Pseudo Genes (incomplete)         :: 164 of 311
            Pseudo Genes (internal stop)      :: 40 of 311
            Pseudo Genes (multiple problems)  :: 53 of 311
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5462955
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1192"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXAJ010000001-JBIXAJ010000004
WGS_SCAFLD  NZ_JBIXAJ010000001-NZ_JBIXAJ010000004
//
LOCUS       NZ_JBIXAV010000000   5207607 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain CPE_E1178, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBIXAV000000000
VERSION     NZ_JBIXAV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247332
            Assembly: GCF_045619345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5207607)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXAV000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBIXAV000000000.  This version of the project
            (01) has the accession number NZ_JBIXAV010000000, and consists of
            sequences JBIXAV010000001-JBIXAV010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 577x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045619345.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:19:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,147
            CDSs (total)                      :: 5,035
            Genes (coding)                    :: 4,742
            CDSs (with protein)               :: 4,742
            Genes (RNA)                       :: 112
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 293
            CDSs (without protein)            :: 293
            Pseudo Genes (ambiguous residues) :: 0 of 293
            Pseudo Genes (frameshifted)       :: 145 of 293
            Pseudo Genes (incomplete)         :: 172 of 293
            Pseudo Genes (internal stop)      :: 34 of 293
            Pseudo Genes (multiple problems)  :: 52 of 293
            Pseudo Genes (short protein)      :: 1 of 293
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5207607
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1178"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
WGS         JBIXAV010000001-JBIXAV010000005
WGS_SCAFLD  NZ_JBIXAV010000001-NZ_JBIXAV010000005
//
LOCUS       NZ_JBIXDL010000000   5728914 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1101, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXDL000000000
VERSION     NZ_JBIXDL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247264
            Assembly: GCF_045620705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5728914)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXDL000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXDL000000000.  This version of the
            project (01) has the accession number NZ_JBIXDL010000000, and
            consists of sequences JBIXDL010000001-JBIXDL010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 248x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045620705.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:32:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,599
            CDSs (total)                      :: 5,474
            Genes (coding)                    :: 5,306
            CDSs (with protein)               :: 5,306
            Genes (RNA)                       :: 125
            rRNAs                             :: 9, 8, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 9 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 168
            CDSs (without protein)            :: 168
            Pseudo Genes (ambiguous residues) :: 0 of 168
            Pseudo Genes (frameshifted)       :: 87 of 168
            Pseudo Genes (incomplete)         :: 84 of 168
            Pseudo Genes (internal stop)      :: 30 of 168
            Pseudo Genes (multiple problems)  :: 30 of 168
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5728914
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1101"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXDL010000001-JBIXDL010000004
WGS_SCAFLD  NZ_JBIXDL010000001-NZ_JBIXDL010000004
//
LOCUS       NZ_JBIXEN010000000   5523545 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1067, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXEN000000000
VERSION     NZ_JBIXEN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247236
            Assembly: GCF_045621265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5523545)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXEN000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXEN000000000.  This version of the
            project (01) has the accession number NZ_JBIXEN010000000, and
            consists of sequences JBIXEN010000001-JBIXEN010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 399x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045621265.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:22:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,461
            CDSs (total)                      :: 5,334
            Genes (coding)                    :: 5,110
            CDSs (with protein)               :: 5,110
            Genes (RNA)                       :: 127
            rRNAs                             :: 9, 9, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 9 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 224
            CDSs (without protein)            :: 224
            Pseudo Genes (ambiguous residues) :: 0 of 224
            Pseudo Genes (frameshifted)       :: 130 of 224
            Pseudo Genes (incomplete)         :: 99 of 224
            Pseudo Genes (internal stop)      :: 26 of 224
            Pseudo Genes (multiple problems)  :: 29 of 224
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5523545
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1067"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXEN010000001-JBIXEN010000008
WGS_SCAFLD  NZ_JBIXEN010000001-NZ_JBIXEN010000008
//
LOCUS       NZ_JBEBLF010000000   5727596 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain KP-7, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBEBLF000000000
VERSION     NZ_JBEBLF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41609181
            Assembly: GCF_045798445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5727596)
  AUTHORS   Sun,C. and Sun,Q.
  TITLE     Mechanism and molecular characteristics of carbapenem-resistant
            Klebsiella pneumoniae to ceftazidime avibactam
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5727596)
  AUTHORS   Sun,C. and Sun,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-MAY-2024) Department of Laboratory Medicine, The
            First Affiliated Hospital, Zhejiang University School of Medicine,
            Wenyi West Road No. 1367, Hangzhou, Zhejiang 310000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBEBLF000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBEBLF000000000.  This version of the
            project (01) has the accession number NZ_JBEBLF010000000, and
            consists of sequences JBEBLF010000001-JBEBLF010000136.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Chengdi Sun, The First
            Affiliated Hospital, Zhejiang University School of Medicine.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: DEC-2023
            Assembly Method        :: SPAdes v. 3.6.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045798445.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:57:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,764
            CDSs (total)                      :: 5,674
            Genes (coding)                    :: 5,498
            CDSs (with protein)               :: 5,498
            Genes (RNA)                       :: 90
            rRNAs                             :: 4, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 176
            CDSs (without protein)            :: 176
            Pseudo Genes (ambiguous residues) :: 0 of 176
            Pseudo Genes (frameshifted)       :: 62 of 176
            Pseudo Genes (incomplete)         :: 118 of 176
            Pseudo Genes (internal stop)      :: 30 of 176
            Pseudo Genes (multiple problems)  :: 30 of 176
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5727596
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="KP-7"
                     /isolation_source="Abdominal cavity"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China: Hangzhou"
                     /collection_date="2022-08"
WGS         JBEBLF010000001-JBEBLF010000136
WGS_SCAFLD  NZ_JBEBLF010000001-NZ_JBEBLF010000136
//
LOCUS       NZ_JBIGMX010000000   5609409 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E312, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGMX000000000
VERSION     NZ_JBIGMX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130640
            Assembly: GCF_045572275.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5609409)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGMX000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGMX000000000.  This version of the
            project (01) has the accession number NZ_JBIGMX010000000, and
            consists of sequences JBIGMX010000001-JBIGMX010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 966x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045572275.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:44:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,528
            CDSs (total)                      :: 5,401
            Genes (coding)                    :: 5,216
            CDSs (with protein)               :: 5,216
            Genes (RNA)                       :: 127
            rRNAs                             :: 9, 9, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 9 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 185
            CDSs (without protein)            :: 185
            Pseudo Genes (ambiguous residues) :: 0 of 185
            Pseudo Genes (frameshifted)       :: 96 of 185
            Pseudo Genes (incomplete)         :: 95 of 185
            Pseudo Genes (internal stop)      :: 26 of 185
            Pseudo Genes (multiple problems)  :: 29 of 185
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5609409
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E312"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGMX010000001-JBIGMX010000009
WGS_SCAFLD  NZ_JBIGMX010000001-NZ_JBIGMX010000009
//
LOCUS       NZ_JBIGOJ010000000   5695496 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E255, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGOJ000000000
VERSION     NZ_JBIGOJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130589
            Assembly: GCF_045572995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5695496)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGOJ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGOJ000000000.  This version of the
            project (01) has the accession number NZ_JBIGOJ010000000, and
            consists of sequences JBIGOJ010000001-JBIGOJ010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 299x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045572995.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:50:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,597
            CDSs (total)                      :: 5,471
            Genes (coding)                    :: 5,195
            CDSs (with protein)               :: 5,195
            Genes (RNA)                       :: 126
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 90
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 277
            CDSs (without protein)            :: 276
            Pseudo Genes (ambiguous residues) :: 0 of 277
            Pseudo Genes (frameshifted)       :: 189 of 277
            Pseudo Genes (incomplete)         :: 109 of 277
            Pseudo Genes (internal stop)      :: 53 of 277
            Pseudo Genes (multiple problems)  :: 66 of 277
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5695496
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E255"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGOJ010000001-JBIGOJ010000005
WGS_SCAFLD  NZ_JBIGOJ010000001-NZ_JBIGOJ010000005
//
LOCUS       NZ_JBIGQR010000000   5618496 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E147, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGQR000000000
VERSION     NZ_JBIGQR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130496
            Assembly: GCF_045574245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5618496)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGQR000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGQR000000000.  This version of the
            project (01) has the accession number NZ_JBIGQR010000000, and
            consists of sequences JBIGQR010000001-JBIGQR010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 97x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045574245.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:51:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,526
            CDSs (total)                      :: 5,417
            Genes (coding)                    :: 5,244
            CDSs (with protein)               :: 5,244
            Genes (RNA)                       :: 109
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 173
            CDSs (without protein)            :: 173
            Pseudo Genes (ambiguous residues) :: 0 of 173
            Pseudo Genes (frameshifted)       :: 111 of 173
            Pseudo Genes (incomplete)         :: 73 of 173
            Pseudo Genes (internal stop)      :: 16 of 173
            Pseudo Genes (multiple problems)  :: 22 of 173
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5618496
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E147"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGQR010000001-JBIGQR010000009
WGS_SCAFLD  NZ_JBIGQR010000001-NZ_JBIGQR010000009
//
LOCUS       NZ_JAHNZU010000000   5630325 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella planticola strain ROVR6, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAHNZU000000000
VERSION     NZ_JAHNZU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN19667690
            Assembly: GCF_028435885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella planticola (Raoultella planticola)
  ORGANISM  Klebsiella planticola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 5630325)
  AUTHORS   Gulasova,A., Kiskova,J., Hamarova,L., Timkova,I. and Pristas,P.
  TITLE     Draft genome of Raoultella planticola strain ROVR6
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5630325)
  AUTHORS   Gulasova,A., Kiskova,J., Hamarova,L., Timkova,I. and Pristas,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JUN-2021) Institute of Biology and Ecology,
            Department of Microbiology, Pavol Jozef Safarik University in
            Kosice, Faculty of Science, Srobarova 2, Kosice 041 54, Slovakia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAHNZU000000000.1.
            The Klebsiella planticola whole genome shotgun (WGS) project has
            the project accession NZ_JAHNZU000000000.  This version of the
            project (01) has the accession number NZ_JAHNZU010000000, and
            consists of sequences JAHNZU010000001-JAHNZU010000204.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Institute of Animal
            Physiology, Centre of Biosciences Slovak Academy of Sciences,
            Kosice, Slovakia.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 26-OCT-2020
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 615.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_028435885.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:05:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,409
            CDSs (total)                      :: 5,320
            Genes (coding)                    :: 5,203
            CDSs (with protein)               :: 5,203
            Genes (RNA)                       :: 89
            rRNAs                             :: 4, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3, 1, 4 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 117
            CDSs (without protein)            :: 117
            Pseudo Genes (ambiguous residues) :: 0 of 117
            Pseudo Genes (frameshifted)       :: 43 of 117
            Pseudo Genes (incomplete)         :: 87 of 117
            Pseudo Genes (internal stop)      :: 13 of 117
            Pseudo Genes (multiple problems)  :: 23 of 117
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5630325
                     /organism="Klebsiella planticola"
                     /mol_type="genomic DNA"
                     /strain="ROVR6"
                     /isolation_source="bird feces"
                     /host="Passer domesticus"
                     /db_xref="taxon:575"
                     /geo_loc_name="Slovakia: Sarisske Michalany"
                     /lat_lon="49.0702 N 21.1343 E"
                     /collection_date="2014-08"
WGS         JAHNZU010000001-JAHNZU010000204
WGS_SCAFLD  NZ_JAHNZU010000001-NZ_JAHNZU010000204
//
LOCUS       NZ_VNRI01000000      5981490 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella michiganensis strain 602734-17, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VNRI00000000
VERSION     NZ_VNRI00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12212220
            Assembly: GCF_020118495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella michiganensis
  ORGANISM  Klebsiella michiganensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 5981490)
  AUTHORS   Cuenod,A., Wuthrich,D., Seth-Smith,H.M.B., Ott,C., Gehringer,C.,
            Foucault,F., Mouchet,R., Kassim,A., Revathi,G., Vogt,D.R., von
            Felten,S., Bassetti,S., Tschudin-Sutter,S., Hettich,T.,
            Schlotterbeck,G., Homberger,C., Casanova,C., Moran-Gilad,J.,
            Sagi,O., Rodriguez-Sanchez,B., Muller,F., Aerni,M., Gaia,V., van
            Dessel,H., Kampinga,G.A., Muller,C., Daubenberger,C., Pfluger,V.
            and Egli,A.
  TITLE     Whole-genome sequence-informed MALDI-TOF MS diagnostics reveal
            importance of Klebsiella oxytoca group in invasive infections: a
            retrospective clinical study
  JOURNAL   Genome Med 13 (1), 150 (2021)
   PUBMED   34517886
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5981490)
  AUTHORS   Cuenod,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2019) Department of Biomedicine, University of
            Basel, Hebelstrasse 20, Basel, BS 4051, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VNRI00000000.1.
            The Klebsiella michiganensis whole genome shotgun (WGS) project has
            the project accession NZ_VNRI00000000.  This version of the project
            (01) has the accession number NZ_VNRI01000000, and consists of
            sequences VNRI01000001-VNRI01000114.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 60x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_020118495.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:52:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,700
            CDSs (total)                      :: 5,616
            Genes (coding)                    :: 5,503
            CDSs (with protein)               :: 5,503
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 113
            CDSs (without protein)            :: 113
            Pseudo Genes (ambiguous residues) :: 0 of 113
            Pseudo Genes (frameshifted)       :: 31 of 113
            Pseudo Genes (incomplete)         :: 83 of 113
            Pseudo Genes (internal stop)      :: 18 of 113
            Pseudo Genes (multiple problems)  :: 17 of 113
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5981490
                     /organism="Klebsiella michiganensis"
                     /mol_type="genomic DNA"
                     /strain="602734-17"
                     /isolation_source="Deep Tissue"
                     /host="Homo sapiens"
                     /db_xref="taxon:1134687"
                     /geo_loc_name="Switzerland"
                     /lat_lon="47.562446 N 7.583217 E"
                     /collection_date="2017"
WGS         VNRI01000001-VNRI01000114
WGS_SCAFLD  NZ_VNRI01000001-NZ_VNRI01000114
//
LOCUS       NZ_JARUBB010000000   4795403 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 510356-22, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JARUBB000000000
VERSION     NZ_JARUBB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34004118
            Assembly: GCF_045798905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4795403)
  AUTHORS   Irimaso,E., Keinprecht,H., Szostak,M.P., Cabal Rosel,A., Stessl,B.,
            Desvars-Larrive,A., Ntakirutimana,C., Masengesho,G., Fischer,O.W.,
            Wittek,T., Mueller,E., Fessler,A.T., Braun,S.F., Schwarz,S.,
            Monecke,S., Ehricht,R., Spergser,J., Ruppitsch,W. and Loncaric,I.
  TITLE     Presence of broad-spectrum cephalosporin-resistant Enterobacterales
            isolated from ruminants in Rwanda
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4795403)
  AUTHORS   Szostak,M.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-MAR-2023) Department of Pathobiology, Institute of
            Microbiology, Veterinary University Vienna, Veterinaerplatz 1,
            Vienna 1210, Austria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JARUBB000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JARUBB000000000.  This version of the project
            (01) has the accession number NZ_JARUBB010000000, and consists of
            sequences JARUBB010000001-JARUBB010000248.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 45x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045798905.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:22:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,702
            CDSs (total)                      :: 4,616
            Genes (coding)                    :: 4,441
            CDSs (with protein)               :: 4,441
            Genes (RNA)                       :: 86
            rRNAs                             :: 3, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 3, 4 (5S, 16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 175
            CDSs (without protein)            :: 175
            Pseudo Genes (ambiguous residues) :: 0 of 175
            Pseudo Genes (frameshifted)       :: 44 of 175
            Pseudo Genes (incomplete)         :: 118 of 175
            Pseudo Genes (internal stop)      :: 35 of 175
            Pseudo Genes (multiple problems)  :: 20 of 175
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4795403
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="510356-22"
                     /host="cattle"
                     /db_xref="taxon:562"
                     /geo_loc_name="Rwanda: Musanze"
                     /collection_date="2021"
                     /collected_by="Helga Keinprecht"
WGS         JARUBB010000001-JARUBB010000248
WGS_SCAFLD  NZ_JARUBB010000001-NZ_JARUBB010000248
//
LOCUS       NZ_JAPTHU010000000   6158325 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella ornithinolytica strain 95, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAPTHU000000000
VERSION     NZ_JAPTHU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN31988111
            Assembly: GCF_026891955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella ornithinolytica (Raoultella ornithinolytica)
  ORGANISM  Klebsiella ornithinolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 6158325)
  AUTHORS   Wang,H.
  TITLE     Study on infection of diabetes foot caused by carbapenem resistant
            Proteus Penneri mediated by a novel plasmid containing blaNDM
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6158325)
  AUTHORS   Li,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2022) Clinical Laboratory, Weifang People's
            Hospital, 151 Guangwen Street, Weifang 261041, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAPTHU000000000.1.
            The Klebsiella ornithinolytica whole genome shotgun (WGS) project
            has the project accession NZ_JAPTHU000000000.  This version of the
            project (01) has the accession number NZ_JAPTHU010000000, and
            consists of sequences JAPTHU010000001-JAPTHU010000089.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 10-OCT-2022
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_026891955.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:10:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,047
            CDSs (total)                      :: 5,949
            Genes (coding)                    :: 5,802
            CDSs (with protein)               :: 5,802
            Genes (RNA)                       :: 98
            rRNAs                             :: 1, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 4 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 147
            CDSs (without protein)            :: 147
            Pseudo Genes (ambiguous residues) :: 0 of 147
            Pseudo Genes (frameshifted)       :: 52 of 147
            Pseudo Genes (incomplete)         :: 110 of 147
            Pseudo Genes (internal stop)      :: 27 of 147
            Pseudo Genes (multiple problems)  :: 37 of 147
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6158325
                     /organism="Klebsiella ornithinolytica"
                     /mol_type="genomic DNA"
                     /strain="95"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:54291"
                     /geo_loc_name="China: Weifang"
                     /collection_date="2017-07-28"
WGS         JAPTHU010000001-JAPTHU010000089
WGS_SCAFLD  NZ_JAPTHU010000001-NZ_JAPTHU010000089
//
LOCUS       NZ_SCEU01000000      1242516 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Fructilactobacillus sanfranciscensis strain TMW11154, whole genome
            shotgun sequencing project.
ACCESSION   NZ_SCEU00000000
VERSION     NZ_SCEU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10744011
            Assembly: GCF_010377205.1
KEYWORDS    WGS; RefSeq.
SOURCE      Fructilactobacillus sanfranciscensis
  ORGANISM  Fructilactobacillus sanfranciscensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Fructilactobacillus.
REFERENCE   1  (bases 1 to 1242516)
  AUTHORS   Rogalski,E., Vogel,R.F. and Ehrmann,M.A.
  TITLE     Monitoring of Lactobacillus sanfranciscensis strains during wheat
            and rye sourdough fermentations by CRISPR locus length polymorphism
            PCR
  JOURNAL   Int J Food Microbiol 316, 108475 (2020)
   PUBMED   31874326
REFERENCE   2  (bases 1 to 1242516)
  AUTHORS   Rogalski,E. and Vogel,R.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JAN-2019) Technische Mikrobiologie, Technische
            Universitaet Muenchen, Gregor-Mendel Str. 4, Freising 85354,
            Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SCEU00000000.1.
            The Fructilactobacillus sanfranciscensis whole genome shotgun (WGS)
            project has the project accession NZ_SCEU00000000.  This version of
            the project (01) has the accession number NZ_SCEU01000000, and
            consists of sequences SCEU01000001-SCEU01000040.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 222x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_010377205.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:49:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,300
            CDSs (total)                      :: 1,263
            Genes (coding)                    :: 1,214
            CDSs (with protein)               :: 1,214
            Genes (RNA)                       :: 37
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 33
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 11 of 49
            Pseudo Genes (incomplete)         :: 27 of 49
            Pseudo Genes (internal stop)      :: 22 of 49
            Pseudo Genes (multiple problems)  :: 10 of 49
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1242516
                     /organism="Fructilactobacillus sanfranciscensis"
                     /mol_type="genomic DNA"
                     /strain="TMW11154"
                     /isolation_source="sourdough"
                     /db_xref="taxon:1625"
                     /geo_loc_name="USA"
                     /collection_date="2015"
WGS         SCEU01000001-SCEU01000040
WGS_SCAFLD  NZ_SCEU01000001-NZ_SCEU01000040
//
LOCUS       NZ_JBJLYM010000000   4699549 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 248 B8, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLYM000000000
VERSION     NZ_JBJLYM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114964
            Assembly: GCF_045800265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4699549)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLYM000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLYM000000000.  This version of the project
            (01) has the accession number NZ_JBJLYM010000000, and consists of
            sequences JBJLYM010000001-JBJLYM010000123.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800265.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:46:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,672
            CDSs (total)                      :: 4,566
            Genes (coding)                    :: 4,332
            CDSs (with protein)               :: 4,332
            Genes (RNA)                       :: 106
            rRNAs                             :: 6, 4, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 4, 3, 6 (5S, 16S, 23S)
            tRNAs                             :: 80
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 234
            CDSs (without protein)            :: 234
            Pseudo Genes (ambiguous residues) :: 0 of 234
            Pseudo Genes (frameshifted)       :: 70 of 234
            Pseudo Genes (incomplete)         :: 164 of 234
            Pseudo Genes (internal stop)      :: 40 of 234
            Pseudo Genes (multiple problems)  :: 34 of 234
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4699549
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="248 B8"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2020-02-05"
WGS         JBJLYM010000001-JBJLYM010000123
WGS_SCAFLD  NZ_JBJLYM010000001-NZ_JBJLYM010000123
//
LOCUS       NZ_JAACKS010000000   1797008 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Francisella tularensis subsp. holarctica strain 16T0051, whole
            genome shotgun sequencing project.
ACCESSION   NZ_JAACKS000000000
VERSION     NZ_JAACKS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12990523
            Assembly: GCF_009939485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Francisella tularensis subsp. holarctica
  ORGANISM  Francisella tularensis subsp. holarctica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Thiotrichales; Francisellaceae; Francisella.
REFERENCE   1  (bases 1 to 1797008)
  AUTHORS   Meierhofer,D., Reinert,K., Andreotti,S. and Witt,N.
  TITLE     Rapid and culture free identification of Francisella in hare
            carcasses by high-resolution mass spectrometry
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1797008)
  AUTHORS   Neubert,K., Busch,A. and Tomaso,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-NOV-2019) IBIZ, Friedrich-Loeffler-Institut,
            Naumburger Str 96a, Jena 07749, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAACKS000000000.1.
            The Francisella tularensis subsp. holarctica whole genome shotgun
            (WGS) project has the project accession NZ_JAACKS000000000.  This
            version of the project (01) has the accession number
            NZ_JAACKS010000000, and consists of sequences
            JAACKS010000001-JAACKS010000104.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2018
            Assembly Method        :: SPAdes v. 2018-01-01
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009939485.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:42:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,974
            CDSs (total)                      :: 1,929
            Genes (coding)                    :: 1,594
            CDSs (with protein)               :: 1,594
            Genes (RNA)                       :: 45
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 34
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 335
            CDSs (without protein)            :: 335
            Pseudo Genes (ambiguous residues) :: 0 of 335
            Pseudo Genes (frameshifted)       :: 147 of 335
            Pseudo Genes (incomplete)         :: 156 of 335
            Pseudo Genes (internal stop)      :: 98 of 335
            Pseudo Genes (multiple problems)  :: 60 of 335
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1797008
                     /organism="Francisella tularensis subsp. holarctica"
                     /mol_type="genomic DNA"
                     /strain="16T0051"
                     /host="Lepus europaeus"
                     /sub_species="holarctica"
                     /db_xref="taxon:119857"
                     /geo_loc_name="Germany"
                     /collection_date="2016"
                     /collected_by="Friedrich-Loeffler-Institut, IBIZ, Germany"
WGS         JAACKS010000001-JAACKS010000104
WGS_SCAFLD  NZ_JAACKS010000001-NZ_JAACKS010000104
//
LOCUS       NZ_SCES01000000      1309936 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Fructilactobacillus sanfranciscensis strain TMW11304, whole genome
            shotgun sequencing project.
ACCESSION   NZ_SCES00000000
VERSION     NZ_SCES00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10744013
            Assembly: GCF_010377175.1
KEYWORDS    WGS; RefSeq.
SOURCE      Fructilactobacillus sanfranciscensis
  ORGANISM  Fructilactobacillus sanfranciscensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Fructilactobacillus.
REFERENCE   1  (bases 1 to 1309936)
  AUTHORS   Rogalski,E., Vogel,R.F. and Ehrmann,M.A.
  TITLE     Monitoring of Lactobacillus sanfranciscensis strains during wheat
            and rye sourdough fermentations by CRISPR locus length polymorphism
            PCR
  JOURNAL   Int J Food Microbiol 316, 108475 (2020)
   PUBMED   31874326
REFERENCE   2  (bases 1 to 1309936)
  AUTHORS   Rogalski,E. and Vogel,R.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JAN-2019) Technische Mikrobiologie, Technische
            Universitaet Muenchen, Gregor-Mendel Str. 4, Freising 85354,
            Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SCES00000000.1.
            The Fructilactobacillus sanfranciscensis whole genome shotgun (WGS)
            project has the project accession NZ_SCES00000000.  This version of
            the project (01) has the accession number NZ_SCES01000000, and
            consists of sequences SCES01000001-SCES01000044.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 234x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_010377175.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:49:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,435
            CDSs (total)                      :: 1,369
            Genes (coding)                    :: 1,312
            CDSs (with protein)               :: 1,312
            Genes (RNA)                       :: 66
            rRNAs                             :: 7, 5, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 5 (5S)
            partial rRNAs                     :: 2, 5, 2 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 57
            CDSs (without protein)            :: 57
            Pseudo Genes (ambiguous residues) :: 0 of 57
            Pseudo Genes (frameshifted)       :: 20 of 57
            Pseudo Genes (incomplete)         :: 28 of 57
            Pseudo Genes (internal stop)      :: 20 of 57
            Pseudo Genes (multiple problems)  :: 9 of 57
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1309936
                     /organism="Fructilactobacillus sanfranciscensis"
                     /mol_type="genomic DNA"
                     /strain="TMW11304"
                     /isolation_source="sourdough"
                     /db_xref="taxon:1625"
                     /geo_loc_name="Germany: Freising"
                     /collection_date="2015"
WGS         SCES01000001-SCES01000044
WGS_SCAFLD  NZ_SCES01000001-NZ_SCES01000044
//
LOCUS       NZ_JBJLXB010000000   4973683 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 157 F7, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLXB000000000
VERSION     NZ_JBJLXB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114923
            Assembly: GCF_045800765.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4973683)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLXB000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLXB000000000.  This version of the project
            (01) has the accession number NZ_JBJLXB010000000, and consists of
            sequences JBJLXB010000001-JBJLXB010000153.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800765.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:56:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,986
            CDSs (total)                      :: 4,884
            Genes (coding)                    :: 4,666
            CDSs (with protein)               :: 4,666
            Genes (RNA)                       :: 102
            rRNAs                             :: 7, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 5, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 218
            CDSs (without protein)            :: 218
            Pseudo Genes (ambiguous residues) :: 0 of 218
            Pseudo Genes (frameshifted)       :: 65 of 218
            Pseudo Genes (incomplete)         :: 155 of 218
            Pseudo Genes (internal stop)      :: 38 of 218
            Pseudo Genes (multiple problems)  :: 36 of 218
            Pseudo Genes (short protein)      :: 1 of 218
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4973683
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="157 F7"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2017-12-03"
WGS         JBJLXB010000001-JBJLXB010000153
WGS_SCAFLD  NZ_JBJLXB010000001-NZ_JBJLXB010000153
//
LOCUS       NZ_JBBISS010000000   6030557 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Fischerella thermalis ESF170215 isolate ESF170215_bin_379,
            whole genome shotgun sequencing project.
ACCESSION   NZ_JBBISS000000000
VERSION     NZ_JBBISS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN31096770
            Assembly: GCF_037441205.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Fischerella thermalis ESF170215 (subsurface metagenome)
  ORGANISM  Fischerella thermalis ESF170215
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Hapalosiphonaceae; Fischerella.
REFERENCE   1  (bases 1 to 6030557)
  AUTHORS   Rogers,T.J., Buongiorno,J., Jessen,G.L., Schrenk,M.O.,
            Fordyce,J.A., de Moor,J.M., Ramirez,C.J., Barry,P.H., Yucel,M.,
            Selci,M., Cordone,A., Giovannelli,D. and Lloyd,K.G.
  TITLE     Chemolithoautotroph distributions across the subsurface of a
            convergent margin
  JOURNAL   ISME J 17 (1), 140-150 (2023)
   PUBMED   36257972
REFERENCE   2  (bases 1 to 6030557)
  AUTHORS   Rogers,T.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-OCT-2022) Microbiology, University of Tennessee, 1311
            Cumberland Avenue, Knoxville, TN 37996, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBBISS000000000.1.
            The Fischerella thermalis ESF170215 whole genome shotgun (WGS)
            project has the project accession NZ_JBBISS000000000.  This version
            of the project (01) has the accession number NZ_JBBISS010000000,
            and consists of sequences JBBISS010000001-JBBISS010000159.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 27-MAR-2019
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037441205.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,204
            CDSs (total)                      :: 5,154
            Genes (coding)                    :: 4,995
            CDSs (with protein)               :: 4,995
            Genes (RNA)                       :: 50
            rRNAs                             :: 4, 1 (5S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 159
            CDSs (without protein)            :: 159
            Pseudo Genes (ambiguous residues) :: 0 of 159
            Pseudo Genes (frameshifted)       :: 28 of 159
            Pseudo Genes (incomplete)         :: 130 of 159
            Pseudo Genes (internal stop)      :: 20 of 159
            Pseudo Genes (multiple problems)  :: 16 of 159
            CRISPR Arrays                     :: 6
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6030557
                     /organism="Fischerella thermalis ESF170215"
                     /mol_type="genomic DNA"
                     /isolate="ESF170215_bin_379"
                     /isolation_source="fluid and sediments from hot springs
                     and volcanic lakes"
                     /db_xref="taxon:2983698"
                     /environmental_sample
                     /geo_loc_name="Costa Rica"
                     /collection_date="2017-02"
                     /metagenome_source="subsurface metagenome"
                     /metagenomic
WGS         JBBISS010000001-JBBISS010000159
WGS_SCAFLD  NZ_JBBISS010000001-NZ_JBBISS010000159
//
LOCUS       NZ_SCEY01000000      1281500 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Fructilactobacillus sanfranciscensis strain TMW1907, whole genome
            shotgun sequencing project.
ACCESSION   NZ_SCEY00000000
VERSION     NZ_SCEY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10744007
            Assembly: GCF_010377255.1
KEYWORDS    WGS; RefSeq.
SOURCE      Fructilactobacillus sanfranciscensis
  ORGANISM  Fructilactobacillus sanfranciscensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Fructilactobacillus.
REFERENCE   1  (bases 1 to 1281500)
  AUTHORS   Rogalski,E., Vogel,R.F. and Ehrmann,M.A.
  TITLE     Monitoring of Lactobacillus sanfranciscensis strains during wheat
            and rye sourdough fermentations by CRISPR locus length polymorphism
            PCR
  JOURNAL   Int J Food Microbiol 316, 108475 (2020)
   PUBMED   31874326
REFERENCE   2  (bases 1 to 1281500)
  AUTHORS   Rogalski,E. and Vogel,R.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JAN-2019) Technische Mikrobiologie, Technische
            Universitaet Muenchen, Gregor-Mendel Str. 4, Freising 85354,
            Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SCEY00000000.1.
            The Fructilactobacillus sanfranciscensis whole genome shotgun (WGS)
            project has the project accession NZ_SCEY00000000.  This version of
            the project (01) has the accession number NZ_SCEY01000000, and
            consists of sequences SCEY01000001-SCEY01000050.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 185x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_010377255.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:50:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,373
            CDSs (total)                      :: 1,343
            Genes (coding)                    :: 1,295
            CDSs (with protein)               :: 1,295
            Genes (RNA)                       :: 30
            tRNAs                             :: 27
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 48
            CDSs (without protein)            :: 48
            Pseudo Genes (ambiguous residues) :: 0 of 48
            Pseudo Genes (frameshifted)       :: 16 of 48
            Pseudo Genes (incomplete)         :: 28 of 48
            Pseudo Genes (internal stop)      :: 14 of 48
            Pseudo Genes (multiple problems)  :: 10 of 48
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1281500
                     /organism="Fructilactobacillus sanfranciscensis"
                     /mol_type="genomic DNA"
                     /strain="TMW1907"
                     /isolation_source="sourdough"
                     /db_xref="taxon:1625"
                     /geo_loc_name="Greece: Athens"
                     /collection_date="2015"
WGS         SCEY01000001-SCEY01000050
WGS_SCAFLD  NZ_SCEY01000001-NZ_SCEY01000050
//
LOCUS       NZ_JABXTA010000000   4864637 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia fergusonii strain RHB30-C01, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JABXTA000000000
VERSION     NZ_JABXTA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN15148286
            Assembly: GCF_014104915.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia fergusonii
  ORGANISM  Escherichia fergusonii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4864637)
  AUTHORS   AbuOun,M., Jones,H., Stubberfield,E., Gilson,D., Shaw,L.P.,
            Hubbard,A.T.M., Chau,K.K., Sebra,R., Peto,T.E.A., Crook,D.W.,
            Read,D.S., Gweon,H.S., Walker,A.S., Stoesser,N., Smith,R.P.,
            Anjum,M.F. and On Behalf Of The Rehab,Consortium.
  TITLE     A genomic epidemiological study shows that prevalence of
            antimicrobial resistance in Enterobacterales is associated with the
            livestock host, as well as antimicrobial usage
  JOURNAL   Microb Genom 7 (10) (2021)
   PUBMED   34609275
REFERENCE   2  (bases 1 to 4864637)
  AUTHORS   Shaw,L.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUN-2020) Nuffield Department of Medicine, University
            of Oxford, John Radcliffe Hospital, Oxford OX3 9DU, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JABXTA000000000.1.
            The Escherichia fergusonii whole genome shotgun (WGS) project has
            the project accession NZ_JABXTA000000000.  This version of the
            project (01) has the accession number NZ_JABXTA010000000, and
            consists of sequences JABXTA010000001-JABXTA010000025.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 149.452022017787x
            Sequencing Technology  :: Illumina; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_014104915.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:41:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,724
            CDSs (total)                      :: 4,611
            Genes (coding)                    :: 4,520
            CDSs (with protein)               :: 4,520
            Genes (RNA)                       :: 113
            rRNAs                             :: 7, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 91
            CDSs (without protein)            :: 91
            Pseudo Genes (ambiguous residues) :: 0 of 91
            Pseudo Genes (frameshifted)       :: 24 of 91
            Pseudo Genes (incomplete)         :: 62 of 91
            Pseudo Genes (internal stop)      :: 17 of 91
            Pseudo Genes (multiple problems)  :: 11 of 91
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4864637
                     /organism="Escherichia fergusonii"
                     /mol_type="genomic DNA"
                     /strain="RHB30-C01"
                     /isolation_source="Pooled pig fecal samples collected from
                     floor of farm"
                     /db_xref="taxon:564"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2017"
WGS         JABXTA010000001-JABXTA010000025
WGS_SCAFLD  NZ_JABXTA010000001-NZ_JABXTA010000025
//
LOCUS       NZ_JAACLE010000000   1799146 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Francisella tularensis subsp. holarctica strain 16T1169, whole
            genome shotgun sequencing project.
ACCESSION   NZ_JAACLE000000000
VERSION     NZ_JAACLE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12990535
            Assembly: GCF_009939375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Francisella tularensis subsp. holarctica
  ORGANISM  Francisella tularensis subsp. holarctica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Thiotrichales; Francisellaceae; Francisella.
REFERENCE   1  (bases 1 to 1799146)
  AUTHORS   Meierhofer,D., Reinert,K., Andreotti,S. and Witt,N.
  TITLE     Rapid and culture free identification of Francisella in hare
            carcasses by high-resolution mass spectrometry
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1799146)
  AUTHORS   Neubert,K., Busch,A. and Tomaso,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-NOV-2019) IBIZ, Friedrich-Loeffler-Institut,
            Naumburger Str 96a, Jena 07749, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAACLE000000000.1.
            The Francisella tularensis subsp. holarctica whole genome shotgun
            (WGS) project has the project accession NZ_JAACLE000000000.  This
            version of the project (01) has the accession number
            NZ_JAACLE010000000, and consists of sequences
            JAACLE010000001-JAACLE010000108.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2018
            Assembly Method        :: SPAdes v. 2018-01-01
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009939375.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:49:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,000
            CDSs (total)                      :: 1,955
            Genes (coding)                    :: 1,564
            CDSs (with protein)               :: 1,564
            Genes (RNA)                       :: 45
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 34
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 391
            CDSs (without protein)            :: 391
            Pseudo Genes (ambiguous residues) :: 0 of 391
            Pseudo Genes (frameshifted)       :: 147 of 391
            Pseudo Genes (incomplete)         :: 216 of 391
            Pseudo Genes (internal stop)      :: 96 of 391
            Pseudo Genes (multiple problems)  :: 61 of 391
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1799146
                     /organism="Francisella tularensis subsp. holarctica"
                     /mol_type="genomic DNA"
                     /strain="16T1169"
                     /host="Lepus europaeus"
                     /sub_species="holarctica"
                     /db_xref="taxon:119857"
                     /geo_loc_name="Germany"
                     /collection_date="2016"
                     /collected_by="Friedrich-Loeffler-Institut, IBIZ, Germany"
WGS         JAACLE010000001-JAACLE010000108
WGS_SCAFLD  NZ_JAACLE010000001-NZ_JAACLE010000108
//
LOCUS       NZ_JBJLZQ010000000   4641183 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 276 C7, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLZQ000000000
VERSION     NZ_JBJLZQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114994
            Assembly: GCF_045800195.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4641183)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLZQ000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLZQ000000000.  This version of the project
            (01) has the accession number NZ_JBJLZQ010000000, and consists of
            sequences JBJLZQ010000001-JBJLZQ010000156.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800195.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:42:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,536
            CDSs (total)                      :: 4,437
            Genes (coding)                    :: 4,228
            CDSs (with protein)               :: 4,228
            Genes (RNA)                       :: 99
            rRNAs                             :: 6, 4, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 4, 3, 5 (5S, 16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 209
            CDSs (without protein)            :: 209
            Pseudo Genes (ambiguous residues) :: 0 of 209
            Pseudo Genes (frameshifted)       :: 61 of 209
            Pseudo Genes (incomplete)         :: 141 of 209
            Pseudo Genes (internal stop)      :: 42 of 209
            Pseudo Genes (multiple problems)  :: 30 of 209
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4641183
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="276 C7"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2020-12-31"
WGS         JBJLZQ010000001-JBJLZQ010000156
WGS_SCAFLD  NZ_JBJLZQ010000001-NZ_JBJLZQ010000156
//
LOCUS       NZ_JAACKM010000000   1798860 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Francisella tularensis subsp. holarctica strain 16T0017, whole
            genome shotgun sequencing project.
ACCESSION   NZ_JAACKM000000000
VERSION     NZ_JAACKM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12990517
            Assembly: GCF_009939455.1
KEYWORDS    WGS; RefSeq.
SOURCE      Francisella tularensis subsp. holarctica
  ORGANISM  Francisella tularensis subsp. holarctica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Thiotrichales; Francisellaceae; Francisella.
REFERENCE   1  (bases 1 to 1798860)
  AUTHORS   Meierhofer,D., Reinert,K., Andreotti,S. and Witt,N.
  TITLE     Rapid and culture free identification of Francisella in hare
            carcasses by high-resolution mass spectrometry
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1798860)
  AUTHORS   Neubert,K., Busch,A. and Tomaso,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-NOV-2019) IBIZ, Friedrich-Loeffler-Institut,
            Naumburger Str 96a, Jena 07749, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAACKM000000000.1.
            The Francisella tularensis subsp. holarctica whole genome shotgun
            (WGS) project has the project accession NZ_JAACKM000000000.  This
            version of the project (01) has the accession number
            NZ_JAACKM010000000, and consists of sequences
            JAACKM010000001-JAACKM010000107.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2018
            Assembly Method        :: SPAdes v. 2018-01-01
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009939455.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:45:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,955
            CDSs (total)                      :: 1,910
            Genes (coding)                    :: 1,609
            CDSs (with protein)               :: 1,609
            Genes (RNA)                       :: 45
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 34
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 301
            CDSs (without protein)            :: 301
            Pseudo Genes (ambiguous residues) :: 0 of 301
            Pseudo Genes (frameshifted)       :: 147 of 301
            Pseudo Genes (incomplete)         :: 123 of 301
            Pseudo Genes (internal stop)      :: 98 of 301
            Pseudo Genes (multiple problems)  :: 61 of 301
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1798860
                     /organism="Francisella tularensis subsp. holarctica"
                     /mol_type="genomic DNA"
                     /strain="16T0017"
                     /host="Lepus europaeus"
                     /sub_species="holarctica"
                     /db_xref="taxon:119857"
                     /geo_loc_name="Germany"
                     /collection_date="2016"
                     /collected_by="Friedrich-Loeffler-Institut, IBIZ, Germany"
WGS         JAACKM010000001-JAACKM010000107
WGS_SCAFLD  NZ_JAACKM010000001-NZ_JAACKM010000107
//
LOCUS       NZ_SCER01000000      1264120 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Fructilactobacillus sanfranciscensis strain TMW11470, whole genome
            shotgun sequencing project.
ACCESSION   NZ_SCER00000000
VERSION     NZ_SCER00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10744014
            Assembly: GCF_010377135.1
KEYWORDS    WGS; RefSeq.
SOURCE      Fructilactobacillus sanfranciscensis
  ORGANISM  Fructilactobacillus sanfranciscensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Fructilactobacillus.
REFERENCE   1  (bases 1 to 1264120)
  AUTHORS   Rogalski,E., Vogel,R.F. and Ehrmann,M.A.
  TITLE     Monitoring of Lactobacillus sanfranciscensis strains during wheat
            and rye sourdough fermentations by CRISPR locus length polymorphism
            PCR
  JOURNAL   Int J Food Microbiol 316, 108475 (2020)
   PUBMED   31874326
REFERENCE   2  (bases 1 to 1264120)
  AUTHORS   Rogalski,E. and Vogel,R.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JAN-2019) Technische Mikrobiologie, Technische
            Universitaet Muenchen, Gregor-Mendel Str. 4, Freising 85354,
            Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SCER00000000.1.
            The Fructilactobacillus sanfranciscensis whole genome shotgun (WGS)
            project has the project accession NZ_SCER00000000.  This version of
            the project (01) has the accession number NZ_SCER01000000, and
            consists of sequences SCER01000001-SCER01000018.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 175x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_010377135.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:42:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,355
            CDSs (total)                      :: 1,289
            Genes (coding)                    :: 1,241
            CDSs (with protein)               :: 1,241
            Genes (RNA)                       :: 66
            rRNAs                             :: 8, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 1 (5S, 16S)
            partial rRNAs                     :: 3, 2 (16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 48
            CDSs (without protein)            :: 48
            Pseudo Genes (ambiguous residues) :: 0 of 48
            Pseudo Genes (frameshifted)       :: 15 of 48
            Pseudo Genes (incomplete)         :: 25 of 48
            Pseudo Genes (internal stop)      :: 13 of 48
            Pseudo Genes (multiple problems)  :: 5 of 48
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1264120
                     /organism="Fructilactobacillus sanfranciscensis"
                     /mol_type="genomic DNA"
                     /strain="TMW11470"
                     /isolation_source="sourdough"
                     /db_xref="taxon:1625"
                     /geo_loc_name="Germany: Hohenheim"
                     /collection_date="2015"
WGS         SCER01000001-SCER01000018
WGS_SCAFLD  NZ_SCER01000001-NZ_SCER01000018
//
LOCUS       NZ_SCEQ01000000      1307874 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Fructilactobacillus sanfranciscensis strain TMW11730, whole genome
            shotgun sequencing project.
ACCESSION   NZ_SCEQ00000000
VERSION     NZ_SCEQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10744015
            Assembly: GCF_010377125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Fructilactobacillus sanfranciscensis
  ORGANISM  Fructilactobacillus sanfranciscensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Fructilactobacillus.
REFERENCE   1  (bases 1 to 1307874)
  AUTHORS   Rogalski,E., Vogel,R.F. and Ehrmann,M.A.
  TITLE     Monitoring of Lactobacillus sanfranciscensis strains during wheat
            and rye sourdough fermentations by CRISPR locus length polymorphism
            PCR
  JOURNAL   Int J Food Microbiol 316, 108475 (2020)
   PUBMED   31874326
REFERENCE   2  (bases 1 to 1307874)
  AUTHORS   Rogalski,E. and Vogel,R.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JAN-2019) Technische Mikrobiologie, Technische
            Universitaet Muenchen, Gregor-Mendel Str. 4, Freising 85354,
            Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SCEQ00000000.1.
            The Fructilactobacillus sanfranciscensis whole genome shotgun (WGS)
            project has the project accession NZ_SCEQ00000000.  This version of
            the project (01) has the accession number NZ_SCEQ01000000, and
            consists of sequences SCEQ01000001-SCEQ01000044.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 190x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_010377125.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:45:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,431
            CDSs (total)                      :: 1,365
            Genes (coding)                    :: 1,306
            CDSs (with protein)               :: 1,306
            Genes (RNA)                       :: 66
            rRNAs                             :: 7, 5, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 5 (5S)
            partial rRNAs                     :: 2, 5, 2 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 20 of 59
            Pseudo Genes (incomplete)         :: 30 of 59
            Pseudo Genes (internal stop)      :: 20 of 59
            Pseudo Genes (multiple problems)  :: 9 of 59
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1307874
                     /organism="Fructilactobacillus sanfranciscensis"
                     /mol_type="genomic DNA"
                     /strain="TMW11730"
                     /isolation_source="sourdough"
                     /db_xref="taxon:1625"
                     /geo_loc_name="Germany: Minden"
                     /collection_date="2015"
WGS         SCEQ01000001-SCEQ01000044
WGS_SCAFLD  NZ_SCEQ01000001-NZ_SCEQ01000044
//
LOCUS       NZ_SCEV01000000      1253076 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Fructilactobacillus sanfranciscensis strain TMW11152, whole genome
            shotgun sequencing project.
ACCESSION   NZ_SCEV00000000
VERSION     NZ_SCEV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10744010
            Assembly: GCF_010377225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Fructilactobacillus sanfranciscensis
  ORGANISM  Fructilactobacillus sanfranciscensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Fructilactobacillus.
REFERENCE   1  (bases 1 to 1253076)
  AUTHORS   Rogalski,E., Vogel,R.F. and Ehrmann,M.A.
  TITLE     Monitoring of Lactobacillus sanfranciscensis strains during wheat
            and rye sourdough fermentations by CRISPR locus length polymorphism
            PCR
  JOURNAL   Int J Food Microbiol 316, 108475 (2020)
   PUBMED   31874326
REFERENCE   2  (bases 1 to 1253076)
  AUTHORS   Rogalski,E. and Vogel,R.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JAN-2019) Technische Mikrobiologie, Technische
            Universitaet Muenchen, Gregor-Mendel Str. 4, Freising 85354,
            Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SCEV00000000.1.
            The Fructilactobacillus sanfranciscensis whole genome shotgun (WGS)
            project has the project accession NZ_SCEV00000000.  This version of
            the project (01) has the accession number NZ_SCEV01000000, and
            consists of sequences SCEV01000001-SCEV01000033.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 210x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_010377225.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:44:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,326
            CDSs (total)                      :: 1,275
            Genes (coding)                    :: 1,225
            CDSs (with protein)               :: 1,225
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 12 of 50
            Pseudo Genes (incomplete)         :: 28 of 50
            Pseudo Genes (internal stop)      :: 21 of 50
            Pseudo Genes (multiple problems)  :: 10 of 50
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1253076
                     /organism="Fructilactobacillus sanfranciscensis"
                     /mol_type="genomic DNA"
                     /strain="TMW11152"
                     /isolation_source="sourdough"
                     /db_xref="taxon:1625"
                     /geo_loc_name="USA"
                     /collection_date="2015"
WGS         SCEV01000001-SCEV01000033
WGS_SCAFLD  NZ_SCEV01000001-NZ_SCEV01000033
//
LOCUS       NZ_CAYTBP010000000   5490806 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain Kpn02028 isolate Kpn02028, whole
            genome shotgun sequencing project.
ACCESSION   NZ_CAYTBP000000000
VERSION     NZ_CAYTBP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117477667
            Assembly: GCF_964436065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5490806)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2024) Universitaetsklinikum Freiburg, Institute
            for infection prevention and control, Breisacher Strasse 115B,
            79106 Freiburg, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAYTBP000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_CAYTBP000000000.  This version of the
            project (01) has the accession number NZ_CAYTBP010000000, and
            consists of sequences CAYTBP010000001-CAYTBP010000044.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964436065.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:35:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,414
            CDSs (total)                      :: 5,314
            Genes (coding)                    :: 5,209
            CDSs (with protein)               :: 5,209
            Genes (RNA)                       :: 100
            rRNAs                             :: 6, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 5 (5S)
            partial rRNAs                     :: 1, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 47 of 105
            Pseudo Genes (incomplete)         :: 65 of 105
            Pseudo Genes (internal stop)      :: 19 of 105
            Pseudo Genes (multiple problems)  :: 23 of 105
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5490806
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="Kpn02028"
                     /isolate="Kpn02028"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Germany"
                     /lat_lon="47.99 N 7.84 E"
                     /collection_date="2019"
WGS         CAYTBP010000001-CAYTBP010000044
WGS_SCAFLD  NZ_CAYTBP010000001-NZ_CAYTBP010000044
//
LOCUS       NZ_JAACKO010000000   1799817 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Francisella tularensis subsp. holarctica strain 16T0022, whole
            genome shotgun sequencing project.
ACCESSION   NZ_JAACKO000000000
VERSION     NZ_JAACKO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12990519
            Assembly: GCF_009939425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Francisella tularensis subsp. holarctica
  ORGANISM  Francisella tularensis subsp. holarctica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Thiotrichales; Francisellaceae; Francisella.
REFERENCE   1  (bases 1 to 1799817)
  AUTHORS   Meierhofer,D., Reinert,K., Andreotti,S. and Witt,N.
  TITLE     Rapid and culture free identification of Francisella in hare
            carcasses by high-resolution mass spectrometry
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1799817)
  AUTHORS   Neubert,K., Busch,A. and Tomaso,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-NOV-2019) IBIZ, Friedrich-Loeffler-Institut,
            Naumburger Str 96a, Jena 07749, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAACKO000000000.1.
            The Francisella tularensis subsp. holarctica whole genome shotgun
            (WGS) project has the project accession NZ_JAACKO000000000.  This
            version of the project (01) has the accession number
            NZ_JAACKO010000000, and consists of sequences
            JAACKO010000001-JAACKO010000103.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2018
            Assembly Method        :: SPAdes v. 2018-01-01
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009939425.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:46:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,980
            CDSs (total)                      :: 1,935
            Genes (coding)                    :: 1,603
            CDSs (with protein)               :: 1,603
            Genes (RNA)                       :: 45
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 34
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 332
            CDSs (without protein)            :: 332
            Pseudo Genes (ambiguous residues) :: 0 of 332
            Pseudo Genes (frameshifted)       :: 149 of 332
            Pseudo Genes (incomplete)         :: 152 of 332
            Pseudo Genes (internal stop)      :: 100 of 332
            Pseudo Genes (multiple problems)  :: 62 of 332
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1799817
                     /organism="Francisella tularensis subsp. holarctica"
                     /mol_type="genomic DNA"
                     /strain="16T0022"
                     /host="Lepus europaeus"
                     /sub_species="holarctica"
                     /db_xref="taxon:119857"
                     /geo_loc_name="Germany"
                     /collection_date="2016"
                     /collected_by="Friedrich-Loeffler-Institut, IBIZ, Germany"
WGS         JAACKO010000001-JAACKO010000103
WGS_SCAFLD  NZ_JAACKO010000001-NZ_JAACKO010000103
//
LOCUS       NZ_SCET01000000      1256830 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Fructilactobacillus sanfranciscensis strain TMW11221, whole genome
            shotgun sequencing project.
ACCESSION   NZ_SCET00000000
VERSION     NZ_SCET00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10744012
            Assembly: GCF_010377165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Fructilactobacillus sanfranciscensis
  ORGANISM  Fructilactobacillus sanfranciscensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Fructilactobacillus.
REFERENCE   1  (bases 1 to 1256830)
  AUTHORS   Rogalski,E., Vogel,R.F. and Ehrmann,M.A.
  TITLE     Monitoring of Lactobacillus sanfranciscensis strains during wheat
            and rye sourdough fermentations by CRISPR locus length polymorphism
            PCR
  JOURNAL   Int J Food Microbiol 316, 108475 (2020)
   PUBMED   31874326
REFERENCE   2  (bases 1 to 1256830)
  AUTHORS   Rogalski,E. and Vogel,R.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JAN-2019) Technische Mikrobiologie, Technische
            Universitaet Muenchen, Gregor-Mendel Str. 4, Freising 85354,
            Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SCET00000000.1.
            The Fructilactobacillus sanfranciscensis whole genome shotgun (WGS)
            project has the project accession NZ_SCET00000000.  This version of
            the project (01) has the accession number NZ_SCET01000000, and
            consists of sequences SCET01000001-SCET01000059.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 139x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_010377165.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:42:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,312
            CDSs (total)                      :: 1,273
            Genes (coding)                    :: 1,225
            CDSs (with protein)               :: 1,225
            Genes (RNA)                       :: 39
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 48
            CDSs (without protein)            :: 48
            Pseudo Genes (ambiguous residues) :: 0 of 48
            Pseudo Genes (frameshifted)       :: 19 of 48
            Pseudo Genes (incomplete)         :: 26 of 48
            Pseudo Genes (internal stop)      :: 11 of 48
            Pseudo Genes (multiple problems)  :: 7 of 48
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1256830
                     /organism="Fructilactobacillus sanfranciscensis"
                     /mol_type="genomic DNA"
                     /strain="TMW11221"
                     /isolation_source="sourdough"
                     /db_xref="taxon:1625"
                     /geo_loc_name="France: Nantes"
                     /collection_date="2015"
WGS         SCET01000001-SCET01000059
WGS_SCAFLD  NZ_SCET01000001-NZ_SCET01000059
//
LOCUS       NZ_JBJLWV010000000   5120341 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 130 G2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLWV000000000
VERSION     NZ_JBJLWV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114917
            Assembly: GCF_045800775.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5120341)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLWV000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLWV000000000.  This version of the project
            (01) has the accession number NZ_JBJLWV010000000, and consists of
            sequences JBJLWV010000001-JBJLWV010000186.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800775.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 14:09:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,156
            CDSs (total)                      :: 5,050
            Genes (coding)                    :: 4,769
            CDSs (with protein)               :: 4,769
            Genes (RNA)                       :: 106
            rRNAs                             :: 6, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 2, 4 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 281
            CDSs (without protein)            :: 281
            Pseudo Genes (ambiguous residues) :: 0 of 281
            Pseudo Genes (frameshifted)       :: 75 of 281
            Pseudo Genes (incomplete)         :: 204 of 281
            Pseudo Genes (internal stop)      :: 51 of 281
            Pseudo Genes (multiple problems)  :: 43 of 281
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5120341
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="130 G2"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2015-04-20"
WGS         JBJLWV010000001-JBJLWV010000186
WGS_SCAFLD  NZ_JBJLWV010000001-NZ_JBJLWV010000186
//
LOCUS       NZ_JBJLYT010000000   4817282 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 255 I2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLYT000000000
VERSION     NZ_JBJLYT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114971
            Assembly: GCF_045800035.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4817282)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLYT000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLYT000000000.  This version of the project
            (01) has the accession number NZ_JBJLYT010000000, and consists of
            sequences JBJLYT010000001-JBJLYT010000100.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800035.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:30:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,787
            CDSs (total)                      :: 4,689
            Genes (coding)                    :: 4,458
            CDSs (with protein)               :: 4,458
            Genes (RNA)                       :: 98
            rRNAs                             :: 5, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 231
            CDSs (without protein)            :: 231
            Pseudo Genes (ambiguous residues) :: 0 of 231
            Pseudo Genes (frameshifted)       :: 72 of 231
            Pseudo Genes (incomplete)         :: 171 of 231
            Pseudo Genes (internal stop)      :: 36 of 231
            Pseudo Genes (multiple problems)  :: 44 of 231
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4817282
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="255 I2"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2020-03-05"
WGS         JBJLYT010000001-JBJLYT010000100
WGS_SCAFLD  NZ_JBJLYT010000001-NZ_JBJLYT010000100
//
LOCUS       NZ_JBIGNS010000000   5668668 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E280, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGNS000000000
VERSION     NZ_JBIGNS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130612
            Assembly: GCF_045572655.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5668668)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGNS000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGNS000000000.  This version of the
            project (01) has the accession number NZ_JBIGNS010000000, and
            consists of sequences JBIGNS010000001-JBIGNS010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 338x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045572655.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:49:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,637
            CDSs (total)                      :: 5,514
            Genes (coding)                    :: 5,365
            CDSs (with protein)               :: 5,365
            Genes (RNA)                       :: 123
            rRNAs                             :: 9, 9, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 8 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 149
            CDSs (without protein)            :: 149
            Pseudo Genes (ambiguous residues) :: 0 of 149
            Pseudo Genes (frameshifted)       :: 75 of 149
            Pseudo Genes (incomplete)         :: 78 of 149
            Pseudo Genes (internal stop)      :: 20 of 149
            Pseudo Genes (multiple problems)  :: 22 of 149
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5668668
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E280"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGNS010000001-JBIGNS010000007
WGS_SCAFLD  NZ_JBIGNS010000001-NZ_JBIGNS010000007
//
LOCUS       NZ_JBJLYR010000000   4993866 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 255 H10, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLYR000000000
VERSION     NZ_JBJLYR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114969
            Assembly: GCF_045800275.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4993866)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLYR000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLYR000000000.  This version of the project
            (01) has the accession number NZ_JBJLYR010000000, and consists of
            sequences JBJLYR010000001-JBJLYR010000113.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 148x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800275.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:54:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,017
            CDSs (total)                      :: 4,914
            Genes (coding)                    :: 4,672
            CDSs (with protein)               :: 4,672
            Genes (RNA)                       :: 103
            rRNAs                             :: 7, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 5, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 242
            CDSs (without protein)            :: 242
            Pseudo Genes (ambiguous residues) :: 0 of 242
            Pseudo Genes (frameshifted)       :: 77 of 242
            Pseudo Genes (incomplete)         :: 156 of 242
            Pseudo Genes (internal stop)      :: 48 of 242
            Pseudo Genes (multiple problems)  :: 34 of 242
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4993866
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="255 H10"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2020-02-13"
WGS         JBJLYR010000001-JBJLYR010000113
WGS_SCAFLD  NZ_JBJLYR010000001-NZ_JBJLYR010000113
//
LOCUS       NZ_JBWBUX010000000   3152785 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Exiguobacterium sp. QJM3NY_9, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWBUX000000000
VERSION     NZ_JBWBUX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449755
            Assembly: GCF_056173545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Exiguobacterium sp. QJM3NY_9
  ORGANISM  Exiguobacterium sp. QJM3NY_9
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillales
            Family XII. Incertae Sedis; Exiguobacterium.
REFERENCE   1  (bases 1 to 3152785)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3152785)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBUX000000000.1.
            The Exiguobacterium sp. QJM3NY_9 whole genome shotgun (WGS) project
            has the project accession NZ_JBWBUX000000000.  This version of the
            project (01) has the accession number NZ_JBWBUX010000000, and
            consists of sequences JBWBUX010000001-JBWBUX010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 352.4x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173545.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:57:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,194
            CDSs (total)                      :: 3,094
            Genes (coding)                    :: 3,068
            CDSs (with protein)               :: 3,068
            Genes (RNA)                       :: 100
            rRNAs                             :: 9, 9, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 9 (5S, 16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 12 of 26
            Pseudo Genes (incomplete)         :: 14 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            Pseudo Genes (multiple problems)  :: 4 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3152785
                     /organism="Exiguobacterium sp. QJM3NY_9"
                     /mol_type="genomic DNA"
                     /strain="QJM3NY_9"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569815"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBUX010000001-JBWBUX010000004
WGS_SCAFLD  NZ_CM149679
WGS_SCAFLD  NZ_JBWBUX010000002-NZ_JBWBUX010000004
//
LOCUS       NZ_JAVTTM010000000   4893839 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain GDSC2241PM, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAVTTM000000000
VERSION     NZ_JAVTTM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37519745
            Assembly: GCF_045798985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4893839)
  AUTHORS   Lv,L. and Liu,J.-H.
  TITLE     Emergence of blaNDM-5-bearing IncHI2/ST2 and p0111
            multidrug-resistance plasmids and wide spread of
            IncHI2/ST3-blaNDM-5 plasmid
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4893839)
  AUTHORS   Lv,L. and Liu,J.-H.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-SEP-2023) College of Veterinary Medicine, South China
            Agricultural University, Wushan, Guangzhou, Guangdong 510642, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAVTTM000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JAVTTM000000000.  This version of the project
            (01) has the accession number NZ_JAVTTM010000000, and consists of
            sequences JAVTTM010000001-JAVTTM010000168.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 22-SEP-2023
            Assembly Method        :: SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045798985.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:32:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,973
            CDSs (total)                      :: 4,868
            Genes (coding)                    :: 4,612
            CDSs (with protein)               :: 4,612
            Genes (RNA)                       :: 105
            rRNAs                             :: 7, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 5, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 256
            CDSs (without protein)            :: 256
            Pseudo Genes (ambiguous residues) :: 0 of 256
            Pseudo Genes (frameshifted)       :: 65 of 256
            Pseudo Genes (incomplete)         :: 185 of 256
            Pseudo Genes (internal stop)      :: 35 of 256
            Pseudo Genes (multiple problems)  :: 26 of 256
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4893839
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="GDSC2241PM"
                     /isolation_source="vegetable"
                     /db_xref="taxon:562"
                     /geo_loc_name="China: Guangzhou"
                     /collection_date="2021"
WGS         JAVTTM010000001-JAVTTM010000168
WGS_SCAFLD  NZ_JAVTTM010000001-NZ_JAVTTM010000168
//
LOCUS       NZ_JBIGPM010000000   5649703 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E193, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGPM000000000
VERSION     NZ_JBIGPM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130539
            Assembly: GCF_045573665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5649703)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGPM000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGPM000000000.  This version of the
            project (01) has the accession number NZ_JBIGPM010000000, and
            consists of sequences JBIGPM010000001-JBIGPM010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 235x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045573665.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:39:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,668
            CDSs (total)                      :: 5,546
            Genes (coding)                    :: 5,390
            CDSs (with protein)               :: 5,390
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 156
            CDSs (without protein)            :: 156
            Pseudo Genes (ambiguous residues) :: 0 of 156
            Pseudo Genes (frameshifted)       :: 74 of 156
            Pseudo Genes (incomplete)         :: 83 of 156
            Pseudo Genes (internal stop)      :: 18 of 156
            Pseudo Genes (multiple problems)  :: 17 of 156
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5649703
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E193"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGPM010000001-JBIGPM010000008
WGS_SCAFLD  NZ_JBIGPM010000001-NZ_JBIGPM010000008
//
LOCUS       NZ_JBJLYY010000000   4894134 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 268 B10, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLYY000000000
VERSION     NZ_JBJLYY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114976
            Assembly: GCF_045800015.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4894134)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLYY000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLYY000000000.  This version of the project
            (01) has the accession number NZ_JBJLYY010000000, and consists of
            sequences JBJLYY010000001-JBJLYY010000133.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800015.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:55:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,861
            CDSs (total)                      :: 4,758
            Genes (coding)                    :: 4,497
            CDSs (with protein)               :: 4,497
            Genes (RNA)                       :: 103
            rRNAs                             :: 6, 4, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 4, 3, 5 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 261
            CDSs (without protein)            :: 261
            Pseudo Genes (ambiguous residues) :: 0 of 261
            Pseudo Genes (frameshifted)       :: 83 of 261
            Pseudo Genes (incomplete)         :: 176 of 261
            Pseudo Genes (internal stop)      :: 46 of 261
            Pseudo Genes (multiple problems)  :: 37 of 261
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4894134
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="268 B10"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2018-06-04"
WGS         JBJLYY010000001-JBJLYY010000133
WGS_SCAFLD  NZ_JBJLYY010000001-NZ_JBJLYY010000133
//
LOCUS       NZ_JAACKN010000000   1802654 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Francisella tularensis subsp. holarctica strain 16T0021, whole
            genome shotgun sequencing project.
ACCESSION   NZ_JAACKN000000000
VERSION     NZ_JAACKN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12990518
            Assembly: GCF_009939095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Francisella tularensis subsp. holarctica
  ORGANISM  Francisella tularensis subsp. holarctica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Thiotrichales; Francisellaceae; Francisella.
REFERENCE   1  (bases 1 to 1802654)
  AUTHORS   Meierhofer,D., Reinert,K., Andreotti,S. and Witt,N.
  TITLE     Rapid and culture free identification of Francisella in hare
            carcasses by high-resolution mass spectrometry
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1802654)
  AUTHORS   Neubert,K., Busch,A. and Tomaso,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-NOV-2019) IBIZ, Friedrich-Loeffler-Institut,
            Naumburger Str 96a, Jena 07749, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAACKN000000000.1.
            The Francisella tularensis subsp. holarctica whole genome shotgun
            (WGS) project has the project accession NZ_JAACKN000000000.  This
            version of the project (01) has the accession number
            NZ_JAACKN010000000, and consists of sequences
            JAACKN010000001-JAACKN010000103.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2018
            Assembly Method        :: SPAdes v. 2018-01-01
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009939095.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:44:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,941
            CDSs (total)                      :: 1,896
            Genes (coding)                    :: 1,609
            CDSs (with protein)               :: 1,609
            Genes (RNA)                       :: 45
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 34
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 287
            CDSs (without protein)            :: 287
            Pseudo Genes (ambiguous residues) :: 0 of 287
            Pseudo Genes (frameshifted)       :: 143 of 287
            Pseudo Genes (incomplete)         :: 115 of 287
            Pseudo Genes (internal stop)      :: 96 of 287
            Pseudo Genes (multiple problems)  :: 59 of 287
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1802654
                     /organism="Francisella tularensis subsp. holarctica"
                     /mol_type="genomic DNA"
                     /strain="16T0021"
                     /host="Lepus europaeus"
                     /sub_species="holarctica"
                     /db_xref="taxon:119857"
                     /geo_loc_name="Germany"
                     /collection_date="2016"
                     /collected_by="Friedrich-Loeffler-Institut, IBIZ, Germany"
WGS         JAACKN010000001-JAACKN010000103
WGS_SCAFLD  NZ_JAACKN010000001-NZ_JAACKN010000103
//
LOCUS       NZ_JBJLYS010000000   4932986 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 255 I1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLYS000000000
VERSION     NZ_JBJLYS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114970
            Assembly: GCF_045800255.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4932986)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLYS000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLYS000000000.  This version of the project
            (01) has the accession number NZ_JBJLYS010000000, and consists of
            sequences JBJLYS010000001-JBJLYS010000147.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800255.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:44:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,916
            CDSs (total)                      :: 4,814
            Genes (coding)                    :: 4,569
            CDSs (with protein)               :: 4,569
            Genes (RNA)                       :: 102
            rRNAs                             :: 6, 4, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 4, 3, 5 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 245
            CDSs (without protein)            :: 245
            Pseudo Genes (ambiguous residues) :: 0 of 245
            Pseudo Genes (frameshifted)       :: 72 of 245
            Pseudo Genes (incomplete)         :: 175 of 245
            Pseudo Genes (internal stop)      :: 38 of 245
            Pseudo Genes (multiple problems)  :: 35 of 245
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4932986
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="255 I1"
                     /isolation_source="Urines (Colonisation)"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2020-03-10"
WGS         JBJLYS010000001-JBJLYS010000147
WGS_SCAFLD  NZ_JBJLYS010000001-NZ_JBJLYS010000147
//
LOCUS       NZ_JAACKW010000000   1803076 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Francisella tularensis subsp. holarctica strain 16T0055, whole
            genome shotgun sequencing project.
ACCESSION   NZ_JAACKW000000000
VERSION     NZ_JAACKW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12990527
            Assembly: GCF_009939365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Francisella tularensis subsp. holarctica
  ORGANISM  Francisella tularensis subsp. holarctica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Thiotrichales; Francisellaceae; Francisella.
REFERENCE   1  (bases 1 to 1803076)
  AUTHORS   Meierhofer,D., Reinert,K., Andreotti,S. and Witt,N.
  TITLE     Rapid and culture free identification of Francisella in hare
            carcasses by high-resolution mass spectrometry
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1803076)
  AUTHORS   Neubert,K., Busch,A. and Tomaso,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-NOV-2019) IBIZ, Friedrich-Loeffler-Institut,
            Naumburger Str 96a, Jena 07749, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAACKW000000000.1.
            The Francisella tularensis subsp. holarctica whole genome shotgun
            (WGS) project has the project accession NZ_JAACKW000000000.  This
            version of the project (01) has the accession number
            NZ_JAACKW010000000, and consists of sequences
            JAACKW010000001-JAACKW010000107.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2018
            Assembly Method        :: SPAdes v. 2018-01-01
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009939365.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:40:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,944
            CDSs (total)                      :: 1,899
            Genes (coding)                    :: 1,626
            CDSs (with protein)               :: 1,626
            Genes (RNA)                       :: 45
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 34
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 273
            CDSs (without protein)            :: 273
            Pseudo Genes (ambiguous residues) :: 0 of 273
            Pseudo Genes (frameshifted)       :: 145 of 273
            Pseudo Genes (incomplete)         :: 100 of 273
            Pseudo Genes (internal stop)      :: 96 of 273
            Pseudo Genes (multiple problems)  :: 60 of 273
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1803076
                     /organism="Francisella tularensis subsp. holarctica"
                     /mol_type="genomic DNA"
                     /strain="16T0055"
                     /host="Lepus europaeus"
                     /sub_species="holarctica"
                     /db_xref="taxon:119857"
                     /geo_loc_name="Germany"
                     /collection_date="2016"
                     /collected_by="Friedrich-Loeffler-Institut, IBIZ, Germany"
WGS         JAACKW010000001-JAACKW010000107
WGS_SCAFLD  NZ_JAACKW010000001-NZ_JAACKW010000107
//
LOCUS       NZ_JBIGRV010000000   5433166 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E97, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGRV000000000
VERSION     NZ_JBIGRV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130452
            Assembly: GCF_045574785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5433166)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGRV000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGRV000000000.  This version of the
            project (01) has the accession number NZ_JBIGRV010000000, and
            consists of sequences JBIGRV010000001-JBIGRV010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 830x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045574785.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:59:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,323
            CDSs (total)                      :: 5,203
            Genes (coding)                    :: 5,041
            CDSs (with protein)               :: 5,041
            Genes (RNA)                       :: 120
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 162
            CDSs (without protein)            :: 162
            Pseudo Genes (ambiguous residues) :: 0 of 162
            Pseudo Genes (frameshifted)       :: 107 of 162
            Pseudo Genes (incomplete)         :: 62 of 162
            Pseudo Genes (internal stop)      :: 12 of 162
            Pseudo Genes (multiple problems)  :: 18 of 162
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5433166
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E97"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGRV010000001-JBIGRV010000006
WGS_SCAFLD  NZ_JBIGRV010000001-NZ_JBIGRV010000006
//
LOCUS       NZ_SCEW01000000      1254138 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Fructilactobacillus sanfranciscensis strain TMW12134, whole genome
            shotgun sequencing project.
ACCESSION   NZ_SCEW00000000
VERSION     NZ_SCEW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10744009
            Assembly: GCF_010377235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Fructilactobacillus sanfranciscensis
  ORGANISM  Fructilactobacillus sanfranciscensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Fructilactobacillus.
REFERENCE   1  (bases 1 to 1254138)
  AUTHORS   Rogalski,E., Vogel,R.F. and Ehrmann,M.A.
  TITLE     Monitoring of Lactobacillus sanfranciscensis strains during wheat
            and rye sourdough fermentations by CRISPR locus length polymorphism
            PCR
  JOURNAL   Int J Food Microbiol 316, 108475 (2020)
   PUBMED   31874326
REFERENCE   2  (bases 1 to 1254138)
  AUTHORS   Rogalski,E. and Vogel,R.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JAN-2019) Technische Mikrobiologie, Technische
            Universitaet Muenchen, Gregor-Mendel Str. 4, Freising 85354,
            Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SCEW00000000.1.
            The Fructilactobacillus sanfranciscensis whole genome shotgun (WGS)
            project has the project accession NZ_SCEW00000000.  This version of
            the project (01) has the accession number NZ_SCEW01000000, and
            consists of sequences SCEW01000001-SCEW01000038.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 143x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_010377235.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:45:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,374
            CDSs (total)                      :: 1,308
            Genes (coding)                    :: 1,255
            CDSs (with protein)               :: 1,255
            Genes (RNA)                       :: 66
            rRNAs                             :: 7, 5, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 5 (5S)
            partial rRNAs                     :: 2, 5, 2 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 53
            CDSs (without protein)            :: 53
            Pseudo Genes (ambiguous residues) :: 0 of 53
            Pseudo Genes (frameshifted)       :: 19 of 53
            Pseudo Genes (incomplete)         :: 23 of 53
            Pseudo Genes (internal stop)      :: 19 of 53
            Pseudo Genes (multiple problems)  :: 7 of 53
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1254138
                     /organism="Fructilactobacillus sanfranciscensis"
                     /mol_type="genomic DNA"
                     /strain="TMW12134"
                     /isolation_source="sourdough"
                     /db_xref="taxon:1625"
                     /geo_loc_name="Germany"
                     /collection_date="2015"
WGS         SCEW01000001-SCEW01000038
WGS_SCAFLD  NZ_SCEW01000001-NZ_SCEW01000038
//
LOCUS       NZ_JBJLZM010000000   5078238 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 272 A8, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLZM000000000
VERSION     NZ_JBJLZM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114990
            Assembly: GCF_045800415.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5078238)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLZM000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLZM000000000.  This version of the project
            (01) has the accession number NZ_JBJLZM010000000, and consists of
            sequences JBJLZM010000001-JBJLZM010000151.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 86x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800415.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:39:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,099
            CDSs (total)                      :: 4,996
            Genes (coding)                    :: 4,750
            CDSs (with protein)               :: 4,750
            Genes (RNA)                       :: 103
            rRNAs                             :: 6, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 4, 3, 4 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 246
            CDSs (without protein)            :: 246
            Pseudo Genes (ambiguous residues) :: 0 of 246
            Pseudo Genes (frameshifted)       :: 73 of 246
            Pseudo Genes (incomplete)         :: 164 of 246
            Pseudo Genes (internal stop)      :: 44 of 246
            Pseudo Genes (multiple problems)  :: 30 of 246
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5078238
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="272 A8"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2020-03-17"
WGS         JBJLZM010000001-JBJLZM010000151
WGS_SCAFLD  NZ_JBJLZM010000001-NZ_JBJLZM010000151
//
LOCUS       NZ_DATGNU010000000   2874080 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Galbibacter sp. isolate SMAG_U10351, whole genome shotgun
            sequencing project.
ACCESSION   NZ_DATGNU000000000
VERSION     NZ_DATGNU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37957126
            Sequence Read Archive: SRR5690606
            Assembly: GCF_035306585.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq; TPA:assembly.
SOURCE      Galbibacter sp. (soil metagenome)
  ORGANISM  Galbibacter sp.
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Galbibacter.
REFERENCE   1  (bases 1 to 2874080)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. doi:
            10.1038/s41467-023-44072-7. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2874080)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            DATGNU000000000.1.
            The Galbibacter sp. whole genome shotgun (WGS) project has the
            project accession NZ_DATGNU000000000.  This version of the project
            (01) has the accession number NZ_DATGNU010000000, and consists of
            sequences DATGNU010000001-DATGNU010000138.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_035306585.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:39:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,543
            CDSs (total)                      :: 2,497
            Genes (coding)                    :: 2,472
            CDSs (with protein)               :: 2,472
            Genes (RNA)                       :: 46
            rRNAs                             :: 2, 1 (5S, 16S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 39
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 25
            CDSs (without protein)            :: 25
            Pseudo Genes (ambiguous residues) :: 0 of 25
            Pseudo Genes (frameshifted)       :: 2 of 25
            Pseudo Genes (incomplete)         :: 22 of 25
            Pseudo Genes (internal stop)      :: 2 of 25
            Pseudo Genes (multiple problems)  :: 1 of 25
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2874080
                     /organism="Galbibacter sp."
                     /mol_type="genomic DNA"
                     /isolate="SMAG_U10351"
                     /isolation_source="soil"
                     /db_xref="taxon:2918471"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="41.7655 N 111.8143 W"
                     /metagenome_source="soil metagenome"
                     /metagenomic
WGS         DATGNU010000001-DATGNU010000138
WGS_SCAFLD  NZ_DATGNU010000001-NZ_DATGNU010000138
//
LOCUS       NZ_JBIGTT010000000   5325375 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E10, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGTT000000000
VERSION     NZ_JBIGTT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130378
            Assembly: GCF_045575895.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5325375)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGTT000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGTT000000000.  This version of the
            project (01) has the accession number NZ_JBIGTT010000000, and
            consists of sequences JBIGTT010000001-JBIGTT010000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 339x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575895.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:00:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,270
            CDSs (total)                      :: 5,143
            Genes (coding)                    :: 5,030
            CDSs (with protein)               :: 5,030
            Genes (RNA)                       :: 127
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 16
            Pseudo Genes (total)              :: 113
            CDSs (without protein)            :: 113
            Pseudo Genes (ambiguous residues) :: 0 of 113
            Pseudo Genes (frameshifted)       :: 62 of 113
            Pseudo Genes (incomplete)         :: 50 of 113
            Pseudo Genes (internal stop)      :: 17 of 113
            Pseudo Genes (multiple problems)  :: 13 of 113
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5325375
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E10"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGTT010000001-JBIGTT010000004
WGS_SCAFLD  NZ_JBIGTT010000001-NZ_JBIGTT010000004
//
LOCUS       NZ_WCKA01000000      2221062 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Glaesserella parasuis strain H87, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WCKA00000000
VERSION     NZ_WCKA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12920540
            Assembly: GCF_009797225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Glaesserella parasuis (Haemophilus parasuis)
  ORGANISM  Glaesserella parasuis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Glaesserella.
REFERENCE   1  (bases 1 to 2221062)
  AUTHORS   Li,C., Yan,H., Wan,X. and Wang,G.
  TITLE     WGS characterization of a Glaesserella parasuis isolate of H87
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2221062)
  AUTHORS   Li,C., Yan,H., Wan,X. and Wang,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-OCT-2019) School of Food Science and Engineering,
            South China University of Technology, Wushan Road, Guangzhou,
            Guangdong 510640, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WCKA00000000.1.
            The Glaesserella parasuis whole genome shotgun (WGS) project has
            the project accession NZ_WCKA00000000.  This version of the project
            (01) has the accession number NZ_WCKA01000000, and consists of
            sequences WCKA01000001-WCKA01000088.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 1.05
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 99.79x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009797225.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:36:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,227
            CDSs (total)                      :: 2,156
            Genes (coding)                    :: 2,052
            CDSs (with protein)               :: 2,052
            Genes (RNA)                       :: 71
            rRNAs                             :: 5, 7, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 6, 2 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 104
            CDSs (without protein)            :: 104
            Pseudo Genes (ambiguous residues) :: 0 of 104
            Pseudo Genes (frameshifted)       :: 36 of 104
            Pseudo Genes (incomplete)         :: 67 of 104
            Pseudo Genes (internal stop)      :: 23 of 104
            Pseudo Genes (multiple problems)  :: 19 of 104
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2221062
                     /organism="Glaesserella parasuis"
                     /mol_type="genomic DNA"
                     /strain="H87"
                     /isolation_source="Pleural effusion"
                     /host="swine"
                     /db_xref="taxon:738"
                     /geo_loc_name="China"
                     /collection_date="2010"
WGS         WCKA01000001-WCKA01000088
WGS_SCAFLD  NZ_WCKA01000001-NZ_WCKA01000088
//
LOCUS       NZ_JBJLWT010000000   4949245 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 124 J6, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLWT000000000
VERSION     NZ_JBJLWT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114914
            Assembly: GCF_045800835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4949245)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLWT000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLWT000000000.  This version of the project
            (01) has the accession number NZ_JBJLWT010000000, and consists of
            sequences JBJLWT010000001-JBJLWT010000139.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800835.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 14:07:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,876
            CDSs (total)                      :: 4,774
            Genes (coding)                    :: 4,575
            CDSs (with protein)               :: 4,575
            Genes (RNA)                       :: 102
            rRNAs                             :: 5, 4, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 3, 4, 3 (5S, 16S, 23S)
            tRNAs                             :: 80
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 199
            CDSs (without protein)            :: 199
            Pseudo Genes (ambiguous residues) :: 0 of 199
            Pseudo Genes (frameshifted)       :: 66 of 199
            Pseudo Genes (incomplete)         :: 149 of 199
            Pseudo Genes (internal stop)      :: 28 of 199
            Pseudo Genes (multiple problems)  :: 36 of 199
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4949245
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="124 J6"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2016-11-17"
WGS         JBJLWT010000001-JBJLWT010000139
WGS_SCAFLD  NZ_JBJLWT010000001-NZ_JBJLWT010000139
//
LOCUS       NZ_JBIWYX010000000   5517428 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1239, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIWYX000000000
VERSION     NZ_JBIWYX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247382
            Assembly: GCF_045618305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5517428)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIWYX000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIWYX000000000.  This version of the
            project (01) has the accession number NZ_JBIWYX010000000, and
            consists of sequences JBIWYX010000001-JBIWYX010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 360x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045618305.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:15:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,387
            CDSs (total)                      :: 5,265
            Genes (coding)                    :: 5,137
            CDSs (with protein)               :: 5,137
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 65 of 128
            Pseudo Genes (incomplete)         :: 66 of 128
            Pseudo Genes (internal stop)      :: 16 of 128
            Pseudo Genes (multiple problems)  :: 15 of 128
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5517428
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1239"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIWYX010000001-JBIWYX010000005
WGS_SCAFLD  NZ_JBIWYX010000001-NZ_JBIWYX010000005
//
LOCUS       NZ_WBIV01000000      2297460 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Glaesserella parasuis strain H19, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WBIV00000000
VERSION     NZ_WBIV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12868418
            Assembly: GCF_009796325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Glaesserella parasuis (Haemophilus parasuis)
  ORGANISM  Glaesserella parasuis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Glaesserella.
REFERENCE   1  (bases 1 to 2297460)
  AUTHORS   Li,C., Yan,H. and Wan,X.
  TITLE     WGS characterization of a Glaesserella parasuis isolate of H19
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2297460)
  AUTHORS   Li,C., Yan,H. and Wan,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2019) School of Food Science and Engineering,
            South China University of Technology, Wushan Road, Guangzhou,
            Guangdong 510640, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WBIV00000000.1.
            The Glaesserella parasuis whole genome shotgun (WGS) project has
            the project accession NZ_WBIV00000000.  This version of the project
            (01) has the accession number NZ_WBIV01000000, and consists of
            sequences WBIV01000001-WBIV01000150.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 1.05
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 99.79x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009796325.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:40:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,308
            CDSs (total)                      :: 2,251
            Genes (coding)                    :: 2,147
            CDSs (with protein)               :: 2,147
            Genes (RNA)                       :: 57
            rRNAs                             :: 3, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 104
            CDSs (without protein)            :: 104
            Pseudo Genes (ambiguous residues) :: 0 of 104
            Pseudo Genes (frameshifted)       :: 27 of 104
            Pseudo Genes (incomplete)         :: 73 of 104
            Pseudo Genes (internal stop)      :: 19 of 104
            Pseudo Genes (multiple problems)  :: 13 of 104
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2297460
                     /organism="Glaesserella parasuis"
                     /mol_type="genomic DNA"
                     /strain="H19"
                     /isolation_source="heart"
                     /host="swine"
                     /db_xref="taxon:738"
                     /geo_loc_name="China"
                     /collection_date="2007"
WGS         WBIV01000001-WBIV01000150
WGS_SCAFLD  NZ_WBIV01000001-NZ_WBIV01000150
//
LOCUS       NZ_JBJLWO010000000   4788114 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 110 A8, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLWO000000000
VERSION     NZ_JBJLWO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114909
            Assembly: GCF_045801035.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4788114)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLWO000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLWO000000000.  This version of the project
            (01) has the accession number NZ_JBJLWO010000000, and consists of
            sequences JBJLWO010000001-JBJLWO010000142.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045801035.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:50:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,802
            CDSs (total)                      :: 4,700
            Genes (coding)                    :: 4,462
            CDSs (with protein)               :: 4,462
            Genes (RNA)                       :: 102
            rRNAs                             :: 4, 2, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2, 1, 5 (5S, 16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 238
            CDSs (without protein)            :: 238
            Pseudo Genes (ambiguous residues) :: 0 of 238
            Pseudo Genes (frameshifted)       :: 72 of 238
            Pseudo Genes (incomplete)         :: 172 of 238
            Pseudo Genes (internal stop)      :: 45 of 238
            Pseudo Genes (multiple problems)  :: 44 of 238
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4788114
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="110 A8"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2016-05-05"
WGS         JBJLWO010000001-JBJLWO010000142
WGS_SCAFLD  NZ_JBJLWO010000001-NZ_JBJLWO010000142
//
LOCUS       NZ_JBIXAB010000000   5872284 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1202, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXAB000000000
VERSION     NZ_JBIXAB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247352
            Assembly: GCF_045618925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5872284)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXAB000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXAB000000000.  This version of the
            project (01) has the accession number NZ_JBIXAB010000000, and
            consists of sequences JBIXAB010000001-JBIXAB010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 319x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045618925.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:16:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,746
            CDSs (total)                      :: 5,626
            Genes (coding)                    :: 5,430
            CDSs (with protein)               :: 5,430
            Genes (RNA)                       :: 120
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 196
            CDSs (without protein)            :: 196
            Pseudo Genes (ambiguous residues) :: 0 of 196
            Pseudo Genes (frameshifted)       :: 97 of 196
            Pseudo Genes (incomplete)         :: 102 of 196
            Pseudo Genes (internal stop)      :: 25 of 196
            Pseudo Genes (multiple problems)  :: 24 of 196
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5872284
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1202"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXAB010000001-JBIXAB010000009
WGS_SCAFLD  NZ_JBIXAB010000001-NZ_JBIXAB010000009
//
LOCUS       NZ_WCKB01000000      2221873 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Glaesserella parasuis strain H90, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WCKB00000000
VERSION     NZ_WCKB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12920542
            Assembly: GCF_009796525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Glaesserella parasuis (Haemophilus parasuis)
  ORGANISM  Glaesserella parasuis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Glaesserella.
REFERENCE   1  (bases 1 to 2221873)
  AUTHORS   Li,C., Yan,H., Wan,X. and Wang,G.
  TITLE     WGS characterization of a Glaesserella parasuis isolate of H90
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2221873)
  AUTHORS   Li,C., Yan,H., Wan,X. and Wang,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-OCT-2019) School of Food Science and Engineering,
            South China University of Technology, Wushan Road, Guangzhou,
            Guangdong 510640, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WCKB00000000.1.
            The Glaesserella parasuis whole genome shotgun (WGS) project has
            the project accession NZ_WCKB00000000.  This version of the project
            (01) has the accession number NZ_WCKB01000000, and consists of
            sequences WCKB01000001-WCKB01000089.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 1.05
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 99.79x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009796525.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:33:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,232
            CDSs (total)                      :: 2,160
            Genes (coding)                    :: 2,055
            CDSs (with protein)               :: 2,055
            Genes (RNA)                       :: 72
            rRNAs                             :: 7, 7, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5, 6, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 105
            CDSs (without protein)            :: 105
            Pseudo Genes (ambiguous residues) :: 0 of 105
            Pseudo Genes (frameshifted)       :: 38 of 105
            Pseudo Genes (incomplete)         :: 66 of 105
            Pseudo Genes (internal stop)      :: 23 of 105
            Pseudo Genes (multiple problems)  :: 19 of 105
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2221873
                     /organism="Glaesserella parasuis"
                     /mol_type="genomic DNA"
                     /strain="H90"
                     /isolation_source="spleen"
                     /host="swine"
                     /db_xref="taxon:738"
                     /geo_loc_name="China"
                     /collection_date="2010"
WGS         WCKB01000001-WCKB01000089
WGS_SCAFLD  NZ_WCKB01000001-NZ_WCKB01000089
//
LOCUS       NZ_JBJLXG010000000   4731353 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 162 C9, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLXG000000000
VERSION     NZ_JBJLXG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114928
            Assembly: GCF_045800075.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4731353)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLXG000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLXG000000000.  This version of the project
            (01) has the accession number NZ_JBJLXG010000000, and consists of
            sequences JBJLXG010000001-JBJLXG010000203.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800075.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:41:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,702
            CDSs (total)                      :: 4,616
            Genes (coding)                    :: 4,381
            CDSs (with protein)               :: 4,381
            Genes (RNA)                       :: 86
            rRNAs                             :: 5, 3, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 3, 5 (5S, 16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 235
            CDSs (without protein)            :: 235
            Pseudo Genes (ambiguous residues) :: 0 of 235
            Pseudo Genes (frameshifted)       :: 70 of 235
            Pseudo Genes (incomplete)         :: 167 of 235
            Pseudo Genes (internal stop)      :: 43 of 235
            Pseudo Genes (multiple problems)  :: 42 of 235
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4731353
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="162 C9"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2018-01-29"
WGS         JBJLXG010000001-JBJLXG010000203
WGS_SCAFLD  NZ_JBJLXG010000001-NZ_JBJLXG010000203
//
LOCUS       NZ_SCEZ01000000      1297108 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Fructilactobacillus sanfranciscensis strain TMW1640, whole genome
            shotgun sequencing project.
ACCESSION   NZ_SCEZ00000000
VERSION     NZ_SCEZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10744006
            Assembly: GCF_010377275.1
KEYWORDS    WGS; RefSeq.
SOURCE      Fructilactobacillus sanfranciscensis
  ORGANISM  Fructilactobacillus sanfranciscensis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Fructilactobacillus.
REFERENCE   1  (bases 1 to 1297108)
  AUTHORS   Rogalski,E., Vogel,R.F. and Ehrmann,M.A.
  TITLE     Monitoring of Lactobacillus sanfranciscensis strains during wheat
            and rye sourdough fermentations by CRISPR locus length polymorphism
            PCR
  JOURNAL   Int J Food Microbiol 316, 108475 (2020)
   PUBMED   31874326
REFERENCE   2  (bases 1 to 1297108)
  AUTHORS   Rogalski,E. and Vogel,R.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JAN-2019) Technische Mikrobiologie, Technische
            Universitaet Muenchen, Gregor-Mendel Str. 4, Freising 85354,
            Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SCEZ00000000.1.
            The Fructilactobacillus sanfranciscensis whole genome shotgun (WGS)
            project has the project accession NZ_SCEZ00000000.  This version of
            the project (01) has the accession number NZ_SCEZ01000000, and
            consists of sequences SCEZ01000001-SCEZ01000041.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 165x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_010377275.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:43:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,389
            CDSs (total)                      :: 1,329
            Genes (coding)                    :: 1,273
            CDSs (with protein)               :: 1,273
            Genes (RNA)                       :: 60
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 56
            CDSs (without protein)            :: 56
            Pseudo Genes (ambiguous residues) :: 0 of 56
            Pseudo Genes (frameshifted)       :: 15 of 56
            Pseudo Genes (incomplete)         :: 36 of 56
            Pseudo Genes (internal stop)      :: 14 of 56
            Pseudo Genes (multiple problems)  :: 7 of 56
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1297108
                     /organism="Fructilactobacillus sanfranciscensis"
                     /mol_type="genomic DNA"
                     /strain="TMW1640"
                     /isolation_source="sourdough"
                     /db_xref="taxon:1625"
                     /geo_loc_name="Germany: Freising"
                     /collection_date="2015"
WGS         SCEZ01000001-SCEZ01000041
WGS_SCAFLD  NZ_SCEZ01000001-NZ_SCEZ01000041
//
LOCUS       NZ_JBIXBI010000000   5781615 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1161, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXBI000000000
VERSION     NZ_JBIXBI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247319
            Assembly: GCF_045619605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5781615)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXBI000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXBI000000000.  This version of the
            project (01) has the accession number NZ_JBIXBI010000000, and
            consists of sequences JBIXBI010000001-JBIXBI010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 323x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045619605.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:23:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,730
            CDSs (total)                      :: 5,605
            Genes (coding)                    :: 5,383
            CDSs (with protein)               :: 5,383
            Genes (RNA)                       :: 125
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 222
            CDSs (without protein)            :: 222
            Pseudo Genes (ambiguous residues) :: 0 of 222
            Pseudo Genes (frameshifted)       :: 124 of 222
            Pseudo Genes (incomplete)         :: 105 of 222
            Pseudo Genes (internal stop)      :: 26 of 222
            Pseudo Genes (multiple problems)  :: 30 of 222
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5781615
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1161"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXBI010000001-JBIXBI010000009
WGS_SCAFLD  NZ_JBIXBI010000001-NZ_JBIXBI010000009
//
LOCUS       NZ_JBJLXA010000000   4851611 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 152 F4, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLXA000000000
VERSION     NZ_JBJLXA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114922
            Assembly: GCF_045801075.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4851611)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLXA000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLXA000000000.  This version of the project
            (01) has the accession number NZ_JBJLXA010000000, and consists of
            sequences JBJLXA010000001-JBJLXA010000178.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045801075.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:47:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,869
            CDSs (total)                      :: 4,771
            Genes (coding)                    :: 4,518
            CDSs (with protein)               :: 4,518
            Genes (RNA)                       :: 98
            rRNAs                             :: 4, 2, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 2, 5 (5S, 16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 253
            CDSs (without protein)            :: 253
            Pseudo Genes (ambiguous residues) :: 0 of 253
            Pseudo Genes (frameshifted)       :: 74 of 253
            Pseudo Genes (incomplete)         :: 186 of 253
            Pseudo Genes (internal stop)      :: 48 of 253
            Pseudo Genes (multiple problems)  :: 46 of 253
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4851611
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="152 F4"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Reunion"
                     /lat_lon="20.8908853 S 55.4440142 E"
                     /collection_date="2017-10-10"
WGS         JBJLXA010000001-JBJLXA010000178
WGS_SCAFLD  NZ_JBJLXA010000001-NZ_JBJLXA010000178
//
LOCUS       NZ_JAHQRL010000000   5629957 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella planticola strain ROVR10, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAHQRL000000000
VERSION     NZ_JAHQRL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN19821014
            Assembly: GCF_025092595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella planticola (Raoultella planticola)
  ORGANISM  Klebsiella planticola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 5629957)
  AUTHORS   Gulasova,A., Kiskova,J., Hamarova,L., Timkova,I. and Pristas,P.
  TITLE     Draft genome of Raoultella planticola strain ROVR10
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5629957)
  AUTHORS   Gulasova,A., Kiskova,J., Hamarova,L., Timkova,I. and Pristas,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUN-2021) Institute of Biology and Ecology,
            Department of Microbiology, Pavol Jozef Safarik University in
            Kosice, Faculty of Science, Srobarova 2, Kosice 041 54, Slovakia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAHQRL000000000.1.
            The Klebsiella planticola whole genome shotgun (WGS) project has
            the project accession NZ_JAHQRL000000000.  This version of the
            project (01) has the accession number NZ_JAHQRL010000000, and
            consists of sequences JAHQRL010000001-JAHQRL010000185.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Institute of Animal
            Physiology, Centre of Biosciences Slovak Academy of Sciences,
            Kosice, Slovakia.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 376.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_025092595.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:03:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,418
            CDSs (total)                      :: 5,326
            Genes (coding)                    :: 5,200
            CDSs (with protein)               :: 5,200
            Genes (RNA)                       :: 92
            rRNAs                             :: 4, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3, 1, 2 (5S, 16S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 126
            CDSs (without protein)            :: 126
            Pseudo Genes (ambiguous residues) :: 0 of 126
            Pseudo Genes (frameshifted)       :: 45 of 126
            Pseudo Genes (incomplete)         :: 95 of 126
            Pseudo Genes (internal stop)      :: 13 of 126
            Pseudo Genes (multiple problems)  :: 24 of 126
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5629957
                     /organism="Klebsiella planticola"
                     /mol_type="genomic DNA"
                     /strain="ROVR10"
                     /isolation_source="feces"
                     /host="Passer domesticus"
                     /db_xref="taxon:575"
                     /geo_loc_name="Slovakia: Sarisske Michalany"
                     /lat_lon="49.0702 N 21.1343 E"
                     /collection_date="2014-08"
WGS         JAHQRL010000001-JAHQRL010000185
WGS_SCAFLD  NZ_JAHQRL010000001-NZ_JAHQRL010000185
//
LOCUS       NZ_JBJLWS010000000   5087982 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 121 A5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLWS000000000
VERSION     NZ_JBJLWS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114913
            Assembly: GCF_045800975.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5087982)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLWS000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLWS000000000.  This version of the project
            (01) has the accession number NZ_JBJLWS010000000, and consists of
            sequences JBJLWS010000001-JBJLWS010000164.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800975.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:48:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,105
            CDSs (total)                      :: 5,003
            Genes (coding)                    :: 4,787
            CDSs (with protein)               :: 4,787
            Genes (RNA)                       :: 102
            rRNAs                             :: 7, 4, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 4, 4, 5 (5S, 16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 216
            CDSs (without protein)            :: 216
            Pseudo Genes (ambiguous residues) :: 0 of 216
            Pseudo Genes (frameshifted)       :: 60 of 216
            Pseudo Genes (incomplete)         :: 155 of 216
            Pseudo Genes (internal stop)      :: 33 of 216
            Pseudo Genes (multiple problems)  :: 31 of 216
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5087982
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="121 A5"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2016-10-03"
WGS         JBJLWS010000001-JBJLWS010000164
WGS_SCAFLD  NZ_JBJLWS010000001-NZ_JBJLWS010000164
//
LOCUS       NZ_VKNI01000000      5772787 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella planticola strain RO-VA5294443, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VKNI00000000
VERSION     NZ_VKNI00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12220025
            Assembly: GCF_014856235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella planticola (Raoultella planticola)
  ORGANISM  Klebsiella planticola
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 5772787)
  AUTHORS   Yao,Y., Falgenhauer,L., Imirzalioglu,C. and Chakraborty,T.
  TITLE     KPC-2 carbapenem resistent Enterobacterales isolates from Germany
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5772787)
  AUTHORS   Yao,Y., Falgenhauer,L., Imirzalioglu,C. and Chakraborty,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JUL-2019) Institute of Medical Microbiology,
            Justus-Liebig-University Giessen, Schubertstrasse 81, Giessen
            35392, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VKNI00000000.1.
            The Klebsiella planticola whole genome shotgun (WGS) project has
            the project accession NZ_VKNI00000000.  This version of the project
            (01) has the accession number NZ_VKNI01000000, and consists of
            sequences VKNI01000001-VKNI01000099.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: FEB-2015
            Assembly Method        :: CLC NGS Cell v. 2015-02
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 173x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_014856235.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:02:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,536
            CDSs (total)                      :: 5,438
            Genes (coding)                    :: 5,311
            CDSs (with protein)               :: 5,311
            Genes (RNA)                       :: 98
            rRNAs                             :: 8, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 73
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 127
            CDSs (without protein)            :: 127
            Pseudo Genes (ambiguous residues) :: 0 of 127
            Pseudo Genes (frameshifted)       :: 39 of 127
            Pseudo Genes (incomplete)         :: 106 of 127
            Pseudo Genes (internal stop)      :: 15 of 127
            Pseudo Genes (multiple problems)  :: 28 of 127
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5772787
                     /organism="Klebsiella planticola"
                     /mol_type="genomic DNA"
                     /strain="RO-VA5294443"
                     /isolation_source="throat swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:575"
                     /geo_loc_name="Germany: Hesse, Giessen"
                     /lat_lon="50.58 N 8.67 E"
                     /collection_date="2015-01-06"
                     /collected_by="Institute of Medical Microbiology,
                     University Giessen"
WGS         VKNI01000001-VKNI01000099
WGS_SCAFLD  NZ_VKNI01000001-NZ_VKNI01000099
//
LOCUS       NZ_JBJLWR010000000   5086855 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain 120 E5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLWR000000000
VERSION     NZ_JBJLWR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45114912
            Assembly: GCF_045800955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 5086855)
  AUTHORS   Pot,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2024) Laboratoire DYSIIS - Dynamique des Systemes
            Infectieux en milieux Insulaires, UMR PIMIT - Processus infectieux
            en milieu insulaire tropical, 2 rue Maxime Riviere, Sainte Clotilde
            97490, Reunion
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLWR000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBJLWR000000000.  This version of the project
            (01) has the accession number NZ_JBJLWR010000000, and consists of
            sequences JBJLWR010000001-JBJLWR010000167.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 112x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800955.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:50:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,104
            CDSs (total)                      :: 5,004
            Genes (coding)                    :: 4,793
            CDSs (with protein)               :: 4,793
            Genes (RNA)                       :: 100
            rRNAs                             :: 7, 4, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 4, 4, 5 (5S, 16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 211
            CDSs (without protein)            :: 211
            Pseudo Genes (ambiguous residues) :: 0 of 211
            Pseudo Genes (frameshifted)       :: 57 of 211
            Pseudo Genes (incomplete)         :: 153 of 211
            Pseudo Genes (internal stop)      :: 33 of 211
            Pseudo Genes (multiple problems)  :: 31 of 211
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5086855
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="120 E5"
                     /isolation_source="Rectal swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Mayotte"
                     /lat_lon="12.7787988 S 45.2276151 E"
                     /collection_date="2016-09-28"
WGS         JBJLWR010000001-JBJLWR010000167
WGS_SCAFLD  NZ_JBJLWR010000001-NZ_JBJLWR010000167
//
LOCUS       NZ_JBWCAL010000000   4621029 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain K-12 isolate FW1541, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBWCAL000000000
VERSION     NZ_JBWCAL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56483788
            Assembly: GCF_056175045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4621029)
  AUTHORS   Shih,Y.-L., Wu,F., Meiyeh Lu,M., Li,J.-Y. and Chang,Z.-Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-MAR-2026) Institute of Biological Chemistry, Academia
            Sinica, 28, Sec. 2, Academia Road, Nankang, Taipei 11529, Taiwan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWCAL000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBWCAL000000000.  This version of the project
            (01) has the accession number NZ_JBWCAL010000000, and consists of
            sequence JBWCAL010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Gift from Cees Dekker's
            laboratory. Reference: doi: 10.1038/nnano.2015.126.
            
            ##Genome-Assembly-Data-START##
            Assembly Method           :: Microbial Genome Analysis of SMRT Link
                                         v. 13.0.0.207600
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: U00096.3
            Genome Coverage           :: 1.0x
            Sequencing Technology     :: PacBio Sequel
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056175045.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:50:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,501
            CDSs (total)                      :: 4,378
            Genes (coding)                    :: 4,200
            CDSs (with protein)               :: 4,200
            Genes (RNA)                       :: 123
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 15
            Pseudo Genes (total)              :: 178
            CDSs (without protein)            :: 178
            Pseudo Genes (ambiguous residues) :: 0 of 178
            Pseudo Genes (frameshifted)       :: 47 of 178
            Pseudo Genes (incomplete)         :: 131 of 178
            Pseudo Genes (internal stop)      :: 33 of 178
            Pseudo Genes (multiple problems)  :: 30 of 178
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4621029
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="K-12"
                     /isolate="FW1541"
                     /isolation_source="Lab bacteria culture"
                     /db_xref="taxon:562"
                     /geo_loc_name="Taiwan: Taipei"
                     /collection_date="2024-04-03"
                     /genotype="W3110, delta minD minE :: sfgfp-minD minE <>
                     kanR frt"
WGS         JBWCAL010000001
WGS_SCAFLD  NZ_CM149693
//
LOCUS       NZ_WJEB01000000      4505756 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Gracilibacillus saliphilus strain YIM 91119, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WJEB00000000
VERSION     NZ_WJEB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13176017
            Assembly: GCF_010994085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Gracilibacillus saliphilus
  ORGANISM  Gracilibacillus saliphilus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Gracilibacillus.
REFERENCE   1  (bases 1 to 4505756)
  AUTHORS   Tang,S.K., Wang,Y., Lou,K., Mao,P.H., Jin,X., Jiang,C.L., Xu,L.H.
            and Li,W.J.
  TITLE     Gracilibacillus saliphilus sp. nov., a moderately halophilic
            bacterium isolated from a salt lake
  JOURNAL   Int J Syst Evol Microbiol 59 (Pt 7), 1620-1624 (2009)
   PUBMED   19542126
REFERENCE   2  (bases 1 to 4505756)
  AUTHORS   Tang,S.-K.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-NOV-2019) Yunnan University, Yunnan Institute of
            Microbiology, 121st Street, Kunming City, Yunnan Province, Kunming,
            Yunnan 650091, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WJEB00000000.1.
            The Gracilibacillus saliphilus whole genome shotgun (WGS) project
            has the project accession NZ_WJEB00000000.  This version of the
            project (01) has the accession number NZ_WJEB01000000, and consists
            of sequences WJEB01000001-WJEB01000092.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 65.1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_010994085.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:06:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,433
            CDSs (total)                      :: 4,381
            Genes (coding)                    :: 4,329
            CDSs (with protein)               :: 4,329
            Genes (RNA)                       :: 52
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 14 of 52
            Pseudo Genes (incomplete)         :: 39 of 52
            Pseudo Genes (internal stop)      :: 8 of 52
            Pseudo Genes (multiple problems)  :: 9 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4505756
                     /organism="Gracilibacillus saliphilus"
                     /mol_type="genomic DNA"
                     /strain="YIM 91119"
                     /isolation_source="soil"
                     /type_material="type strain of Gracilibacillus saliphilus"
                     /db_xref="taxon:543890"
                     /geo_loc_name="China: the Xinjiang Uygur Autonomous
                     Region"
                     /collection_date="2007-05"
WGS         WJEB01000001-WJEB01000092
WGS_SCAFLD  NZ_WJEB01000001-NZ_WJEB01000092
//
LOCUS       NZ_WAHR01000000      2133550 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Glaesserella parasuis strain H19, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WAHR00000000
VERSION     NZ_WAHR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12868419
            Assembly: GCF_009796385.1
KEYWORDS    WGS; RefSeq.
SOURCE      Glaesserella parasuis (Haemophilus parasuis)
  ORGANISM  Glaesserella parasuis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Glaesserella.
REFERENCE   1  (bases 1 to 2133550)
  AUTHORS   Li,C., Yan,H. and Wan,X.
  TITLE     WGS characterization of a Glaesserella parasuis isolate of H26
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2133550)
  AUTHORS   Li,C., Yan,H. and Wan,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-SEP-2019) School of Food Science and Engineering,
            South China University of Technology, Wushan Road, Guangzhou,
            Guangdong 510640, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WAHR00000000.1.
            The Glaesserella parasuis whole genome shotgun (WGS) project has
            the project accession NZ_WAHR00000000.  This version of the project
            (01) has the accession number NZ_WAHR01000000, and consists of
            sequences WAHR01000001-WAHR01000179.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 1.05
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 99.79x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009796385.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:32:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,198
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 1,996
            CDSs (with protein)               :: 1,996
            Genes (RNA)                       :: 62
            rRNAs                             :: 3, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 3, 2, 1 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 140
            CDSs (without protein)            :: 140
            Pseudo Genes (ambiguous residues) :: 0 of 140
            Pseudo Genes (frameshifted)       :: 38 of 140
            Pseudo Genes (incomplete)         :: 107 of 140
            Pseudo Genes (internal stop)      :: 17 of 140
            Pseudo Genes (multiple problems)  :: 19 of 140
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2133550
                     /organism="Glaesserella parasuis"
                     /mol_type="genomic DNA"
                     /strain="H19"
                     /isolation_source="heart"
                     /host="swine"
                     /db_xref="taxon:738"
                     /geo_loc_name="China"
                     /collection_date="2008"
WGS         WAHR01000001-WAHR01000179
WGS_SCAFLD  NZ_WAHR01000001-NZ_WAHR01000179
//
LOCUS       NZ_JBWCAR010000000   4645806 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Escherichia coli strain MTRBAS03, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWCAR000000000
VERSION     NZ_JBWCAR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56493995
            Assembly: GCF_056175515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 4645806)
  AUTHORS   Zim,M.M.R., Hasan,M.A.E., Islam,M.S., Islam,M.M., Prome,A.A. and
            Rahman,M.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAR-2026) Department of Micobiology and Hygiene,
            Bangladesh Agricultural University, Department of Microbiology and
            Hygiene, Mymensingh 2202, Bangladesh
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWCAR000000000.1.
            The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NZ_JBWCAR000000000.  This version of the project
            (01) has the accession number NZ_JBWCAR010000000, and consists of
            sequences JBWCAR010000001-JBWCAR010000139.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.5; SPAdes v. 3.15.5
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 61.69x
            Sequencing Technology  :: Illumina NextSeq; Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056175515.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:48:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,587
            CDSs (total)                      :: 4,463
            Genes (coding)                    :: 4,327
            CDSs (with protein)               :: 4,327
            Genes (RNA)                       :: 124
            rRNAs                             :: 7, 7, 18 (5S, 16S, 23S)
            complete rRNAs                    :: 6 (5S)
            partial rRNAs                     :: 1, 7, 18 (5S, 16S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 136
            CDSs (without protein)            :: 136
            Pseudo Genes (ambiguous residues) :: 0 of 136
            Pseudo Genes (frameshifted)       :: 41 of 136
            Pseudo Genes (incomplete)         :: 89 of 136
            Pseudo Genes (internal stop)      :: 22 of 136
            Pseudo Genes (multiple problems)  :: 15 of 136
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4645806
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="MTRBAS03"
                     /isolation_source="Feed trough of dairy cattle"
                     /db_xref="taxon:562"
                     /geo_loc_name="Bangladesh: Mymensingh sadar, Mymensingh"
                     /collection_date="2025-09-17"
                     /collected_by="MD Makahuder Rahman Zim"
WGS         JBWCAR010000001-JBWCAR010000139
WGS_SCAFLD  NZ_JBWCAR010000001-NZ_JBWCAR010000139
//
LOCUS       NZ_WCKM01000000      2229778 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Glaesserella parasuis strain H134, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WCKM00000000
VERSION     NZ_WCKM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12916175
            Assembly: GCF_009796905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Glaesserella parasuis (Haemophilus parasuis)
  ORGANISM  Glaesserella parasuis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Glaesserella.
REFERENCE   1  (bases 1 to 2229778)
  AUTHORS   Li,C., Yan,H., Wan,X. and Wang,G.
  TITLE     WGS characterization of a Glaesserella parasuis isolate of H134
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2229778)
  AUTHORS   Li,C., Yan,H., Wan,X. and Wang,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-OCT-2019) School of Food Science and Engineering,
            South China University of Technology, Wushan Road, Guangzhou,
            Guangdong 510640, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WCKM00000000.1.
            The Glaesserella parasuis whole genome shotgun (WGS) project has
            the project accession NZ_WCKM00000000.  This version of the project
            (01) has the accession number NZ_WCKM01000000, and consists of
            sequences WCKM01000001-WCKM01000109.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 1.05
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 99.79x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009796905.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:38:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,251
            CDSs (total)                      :: 2,183
            Genes (coding)                    :: 2,072
            CDSs (with protein)               :: 2,072
            Genes (RNA)                       :: 68
            rRNAs                             :: 7, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 34 of 111
            Pseudo Genes (incomplete)         :: 78 of 111
            Pseudo Genes (internal stop)      :: 18 of 111
            Pseudo Genes (multiple problems)  :: 17 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2229778
                     /organism="Glaesserella parasuis"
                     /mol_type="genomic DNA"
                     /strain="H134"
                     /isolation_source="articulation"
                     /host="swine"
                     /db_xref="taxon:738"
                     /geo_loc_name="China"
                     /collection_date="2012"
WGS         WCKM01000001-WCKM01000109
WGS_SCAFLD  NZ_WCKM01000001-NZ_WCKM01000109
//
LOCUS       NZ_JBIVGK010000000   8065223 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Kitasatospora papulosa strain NPDC089910, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIVGK000000000
VERSION     NZ_JBIVGK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43997509
            Assembly: GCF_044748645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kitasatospora papulosa
  ORGANISM  Kitasatospora papulosa
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Kitasatospora.
REFERENCE   1  (bases 1 to 8065223)
  AUTHORS   Kalkreuter,E., Kautsar,S.A., Yang,D., Bader,C.D., Teijaro,C.N.,
            Fluegel,L., Davis,C.M., Simpson,J.R., Lauterbach,L., Steele,A.D.,
            Gui,C., Meng,S., Li,G., Viehrig,K., Ye,F., Su,P., Kiefer,A.F.,
            Nichols,A., Cepeda,A.J., Yan,W., Fan,B., Jiang,Y., Adhikari,A.,
            Zheng,C.-J., Schuster,L., Cowan,T.M., Smanski,M.J., Chevrette,M.G.,
            De Carvalho,L.P.S. and Shen,B.
  TITLE     The Natural Products Discovery Center: Release of the First 8490
            Sequenced Strains for Exploring Actinobacteria Biosynthetic
            Diversity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8065223)
  AUTHORS   Kalkreuter,E., Kautsar,S.A., Yang,D., Bader,C.D., Teijaro,C.N.,
            Fluegel,L., Davis,C.M., Simpson,J.R., Lauterbach,L., Steele,A.D.,
            Gui,C., Meng,S., Li,G., Viehrig,K., Ye,F., Su,P., Kiefer,A.F.,
            Nichols,A., Cepeda,A.J., Yan,W., Fan,B., Jiang,Y., Adhikari,A.,
            Zheng,C.-J., Schuster,L., Cowan,T.M., Smanski,M.J., Chevrette,M.G.,
            De Carvalho,L.P.S. and Shen,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-OCT-2024) Natural Products Discovery Center, The
            Herbert Wertheim UF Scripps Institute for Biomedical Innovation &
            Technology, 110 Scripps Way, Jupiter, FL 33458, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIVGK000000000.1.
            The Kitasatospora papulosa whole genome shotgun (WGS) project has
            the project accession NZ_JBIVGK000000000.  This version of the
            project (01) has the accession number NZ_JBIVGK010000000, and
            consists of sequences JBIVGK010000001-JBIVGK010000026.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 181.36313739609454x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_044748645.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:24:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,164
            CDSs (total)                      :: 7,087
            Genes (coding)                    :: 6,928
            CDSs (with protein)               :: 6,928
            Genes (RNA)                       :: 77
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 160
            CDSs (without protein)            :: 159
            Pseudo Genes (ambiguous residues) :: 0 of 160
            Pseudo Genes (frameshifted)       :: 62 of 160
            Pseudo Genes (incomplete)         :: 122 of 160
            Pseudo Genes (internal stop)      :: 17 of 160
            Pseudo Genes (multiple problems)  :: 38 of 160
            CRISPR Arrays                     :: 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8065223
                     /organism="Kitasatospora papulosa"
                     /mol_type="genomic DNA"
                     /strain="NPDC089910"
                     /db_xref="taxon:1464011"
WGS         JBIVGK010000001-JBIVGK010000026
WGS_SCAFLD  NZ_JBIVGK010000001-NZ_JBIVGK010000026
//
LOCUS       NZ_CDUIWT010000000   2704465 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Idiomarina loihiensis isolate MarMAG_029515, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDUIWT000000000
VERSION     NZ_CDUIWT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120722559
            Assembly: GCF_977517655.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Idiomarina loihiensis (subsurface metagenome)
  ORGANISM  Idiomarina loihiensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Idiomarinaceae; Idiomarina.
REFERENCE   1  (bases 1 to 2704465)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDUIWT000000000.1.
            The Idiomarina loihiensis whole genome shotgun (WGS) project has
            the project accession NZ_CDUIWT000000000.  This version of the
            project (01) has the accession number NZ_CDUIWT010000000, and
            consists of sequences CDUIWT010000001-CDUIWT010000149.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977517655.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 01:32:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,666
            CDSs (total)                      :: 2,635
            Genes (coding)                    :: 2,594
            CDSs (with protein)               :: 2,594
            Genes (RNA)                       :: 31
            tRNAs                             :: 27
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 41
            CDSs (without protein)            :: 41
            Pseudo Genes (ambiguous residues) :: 0 of 41
            Pseudo Genes (frameshifted)       :: 7 of 41
            Pseudo Genes (incomplete)         :: 33 of 41
            Pseudo Genes (internal stop)      :: 2 of 41
            Pseudo Genes (multiple problems)  :: 1 of 41
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2704465
                     /organism="Idiomarina loihiensis"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_029515"
                     /isolation_source="Water sample released from chimney V59
                     from Kolumbo volcano"
                     /db_xref="taxon:135577"
                     /environmental_sample
                     /geo_loc_name="Greece"
                     /collection_date="2013-09-06"
                     /metagenome_source="subsurface metagenome"
                     /metagenomic
WGS         CDUIWT010000001-CDUIWT010000149
WGS_SCAFLD  NZ_CDUIWT010000001-NZ_CDUIWT010000149
//
LOCUS       NZ_JAQCNH010000000   3531334 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Halorientalis sp. isolate LUM.68, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAQCNH000000000
VERSION     NZ_JAQCNH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32192799
            Assembly: GCF_028275115.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Halorientalis sp. (hypersaline lake metagenome)
  ORGANISM  Halorientalis sp.
            Archaea; Methanobacteriati; Methanobacteriota; Stenosarchaea group;
            Halobacteria; Halobacteriales; Haloarculaceae; Halorientalis.
REFERENCE   1  (bases 1 to 3531334)
  AUTHORS   Kheiri,R., Mehrshad,M., Pourbabaee,A.A., Ventosa,A. and
            Amoozegar,M.A.
  TITLE     Hypersaline Lake Urmia: a potential hotspot for microbial genomic
            variation
  JOURNAL   Sci Rep 13 (1), 374 (2023)
   PUBMED   36611086
  REMARK    Erratum:[Sci Rep. 2023 Feb 10;13(1):2424. doi:
            10.1038/s41598-023-29691-w. PMID: 36765130]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3531334)
  AUTHORS   Kheiri,R., Mehrshad,M., Pourbabaee,A.A., Ventosa,A. and
            Amoozegar,M.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-DEC-2022) Microbiology, Tehran University, Enqelab,
            Tehran, Tehran 3136648673, Iran
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAQCNH000000000.1.
            The Halorientalis sp. whole genome shotgun (WGS) project has the
            project accession NZ_JAQCNH000000000.  This version of the project
            (01) has the accession number NZ_JAQCNH010000000, and consists of
            sequences JAQCNH010000001-JAQCNH010000150.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 14-MAY-2021
            Assembly Method        :: MetaBAT v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_028275115.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:43:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,685
            CDSs (total)                      :: 3,636
            Genes (coding)                    :: 3,505
            CDSs (with protein)               :: 3,505
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 2 (5S, 16S)
            partial rRNAs                     :: 2, 2 (5S, 16S)
            tRNAs                             :: 44
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 131
            CDSs (without protein)            :: 131
            Pseudo Genes (ambiguous residues) :: 0 of 131
            Pseudo Genes (frameshifted)       :: 44 of 131
            Pseudo Genes (incomplete)         :: 97 of 131
            Pseudo Genes (internal stop)      :: 24 of 131
            Pseudo Genes (multiple problems)  :: 27 of 131
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3531334
                     /organism="Halorientalis sp."
                     /mol_type="genomic DNA"
                     /isolate="LUM.68"
                     /isolation_source="hyper saline lake"
                     /db_xref="taxon:1931229"
                     /environmental_sample
                     /geo_loc_name="Iran: West Azarbayejan, Lake Urmia"
                     /lat_lon="37.78243195 N 45.30924322 E"
                     /collection_date="2020-10-01"
                     /metagenome_source="hypersaline lake metagenome"
                     /metagenomic
WGS         JAQCNH010000001-JAQCNH010000150
WGS_SCAFLD  NZ_JAQCNH010000001-NZ_JAQCNH010000150
//
LOCUS       NZ_WCJX01000000      2140472 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Glaesserella parasuis strain H68, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WCJX00000000
VERSION     NZ_WCJX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12918835
            Assembly: GCF_009796535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Glaesserella parasuis (Haemophilus parasuis)
  ORGANISM  Glaesserella parasuis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Glaesserella.
REFERENCE   1  (bases 1 to 2140472)
  AUTHORS   Li,C., Yan,H., Wan,X. and Wang,G.
  TITLE     WGS characterization of a Glaesserella parasuis isolate of H68
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2140472)
  AUTHORS   Li,C., Yan,H., Wan,X. and Wang,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-OCT-2019) School of Food Science and Engineering,
            South China University of Technology, Wushan Road, Guangzhou,
            Guangdong 510640, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WCJX00000000.1.
            The Glaesserella parasuis whole genome shotgun (WGS) project has
            the project accession NZ_WCJX00000000.  This version of the project
            (01) has the accession number NZ_WCJX01000000, and consists of
            sequences WCJX01000001-WCJX01000241.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 1.05
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 99.79x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009796535.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:35:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,234
            CDSs (total)                      :: 2,169
            Genes (coding)                    :: 2,027
            CDSs (with protein)               :: 2,027
            Genes (RNA)                       :: 65
            rRNAs                             :: 1, 4, 5 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 4, 5 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 142
            CDSs (without protein)            :: 142
            Pseudo Genes (ambiguous residues) :: 0 of 142
            Pseudo Genes (frameshifted)       :: 42 of 142
            Pseudo Genes (incomplete)         :: 109 of 142
            Pseudo Genes (internal stop)      :: 14 of 142
            Pseudo Genes (multiple problems)  :: 18 of 142
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2140472
                     /organism="Glaesserella parasuis"
                     /mol_type="genomic DNA"
                     /strain="H68"
                     /isolation_source="spleen"
                     /host="swine"
                     /db_xref="taxon:738"
                     /geo_loc_name="China"
                     /collection_date="2010"
WGS         WCJX01000001-WCJX01000241
WGS_SCAFLD  NZ_WCJX01000001-NZ_WCJX01000241
//
LOCUS       NZ_JABXQY010000000   6297378 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella grimontii strain RHBSTW-00189, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JABXQY000000000
VERSION     NZ_JABXQY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN15148533
            Assembly: GCF_014103875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella grimontii
  ORGANISM  Klebsiella grimontii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 6297378)
  AUTHORS   AbuOun,M., Jones,H., Stubberfield,E., Gilson,D., Shaw,L.P.,
            Hubbard,A.T.M., Chau,K.K., Sebra,R., Peto,T.E.A., Crook,D.W.,
            Read,D.S., Gweon,H.S., Walker,A.S., Stoesser,N., Smith,R.P.,
            Anjum,M.F. and On Behalf Of The Rehab,Consortium.
  TITLE     A genomic epidemiological study shows that prevalence of
            antimicrobial resistance in Enterobacterales is associated with the
            livestock host, as well as antimicrobial usage
  JOURNAL   Microb Genom 7 (10) (2021)
   PUBMED   34609275
REFERENCE   2  (bases 1 to 6297378)
  AUTHORS   Shaw,L.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUN-2020) Nuffield Department of Medicine, University
            of Oxford, John Radcliffe Hospital, Oxford OX3 9DU, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JABXQY000000000.1.
            The Klebsiella grimontii whole genome shotgun (WGS) project has the
            project accession NZ_JABXQY000000000.  This version of the project
            (01) has the accession number NZ_JABXQY010000000, and consists of
            sequences JABXQY010000001-JABXQY010000025.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 71.3553191489362x
            Sequencing Technology  :: Illumina; PacBio SMRT
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_014103875.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:37:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,098
            CDSs (total)                      :: 5,980
            Genes (coding)                    :: 5,847
            CDSs (with protein)               :: 5,847
            Genes (RNA)                       :: 118
            rRNAs                             :: 9, 8, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 7 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 85
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 52 of 133
            Pseudo Genes (incomplete)         :: 105 of 133
            Pseudo Genes (internal stop)      :: 12 of 133
            Pseudo Genes (multiple problems)  :: 32 of 133
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6297378
                     /organism="Klebsiella grimontii"
                     /mol_type="genomic DNA"
                     /strain="RHBSTW-00189"
                     /isolation_source="Freshwater sample from downstream of
                     wastewater treatment plant"
                     /db_xref="taxon:2058152"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2017"
WGS         JABXQY010000001-JABXQY010000025
WGS_SCAFLD  NZ_JABXQY010000001-NZ_JABXQY010000025
//
LOCUS       NZ_WIUM01000000      2444759 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Glaesserella parasuis strain H178, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WIUM00000000
VERSION     NZ_WIUM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13150982
            Assembly: GCF_009797435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Glaesserella parasuis (Haemophilus parasuis)
  ORGANISM  Glaesserella parasuis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Glaesserella.
REFERENCE   1  (bases 1 to 2444759)
  AUTHORS   Li,C., Yan,H., Wan,X. and Wang,G.
  TITLE     WGS characterization of a Glaesserella parasuis isolate of H178
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2444759)
  AUTHORS   Li,C., Yan,H., Wan,X. and Wang,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-OCT-2019) School of Food Science and Engineering,
            South China University of Technology, Wushan Road, Guangzhou,
            Guangdong 510640, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WIUM00000000.1.
            The Glaesserella parasuis whole genome shotgun (WGS) project has
            the project accession NZ_WIUM00000000.  This version of the project
            (01) has the accession number NZ_WIUM01000000, and consists of
            sequences WIUM01000001-WIUM01000147.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. v1.05
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 99.79x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009797435.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:46:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,461
            CDSs (total)                      :: 2,401
            Genes (coding)                    :: 2,306
            CDSs (with protein)               :: 2,306
            Genes (RNA)                       :: 60
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 95
            CDSs (without protein)            :: 95
            Pseudo Genes (ambiguous residues) :: 0 of 95
            Pseudo Genes (frameshifted)       :: 29 of 95
            Pseudo Genes (incomplete)         :: 69 of 95
            Pseudo Genes (internal stop)      :: 15 of 95
            Pseudo Genes (multiple problems)  :: 17 of 95
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2444759
                     /organism="Glaesserella parasuis"
                     /mol_type="genomic DNA"
                     /strain="H178"
                     /isolation_source="lung"
                     /host="swine"
                     /db_xref="taxon:738"
                     /geo_loc_name="China"
                     /collection_date="2013"
WGS         WIUM01000001-WIUM01000147
WGS_SCAFLD  NZ_WIUM01000001-NZ_WIUM01000147
//
LOCUS       NZ_JBHYJL010000000   8079752 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Kitasatospora papulosa strain NPDC058999, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBHYJL000000000
VERSION     NZ_JBHYJL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43797637
            Assembly: GCF_042740635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kitasatospora papulosa
  ORGANISM  Kitasatospora papulosa
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Kitasatospora.
REFERENCE   1  (bases 1 to 8079752)
  AUTHORS   Kalkreuter,E., Kautsar,S.A., Yang,D., Bader,C.D., Teijaro,C.N.,
            Fluegel,L., Davis,C.M., Simpson,J.R., Lauterbach,L., Steele,A.D.,
            Gui,C., Meng,S., Li,G., Viehrig,K., Ye,F., Su,P., Kiefer,A.F.,
            Nichols,A., Cepeda,A.J., Yan,W., Fan,B., Jiang,Y., Adhikari,A.,
            Zheng,C.-J., Schuster,L., Cowan,T.M., Smanski,M.J., Chevrette,M.G.,
            De Carvalho,L.P.S. and Shen,B.
  TITLE     The Natural Products Discovery Center: Release of the First 8490
            Sequenced Strains for Exploring Actinobacteria Biosynthetic
            Diversity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8079752)
  AUTHORS   Kalkreuter,E., Kautsar,S.A., Yang,D., Bader,C.D., Teijaro,C.N.,
            Fluegel,L., Davis,C.M., Simpson,J.R., Lauterbach,L., Steele,A.D.,
            Gui,C., Meng,S., Li,G., Viehrig,K., Ye,F., Su,P., Kiefer,A.F.,
            Nichols,A., Cepeda,A.J., Yan,W., Fan,B., Jiang,Y., Adhikari,A.,
            Zheng,C.-J., Schuster,L., Cowan,T.M., Smanski,M.J., Chevrette,M.G.,
            De Carvalho,L.P.S. and Shen,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-SEP-2024) Natural Products Discovery Center, The
            Herbert Wertheim UF Scripps Institute for Biomedical Innovation &
            Technology, 110 Scripps Way, Jupiter, FL 33458, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBHYJL000000000.1.
            The Kitasatospora papulosa whole genome shotgun (WGS) project has
            the project accession NZ_JBHYJL000000000.  This version of the
            project (01) has the accession number NZ_JBHYJL010000000, and
            consists of sequences JBHYJL010000001-JBHYJL010000117.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 34.51893460484798x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_042740635.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:28:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,209
            CDSs (total)                      :: 7,133
            Genes (coding)                    :: 6,976
            CDSs (with protein)               :: 6,976
            Genes (RNA)                       :: 76
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 157
            CDSs (without protein)            :: 157
            Pseudo Genes (ambiguous residues) :: 0 of 157
            Pseudo Genes (frameshifted)       :: 77 of 157
            Pseudo Genes (incomplete)         :: 121 of 157
            Pseudo Genes (internal stop)      :: 19 of 157
            Pseudo Genes (multiple problems)  :: 55 of 157
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8079752
                     /organism="Kitasatospora papulosa"
                     /mol_type="genomic DNA"
                     /strain="NPDC058999"
                     /db_xref="taxon:1464011"
                     /geo_loc_name="China"
                     /collection_date="2010-01-01"
WGS         JBHYJL010000001-JBHYJL010000117
WGS_SCAFLD  NZ_JBHYJL010000001-NZ_JBHYJL010000117
//
LOCUS       NZ_JAPTHV010000000   5552863 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella ornithinolytica strain 92, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAPTHV000000000
VERSION     NZ_JAPTHV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN31988113
            Assembly: GCF_026891915.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella ornithinolytica (Raoultella ornithinolytica)
  ORGANISM  Klebsiella ornithinolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 5552863)
  AUTHORS   Wang,H.
  TITLE     Study on infection of diabetes foot caused by carbapenem resistant
            Proteus Penneri mediated by a novel plasmid containing blaNDM
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5552863)
  AUTHORS   Li,W.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2022) Clinical Laboratory, Weifang People's
            Hospital, 151 Guangwen Street, Weifang 261041, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAPTHV000000000.1.
            The Klebsiella ornithinolytica whole genome shotgun (WGS) project
            has the project accession NZ_JAPTHV000000000.  This version of the
            project (01) has the accession number NZ_JAPTHV010000000, and
            consists of sequences JAPTHV010000001-JAPTHV010000058.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 10-OCT-2022
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_026891915.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:05:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,320
            CDSs (total)                      :: 5,228
            Genes (coding)                    :: 5,150
            CDSs (with protein)               :: 5,150
            Genes (RNA)                       :: 92
            rRNAs                             :: 1, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 3 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 78
            CDSs (without protein)            :: 78
            Pseudo Genes (ambiguous residues) :: 0 of 78
            Pseudo Genes (frameshifted)       :: 23 of 78
            Pseudo Genes (incomplete)         :: 64 of 78
            Pseudo Genes (internal stop)      :: 6 of 78
            Pseudo Genes (multiple problems)  :: 14 of 78
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5552863
                     /organism="Klebsiella ornithinolytica"
                     /mol_type="genomic DNA"
                     /strain="92"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:54291"
                     /geo_loc_name="China: Weifang"
                     /collection_date="2020-11-10"
WGS         JAPTHV010000001-JAPTHV010000058
WGS_SCAFLD  NZ_JAPTHV010000001-NZ_JAPTHV010000058
//
LOCUS       NZ_JANHGS010000000   4180927 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Galbibacter orientalis strain CW9, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JANHGS000000000
VERSION     NZ_JANHGS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN29923743
            Assembly: GCF_037462395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Galbibacter orientalis
  ORGANISM  Galbibacter orientalis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Galbibacter.
REFERENCE   1  (bases 1 to 4180927)
  AUTHORS   Dong,C. and Shao,Z.
  TITLE     High-quality draft genome sequence of Joostella marina CW9
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4180927)
  AUTHORS   Dong,C. and Shao,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUL-2022) Key Laboratory of Marine Genetic Resources,
            Third Institute of Oceanography, Ministry of Natural Resources,
            P.R. China, No. 184, Daxue road, Xiamen, Fujian 361005, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JANHGS000000000.1.
            The Galbibacter orientalis whole genome shotgun (WGS) project has
            the project accession NZ_JANHGS000000000.  This version of the
            project (01) has the accession number NZ_JANHGS010000000, and
            consists of sequences JANHGS010000001-JANHGS010000059.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 18-JAN-2022
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 541.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037462395.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:27:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,584
            CDSs (total)                      :: 3,537
            Genes (coding)                    :: 3,500
            CDSs (with protein)               :: 3,500
            Genes (RNA)                       :: 47
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 5 of 37
            Pseudo Genes (incomplete)         :: 28 of 37
            Pseudo Genes (internal stop)      :: 6 of 37
            Pseudo Genes (multiple problems)  :: 2 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4180927
                     /organism="Galbibacter orientalis"
                     /mol_type="genomic DNA"
                     /strain="CW9"
                     /isolation_source="seawater collected from the Deep
                     chlorophyll maximum"
                     /db_xref="taxon:453852"
                     /geo_loc_name="Pacific Ocean: western Pacific Ocean"
                     /lat_lon="23.2608 N 162.1384 E"
                     /collection_date="2020-09-21"
WGS         JANHGS010000001-JANHGS010000059
WGS_SCAFLD  NZ_JANHGS010000001-NZ_JANHGS010000059
//
LOCUS       NZ_JBNPEM010000000   3474185 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Janibacter zhangyanbonis strain G368, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBNPEM000000000
VERSION     NZ_JBNPEM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN48325817
            Assembly: GCF_050311855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Janibacter zhangyanbonis
  ORGANISM  Janibacter zhangyanbonis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Intrasporangiaceae; Janibacter.
REFERENCE   1  (bases 1 to 3474185)
  AUTHORS   Zhang,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-MAY-2025) MOE Key Laboratory of Coal Environmental
            Pathogenicity and Prevention, Shanxi Medical University, No. 56
            Xinjian South Road, Yingze District, Taiyuan, Shanxi 030001, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNPEM000000000.1.
            The Janibacter zhangyanbonis whole genome shotgun (WGS) project has
            the project accession NZ_JBNPEM000000000.  This version of the
            project (01) has the accession number NZ_JBNPEM010000000, and
            consists of sequences JBNPEM010000001-JBNPEM010000015.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAP denovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 304x
            Sequencing Technology  :: Illumina HiSeq PE150
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_050311855.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:48:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,404
            CDSs (total)                      :: 3,341
            Genes (coding)                    :: 3,322
            CDSs (with protein)               :: 3,322
            Genes (RNA)                       :: 63
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 19
            CDSs (without protein)            :: 19
            Pseudo Genes (ambiguous residues) :: 0 of 19
            Pseudo Genes (frameshifted)       :: 6 of 19
            Pseudo Genes (incomplete)         :: 13 of 19
            Pseudo Genes (internal stop)      :: 0 of 19
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3474185
                     /organism="Janibacter zhangyanbonis"
                     /mol_type="genomic DNA"
                     /strain="G368"
                     /isolation_source="coal"
                     /db_xref="taxon:3405424"
                     /geo_loc_name="China: XinZhou City, ShanXi Province"
                     /collection_date="2024"
WGS         JBNPEM010000001-JBNPEM010000015
WGS_SCAFLD  NZ_JBNPEM010000001-NZ_JBNPEM010000015
//
LOCUS       NZ_WCJJ01000000      2101983 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Glaesserella parasuis strain H45, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WCJJ00000000
VERSION     NZ_WCJJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12916207
            Assembly: GCF_009796465.1
KEYWORDS    WGS; RefSeq.
SOURCE      Glaesserella parasuis (Haemophilus parasuis)
  ORGANISM  Glaesserella parasuis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Glaesserella.
REFERENCE   1  (bases 1 to 2101983)
  AUTHORS   Li,C., Yan,H., Wan,X. and Wang,G.
  TITLE     WGS characterization of a Glaesserella parasuis isolate of H45
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2101983)
  AUTHORS   Li,C., Yan,H., Wan,X. and Wang,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-OCT-2019) School of Food Science and Engineering,
            South China University of Technology, Wushan Road, Guangzhou,
            Guangdong 510640, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WCJJ00000000.1.
            The Glaesserella parasuis whole genome shotgun (WGS) project has
            the project accession NZ_WCJJ00000000.  This version of the project
            (01) has the accession number NZ_WCJJ01000000, and consists of
            sequences WCJJ01000001-WCJJ01000266.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 1.05
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 99.79x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009796465.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:32:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,167
            CDSs (total)                      :: 2,128
            Genes (coding)                    :: 1,983
            CDSs (with protein)               :: 1,983
            Genes (RNA)                       :: 39
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 37 of 145
            Pseudo Genes (incomplete)         :: 120 of 145
            Pseudo Genes (internal stop)      :: 12 of 145
            Pseudo Genes (multiple problems)  :: 20 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2101983
                     /organism="Glaesserella parasuis"
                     /mol_type="genomic DNA"
                     /strain="H45"
                     /isolation_source="Pericardial effusion"
                     /host="swine"
                     /db_xref="taxon:738"
                     /geo_loc_name="China"
                     /collection_date="2008"
WGS         WCJJ01000001-WCJJ01000266
WGS_SCAFLD  NZ_WCJJ01000001-NZ_WCJJ01000266
//
LOCUS       NZ_WODG01000000      2158139 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Glaesserella parasuis strain CZ2501, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WODG00000000
VERSION     NZ_WODG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13403700
            Assembly: GCF_009827955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Glaesserella parasuis (Haemophilus parasuis)
  ORGANISM  Glaesserella parasuis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Glaesserella.
REFERENCE   1  (bases 1 to 2158139)
  AUTHORS   Dai,K.
  TITLE     Whole genome sequencing of Glaesserella parasuis (Heamophilus
            parasuis) isolated from swine lungs
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2158139)
  AUTHORS   Dai,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2019) College of Veterinary Medicine, Sichuan
            Agricultural University, Huimin Road, Chengdu 611130, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WODG00000000.1.
            The Glaesserella parasuis whole genome shotgun (WGS) project has
            the project accession NZ_WODG00000000.  This version of the project
            (01) has the accession number NZ_WODG01000000, and consists of
            sequences WODG01000001-WODG01000128.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 123x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009827955.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:35:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,236
            CDSs (total)                      :: 2,166
            Genes (coding)                    :: 2,019
            CDSs (with protein)               :: 2,019
            Genes (RNA)                       :: 70
            rRNAs                             :: 6, 6, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1 (5S, 23S)
            partial rRNAs                     :: 1, 6, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 147
            CDSs (without protein)            :: 147
            Pseudo Genes (ambiguous residues) :: 0 of 147
            Pseudo Genes (frameshifted)       :: 50 of 147
            Pseudo Genes (incomplete)         :: 108 of 147
            Pseudo Genes (internal stop)      :: 18 of 147
            Pseudo Genes (multiple problems)  :: 24 of 147
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2158139
                     /organism="Glaesserella parasuis"
                     /mol_type="genomic DNA"
                     /strain="CZ2501"
                     /isolation_source="lung"
                     /host="swine"
                     /db_xref="taxon:738"
                     /geo_loc_name="China: Chongzhou"
                     /collection_date="2016-02-25"
WGS         WODG01000001-WODG01000128
WGS_SCAFLD  NZ_WODG01000001-NZ_WODG01000128
//
LOCUS       NZ_JBHWAX010000000   7537042 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Kitasatospora papulosa strain NPDC059543, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBHWAX000000000
VERSION     NZ_JBHWAX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43798034
            Assembly: GCF_042735955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kitasatospora papulosa
  ORGANISM  Kitasatospora papulosa
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Kitasatospora.
REFERENCE   1  (bases 1 to 7537042)
  AUTHORS   Kalkreuter,E., Kautsar,S.A., Yang,D., Bader,C.D., Teijaro,C.N.,
            Fluegel,L., Davis,C.M., Simpson,J.R., Lauterbach,L., Steele,A.D.,
            Gui,C., Meng,S., Li,G., Viehrig,K., Ye,F., Su,P., Kiefer,A.F.,
            Nichols,A., Cepeda,A.J., Yan,W., Fan,B., Jiang,Y., Adhikari,A.,
            Zheng,C.-J., Schuster,L., Cowan,T.M., Smanski,M.J., Chevrette,M.G.,
            De Carvalho,L.P.S. and Shen,B.
  TITLE     The Natural Products Discovery Center: Release of the First 8490
            Sequenced Strains for Exploring Actinobacteria Biosynthetic
            Diversity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7537042)
  AUTHORS   Kalkreuter,E., Kautsar,S.A., Yang,D., Bader,C.D., Teijaro,C.N.,
            Fluegel,L., Davis,C.M., Simpson,J.R., Lauterbach,L., Steele,A.D.,
            Gui,C., Meng,S., Li,G., Viehrig,K., Ye,F., Su,P., Kiefer,A.F.,
            Nichols,A., Cepeda,A.J., Yan,W., Fan,B., Jiang,Y., Adhikari,A.,
            Zheng,C.-J., Schuster,L., Cowan,T.M., Smanski,M.J., Chevrette,M.G.,
            De Carvalho,L.P.S. and Shen,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-SEP-2024) Natural Products Discovery Center, The
            Herbert Wertheim UF Scripps Institute for Biomedical Innovation &
            Technology, 110 Scripps Way, Jupiter, FL 33458, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBHWAX000000000.1.
            The Kitasatospora papulosa whole genome shotgun (WGS) project has
            the project accession NZ_JBHWAX000000000.  This version of the
            project (01) has the accession number NZ_JBHWAX010000000, and
            consists of sequences JBHWAX010000001-JBHWAX010000091.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 36.792685376351336x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_042735955.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:27:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,662
            CDSs (total)                      :: 6,587
            Genes (coding)                    :: 6,476
            CDSs (with protein)               :: 6,476
            Genes (RNA)                       :: 75
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 1 (5S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 112
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 112
            Pseudo Genes (frameshifted)       :: 49 of 112
            Pseudo Genes (incomplete)         :: 86 of 112
            Pseudo Genes (internal stop)      :: 8 of 112
            Pseudo Genes (multiple problems)  :: 31 of 112
            CRISPR Arrays                     :: 6
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7537042
                     /organism="Kitasatospora papulosa"
                     /mol_type="genomic DNA"
                     /strain="NPDC059543"
                     /db_xref="taxon:1464011"
                     /geo_loc_name="South Korea"
                     /collection_date="2010-01-01"
WGS         JBHWAX010000001-JBHWAX010000091
WGS_SCAFLD  NZ_JBHWAX010000001-NZ_JBHWAX010000091
//
LOCUS       NZ_JBHTWK010000000   7833708 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Kitasatospora papulosa strain NPDC056633, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBHTWK000000000
VERSION     NZ_JBHTWK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43795815
            Assembly: GCF_042792395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kitasatospora papulosa
  ORGANISM  Kitasatospora papulosa
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Kitasatospora.
REFERENCE   1  (bases 1 to 7833708)
  AUTHORS   Kalkreuter,E., Kautsar,S.A., Yang,D., Bader,C.D., Teijaro,C.N.,
            Fluegel,L., Davis,C.M., Simpson,J.R., Lauterbach,L., Steele,A.D.,
            Gui,C., Meng,S., Li,G., Viehrig,K., Ye,F., Su,P., Kiefer,A.F.,
            Nichols,A., Cepeda,A.J., Yan,W., Fan,B., Jiang,Y., Adhikari,A.,
            Zheng,C.-J., Schuster,L., Cowan,T.M., Smanski,M.J., Chevrette,M.G.,
            De Carvalho,L.P.S. and Shen,B.
  TITLE     The Natural Products Discovery Center: Release of the First 8490
            Sequenced Strains for Exploring Actinobacteria Biosynthetic
            Diversity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7833708)
  AUTHORS   Kalkreuter,E., Kautsar,S.A., Yang,D., Bader,C.D., Teijaro,C.N.,
            Fluegel,L., Davis,C.M., Simpson,J.R., Lauterbach,L., Steele,A.D.,
            Gui,C., Meng,S., Li,G., Viehrig,K., Ye,F., Su,P., Kiefer,A.F.,
            Nichols,A., Cepeda,A.J., Yan,W., Fan,B., Jiang,Y., Adhikari,A.,
            Zheng,C.-J., Schuster,L., Cowan,T.M., Smanski,M.J., Chevrette,M.G.,
            De Carvalho,L.P.S. and Shen,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-SEP-2024) Natural Products Discovery Center, The
            Herbert Wertheim UF Scripps Institute for Biomedical Innovation &
            Technology, 110 Scripps Way, Jupiter, FL 33458, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBHTWK000000000.1.
            The Kitasatospora papulosa whole genome shotgun (WGS) project has
            the project accession NZ_JBHTWK000000000.  This version of the
            project (01) has the accession number NZ_JBHTWK010000000, and
            consists of sequences JBHTWK010000001-JBHTWK010000087.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 59.26315364908014x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_042792395.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:27:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,967
            CDSs (total)                      :: 6,882
            Genes (coding)                    :: 6,740
            CDSs (with protein)               :: 6,740
            Genes (RNA)                       :: 85
            rRNAs                             :: 3, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 143
            CDSs (without protein)            :: 142
            Pseudo Genes (ambiguous residues) :: 0 of 143
            Pseudo Genes (frameshifted)       :: 63 of 143
            Pseudo Genes (incomplete)         :: 109 of 143
            Pseudo Genes (internal stop)      :: 10 of 143
            Pseudo Genes (multiple problems)  :: 38 of 143
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7833708
                     /organism="Kitasatospora papulosa"
                     /mol_type="genomic DNA"
                     /strain="NPDC056633"
                     /db_xref="taxon:1464011"
                     /geo_loc_name="China"
                     /collection_date="2010-01-01"
WGS         JBHTWK010000001-JBHTWK010000087
WGS_SCAFLD  NZ_JBHTWK010000001-NZ_JBHTWK010000087
//
LOCUS       NZ_CDVFOW010000000   2538190 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Glycocaulis albus isolate MarMAG_029453, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CDVFOW000000000
VERSION     NZ_CDVFOW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737353
            Assembly: GCF_977671055.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Glycocaulis albus (marine metagenome)
  ORGANISM  Glycocaulis albus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Maricaulales; Maricaulaceae; Glycocaulis.
REFERENCE   1  (bases 1 to 2538190)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVFOW000000000.1.
            The Glycocaulis albus whole genome shotgun (WGS) project has the
            project accession NZ_CDVFOW000000000.  This version of the project
            (01) has the accession number NZ_CDVFOW010000000, and consists of
            sequences CDVFOW010000001-CDVFOW010000115.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977671055.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 18:03:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,562
            CDSs (total)                      :: 2,523
            Genes (coding)                    :: 2,494
            CDSs (with protein)               :: 2,494
            Genes (RNA)                       :: 39
            tRNAs                             :: 35
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 2 of 29
            Pseudo Genes (incomplete)         :: 26 of 29
            Pseudo Genes (internal stop)      :: 1 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2538190
                     /organism="Glycocaulis albus"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_029453"
                     /isolation_source="Mariana Trench, particle-associated
                     microorganism abyssal water (4,000 m)"
                     /db_xref="taxon:1382801"
                     /environmental_sample
                     /geo_loc_name="Pacific Ocean"
                     /collection_date="2016-09-15"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVFOW010000001-CDVFOW010000115
WGS_SCAFLD  NZ_CDVFOW010000001-NZ_CDVFOW010000115
//
LOCUS       NZ_JBHYIF010000000   8103481 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Kitasatospora papulosa strain NPDC059039, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBHYIF000000000
VERSION     NZ_JBHYIF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43797673
            Assembly: GCF_042739595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kitasatospora papulosa
  ORGANISM  Kitasatospora papulosa
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Kitasatospora.
REFERENCE   1  (bases 1 to 8103481)
  AUTHORS   Kalkreuter,E., Kautsar,S.A., Yang,D., Bader,C.D., Teijaro,C.N.,
            Fluegel,L., Davis,C.M., Simpson,J.R., Lauterbach,L., Steele,A.D.,
            Gui,C., Meng,S., Li,G., Viehrig,K., Ye,F., Su,P., Kiefer,A.F.,
            Nichols,A., Cepeda,A.J., Yan,W., Fan,B., Jiang,Y., Adhikari,A.,
            Zheng,C.-J., Schuster,L., Cowan,T.M., Smanski,M.J., Chevrette,M.G.,
            De Carvalho,L.P.S. and Shen,B.
  TITLE     The Natural Products Discovery Center: Release of the First 8490
            Sequenced Strains for Exploring Actinobacteria Biosynthetic
            Diversity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8103481)
  AUTHORS   Kalkreuter,E., Kautsar,S.A., Yang,D., Bader,C.D., Teijaro,C.N.,
            Fluegel,L., Davis,C.M., Simpson,J.R., Lauterbach,L., Steele,A.D.,
            Gui,C., Meng,S., Li,G., Viehrig,K., Ye,F., Su,P., Kiefer,A.F.,
            Nichols,A., Cepeda,A.J., Yan,W., Fan,B., Jiang,Y., Adhikari,A.,
            Zheng,C.-J., Schuster,L., Cowan,T.M., Smanski,M.J., Chevrette,M.G.,
            De Carvalho,L.P.S. and Shen,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-SEP-2024) Natural Products Discovery Center, The
            Herbert Wertheim UF Scripps Institute for Biomedical Innovation &
            Technology, 110 Scripps Way, Jupiter, FL 33458, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBHYIF000000000.1.
            The Kitasatospora papulosa whole genome shotgun (WGS) project has
            the project accession NZ_JBHYIF000000000.  This version of the
            project (01) has the accession number NZ_JBHYIF010000000, and
            consists of sequences JBHYIF010000001-JBHYIF010000079.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 47.48786366713322x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_042739595.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:30:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,184
            CDSs (total)                      :: 7,100
            Genes (coding)                    :: 6,945
            CDSs (with protein)               :: 6,945
            Genes (RNA)                       :: 84
            rRNAs                             :: 3, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 156
            CDSs (without protein)            :: 155
            Pseudo Genes (ambiguous residues) :: 0 of 156
            Pseudo Genes (frameshifted)       :: 63 of 156
            Pseudo Genes (incomplete)         :: 122 of 156
            Pseudo Genes (internal stop)      :: 10 of 156
            Pseudo Genes (multiple problems)  :: 38 of 156
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8103481
                     /organism="Kitasatospora papulosa"
                     /mol_type="genomic DNA"
                     /strain="NPDC059039"
                     /db_xref="taxon:1464011"
                     /geo_loc_name="China"
                     /collection_date="2010-01-01"
WGS         JBHYIF010000001-JBHYIF010000079
WGS_SCAFLD  NZ_JBHYIF010000001-NZ_JBHYIF010000079
//
LOCUS       NZ_JASORV010000000   5326829 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella aerogenes strain UMB7515, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JASORV000000000
VERSION     NZ_JASORV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN34998845
            Assembly: GCF_030222385.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella aerogenes
  ORGANISM  Klebsiella aerogenes
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 5326829)
  AUTHORS   Du,J.
  TITLE     Genomic Catalog of Human Bladder Bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5326829)
  AUTHORS   Du,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAY-2023) LUMC, Loyola University Chicago, S 1st
            avenue, Chicago, IL 60153, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JASORV000000000.1.
            The Klebsiella aerogenes whole genome shotgun (WGS) project has the
            project accession NZ_JASORV000000000.  This version of the project
            (01) has the accession number NZ_JASORV010000000, and consists of
            sequences JASORV010000001-JASORV010000107.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 130.722x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_030222385.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:52:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,178
            CDSs (total)                      :: 5,093
            Genes (coding)                    :: 4,984
            CDSs (with protein)               :: 4,984
            Genes (RNA)                       :: 85
            rRNAs                             :: 2, 4, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 4, 3 (5S, 16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 46 of 109
            Pseudo Genes (incomplete)         :: 80 of 109
            Pseudo Genes (internal stop)      :: 10 of 109
            Pseudo Genes (multiple problems)  :: 21 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5326829
                     /organism="Klebsiella aerogenes"
                     /mol_type="genomic DNA"
                     /strain="UMB7515"
                     /isolation_source="Urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:548"
                     /geo_loc_name="USA: Maywood, IL"
                     /lat_lon="41.85911095 N 87.83527146 W"
WGS         JASORV010000001-JASORV010000107
WGS_SCAFLD  NZ_JASORV010000001-NZ_JASORV010000107
//
LOCUS       NZ_VEXY01000000      1585332 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Helicobacter pylori strain KH0175, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VEXY00000000
VERSION     NZ_VEXY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12011844
            Assembly: GCF_006438455.1
KEYWORDS    WGS; RefSeq.
SOURCE      Helicobacter pylori
  ORGANISM  Helicobacter pylori
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (bases 1 to 1585332)
  AUTHORS   Tuan,V.P., Narith,D., Tshibangu-Kabamba,E., Dung,H.D.Q., Viet,P.T.,
            Sokomoth,S., Binh,T.T., Sokhem,S., Tri,T.D., Ngov,S., Tung,P.H.,
            Thuan,N.P.M., Truc,T.C., Phuc,B.H., Matsumoto,T., Fauzia,K.A.,
            Akada,J., Trang,T.T.H. and Yamaoka,Y.
  TITLE     A Next-Generation Sequencing-Based Approach to Identify Genetic
            Determinants of Antibiotic Resistance in Cambodian Helicobacter
            pylori Clinical Isolates
  JOURNAL   J Clin Med 8 (6), 858 (2019)
   PUBMED   31208076
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1585332)
  AUTHORS   Tuan,V.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-JUN-2019) Environmental and Preventive of Medicine,
            Oita University, 1-1 Idaigaoka, Hasama-Machi, Yufu, Oita 879-5593,
            Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VEXY00000000.1.
            The Helicobacter pylori whole genome shotgun (WGS) project has the
            project accession NZ_VEXY00000000.  This version of the project
            (01) has the accession number NZ_VEXY01000000, and consists of
            sequences VEXY01000001-VEXY01000037.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 17x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_006438455.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:13:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,563
            CDSs (total)                      :: 1,519
            Genes (coding)                    :: 1,407
            CDSs (with protein)               :: 1,407
            Genes (RNA)                       :: 44
            rRNAs                             :: 1, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 36
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 112
            CDSs (without protein)            :: 112
            Pseudo Genes (ambiguous residues) :: 0 of 112
            Pseudo Genes (frameshifted)       :: 68 of 112
            Pseudo Genes (incomplete)         :: 47 of 112
            Pseudo Genes (internal stop)      :: 14 of 112
            Pseudo Genes (multiple problems)  :: 15 of 112
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1585332
                     /organism="Helicobacter pylori"
                     /mol_type="genomic DNA"
                     /strain="KH0175"
                     /isolation_source="stomach"
                     /host="Homo sapiens"
                     /db_xref="taxon:210"
                     /geo_loc_name="Cambodia: Phnom Penh"
                     /collection_date="2015"
                     /collected_by="Yoshio Yamaoka"
WGS         VEXY01000001-VEXY01000037
WGS_SCAFLD  NZ_VEXY01000001-NZ_VEXY01000037
//
LOCUS       NZ_VNQX01000000      6025297 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella michiganensis strain 502565-17, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VNQX00000000
VERSION     NZ_VNQX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12212209
            Assembly: GCF_020118815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella michiganensis
  ORGANISM  Klebsiella michiganensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella.
REFERENCE   1  (bases 1 to 6025297)
  AUTHORS   Cuenod,A., Wuthrich,D., Seth-Smith,H.M.B., Ott,C., Gehringer,C.,
            Foucault,F., Mouchet,R., Kassim,A., Revathi,G., Vogt,D.R., von
            Felten,S., Bassetti,S., Tschudin-Sutter,S., Hettich,T.,
            Schlotterbeck,G., Homberger,C., Casanova,C., Moran-Gilad,J.,
            Sagi,O., Rodriguez-Sanchez,B., Muller,F., Aerni,M., Gaia,V., van
            Dessel,H., Kampinga,G.A., Muller,C., Daubenberger,C., Pfluger,V.
            and Egli,A.
  TITLE     Whole-genome sequence-informed MALDI-TOF MS diagnostics reveal
            importance of Klebsiella oxytoca group in invasive infections: a
            retrospective clinical study
  JOURNAL   Genome Med 13 (1), 150 (2021)
   PUBMED   34517886
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6025297)
  AUTHORS   Cuenod,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2019) Department of Biomedicine, University of
            Basel, Hebelstrasse 20, Basel, BS 4051, Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VNQX00000000.1.
            The Klebsiella michiganensis whole genome shotgun (WGS) project has
            the project accession NZ_VNQX00000000.  This version of the project
            (01) has the accession number NZ_VNQX01000000, and consists of
            sequences VNQX01000001-VNQX01000097.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 60x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_020118815.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:43:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,741
            CDSs (total)                      :: 5,651
            Genes (coding)                    :: 5,542
            CDSs (with protein)               :: 5,542
            Genes (RNA)                       :: 90
            rRNAs                             :: 2, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 3 (16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 109
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 109
            Pseudo Genes (frameshifted)       :: 41 of 109
            Pseudo Genes (incomplete)         :: 76 of 109
            Pseudo Genes (internal stop)      :: 15 of 109
            Pseudo Genes (multiple problems)  :: 21 of 109
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6025297
                     /organism="Klebsiella michiganensis"
                     /mol_type="genomic DNA"
                     /strain="502565-17"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:1134687"
                     /geo_loc_name="Switzerland"
                     /lat_lon="47.562446 N 7.583217 E"
                     /collection_date="2017"
WGS         VNQX01000001-VNQX01000097
WGS_SCAFLD  NZ_VNQX01000001-NZ_VNQX01000097
//
LOCUS       NZ_JBHYHI010000000   7890772 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Kitasatospora papulosa strain NPDC059068, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBHYHI000000000
VERSION     NZ_JBHYHI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43797697
            Assembly: GCF_042739035.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kitasatospora papulosa
  ORGANISM  Kitasatospora papulosa
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Kitasatospora.
REFERENCE   1  (bases 1 to 7890772)
  AUTHORS   Kalkreuter,E., Kautsar,S.A., Yang,D., Bader,C.D., Teijaro,C.N.,
            Fluegel,L., Davis,C.M., Simpson,J.R., Lauterbach,L., Steele,A.D.,
            Gui,C., Meng,S., Li,G., Viehrig,K., Ye,F., Su,P., Kiefer,A.F.,
            Nichols,A., Cepeda,A.J., Yan,W., Fan,B., Jiang,Y., Adhikari,A.,
            Zheng,C.-J., Schuster,L., Cowan,T.M., Smanski,M.J., Chevrette,M.G.,
            De Carvalho,L.P.S. and Shen,B.
  TITLE     The Natural Products Discovery Center: Release of the First 8490
            Sequenced Strains for Exploring Actinobacteria Biosynthetic
            Diversity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7890772)
  AUTHORS   Kalkreuter,E., Kautsar,S.A., Yang,D., Bader,C.D., Teijaro,C.N.,
            Fluegel,L., Davis,C.M., Simpson,J.R., Lauterbach,L., Steele,A.D.,
            Gui,C., Meng,S., Li,G., Viehrig,K., Ye,F., Su,P., Kiefer,A.F.,
            Nichols,A., Cepeda,A.J., Yan,W., Fan,B., Jiang,Y., Adhikari,A.,
            Zheng,C.-J., Schuster,L., Cowan,T.M., Smanski,M.J., Chevrette,M.G.,
            De Carvalho,L.P.S. and Shen,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-SEP-2024) Natural Products Discovery Center, The
            Herbert Wertheim UF Scripps Institute for Biomedical Innovation &
            Technology, 110 Scripps Way, Jupiter, FL 33458, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBHYHI000000000.1.
            The Kitasatospora papulosa whole genome shotgun (WGS) project has
            the project accession NZ_JBHYHI000000000.  This version of the
            project (01) has the accession number NZ_JBHYHI010000000, and
            consists of sequences JBHYHI010000001-JBHYHI010000195.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 14.843897415205744x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_042739035.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:37:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,060
            CDSs (total)                      :: 6,983
            Genes (coding)                    :: 6,848
            CDSs (with protein)               :: 6,848
            Genes (RNA)                       :: 77
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (5S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 136
            CDSs (without protein)            :: 135
            Pseudo Genes (ambiguous residues) :: 0 of 136
            Pseudo Genes (frameshifted)       :: 43 of 136
            Pseudo Genes (incomplete)         :: 112 of 136
            Pseudo Genes (internal stop)      :: 7 of 136
            Pseudo Genes (multiple problems)  :: 25 of 136
            CRISPR Arrays                     :: 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7890772
                     /organism="Kitasatospora papulosa"
                     /mol_type="genomic DNA"
                     /strain="NPDC059068"
                     /db_xref="taxon:1464011"
                     /geo_loc_name="China"
                     /collection_date="2010-01-01"
WGS         JBHYHI010000001-JBHYHI010000195
WGS_SCAFLD  NZ_JBHYHI010000001-NZ_JBHYHI010000195
//
LOCUS       NZ_JAQFWV010000000   3680190 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Halohasta sp. A2, whole genome shotgun sequencing project.
ACCESSION   NZ_JAQFWV000000000
VERSION     NZ_JAQFWV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN32187420
            Assembly: GCF_056175805.1
KEYWORDS    WGS; RefSeq.
SOURCE      Halohasta sp. A2
  ORGANISM  Halohasta sp. A2
            Archaea; Methanobacteriati; Methanobacteriota; Stenosarchaea group;
            Halobacteria; Halobacteriales; Haloferacaceae; Halohasta.
REFERENCE   1  (bases 1 to 3680190)
  AUTHORS   Srivastava,A.
  TITLE     Microbial Habitability of Sulfate-rich Environments of Earth and
            Mars
  JOURNAL   Thesis (2023) The Open University, Milton Keynes, Buckinghamshire,
            United Kingdom
REFERENCE   2  (bases 1 to 3680190)
  AUTHORS   Srivastava,A., Macey,M. and Olsson-Francis,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JAN-2023) EEES, The Open University, The Open
            University, Milton Keynes, Buckinghamshire MK7 6AA, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAQFWV000000000.1.
            The Halohasta sp. A2 whole genome shotgun (WGS) project has the
            project accession NZ_JAQFWV000000000.  This version of the project
            (01) has the accession number NZ_JAQFWV010000000, and consists of
            sequences JAQFWV010000001-JAQFWV010000379.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056175805.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:41:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,899
            CDSs (total)                      :: 3,844
            Genes (coding)                    :: 3,543
            CDSs (with protein)               :: 3,543
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 48
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 301
            CDSs (without protein)            :: 301
            Pseudo Genes (ambiguous residues) :: 0 of 301
            Pseudo Genes (frameshifted)       :: 44 of 301
            Pseudo Genes (incomplete)         :: 265 of 301
            Pseudo Genes (internal stop)      :: 25 of 301
            Pseudo Genes (multiple problems)  :: 27 of 301
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3680190
                     /organism="Halohasta sp. A2"
                     /mol_type="genomic DNA"
                     /strain="A2"
                     /isolation_source="Evaporite"
                     /db_xref="taxon:3009079"
                     /geo_loc_name="Canada"
                     /collection_date="2019"
WGS         JAQFWV010000001-JAQFWV010000379
WGS_SCAFLD  NZ_JAQFWV010000001-NZ_JAQFWV010000379
//
LOCUS       NZ_JBNPEL010000000   3111174 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Janibacter zhaoxuefangae strain G1551, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBNPEL000000000
VERSION     NZ_JBNPEL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN48325816
            Assembly: GCF_050312095.1
KEYWORDS    WGS; RefSeq.
SOURCE      Janibacter zhaoxuefangae
  ORGANISM  Janibacter zhaoxuefangae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Intrasporangiaceae; Janibacter.
REFERENCE   1  (bases 1 to 3111174)
  AUTHORS   Zhang,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-MAY-2025) MOE Key Laboratory of Coal Environmental
            Pathogenicity and Prevention, Shanxi Medical University, No. 56
            Xinjian South Road, Yingze District, Taiyuan, Shanxi 030001, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBNPEL000000000.1.
            The Janibacter zhaoxuefangae whole genome shotgun (WGS) project has
            the project accession NZ_JBNPEL000000000.  This version of the
            project (01) has the accession number NZ_JBNPEL010000000, and
            consists of sequences JBNPEL010000001-JBNPEL010000036.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAP denovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 340x
            Sequencing Technology  :: Illumina HiSeq PE150
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_050312095.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:40:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,935
            CDSs (total)                      :: 2,875
            Genes (coding)                    :: 2,855
            CDSs (with protein)               :: 2,855
            Genes (RNA)                       :: 60
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 4 of 20
            Pseudo Genes (incomplete)         :: 16 of 20
            Pseudo Genes (internal stop)      :: 1 of 20
            Pseudo Genes (multiple problems)  :: 1 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3111174
                     /organism="Janibacter zhaoxuefangae"
                     /mol_type="genomic DNA"
                     /strain="G1551"
                     /isolation_source="coal"
                     /db_xref="taxon:3418717"
                     /geo_loc_name="China: XinZhou City, ShanXi Province"
                     /collection_date="2024"
WGS         JBNPEL010000001-JBNPEL010000036
WGS_SCAFLD  NZ_JBNPEL010000001-NZ_JBNPEL010000036
//
LOCUS       NZ_JBHUSI010000000   7802924 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Kitasatospora papulosa strain NPDC057018, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBHUSI000000000
VERSION     NZ_JBHUSI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43796054
            Assembly: GCF_042673365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kitasatospora papulosa
  ORGANISM  Kitasatospora papulosa
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Kitasatospora.
REFERENCE   1  (bases 1 to 7802924)
  AUTHORS   Kalkreuter,E., Kautsar,S.A., Yang,D., Bader,C.D., Teijaro,C.N.,
            Fluegel,L., Davis,C.M., Simpson,J.R., Lauterbach,L., Steele,A.D.,
            Gui,C., Meng,S., Li,G., Viehrig,K., Ye,F., Su,P., Kiefer,A.F.,
            Nichols,A., Cepeda,A.J., Yan,W., Fan,B., Jiang,Y., Adhikari,A.,
            Zheng,C.-J., Schuster,L., Cowan,T.M., Smanski,M.J., Chevrette,M.G.,
            De Carvalho,L.P.S. and Shen,B.
  TITLE     The Natural Products Discovery Center: Release of the First 8490
            Sequenced Strains for Exploring Actinobacteria Biosynthetic
            Diversity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7802924)
  AUTHORS   Kalkreuter,E., Kautsar,S.A., Yang,D., Bader,C.D., Teijaro,C.N.,
            Fluegel,L., Davis,C.M., Simpson,J.R., Lauterbach,L., Steele,A.D.,
            Gui,C., Meng,S., Li,G., Viehrig,K., Ye,F., Su,P., Kiefer,A.F.,
            Nichols,A., Cepeda,A.J., Yan,W., Fan,B., Jiang,Y., Adhikari,A.,
            Zheng,C.-J., Schuster,L., Cowan,T.M., Smanski,M.J., Chevrette,M.G.,
            De Carvalho,L.P.S. and Shen,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-SEP-2024) Natural Products Discovery Center, The
            Herbert Wertheim UF Scripps Institute for Biomedical Innovation &
            Technology, 110 Scripps Way, Jupiter, FL 33458, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBHUSI000000000.1.
            The Kitasatospora papulosa whole genome shotgun (WGS) project has
            the project accession NZ_JBHUSI000000000.  This version of the
            project (01) has the accession number NZ_JBHUSI010000000, and
            consists of sequences JBHUSI010000001-JBHUSI010000100.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 42.283209505773875x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_042673365.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:34:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,924
            CDSs (total)                      :: 6,844
            Genes (coding)                    :: 6,697
            CDSs (with protein)               :: 6,697
            Genes (RNA)                       :: 80
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 148
            CDSs (without protein)            :: 147
            Pseudo Genes (ambiguous residues) :: 0 of 148
            Pseudo Genes (frameshifted)       :: 63 of 148
            Pseudo Genes (incomplete)         :: 114 of 148
            Pseudo Genes (internal stop)      :: 10 of 148
            Pseudo Genes (multiple problems)  :: 38 of 148
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7802924
                     /organism="Kitasatospora papulosa"
                     /mol_type="genomic DNA"
                     /strain="NPDC057018"
                     /db_xref="taxon:1464011"
                     /geo_loc_name="China"
                     /collection_date="2010-01-01"
WGS         JBHUSI010000001-JBHUSI010000100
WGS_SCAFLD  NZ_JBHUSI010000001-NZ_JBHUSI010000100
//
LOCUS       NZ_CDVBKQ010000000   2722079 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Idiomarina loihiensis isolate MarMAG_029513, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVBKQ000000000
VERSION     NZ_CDVBKQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120735705
            Assembly: GCF_977642955.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Idiomarina loihiensis (subsurface metagenome)
  ORGANISM  Idiomarina loihiensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Idiomarinaceae; Idiomarina.
REFERENCE   1  (bases 1 to 2722079)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVBKQ000000000.1.
            The Idiomarina loihiensis whole genome shotgun (WGS) project has
            the project accession NZ_CDVBKQ000000000.  This version of the
            project (01) has the accession number NZ_CDVBKQ010000000, and
            consists of sequences CDVBKQ010000001-CDVBKQ010000065.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977642955.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 01:30:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,628
            CDSs (total)                      :: 2,583
            Genes (coding)                    :: 2,557
            CDSs (with protein)               :: 2,557
            Genes (RNA)                       :: 45
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 7 of 26
            Pseudo Genes (incomplete)         :: 17 of 26
            Pseudo Genes (internal stop)      :: 4 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2722079
                     /organism="Idiomarina loihiensis"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_029513"
                     /db_xref="taxon:135577"
                     /environmental_sample
                     /geo_loc_name="Atlantic Ocean"
                     /collection_date="2014-04-10"
                     /metagenome_source="subsurface metagenome"
                     /metagenomic
WGS         CDVBKQ010000001-CDVBKQ010000065
WGS_SCAFLD  NZ_CDVBKQ010000001-NZ_CDVBKQ010000065
//
LOCUS       NZ_JBHYJK010000000   7814363 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Kitasatospora papulosa strain NPDC059000, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBHYJK000000000
VERSION     NZ_JBHYJK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43797638
            Assembly: GCF_042740735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kitasatospora papulosa
  ORGANISM  Kitasatospora papulosa
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Kitasatospora.
REFERENCE   1  (bases 1 to 7814363)
  AUTHORS   Kalkreuter,E., Kautsar,S.A., Yang,D., Bader,C.D., Teijaro,C.N.,
            Fluegel,L., Davis,C.M., Simpson,J.R., Lauterbach,L., Steele,A.D.,
            Gui,C., Meng,S., Li,G., Viehrig,K., Ye,F., Su,P., Kiefer,A.F.,
            Nichols,A., Cepeda,A.J., Yan,W., Fan,B., Jiang,Y., Adhikari,A.,
            Zheng,C.-J., Schuster,L., Cowan,T.M., Smanski,M.J., Chevrette,M.G.,
            De Carvalho,L.P.S. and Shen,B.
  TITLE     The Natural Products Discovery Center: Release of the First 8490
            Sequenced Strains for Exploring Actinobacteria Biosynthetic
            Diversity
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7814363)
  AUTHORS   Kalkreuter,E., Kautsar,S.A., Yang,D., Bader,C.D., Teijaro,C.N.,
            Fluegel,L., Davis,C.M., Simpson,J.R., Lauterbach,L., Steele,A.D.,
            Gui,C., Meng,S., Li,G., Viehrig,K., Ye,F., Su,P., Kiefer,A.F.,
            Nichols,A., Cepeda,A.J., Yan,W., Fan,B., Jiang,Y., Adhikari,A.,
            Zheng,C.-J., Schuster,L., Cowan,T.M., Smanski,M.J., Chevrette,M.G.,
            De Carvalho,L.P.S. and Shen,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-SEP-2024) Natural Products Discovery Center, The
            Herbert Wertheim UF Scripps Institute for Biomedical Innovation &
            Technology, 110 Scripps Way, Jupiter, FL 33458, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBHYJK000000000.1.
            The Kitasatospora papulosa whole genome shotgun (WGS) project has
            the project accession NZ_JBHYJK000000000.  This version of the
            project (01) has the accession number NZ_JBHYJK010000000, and
            consists of sequences JBHYJK010000001-JBHYJK010000211.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 13.520173791072297x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_042740735.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:28:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,969
            CDSs (total)                      :: 6,894
            Genes (coding)                    :: 6,760
            CDSs (with protein)               :: 6,760
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 68
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 135
            CDSs (without protein)            :: 134
            Pseudo Genes (ambiguous residues) :: 0 of 135
            Pseudo Genes (frameshifted)       :: 44 of 135
            Pseudo Genes (incomplete)         :: 111 of 135
            Pseudo Genes (internal stop)      :: 6 of 135
            Pseudo Genes (multiple problems)  :: 25 of 135
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7814363
                     /organism="Kitasatospora papulosa"
                     /mol_type="genomic DNA"
                     /strain="NPDC059000"
                     /db_xref="taxon:1464011"
                     /geo_loc_name="China"
                     /collection_date="2010-01-01"
WGS         JBHYJK010000001-JBHYJK010000211
WGS_SCAFLD  NZ_JBHYJK010000001-NZ_JBHYJK010000211
//
LOCUS       NZ_JBMGJR010000000   3611373 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Janibacter zhangyanbonis strain G349, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBMGJR000000000
VERSION     NZ_JBMGJR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47295137
            Assembly: GCF_048984505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Janibacter zhangyanbonis
  ORGANISM  Janibacter zhangyanbonis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Intrasporangiaceae; Janibacter.
REFERENCE   1  (bases 1 to 3611373)
  AUTHORS   Zhang,M.
  TITLE     Janibacter sp.G349
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3611373)
  AUTHORS   Zhang,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2025) MOE Key Laboratory of Coal Environmental
            Pathogenicity and Prevention, Shanxi Medical University, No. 56
            Xinjian South Road, Yingze District, Taiyuan, Shanxi 030001, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBMGJR000000000.1.
            The Janibacter zhangyanbonis whole genome shotgun (WGS) project has
            the project accession NZ_JBMGJR000000000.  This version of the
            project (01) has the accession number NZ_JBMGJR010000000, and
            consists of sequences JBMGJR010000001-JBMGJR010000028.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAP denovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 285x
            Sequencing Technology  :: Illumina HiSeq PE150
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_048984505.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:50:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,522
            CDSs (total)                      :: 3,459
            Genes (coding)                    :: 3,435
            CDSs (with protein)               :: 3,435
            Genes (RNA)                       :: 63
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 9 of 24
            Pseudo Genes (incomplete)         :: 18 of 24
            Pseudo Genes (internal stop)      :: 1 of 24
            Pseudo Genes (multiple problems)  :: 4 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3611373
                     /organism="Janibacter zhangyanbonis"
                     /mol_type="genomic DNA"
                     /strain="G349"
                     /isolation_source="In situ coal"
                     /type_material="type strain of Janibacter zhangyanbonis"
                     /db_xref="taxon:3405424"
                     /geo_loc_name="China: Xinzhou city, Shanxi Province"
                     /collection_date="2024"
WGS         JBMGJR010000001-JBMGJR010000028
WGS_SCAFLD  NZ_JBMGJR010000001-NZ_JBMGJR010000028
//
LOCUS       NZ_VEZG01000000      1646489 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Helicobacter pylori strain KH0054, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VEZG00000000
VERSION     NZ_VEZG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12011810
            Assembly: GCF_006439845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Helicobacter pylori
  ORGANISM  Helicobacter pylori
            Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Helicobacteraceae; Helicobacter.
REFERENCE   1  (bases 1 to 1646489)
  AUTHORS   Tuan,V.P., Narith,D., Tshibangu-Kabamba,E., Dung,H.D.Q., Viet,P.T.,
            Sokomoth,S., Binh,T.T., Sokhem,S., Tri,T.D., Ngov,S., Tung,P.H.,
            Thuan,N.P.M., Truc,T.C., Phuc,B.H., Matsumoto,T., Fauzia,K.A.,
            Akada,J., Trang,T.T.H. and Yamaoka,Y.
  TITLE     A Next-Generation Sequencing-Based Approach to Identify Genetic
            Determinants of Antibiotic Resistance in Cambodian Helicobacter
            pylori Clinical Isolates
  JOURNAL   J Clin Med 8 (6), 858 (2019)
   PUBMED   31208076
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1646489)
  AUTHORS   Tuan,V.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-JUN-2019) Environmental and Preventive of Medicine,
            Oita University, 1-1 Idaigaoka, Hasama-Machi, Yufu, Oita 879-5593,
            Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VEZG00000000.1.
            The Helicobacter pylori whole genome shotgun (WGS) project has the
            project accession NZ_VEZG00000000.  This version of the project
            (01) has the accession number NZ_VEZG01000000, and consists of
            sequences VEZG01000001-VEZG01000066.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 17x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_006439845.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:19:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,628
            CDSs (total)                      :: 1,586
            Genes (coding)                    :: 1,487
            CDSs (with protein)               :: 1,487
            Genes (RNA)                       :: 42
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 36
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 99
            CDSs (without protein)            :: 99
            Pseudo Genes (ambiguous residues) :: 0 of 99
            Pseudo Genes (frameshifted)       :: 44 of 99
            Pseudo Genes (incomplete)         :: 48 of 99
            Pseudo Genes (internal stop)      :: 16 of 99
            Pseudo Genes (multiple problems)  :: 9 of 99
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1646489
                     /organism="Helicobacter pylori"
                     /mol_type="genomic DNA"
                     /strain="KH0054"
                     /isolation_source="stomach"
                     /host="Homo sapiens"
                     /db_xref="taxon:210"
                     /geo_loc_name="Cambodia: Phnom Penh"
                     /collection_date="2015"
                     /collected_by="Yoshio Yamaoka"
WGS         VEZG01000001-VEZG01000066
WGS_SCAFLD  NZ_VEZG01000001-NZ_VEZG01000066
//
LOCUS       NZ_CDVKPN010000000   3106929 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Henriciella pelagia isolate MarMAG_114282, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVKPN000000000
VERSION     NZ_CDVKPN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737377
            Assembly: GCF_977705055.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Henriciella pelagia (marine metagenome)
  ORGANISM  Henriciella pelagia
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomonadales; Hyphomonadaceae; Henriciella.
REFERENCE   1  (bases 1 to 3106929)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVKPN000000000.1.
            The Henriciella pelagia whole genome shotgun (WGS) project has the
            project accession NZ_CDVKPN000000000.  This version of the project
            (01) has the accession number NZ_CDVKPN010000000, and consists of
            sequences CDVKPN010000001-CDVKPN010000123.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977705055.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 18:03:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,198
            CDSs (total)                      :: 3,161
            Genes (coding)                    :: 3,094
            CDSs (with protein)               :: 3,094
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 5 of 67
            Pseudo Genes (incomplete)         :: 60 of 67
            Pseudo Genes (internal stop)      :: 5 of 67
            Pseudo Genes (multiple problems)  :: 3 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3106929
                     /organism="Henriciella pelagia"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_114282"
                     /isolation_source="Mariana Trench, free-living
                     microorganism in surface water"
                     /db_xref="taxon:1977912"
                     /environmental_sample
                     /geo_loc_name="Pacific Ocean"
                     /collection_date="2016-09-15"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVKPN010000001-CDVKPN010000123
WGS_SCAFLD  NZ_CDVKPN010000001-NZ_CDVKPN010000123
//
LOCUS       NZ_JBWBZB010000000   6238595 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Janthinobacterium lividum strain HP6A, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBWBZB000000000
VERSION     NZ_JBWBZB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56418701
            Assembly: GCF_056174825.1
KEYWORDS    WGS; RefSeq.
SOURCE      Janthinobacterium lividum
  ORGANISM  Janthinobacterium lividum
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
REFERENCE   1  (bases 1 to 6238595)
  AUTHORS   Haak,D.C.
  TITLE     Emma and Mychala sequence additions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6238595)
  AUTHORS   Haak,D.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2026) Biological Sciences, Virginia Tech, 926
            West Campus Drive, Blacksburg, VA 24061, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBZB000000000.1.
            The Janthinobacterium lividum whole genome shotgun (WGS) project
            has the project accession NZ_JBWBZB000000000.  This version of the
            project (01) has the accession number NZ_JBWBZB010000000, and
            consists of sequences JBWBZB010000001-JBWBZB010000003.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date             :: MAY-2021
            Assembly Method           :: Canu v. 1
            Assembly Name             :: 1
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: NA
            Genome Coverage           :: 50x
            Sequencing Technology     :: PacBio Sequel
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056174825.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:57:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,639
            CDSs (total)                      :: 5,516
            Genes (coding)                    :: 5,485
            CDSs (with protein)               :: 5,485
            Genes (RNA)                       :: 123
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 94
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 15 of 31
            Pseudo Genes (incomplete)         :: 18 of 31
            Pseudo Genes (internal stop)      :: 2 of 31
            Pseudo Genes (multiple problems)  :: 3 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6238595
                     /organism="Janthinobacterium lividum"
                     /mol_type="genomic DNA"
                     /strain="HP6A"
                     /isolation_source="field"
                     /host="amphibian"
                     /db_xref="taxon:29581"
                     /geo_loc_name="USA: Virginia,Blacksburg"
                     /lat_lon="37.229572 N 80.413840 W"
                     /collection_date="2012"
WGS         JBWBZB010000001-JBWBZB010000003
WGS_SCAFLD  NZ_JBWBZB010000001-NZ_JBWBZB010000003
//
LOCUS       NZ_JBWBYW010000000   6334908 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Janthinobacterium sp. BHSEK strain CC6l_Virginia, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JBWBYW000000000
VERSION     NZ_JBWBYW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56418709
            Assembly: GCF_056174705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Janthinobacterium sp. BHSEK
  ORGANISM  Janthinobacterium sp. BHSEK
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
REFERENCE   1  (bases 1 to 6334908)
  AUTHORS   Haak,D.C.
  TITLE     Emma and Mychala sequence additions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6334908)
  AUTHORS   Haak,D.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2026) Biological Sciences, Virginia Tech, 926
            West Campus Drive, Blacksburg, VA 24061, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBYW000000000.1.
            The Janthinobacterium sp. BHSEK whole genome shotgun (WGS) project
            has the project accession NZ_JBWBYW000000000.  This version of the
            project (01) has the accession number NZ_JBWBYW010000000, and
            consists of sequences JBWBYW010000001-JBWBYW010000280.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date             :: OCT-2025
            Assembly Method           :: GATB v. 2023
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: NA
            Genome Coverage           :: 100x
            Sequencing Technology     :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056174705.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 18:02:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,819
            CDSs (total)                      :: 5,644
            Genes (coding)                    :: 5,592
            CDSs (with protein)               :: 5,592
            Genes (RNA)                       :: 175
            rRNAs                             :: 12, 26, 32 (5S, 16S, 23S)
            complete rRNAs                    :: 12 (5S)
            partial rRNAs                     :: 26, 32 (16S, 23S)
            tRNAs                             :: 101
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 8 of 52
            Pseudo Genes (incomplete)         :: 46 of 52
            Pseudo Genes (internal stop)      :: 2 of 52
            Pseudo Genes (multiple problems)  :: 3 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6334908
                     /organism="Janthinobacterium sp. BHSEK"
                     /mol_type="genomic DNA"
                     /strain="CC6l_Virginia"
                     /isolation_source="field"
                     /host="amphibian"
                     /db_xref="taxon:2480809"
                     /geo_loc_name="USA: Virginia,Blacksburg"
                     /lat_lon="37.229572 N 80.413840 W"
                     /collection_date="2014"
WGS         JBWBYW010000001-JBWBYW010000280
WGS_SCAFLD  NZ_JBWBYW010000001-NZ_JBWBYW010000280
//
LOCUS       NZ_JBWBYX010000000   6336039 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Janthinobacterium sp. HH107 strain CC5V1_Virginia, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JBWBYX000000000
VERSION     NZ_JBWBYX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56418708
            Assembly: GCF_056174745.1
KEYWORDS    WGS; RefSeq.
SOURCE      Janthinobacterium sp. HH107
  ORGANISM  Janthinobacterium sp. HH107
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
REFERENCE   1  (bases 1 to 6336039)
  AUTHORS   Haak,D.C.
  TITLE     Emma and Mychala sequence additions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6336039)
  AUTHORS   Haak,D.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2026) Biological Sciences, Virginia Tech, 926
            West Campus Drive, Blacksburg, VA 24061, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBYX000000000.1.
            The Janthinobacterium sp. HH107 whole genome shotgun (WGS) project
            has the project accession NZ_JBWBYX000000000.  This version of the
            project (01) has the accession number NZ_JBWBYX010000000, and
            consists of sequences JBWBYX010000001-JBWBYX010000296.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date             :: OCT-2025
            Assembly Method           :: GATB v. 2023
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: NA
            Genome Coverage           :: 100x
            Sequencing Technology     :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056174745.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 18:11:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,830
            CDSs (total)                      :: 5,662
            Genes (coding)                    :: 5,608
            CDSs (with protein)               :: 5,608
            Genes (RNA)                       :: 168
            rRNAs                             :: 11, 22, 39 (5S, 16S, 23S)
            complete rRNAs                    :: 11 (5S)
            partial rRNAs                     :: 22, 39 (16S, 23S)
            tRNAs                             :: 92
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 8 of 54
            Pseudo Genes (incomplete)         :: 47 of 54
            Pseudo Genes (internal stop)      :: 1 of 54
            Pseudo Genes (multiple problems)  :: 2 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6336039
                     /organism="Janthinobacterium sp. HH107"
                     /mol_type="genomic DNA"
                     /strain="CC5V1_Virginia"
                     /isolation_source="field"
                     /host="amphibian"
                     /db_xref="taxon:1537279"
                     /geo_loc_name="USA: Virginia,Blacksburg"
                     /lat_lon="37.229572 N 80.413840 W"
                     /collection_date="2013"
WGS         JBWBYX010000001-JBWBYX010000296
WGS_SCAFLD  NZ_JBWBYX010000001-NZ_JBWBYX010000296
//
LOCUS       NZ_JBWBYV010000000   6323250 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Janthinobacterium sp. BHSEK strain CC6L_Virginia, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JBWBYV000000000
VERSION     NZ_JBWBYV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56418710
            Assembly: GCF_056174685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Janthinobacterium sp. BHSEK
  ORGANISM  Janthinobacterium sp. BHSEK
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Janthinobacterium.
REFERENCE   1  (bases 1 to 6323250)
  AUTHORS   Haak,D.C.
  TITLE     Emma and Mychala sequence additions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6323250)
  AUTHORS   Haak,D.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2026) Biological Sciences, Virginia Tech, 926
            West Campus Drive, Blacksburg, VA 24061, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBYV000000000.1.
            The Janthinobacterium sp. BHSEK whole genome shotgun (WGS) project
            has the project accession NZ_JBWBYV000000000.  This version of the
            project (01) has the accession number NZ_JBWBYV010000000, and
            consists of sequences JBWBYV010000001-JBWBYV010000290.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date             :: OCT-2025
            Assembly Method           :: GATB v. 2023
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: NA
            Genome Coverage           :: 100x
            Sequencing Technology     :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056174685.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 18:02:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,819
            CDSs (total)                      :: 5,652
            Genes (coding)                    :: 5,590
            CDSs (with protein)               :: 5,590
            Genes (RNA)                       :: 167
            rRNAs                             :: 12, 22, 32 (5S, 16S, 23S)
            complete rRNAs                    :: 12 (5S)
            partial rRNAs                     :: 22, 32 (16S, 23S)
            tRNAs                             :: 97
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 62
            CDSs (without protein)            :: 62
            Pseudo Genes (ambiguous residues) :: 0 of 62
            Pseudo Genes (frameshifted)       :: 9 of 62
            Pseudo Genes (incomplete)         :: 55 of 62
            Pseudo Genes (internal stop)      :: 2 of 62
            Pseudo Genes (multiple problems)  :: 3 of 62
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6323250
                     /organism="Janthinobacterium sp. BHSEK"
                     /mol_type="genomic DNA"
                     /strain="CC6L_Virginia"
                     /isolation_source="field"
                     /host="amphibian"
                     /db_xref="taxon:2480809"
                     /geo_loc_name="USA: Virginia,Blacksburg"
                     /lat_lon="37.229572 N 80.413840 W"
                     /collection_date="2015"
WGS         JBWBYV010000001-JBWBYV010000290
WGS_SCAFLD  NZ_JBWBYV010000001-NZ_JBWBYV010000290
//
LOCUS       NZ_VAIC01000000      2482372 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mannheimia haemolytica strain UGA-A6-134-1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VAIC00000000
VERSION     NZ_VAIC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10847990
            Assembly: GCF_007003635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2482372)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Genetic characterization of susceptible and multi-drug resistant
            Mannheimia haemolytica isolated from high-risk stocker calves prior
            to and after antimicrobial metaphylaxis
  JOURNAL   Vet Microbiol 235, 110-117 (2019)
   PUBMED   31282368
REFERENCE   2  (bases 1 to 2482372)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) POPH, Food Animal Health and Mangement
            Program, University of Georgia, 2200 College Station Road, Athens,
            GA 30602, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAIC00000000.1.
            The Mannheimia haemolytica whole genome shotgun (WGS) project has
            the project accession NZ_VAIC00000000.  This version of the project
            (01) has the accession number NZ_VAIC01000000, and consists of
            sequences VAIC01000001-VAIC01000118.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-JUN-2017
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 285x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007003635.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:11:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,511
            CDSs (total)                      :: 2,454
            Genes (coding)                    :: 2,374
            CDSs (with protein)               :: 2,374
            Genes (RNA)                       :: 57
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 80
            CDSs (without protein)            :: 80
            Pseudo Genes (ambiguous residues) :: 0 of 80
            Pseudo Genes (frameshifted)       :: 33 of 80
            Pseudo Genes (incomplete)         :: 42 of 80
            Pseudo Genes (internal stop)      :: 13 of 80
            Pseudo Genes (multiple problems)  :: 7 of 80
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2482372
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /strain="UGA-A6-134-1"
                     /isolation_source="week A6 calf 134 isolate 1"
                     /host="bovine"
                     /db_xref="taxon:75985"
                     /geo_loc_name="USA: Georgia"
                     /collection_date="2016-04-26"
                     /collected_by="Emily R. Snyder"
WGS         VAIC01000001-VAIC01000118
WGS_SCAFLD  NZ_VAIC01000001-NZ_VAIC01000118
//
LOCUS       NZ_VAHR01000000      2532817 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mannheimia haemolytica strain UGA-A3-57-1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VAHR00000000
VERSION     NZ_VAHR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10847979
            Assembly: GCF_007003855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2532817)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Genetic characterization of susceptible and multi-drug resistant
            Mannheimia haemolytica isolated from high-risk stocker calves prior
            to and after antimicrobial metaphylaxis
  JOURNAL   Vet Microbiol 235, 110-117 (2019)
   PUBMED   31282368
REFERENCE   2  (bases 1 to 2532817)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) POPH, Food Animal Health and Mangement
            Program, University of Georgia, 2200 College Station Road, Athens,
            GA 30602, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAHR00000000.1.
            The Mannheimia haemolytica whole genome shotgun (WGS) project has
            the project accession NZ_VAHR00000000.  This version of the project
            (01) has the accession number NZ_VAHR01000000, and consists of
            sequences VAHR01000001-VAHR01000173.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-JUN-2017
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 319x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007003855.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:14:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,615
            CDSs (total)                      :: 2,554
            Genes (coding)                    :: 2,461
            CDSs (with protein)               :: 2,461
            Genes (RNA)                       :: 61
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 93
            CDSs (without protein)            :: 93
            Pseudo Genes (ambiguous residues) :: 0 of 93
            Pseudo Genes (frameshifted)       :: 36 of 93
            Pseudo Genes (incomplete)         :: 51 of 93
            Pseudo Genes (internal stop)      :: 15 of 93
            Pseudo Genes (multiple problems)  :: 8 of 93
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2532817
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /strain="UGA-A3-57-1"
                     /isolation_source="week A3 calf 57 isolate 1"
                     /host="bovine"
                     /db_xref="taxon:75985"
                     /geo_loc_name="USA: Georgia"
                     /collection_date="2016-04-06"
                     /collected_by="Emily R. Snyder"
WGS         VAHR01000001-VAHR01000173
WGS_SCAFLD  NZ_VAHR01000001-NZ_VAHR01000173
//
LOCUS       NZ_VAHX01000000      2512249 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mannheimia haemolytica strain UGA-A5-104-2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VAHX00000000
VERSION     NZ_VAHX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10847985
            Assembly: GCF_007003725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2512249)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Genetic characterization of susceptible and multi-drug resistant
            Mannheimia haemolytica isolated from high-risk stocker calves prior
            to and after antimicrobial metaphylaxis
  JOURNAL   Vet Microbiol 235, 110-117 (2019)
   PUBMED   31282368
REFERENCE   2  (bases 1 to 2512249)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) POPH, Food Animal Health and Mangement
            Program, University of Georgia, 2200 College Station Road, Athens,
            GA 30602, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAHX00000000.1.
            The Mannheimia haemolytica whole genome shotgun (WGS) project has
            the project accession NZ_VAHX00000000.  This version of the project
            (01) has the accession number NZ_VAHX01000000, and consists of
            sequences VAHX01000001-VAHX01000102.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-JUN-2017
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 336x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007003725.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:08:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,551
            CDSs (total)                      :: 2,491
            Genes (coding)                    :: 2,380
            CDSs (with protein)               :: 2,380
            Genes (RNA)                       :: 60
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 112
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 112
            Pseudo Genes (frameshifted)       :: 47 of 112
            Pseudo Genes (incomplete)         :: 54 of 112
            Pseudo Genes (internal stop)      :: 17 of 112
            Pseudo Genes (multiple problems)  :: 7 of 112
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2512249
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /strain="UGA-A5-104-2"
                     /isolation_source="week A5 calf 104 isolate 2"
                     /host="bovine"
                     /db_xref="taxon:75985"
                     /geo_loc_name="USA: Georgia"
                     /collection_date="2016-04-19"
                     /collected_by="Emily R. Snyder"
WGS         VAHX01000001-VAHX01000102
WGS_SCAFLD  NZ_VAHX01000001-NZ_VAHX01000102
//
LOCUS       NZ_VAIA01000000      2522974 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mannheimia haemolytica strain UGA-A5-126-1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VAIA00000000
VERSION     NZ_VAIA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10847988
            Assembly: GCF_007003675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2522974)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Genetic characterization of susceptible and multi-drug resistant
            Mannheimia haemolytica isolated from high-risk stocker calves prior
            to and after antimicrobial metaphylaxis
  JOURNAL   Vet Microbiol 235, 110-117 (2019)
   PUBMED   31282368
REFERENCE   2  (bases 1 to 2522974)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) POPH, Food Animal Health and Mangement
            Program, University of Georgia, 2200 College Station Road, Athens,
            GA 30602, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAIA00000000.1.
            The Mannheimia haemolytica whole genome shotgun (WGS) project has
            the project accession NZ_VAIA00000000.  This version of the project
            (01) has the accession number NZ_VAIA01000000, and consists of
            sequences VAIA01000001-VAIA01000149.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-JUN-2017
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 251x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007003675.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:07:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,599
            CDSs (total)                      :: 2,534
            Genes (coding)                    :: 2,443
            CDSs (with protein)               :: 2,443
            Genes (RNA)                       :: 65
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 91
            CDSs (without protein)            :: 91
            Pseudo Genes (ambiguous residues) :: 0 of 91
            Pseudo Genes (frameshifted)       :: 32 of 91
            Pseudo Genes (incomplete)         :: 53 of 91
            Pseudo Genes (internal stop)      :: 14 of 91
            Pseudo Genes (multiple problems)  :: 7 of 91
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2522974
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /strain="UGA-A5-126-1"
                     /isolation_source="week A5 calf 126 isolate 1"
                     /host="bovine"
                     /db_xref="taxon:75985"
                     /geo_loc_name="USA: Georgia"
                     /collection_date="2016-04-21"
                     /collected_by="Emily R. Snyder"
WGS         VAIA01000001-VAIA01000149
WGS_SCAFLD  NZ_VAIA01000001-NZ_VAIA01000149
//
LOCUS       NZ_VAII01000000      2513484 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mannheimia haemolytica strain UGA-A6-159-1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VAII00000000
VERSION     NZ_VAII00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10847996
            Assembly: GCF_007003495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2513484)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Genetic characterization of susceptible and multi-drug resistant
            Mannheimia haemolytica isolated from high-risk stocker calves prior
            to and after antimicrobial metaphylaxis
  JOURNAL   Vet Microbiol 235, 110-117 (2019)
   PUBMED   31282368
REFERENCE   2  (bases 1 to 2513484)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) POPH, Food Animal Health and Mangement
            Program, University of Georgia, 2200 College Station Road, Athens,
            GA 30602, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAII00000000.1.
            The Mannheimia haemolytica whole genome shotgun (WGS) project has
            the project accession NZ_VAII00000000.  This version of the project
            (01) has the accession number NZ_VAII01000000, and consists of
            sequences VAII01000001-VAII01000102.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-JUN-2017
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 349x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007003495.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:05:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,566
            CDSs (total)                      :: 2,507
            Genes (coding)                    :: 2,425
            CDSs (with protein)               :: 2,425
            Genes (RNA)                       :: 59
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 34 of 82
            Pseudo Genes (incomplete)         :: 42 of 82
            Pseudo Genes (internal stop)      :: 14 of 82
            Pseudo Genes (multiple problems)  :: 7 of 82
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2513484
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /strain="UGA-A6-159-1"
                     /isolation_source="week A6 calf 159 isolate 1"
                     /host="bovine"
                     /db_xref="taxon:75985"
                     /geo_loc_name="USA: Georgia"
                     /collection_date="2016-04-28"
                     /collected_by="Emily R. Snyder"
WGS         VAII01000001-VAII01000102
WGS_SCAFLD  NZ_VAII01000001-NZ_VAII01000102
//
LOCUS       NZ_VAIN01000000      2503368 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mannheimia haemolytica strain UGA-A7-167-2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VAIN00000000
VERSION     NZ_VAIN00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10848001
            Assembly: GCF_007003405.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2503368)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Genetic characterization of susceptible and multi-drug resistant
            Mannheimia haemolytica isolated from high-risk stocker calves prior
            to and after antimicrobial metaphylaxis
  JOURNAL   Vet Microbiol 235, 110-117 (2019)
   PUBMED   31282368
REFERENCE   2  (bases 1 to 2503368)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) POPH, Food Animal Health and Mangement
            Program, University of Georgia, 2200 College Station Road, Athens,
            GA 30602, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAIN00000000.1.
            The Mannheimia haemolytica whole genome shotgun (WGS) project has
            the project accession NZ_VAIN00000000.  This version of the project
            (01) has the accession number NZ_VAIN01000000, and consists of
            sequences VAIN01000001-VAIN01000118.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-JUN-2017
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 263x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007003405.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:08:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,560
            CDSs (total)                      :: 2,499
            Genes (coding)                    :: 2,419
            CDSs (with protein)               :: 2,419
            Genes (RNA)                       :: 61
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 80
            CDSs (without protein)            :: 80
            Pseudo Genes (ambiguous residues) :: 0 of 80
            Pseudo Genes (frameshifted)       :: 35 of 80
            Pseudo Genes (incomplete)         :: 39 of 80
            Pseudo Genes (internal stop)      :: 14 of 80
            Pseudo Genes (multiple problems)  :: 7 of 80
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2503368
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /strain="UGA-A7-167-2"
                     /isolation_source="week A7 calf 167 isolate 2"
                     /host="bovine"
                     /db_xref="taxon:75985"
                     /geo_loc_name="USA: Georgia"
                     /collection_date="2016-05-04"
                     /collected_by="Emily R. Snyder"
WGS         VAIN01000001-VAIN01000118
WGS_SCAFLD  NZ_VAIN01000001-NZ_VAIN01000118
//
LOCUS       NZ_VAHW01000000      2513955 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mannheimia haemolytica strain UGA-A5-102-3, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VAHW00000000
VERSION     NZ_VAHW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10847984
            Assembly: GCF_007003775.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2513955)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Genetic characterization of susceptible and multi-drug resistant
            Mannheimia haemolytica isolated from high-risk stocker calves prior
            to and after antimicrobial metaphylaxis
  JOURNAL   Vet Microbiol 235, 110-117 (2019)
   PUBMED   31282368
REFERENCE   2  (bases 1 to 2513955)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) POPH, Food Animal Health and Mangement
            Program, University of Georgia, 2200 College Station Road, Athens,
            GA 30602, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAHW00000000.1.
            The Mannheimia haemolytica whole genome shotgun (WGS) project has
            the project accession NZ_VAHW00000000.  This version of the project
            (01) has the accession number NZ_VAHW01000000, and consists of
            sequences VAHW01000001-VAHW01000114.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-JUN-2017
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 313x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007003775.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:07:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,560
            CDSs (total)                      :: 2,500
            Genes (coding)                    :: 2,425
            CDSs (with protein)               :: 2,425
            Genes (RNA)                       :: 60
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 33 of 75
            Pseudo Genes (incomplete)         :: 36 of 75
            Pseudo Genes (internal stop)      :: 14 of 75
            Pseudo Genes (multiple problems)  :: 7 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2513955
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /strain="UGA-A5-102-3"
                     /isolation_source="week A5 calf 102 isolate 3"
                     /host="bovine"
                     /db_xref="taxon:75985"
                     /geo_loc_name="USA: Georgia"
                     /collection_date="2016-04-19"
                     /collected_by="Emily R. Snyder"
WGS         VAHW01000001-VAHW01000114
WGS_SCAFLD  NZ_VAHW01000001-NZ_VAHW01000114
//
LOCUS       NZ_JBPXXJ010000000   2879289 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL76, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXXJ000000000
VERSION     NZ_JBPXXJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087015
            Assembly: GCF_051845995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2879289)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 2879289)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXXJ000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXXJ000000000.  This version of the
            project (01) has the accession number NZ_JBPXXJ010000000, and
            consists of sequences JBPXXJ010000001-JBPXXJ010000010.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845995.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:28:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,906
            CDSs (total)                      :: 2,841
            Genes (coding)                    :: 2,818
            CDSs (with protein)               :: 2,818
            Genes (RNA)                       :: 65
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 23
            CDSs (without protein)            :: 23
            Pseudo Genes (ambiguous residues) :: 0 of 23
            Pseudo Genes (frameshifted)       :: 9 of 23
            Pseudo Genes (incomplete)         :: 10 of 23
            Pseudo Genes (internal stop)      :: 7 of 23
            Pseudo Genes (multiple problems)  :: 3 of 23
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2879289
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL76"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXXJ010000001-JBPXXJ010000010
WGS_SCAFLD  NZ_JBPXXJ010000001-NZ_JBPXXJ010000010
//
LOCUS       NZ_JBPXXF010000000   2838367 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL51, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXXF000000000
VERSION     NZ_JBPXXF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087011
            Assembly: GCF_051846055.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2838367)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 2838367)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXXF000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXXF000000000.  This version of the
            project (01) has the accession number NZ_JBPXXF010000000, and
            consists of sequences JBPXXF010000001-JBPXXF010000010.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051846055.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:31:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,845
            CDSs (total)                      :: 2,780
            Genes (coding)                    :: 2,760
            CDSs (with protein)               :: 2,760
            Genes (RNA)                       :: 65
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 8 of 20
            Pseudo Genes (incomplete)         :: 9 of 20
            Pseudo Genes (internal stop)      :: 6 of 20
            Pseudo Genes (multiple problems)  :: 3 of 20
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2838367
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL51"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXXF010000001-JBPXXF010000010
WGS_SCAFLD  NZ_JBPXXF010000001-NZ_JBPXXF010000010
//
LOCUS       NZ_VAIO01000000      2511385 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mannheimia haemolytica strain UGA-A7-170-1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VAIO00000000
VERSION     NZ_VAIO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10848002
            Assembly: GCF_007003415.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2511385)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Genetic characterization of susceptible and multi-drug resistant
            Mannheimia haemolytica isolated from high-risk stocker calves prior
            to and after antimicrobial metaphylaxis
  JOURNAL   Vet Microbiol 235, 110-117 (2019)
   PUBMED   31282368
REFERENCE   2  (bases 1 to 2511385)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) POPH, Food Animal Health and Mangement
            Program, University of Georgia, 2200 College Station Road, Athens,
            GA 30602, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAIO00000000.1.
            The Mannheimia haemolytica whole genome shotgun (WGS) project has
            the project accession NZ_VAIO00000000.  This version of the project
            (01) has the accession number NZ_VAIO01000000, and consists of
            sequences VAIO01000001-VAIO01000130.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-JUN-2017
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 254x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007003415.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:02:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,569
            CDSs (total)                      :: 2,511
            Genes (coding)                    :: 2,425
            CDSs (with protein)               :: 2,425
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 86
            CDSs (without protein)            :: 86
            Pseudo Genes (ambiguous residues) :: 0 of 86
            Pseudo Genes (frameshifted)       :: 34 of 86
            Pseudo Genes (incomplete)         :: 44 of 86
            Pseudo Genes (internal stop)      :: 16 of 86
            Pseudo Genes (multiple problems)  :: 7 of 86
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2511385
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /strain="UGA-A7-170-1"
                     /isolation_source="week A7 calf 170 isolate 1"
                     /host="bovine"
                     /db_xref="taxon:75985"
                     /geo_loc_name="USA: Georgia"
                     /collection_date="2016-05-04"
                     /collected_by="Emily R. Snyder"
WGS         VAIO01000001-VAIO01000130
WGS_SCAFLD  NZ_VAIO01000001-NZ_VAIO01000130
//
LOCUS       NZ_VAIL01000000      2471365 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mannheimia haemolytica strain UGA-A7-163-2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VAIL00000000
VERSION     NZ_VAIL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10847999
            Assembly: GCF_007003425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2471365)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Genetic characterization of susceptible and multi-drug resistant
            Mannheimia haemolytica isolated from high-risk stocker calves prior
            to and after antimicrobial metaphylaxis
  JOURNAL   Vet Microbiol 235, 110-117 (2019)
   PUBMED   31282368
REFERENCE   2  (bases 1 to 2471365)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) POPH, Food Animal Health and Mangement
            Program, University of Georgia, 2200 College Station Road, Athens,
            GA 30602, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAIL00000000.1.
            The Mannheimia haemolytica whole genome shotgun (WGS) project has
            the project accession NZ_VAIL00000000.  This version of the project
            (01) has the accession number NZ_VAIL01000000, and consists of
            sequences VAIL01000001-VAIL01000118.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-JUN-2017
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 222x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007003425.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:04:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,521
            CDSs (total)                      :: 2,464
            Genes (coding)                    :: 2,372
            CDSs (with protein)               :: 2,372
            Genes (RNA)                       :: 57
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 35 of 92
            Pseudo Genes (incomplete)         :: 48 of 92
            Pseudo Genes (internal stop)      :: 17 of 92
            Pseudo Genes (multiple problems)  :: 7 of 92
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2471365
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /strain="UGA-A7-163-2"
                     /isolation_source="week A7 calf 163 isolate 2"
                     /host="bovine"
                     /db_xref="taxon:75985"
                     /geo_loc_name="USA: Georgia"
                     /collection_date="2016-05-04"
                     /collected_by="Emily R. Snyder"
WGS         VAIL01000001-VAIL01000118
WGS_SCAFLD  NZ_VAIL01000001-NZ_VAIL01000118
//
LOCUS       NZ_JBPXXH010000000   2876026 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL48, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXXH000000000
VERSION     NZ_JBPXXH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087013
            Assembly: GCF_051846035.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2876026)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 2876026)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXXH000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXXH000000000.  This version of the
            project (01) has the accession number NZ_JBPXXH010000000, and
            consists of sequences JBPXXH010000001-JBPXXH010000013.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051846035.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:29:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,897
            CDSs (total)                      :: 2,830
            Genes (coding)                    :: 2,808
            CDSs (with protein)               :: 2,808
            Genes (RNA)                       :: 67
            rRNAs                             :: 4, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 2 (5S, 16S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 10 of 22
            Pseudo Genes (incomplete)         :: 10 of 22
            Pseudo Genes (internal stop)      :: 4 of 22
            Pseudo Genes (multiple problems)  :: 2 of 22
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2876026
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL48"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXXH010000001-JBPXXH010000013
WGS_SCAFLD  NZ_JBPXXH010000001-NZ_JBPXXH010000013
//
LOCUS       NZ_JBPXXE010000000   2838237 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DS9-Lm, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXXE000000000
VERSION     NZ_JBPXXE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087010
            Assembly: GCF_051846075.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2838237)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 2838237)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXXE000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXXE000000000.  This version of the
            project (01) has the accession number NZ_JBPXXE010000000, and
            consists of sequences JBPXXE010000001-JBPXXE010000010.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051846075.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:23:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,845
            CDSs (total)                      :: 2,780
            Genes (coding)                    :: 2,756
            CDSs (with protein)               :: 2,756
            Genes (RNA)                       :: 65
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 12 of 24
            Pseudo Genes (incomplete)         :: 8 of 24
            Pseudo Genes (internal stop)      :: 7 of 24
            Pseudo Genes (multiple problems)  :: 3 of 24
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2838237
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DS9-Lm"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXXE010000001-JBPXXE010000010
WGS_SCAFLD  NZ_JBPXXE010000001-NZ_JBPXXE010000010
//
LOCUS       NZ_JBPXXK010000000   2880253 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL86, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXXK000000000
VERSION     NZ_JBPXXK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087016
            Assembly: GCF_051845955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2880253)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 2880253)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXXK000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXXK000000000.  This version of the
            project (01) has the accession number NZ_JBPXXK010000000, and
            consists of sequences JBPXXK010000001-JBPXXK010000018.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845955.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:29:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,886
            CDSs (total)                      :: 2,818
            Genes (coding)                    :: 2,788
            CDSs (with protein)               :: 2,788
            Genes (RNA)                       :: 68
            rRNAs                             :: 5, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 1 (5S, 16S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 30
            CDSs (without protein)            :: 30
            Pseudo Genes (ambiguous residues) :: 0 of 30
            Pseudo Genes (frameshifted)       :: 15 of 30
            Pseudo Genes (incomplete)         :: 15 of 30
            Pseudo Genes (internal stop)      :: 5 of 30
            Pseudo Genes (multiple problems)  :: 5 of 30
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2880253
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL86"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXXK010000001-JBPXXK010000018
WGS_SCAFLD  NZ_JBPXXK010000001-NZ_JBPXXK010000018
//
LOCUS       NZ_VAJK01000000      2680050 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mannheimia haemolytica strain UGA-R7-170-1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VAJK00000000
VERSION     NZ_VAJK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10848024
            Assembly: GCF_007002905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2680050)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Genetic characterization of susceptible and multi-drug resistant
            Mannheimia haemolytica isolated from high-risk stocker calves prior
            to and after antimicrobial metaphylaxis
  JOURNAL   Vet Microbiol 235, 110-117 (2019)
   PUBMED   31282368
REFERENCE   2  (bases 1 to 2680050)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) POPH, Food Animal Health and Mangement
            Program, University of Georgia, 2200 College Station Road, Athens,
            GA 30602, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAJK00000000.1.
            The Mannheimia haemolytica whole genome shotgun (WGS) project has
            the project accession NZ_VAJK00000000.  This version of the project
            (01) has the accession number NZ_VAJK01000000, and consists of
            sequences VAJK01000001-VAJK01000115.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-JUN-2017
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 203x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007002905.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:06:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,794
            CDSs (total)                      :: 2,738
            Genes (coding)                    :: 2,639
            CDSs (with protein)               :: 2,639
            Genes (RNA)                       :: 56
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 99
            CDSs (without protein)            :: 99
            Pseudo Genes (ambiguous residues) :: 0 of 99
            Pseudo Genes (frameshifted)       :: 37 of 99
            Pseudo Genes (incomplete)         :: 59 of 99
            Pseudo Genes (internal stop)      :: 7 of 99
            Pseudo Genes (multiple problems)  :: 4 of 99
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2680050
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /strain="UGA-R7-170-1"
                     /isolation_source="week R7 calf 170 isolate 1"
                     /host="bovine"
                     /db_xref="taxon:75985"
                     /geo_loc_name="USA: Georgia"
                     /collection_date="2016-05-16"
                     /collected_by="Emily R. Snyder"
WGS         VAJK01000001-VAJK01000115
WGS_SCAFLD  NZ_VAJK01000001-NZ_VAJK01000115
//
LOCUS       NZ_VAIR01000000      2683069 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mannheimia haemolytica strain UGA-R3-57-1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VAIR00000000
VERSION     NZ_VAIR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10848005
            Assembly: GCF_007003325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2683069)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Genetic characterization of susceptible and multi-drug resistant
            Mannheimia haemolytica isolated from high-risk stocker calves prior
            to and after antimicrobial metaphylaxis
  JOURNAL   Vet Microbiol 235, 110-117 (2019)
   PUBMED   31282368
REFERENCE   2  (bases 1 to 2683069)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) POPH, Food Animal Health and Mangement
            Program, University of Georgia, 2200 College Station Road, Athens,
            GA 30602, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAIR00000000.1.
            The Mannheimia haemolytica whole genome shotgun (WGS) project has
            the project accession NZ_VAIR00000000.  This version of the project
            (01) has the accession number NZ_VAIR01000000, and consists of
            sequences VAIR01000001-VAIR01000118.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-JUN-2017
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 206x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007003325.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:51:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,802
            CDSs (total)                      :: 2,740
            Genes (coding)                    :: 2,643
            CDSs (with protein)               :: 2,643
            Genes (RNA)                       :: 62
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 97
            CDSs (without protein)            :: 97
            Pseudo Genes (ambiguous residues) :: 0 of 97
            Pseudo Genes (frameshifted)       :: 37 of 97
            Pseudo Genes (incomplete)         :: 57 of 97
            Pseudo Genes (internal stop)      :: 7 of 97
            Pseudo Genes (multiple problems)  :: 4 of 97
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2683069
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /strain="UGA-R3-57-1"
                     /isolation_source="week R3 calf 57 isolate 1"
                     /host="bovine"
                     /db_xref="taxon:75985"
                     /geo_loc_name="USA: Georgia"
                     /collection_date="2016-04-18"
                     /collected_by="Emily R. Snyder"
WGS         VAIR01000001-VAIR01000118
WGS_SCAFLD  NZ_VAIR01000001-NZ_VAIR01000118
//
LOCUS       NZ_VAIM01000000      2506474 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mannheimia haemolytica strain UGA-A7-167-1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VAIM00000000
VERSION     NZ_VAIM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10848000
            Assembly: GCF_007003395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2506474)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Genetic characterization of susceptible and multi-drug resistant
            Mannheimia haemolytica isolated from high-risk stocker calves prior
            to and after antimicrobial metaphylaxis
  JOURNAL   Vet Microbiol 235, 110-117 (2019)
   PUBMED   31282368
REFERENCE   2  (bases 1 to 2506474)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) POPH, Food Animal Health and Mangement
            Program, University of Georgia, 2200 College Station Road, Athens,
            GA 30602, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAIM00000000.1.
            The Mannheimia haemolytica whole genome shotgun (WGS) project has
            the project accession NZ_VAIM00000000.  This version of the project
            (01) has the accession number NZ_VAIM01000000, and consists of
            sequences VAIM01000001-VAIM01000128.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-JUN-2017
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 206x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007003395.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:05:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,562
            CDSs (total)                      :: 2,502
            Genes (coding)                    :: 2,418
            CDSs (with protein)               :: 2,418
            Genes (RNA)                       :: 60
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 84
            CDSs (without protein)            :: 84
            Pseudo Genes (ambiguous residues) :: 0 of 84
            Pseudo Genes (frameshifted)       :: 35 of 84
            Pseudo Genes (incomplete)         :: 43 of 84
            Pseudo Genes (internal stop)      :: 14 of 84
            Pseudo Genes (multiple problems)  :: 7 of 84
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2506474
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /strain="UGA-A7-167-1"
                     /isolation_source="week A7 calf 167 isolate 1"
                     /host="bovine"
                     /db_xref="taxon:75985"
                     /geo_loc_name="USA: Georgia"
                     /collection_date="2016-05-04"
                     /collected_by="Emily R. Snyder"
WGS         VAIM01000001-VAIM01000128
WGS_SCAFLD  NZ_VAIM01000001-NZ_VAIM01000128
//
LOCUS       NZ_VAHY01000000      2509609 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mannheimia haemolytica strain UGA-A5-104-3, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VAHY00000000
VERSION     NZ_VAHY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10847986
            Assembly: GCF_007003735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2509609)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Genetic characterization of susceptible and multi-drug resistant
            Mannheimia haemolytica isolated from high-risk stocker calves prior
            to and after antimicrobial metaphylaxis
  JOURNAL   Vet Microbiol 235, 110-117 (2019)
   PUBMED   31282368
REFERENCE   2  (bases 1 to 2509609)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) POPH, Food Animal Health and Mangement
            Program, University of Georgia, 2200 College Station Road, Athens,
            GA 30602, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAHY00000000.1.
            The Mannheimia haemolytica whole genome shotgun (WGS) project has
            the project accession NZ_VAHY00000000.  This version of the project
            (01) has the accession number NZ_VAHY01000000, and consists of
            sequences VAHY01000001-VAHY01000093.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-JUN-2017
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 306x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007003735.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:03:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,535
            CDSs (total)                      :: 2,476
            Genes (coding)                    :: 2,382
            CDSs (with protein)               :: 2,382
            Genes (RNA)                       :: 59
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 95
            CDSs (without protein)            :: 94
            Pseudo Genes (ambiguous residues) :: 0 of 95
            Pseudo Genes (frameshifted)       :: 46 of 95
            Pseudo Genes (incomplete)         :: 38 of 95
            Pseudo Genes (internal stop)      :: 17 of 95
            Pseudo Genes (multiple problems)  :: 7 of 95
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2509609
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /strain="UGA-A5-104-3"
                     /isolation_source="week A5 calf 104 isolate 3"
                     /host="bovine"
                     /db_xref="taxon:75985"
                     /geo_loc_name="USA: Georgia"
                     /collection_date="2016-04-19"
                     /collected_by="Emily R. Snyder"
WGS         VAHY01000001-VAHY01000093
WGS_SCAFLD  NZ_VAHY01000001-NZ_VAHY01000093
//
LOCUS       NZ_VAHS01000000      2543104 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mannheimia haemolytica strain UGA-A4-71-1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VAHS00000000
VERSION     NZ_VAHS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10847980
            Assembly: GCF_007003815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2543104)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Genetic characterization of susceptible and multi-drug resistant
            Mannheimia haemolytica isolated from high-risk stocker calves prior
            to and after antimicrobial metaphylaxis
  JOURNAL   Vet Microbiol 235, 110-117 (2019)
   PUBMED   31282368
REFERENCE   2  (bases 1 to 2543104)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) POPH, Food Animal Health and Mangement
            Program, University of Georgia, 2200 College Station Road, Athens,
            GA 30602, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAHS00000000.1.
            The Mannheimia haemolytica whole genome shotgun (WGS) project has
            the project accession NZ_VAHS00000000.  This version of the project
            (01) has the accession number NZ_VAHS01000000, and consists of
            sequences VAHS01000001-VAHS01000174.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-JUN-2017
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 344x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007003815.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:08:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,643
            CDSs (total)                      :: 2,585
            Genes (coding)                    :: 2,485
            CDSs (with protein)               :: 2,485
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 33 of 100
            Pseudo Genes (incomplete)         :: 60 of 100
            Pseudo Genes (internal stop)      :: 16 of 100
            Pseudo Genes (multiple problems)  :: 8 of 100
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2543104
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /strain="UGA-A4-71-1"
                     /isolation_source="week A4 calf 71 isolate 1"
                     /host="bovine"
                     /db_xref="taxon:75985"
                     /geo_loc_name="USA: Georgia"
                     /collection_date="2016-04-12"
                     /collected_by="Emily R. Snyder"
WGS         VAHS01000001-VAHS01000174
WGS_SCAFLD  NZ_VAHS01000001-NZ_VAHS01000174
//
LOCUS       NZ_JBIWZG010000000   5711072 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1225, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIWZG000000000
VERSION     NZ_JBIWZG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247373
            Assembly: GCF_045618465.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5711072)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIWZG000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIWZG000000000.  This version of the
            project (01) has the accession number NZ_JBIWZG010000000, and
            consists of sequences JBIWZG010000001-JBIWZG010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 707x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045618465.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:20:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,722
            CDSs (total)                      :: 5,602
            Genes (coding)                    :: 5,440
            CDSs (with protein)               :: 5,440
            Genes (RNA)                       :: 120
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 8
            Pseudo Genes (total)              :: 162
            CDSs (without protein)            :: 162
            Pseudo Genes (ambiguous residues) :: 0 of 162
            Pseudo Genes (frameshifted)       :: 96 of 162
            Pseudo Genes (incomplete)         :: 69 of 162
            Pseudo Genes (internal stop)      :: 20 of 162
            Pseudo Genes (multiple problems)  :: 18 of 162
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5711072
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1225"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIWZG010000001-JBIWZG010000007
WGS_SCAFLD  NZ_JBIWZG010000001-NZ_JBIWZG010000007
//
LOCUS       NZ_VAIV01000000      2687153 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mannheimia haemolytica strain UGA-R4-85-1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VAIV00000000
VERSION     NZ_VAIV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10848009
            Assembly: GCF_007003255.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2687153)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Genetic characterization of susceptible and multi-drug resistant
            Mannheimia haemolytica isolated from high-risk stocker calves prior
            to and after antimicrobial metaphylaxis
  JOURNAL   Vet Microbiol 235, 110-117 (2019)
   PUBMED   31282368
REFERENCE   2  (bases 1 to 2687153)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) POPH, Food Animal Health and Mangement
            Program, University of Georgia, 2200 College Station Road, Athens,
            GA 30602, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAIV00000000.1.
            The Mannheimia haemolytica whole genome shotgun (WGS) project has
            the project accession NZ_VAIV00000000.  This version of the project
            (01) has the accession number NZ_VAIV01000000, and consists of
            sequences VAIV01000001-VAIV01000121.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-JUN-2017
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 152x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007003255.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:08:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,817
            CDSs (total)                      :: 2,756
            Genes (coding)                    :: 2,653
            CDSs (with protein)               :: 2,653
            Genes (RNA)                       :: 61
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 103
            CDSs (without protein)            :: 103
            Pseudo Genes (ambiguous residues) :: 0 of 103
            Pseudo Genes (frameshifted)       :: 37 of 103
            Pseudo Genes (incomplete)         :: 63 of 103
            Pseudo Genes (internal stop)      :: 7 of 103
            Pseudo Genes (multiple problems)  :: 4 of 103
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2687153
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /strain="UGA-R4-85-1"
                     /isolation_source="week R4 calf 85 isolate 1"
                     /host="bovine"
                     /db_xref="taxon:75985"
                     /geo_loc_name="USA: Georgia"
                     /collection_date="2016-04-25"
                     /collected_by="Emily R. Snyder"
WGS         VAIV01000001-VAIV01000121
WGS_SCAFLD  NZ_VAIV01000001-NZ_VAIV01000121
//
LOCUS       NZ_JBPXXW010000000   2909562 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DS6-1-List, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXXW000000000
VERSION     NZ_JBPXXW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087028
            Assembly: GCF_051845715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2909562)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 2909562)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXXW000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXXW000000000.  This version of the
            project (01) has the accession number NZ_JBPXXW010000000, and
            consists of sequences JBPXXW010000001-JBPXXW010000007.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845715.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:32:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,956
            CDSs (total)                      :: 2,890
            Genes (coding)                    :: 2,868
            CDSs (with protein)               :: 2,868
            Genes (RNA)                       :: 66
            rRNAs                             :: 5, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 4, 2 (5S, 16S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 13 of 22
            Pseudo Genes (incomplete)         :: 8 of 22
            Pseudo Genes (internal stop)      :: 4 of 22
            Pseudo Genes (multiple problems)  :: 3 of 22
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2909562
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DS6-1-List"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXXW010000001-JBPXXW010000007
WGS_SCAFLD  NZ_JBPXXW010000001-NZ_JBPXXW010000007
//
LOCUS       NZ_VAIF01000000      2484157 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mannheimia haemolytica strain UGA-A6-141-3, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VAIF00000000
VERSION     NZ_VAIF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10847993
            Assembly: GCF_007003565.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2484157)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Genetic characterization of susceptible and multi-drug resistant
            Mannheimia haemolytica isolated from high-risk stocker calves prior
            to and after antimicrobial metaphylaxis
  JOURNAL   Vet Microbiol 235, 110-117 (2019)
   PUBMED   31282368
REFERENCE   2  (bases 1 to 2484157)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) POPH, Food Animal Health and Mangement
            Program, University of Georgia, 2200 College Station Road, Athens,
            GA 30602, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAIF00000000.1.
            The Mannheimia haemolytica whole genome shotgun (WGS) project has
            the project accession NZ_VAIF00000000.  This version of the project
            (01) has the accession number NZ_VAIF01000000, and consists of
            sequences VAIF01000001-VAIF01000123.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-JUN-2017
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 265x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007003565.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:09:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,520
            CDSs (total)                      :: 2,459
            Genes (coding)                    :: 2,373
            CDSs (with protein)               :: 2,373
            Genes (RNA)                       :: 61
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 86
            CDSs (without protein)            :: 86
            Pseudo Genes (ambiguous residues) :: 0 of 86
            Pseudo Genes (frameshifted)       :: 34 of 86
            Pseudo Genes (incomplete)         :: 44 of 86
            Pseudo Genes (internal stop)      :: 18 of 86
            Pseudo Genes (multiple problems)  :: 9 of 86
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2484157
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /strain="UGA-A6-141-3"
                     /isolation_source="week A6 calf 141 isolate 3"
                     /host="bovine"
                     /db_xref="taxon:75985"
                     /geo_loc_name="USA: Georgia"
                     /collection_date="2016-04-27"
                     /collected_by="Emily R. Snyder"
WGS         VAIF01000001-VAIF01000123
WGS_SCAFLD  NZ_VAIF01000001-NZ_VAIF01000123
//
LOCUS       NZ_VAHU01000000      2525923 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mannheimia haemolytica strain UGA-A4-87-1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VAHU00000000
VERSION     NZ_VAHU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10847982
            Assembly: GCF_007003765.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2525923)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Genetic characterization of susceptible and multi-drug resistant
            Mannheimia haemolytica isolated from high-risk stocker calves prior
            to and after antimicrobial metaphylaxis
  JOURNAL   Vet Microbiol 235, 110-117 (2019)
   PUBMED   31282368
REFERENCE   2  (bases 1 to 2525923)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) POPH, Food Animal Health and Mangement
            Program, University of Georgia, 2200 College Station Road, Athens,
            GA 30602, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAHU00000000.1.
            The Mannheimia haemolytica whole genome shotgun (WGS) project has
            the project accession NZ_VAHU00000000.  This version of the project
            (01) has the accession number NZ_VAHU01000000, and consists of
            sequences VAHU01000001-VAHU01000178.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-JUN-2017
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 314x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007003765.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:06:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,601
            CDSs (total)                      :: 2,545
            Genes (coding)                    :: 2,454
            CDSs (with protein)               :: 2,454
            Genes (RNA)                       :: 56
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 91
            CDSs (without protein)            :: 91
            Pseudo Genes (ambiguous residues) :: 0 of 91
            Pseudo Genes (frameshifted)       :: 34 of 91
            Pseudo Genes (incomplete)         :: 52 of 91
            Pseudo Genes (internal stop)      :: 14 of 91
            Pseudo Genes (multiple problems)  :: 8 of 91
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2525923
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /strain="UGA-A4-87-1"
                     /isolation_source="week A4 calf 87 isolate 1"
                     /host="bovine"
                     /db_xref="taxon:75985"
                     /geo_loc_name="USA: Georgia"
                     /collection_date="2016-04-13"
                     /collected_by="Emily R. Snyder"
WGS         VAHU01000001-VAHU01000178
WGS_SCAFLD  NZ_VAHU01000001-NZ_VAHU01000178
//
LOCUS       NZ_VAIE01000000      2490810 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mannheimia haemolytica strain UGA-A6-141-1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VAIE00000000
VERSION     NZ_VAIE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10847992
            Assembly: GCF_007003585.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2490810)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Genetic characterization of susceptible and multi-drug resistant
            Mannheimia haemolytica isolated from high-risk stocker calves prior
            to and after antimicrobial metaphylaxis
  JOURNAL   Vet Microbiol 235, 110-117 (2019)
   PUBMED   31282368
REFERENCE   2  (bases 1 to 2490810)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) POPH, Food Animal Health and Mangement
            Program, University of Georgia, 2200 College Station Road, Athens,
            GA 30602, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAIE00000000.1.
            The Mannheimia haemolytica whole genome shotgun (WGS) project has
            the project accession NZ_VAIE00000000.  This version of the project
            (01) has the accession number NZ_VAIE01000000, and consists of
            sequences VAIE01000001-VAIE01000143.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-JUN-2017
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 260x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007003585.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:10:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,539
            CDSs (total)                      :: 2,481
            Genes (coding)                    :: 2,384
            CDSs (with protein)               :: 2,384
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 97
            CDSs (without protein)            :: 97
            Pseudo Genes (ambiguous residues) :: 0 of 97
            Pseudo Genes (frameshifted)       :: 35 of 97
            Pseudo Genes (incomplete)         :: 56 of 97
            Pseudo Genes (internal stop)      :: 15 of 97
            Pseudo Genes (multiple problems)  :: 8 of 97
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2490810
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /strain="UGA-A6-141-1"
                     /isolation_source="week A6 calf 141 isolate 1"
                     /host="bovine"
                     /db_xref="taxon:75985"
                     /geo_loc_name="USA: Georgia"
                     /collection_date="2016-04-27"
                     /collected_by="Emily R. Snyder"
WGS         VAIE01000001-VAIE01000143
WGS_SCAFLD  NZ_VAIE01000001-NZ_VAIE01000143
//
LOCUS       NZ_VAIG01000000      2519666 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mannheimia haemolytica strain UGA-A6-143-1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VAIG00000000
VERSION     NZ_VAIG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10847994
            Assembly: GCF_007003535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2519666)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Genetic characterization of susceptible and multi-drug resistant
            Mannheimia haemolytica isolated from high-risk stocker calves prior
            to and after antimicrobial metaphylaxis
  JOURNAL   Vet Microbiol 235, 110-117 (2019)
   PUBMED   31282368
REFERENCE   2  (bases 1 to 2519666)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) POPH, Food Animal Health and Mangement
            Program, University of Georgia, 2200 College Station Road, Athens,
            GA 30602, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAIG00000000.1.
            The Mannheimia haemolytica whole genome shotgun (WGS) project has
            the project accession NZ_VAIG00000000.  This version of the project
            (01) has the accession number NZ_VAIG01000000, and consists of
            sequences VAIG01000001-VAIG01000130.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-JUN-2017
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 369x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007003535.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:08:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,582
            CDSs (total)                      :: 2,521
            Genes (coding)                    :: 2,434
            CDSs (with protein)               :: 2,434
            Genes (RNA)                       :: 61
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 87
            CDSs (without protein)            :: 87
            Pseudo Genes (ambiguous residues) :: 0 of 87
            Pseudo Genes (frameshifted)       :: 34 of 87
            Pseudo Genes (incomplete)         :: 47 of 87
            Pseudo Genes (internal stop)      :: 14 of 87
            Pseudo Genes (multiple problems)  :: 7 of 87
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2519666
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /strain="UGA-A6-143-1"
                     /isolation_source="week A6 calf 143 isolate 1"
                     /host="bovine"
                     /db_xref="taxon:75985"
                     /geo_loc_name="USA: Georgia"
                     /collection_date="2016-04-27"
                     /collected_by="Emily R. Snyder"
WGS         VAIG01000001-VAIG01000130
WGS_SCAFLD  NZ_VAIG01000001-NZ_VAIG01000130
//
LOCUS       NZ_JBPXYH010000000   2956018 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL47, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXYH000000000
VERSION     NZ_JBPXYH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087039
            Assembly: GCF_051845495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2956018)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 2956018)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXYH000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXYH000000000.  This version of the
            project (01) has the accession number NZ_JBPXYH010000000, and
            consists of sequences JBPXYH010000001-JBPXYH010000018.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845495.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:20:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,014
            CDSs (total)                      :: 2,946
            Genes (coding)                    :: 2,912
            CDSs (with protein)               :: 2,912
            Genes (RNA)                       :: 68
            rRNAs                             :: 5, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 1 (5S, 16S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 15 of 34
            Pseudo Genes (incomplete)         :: 20 of 34
            Pseudo Genes (internal stop)      :: 6 of 34
            Pseudo Genes (multiple problems)  :: 6 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2956018
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL47"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXYH010000001-JBPXYH010000018
WGS_SCAFLD  NZ_JBPXYH010000001-NZ_JBPXYH010000018
//
LOCUS       NZ_JBIWZL010000000   5700336 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1220, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIWZL000000000
VERSION     NZ_JBIWZL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247368
            Assembly: GCF_045618625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5700336)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIWZL000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIWZL000000000.  This version of the
            project (01) has the accession number NZ_JBIWZL010000000, and
            consists of sequences JBIWZL010000001-JBIWZL010000010.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 156x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045618625.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:17:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,716
            CDSs (total)                      :: 5,588
            Genes (coding)                    :: 5,371
            CDSs (with protein)               :: 5,371
            Genes (RNA)                       :: 128
            rRNAs                             :: 9, 9, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 9 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 217
            CDSs (without protein)            :: 217
            Pseudo Genes (ambiguous residues) :: 0 of 217
            Pseudo Genes (frameshifted)       :: 126 of 217
            Pseudo Genes (incomplete)         :: 102 of 217
            Pseudo Genes (internal stop)      :: 25 of 217
            Pseudo Genes (multiple problems)  :: 34 of 217
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5700336
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1220"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIWZL010000001-JBIWZL010000010
WGS_SCAFLD  NZ_JBIWZL010000001-NZ_JBIWZL010000010
//
LOCUS       NZ_VAIH01000000      2556427 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mannheimia haemolytica strain UGA-A6-146-1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VAIH00000000
VERSION     NZ_VAIH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10847995
            Assembly: GCF_007003505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2556427)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Genetic characterization of susceptible and multi-drug resistant
            Mannheimia haemolytica isolated from high-risk stocker calves prior
            to and after antimicrobial metaphylaxis
  JOURNAL   Vet Microbiol 235, 110-117 (2019)
   PUBMED   31282368
REFERENCE   2  (bases 1 to 2556427)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) POPH, Food Animal Health and Mangement
            Program, University of Georgia, 2200 College Station Road, Athens,
            GA 30602, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAIH00000000.1.
            The Mannheimia haemolytica whole genome shotgun (WGS) project has
            the project accession NZ_VAIH00000000.  This version of the project
            (01) has the accession number NZ_VAIH01000000, and consists of
            sequences VAIH01000001-VAIH01000161.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-JUN-2017
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 369x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007003505.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:06:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,641
            CDSs (total)                      :: 2,579
            Genes (coding)                    :: 2,487
            CDSs (with protein)               :: 2,487
            Genes (RNA)                       :: 62
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 32 of 92
            Pseudo Genes (incomplete)         :: 54 of 92
            Pseudo Genes (internal stop)      :: 14 of 92
            Pseudo Genes (multiple problems)  :: 7 of 92
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2556427
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /strain="UGA-A6-146-1"
                     /isolation_source="week A6 calf 146 isolate 1"
                     /host="bovine"
                     /db_xref="taxon:75985"
                     /geo_loc_name="USA: Georgia"
                     /collection_date="2016-04-27"
                     /collected_by="Emily R. Snyder"
WGS         VAIH01000001-VAIH01000161
WGS_SCAFLD  NZ_VAIH01000001-NZ_VAIH01000161
//
LOCUS       NZ_VAHT01000000      2525923 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mannheimia haemolytica strain UGA-A4-85-1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VAHT00000000
VERSION     NZ_VAHT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10847981
            Assembly: GCF_007003825.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2525923)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Genetic characterization of susceptible and multi-drug resistant
            Mannheimia haemolytica isolated from high-risk stocker calves prior
            to and after antimicrobial metaphylaxis
  JOURNAL   Vet Microbiol 235, 110-117 (2019)
   PUBMED   31282368
REFERENCE   2  (bases 1 to 2525923)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) POPH, Food Animal Health and Mangement
            Program, University of Georgia, 2200 College Station Road, Athens,
            GA 30602, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAHT00000000.1.
            The Mannheimia haemolytica whole genome shotgun (WGS) project has
            the project accession NZ_VAHT00000000.  This version of the project
            (01) has the accession number NZ_VAHT01000000, and consists of
            sequences VAHT01000001-VAHT01000178.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-JUN-2017
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 295x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007003825.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:09:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,601
            CDSs (total)                      :: 2,545
            Genes (coding)                    :: 2,454
            CDSs (with protein)               :: 2,454
            Genes (RNA)                       :: 56
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 91
            CDSs (without protein)            :: 91
            Pseudo Genes (ambiguous residues) :: 0 of 91
            Pseudo Genes (frameshifted)       :: 34 of 91
            Pseudo Genes (incomplete)         :: 52 of 91
            Pseudo Genes (internal stop)      :: 14 of 91
            Pseudo Genes (multiple problems)  :: 8 of 91
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2525923
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /strain="UGA-A4-85-1"
                     /isolation_source="week A4 calf 85 isolate 1"
                     /host="bovine"
                     /db_xref="taxon:75985"
                     /geo_loc_name="USA: Georgia"
                     /collection_date="2016-04-13"
                     /collected_by="Emily R. Snyder"
WGS         VAHT01000001-VAHT01000178
WGS_SCAFLD  NZ_VAHT01000001-NZ_VAHT01000178
//
LOCUS       NZ_JBPXXX010000000   2914600 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL88, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXXX000000000
VERSION     NZ_JBPXXX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087029
            Assembly: GCF_051845695.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2914600)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 2914600)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXXX000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXXX000000000.  This version of the
            project (01) has the accession number NZ_JBPXXX010000000, and
            consists of sequences JBPXXX010000001-JBPXXX010000014.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845695.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:19:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,958
            CDSs (total)                      :: 2,891
            Genes (coding)                    :: 2,868
            CDSs (with protein)               :: 2,868
            Genes (RNA)                       :: 67
            rRNAs                             :: 5, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 2 (5S, 16S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 23
            CDSs (without protein)            :: 23
            Pseudo Genes (ambiguous residues) :: 0 of 23
            Pseudo Genes (frameshifted)       :: 11 of 23
            Pseudo Genes (incomplete)         :: 9 of 23
            Pseudo Genes (internal stop)      :: 5 of 23
            Pseudo Genes (multiple problems)  :: 2 of 23
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2914600
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL88"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXXX010000001-JBPXXX010000014
WGS_SCAFLD  NZ_JBPXXX010000001-NZ_JBPXXX010000014
//
LOCUS       NZ_JBIXBG010000000   5804743 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1164, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXBG000000000
VERSION     NZ_JBIXBG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247321
            Assembly: GCF_045619545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5804743)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXBG000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXBG000000000.  This version of the
            project (01) has the accession number NZ_JBIXBG010000000, and
            consists of sequences JBIXBG010000001-JBIXBG010000010.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 330x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045619545.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:21:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,756
            CDSs (total)                      :: 5,626
            Genes (coding)                    :: 5,409
            CDSs (with protein)               :: 5,409
            Genes (RNA)                       :: 130
            rRNAs                             :: 9, 9, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 9 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 15
            Pseudo Genes (total)              :: 217
            CDSs (without protein)            :: 217
            Pseudo Genes (ambiguous residues) :: 0 of 217
            Pseudo Genes (frameshifted)       :: 114 of 217
            Pseudo Genes (incomplete)         :: 110 of 217
            Pseudo Genes (internal stop)      :: 24 of 217
            Pseudo Genes (multiple problems)  :: 28 of 217
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5804743
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1164"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXBG010000001-JBIXBG010000010
WGS_SCAFLD  NZ_JBIXBG010000001-NZ_JBIXBG010000010
//
LOCUS       NZ_JBPXYJ010000000   2980743 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL82, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXYJ000000000
VERSION     NZ_JBPXYJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087041
            Assembly: GCF_051845455.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2980743)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 2980743)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXYJ000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXYJ000000000.  This version of the
            project (01) has the accession number NZ_JBPXYJ010000000, and
            consists of sequences JBPXYJ010000001-JBPXYJ010000014.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845455.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:20:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,995
            CDSs (total)                      :: 2,930
            Genes (coding)                    :: 2,906
            CDSs (with protein)               :: 2,906
            Genes (RNA)                       :: 65
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 12 of 24
            Pseudo Genes (incomplete)         :: 14 of 24
            Pseudo Genes (internal stop)      :: 5 of 24
            Pseudo Genes (multiple problems)  :: 7 of 24
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2980743
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL82"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXYJ010000001-JBPXYJ010000014
WGS_SCAFLD  NZ_JBPXYJ010000001-NZ_JBPXYJ010000014
//
LOCUS       NZ_JBPXXY010000000   2920709 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL83, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXXY000000000
VERSION     NZ_JBPXXY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087030
            Assembly: GCF_051845675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2920709)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 2920709)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXXY000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXXY000000000.  This version of the
            project (01) has the accession number NZ_JBPXXY010000000, and
            consists of sequences JBPXXY010000001-JBPXXY010000010.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845675.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:18:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,971
            CDSs (total)                      :: 2,906
            Genes (coding)                    :: 2,883
            CDSs (with protein)               :: 2,883
            Genes (RNA)                       :: 65
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 23
            CDSs (without protein)            :: 23
            Pseudo Genes (ambiguous residues) :: 0 of 23
            Pseudo Genes (frameshifted)       :: 10 of 23
            Pseudo Genes (incomplete)         :: 10 of 23
            Pseudo Genes (internal stop)      :: 6 of 23
            Pseudo Genes (multiple problems)  :: 3 of 23
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2920709
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL83"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXXY010000001-JBPXXY010000010
WGS_SCAFLD  NZ_JBPXXY010000001-NZ_JBPXXY010000010
//
LOCUS       NZ_JBPXYP010000000   3063410 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL15, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXYP000000000
VERSION     NZ_JBPXYP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087047
            Assembly: GCF_051845335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 3063410)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 3063410)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXYP000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXYP000000000.  This version of the
            project (01) has the accession number NZ_JBPXYP010000000, and
            consists of sequences JBPXYP010000001-JBPXYP010000016.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845335.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:16:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,113
            CDSs (total)                      :: 3,048
            Genes (coding)                    :: 3,019
            CDSs (with protein)               :: 3,019
            Genes (RNA)                       :: 65
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 11 of 29
            Pseudo Genes (incomplete)         :: 17 of 29
            Pseudo Genes (internal stop)      :: 4 of 29
            Pseudo Genes (multiple problems)  :: 3 of 29
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3063410
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL15"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXYP010000001-JBPXYP010000016
WGS_SCAFLD  NZ_JBPXYP010000001-NZ_JBPXYP010000016
//
LOCUS       NZ_JBIXCJ010000000   5674689 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1131, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXCJ000000000
VERSION     NZ_JBIXCJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247292
            Assembly: GCF_045620145.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5674689)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXCJ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXCJ000000000.  This version of the
            project (01) has the accession number NZ_JBIXCJ010000000, and
            consists of sequences JBIXCJ010000001-JBIXCJ010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 307x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045620145.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:16:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,660
            CDSs (total)                      :: 5,535
            Genes (coding)                    :: 5,388
            CDSs (with protein)               :: 5,388
            Genes (RNA)                       :: 125
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 147
            CDSs (without protein)            :: 147
            Pseudo Genes (ambiguous residues) :: 0 of 147
            Pseudo Genes (frameshifted)       :: 79 of 147
            Pseudo Genes (incomplete)         :: 78 of 147
            Pseudo Genes (internal stop)      :: 22 of 147
            Pseudo Genes (multiple problems)  :: 27 of 147
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5674689
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1131"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXCJ010000001-JBIXCJ010000008
WGS_SCAFLD  NZ_JBIXCJ010000001-NZ_JBIXCJ010000008
//
LOCUS       NZ_JBPXXU010000000   2907414 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL84, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXXU000000000
VERSION     NZ_JBPXXU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087026
            Assembly: GCF_051845755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2907414)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 2907414)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXXU000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXXU000000000.  This version of the
            project (01) has the accession number NZ_JBPXXU010000000, and
            consists of sequences JBPXXU010000001-JBPXXU010000015.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845755.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:24:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,918
            CDSs (total)                      :: 2,853
            Genes (coding)                    :: 2,828
            CDSs (with protein)               :: 2,828
            Genes (RNA)                       :: 65
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 25
            CDSs (without protein)            :: 25
            Pseudo Genes (ambiguous residues) :: 0 of 25
            Pseudo Genes (frameshifted)       :: 9 of 25
            Pseudo Genes (incomplete)         :: 12 of 25
            Pseudo Genes (internal stop)      :: 8 of 25
            Pseudo Genes (multiple problems)  :: 4 of 25
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2907414
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL84"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXXU010000001-JBPXXU010000015
WGS_SCAFLD  NZ_JBPXXU010000001-NZ_JBPXXU010000015
//
LOCUS       NZ_JBPXYQ010000000   3065799 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL98, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXYQ000000000
VERSION     NZ_JBPXYQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087048
            Assembly: GCF_051845315.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 3065799)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 3065799)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXYQ000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXYQ000000000.  This version of the
            project (01) has the accession number NZ_JBPXYQ010000000, and
            consists of sequences JBPXYQ010000001-JBPXYQ010000015.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845315.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:22:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,160
            CDSs (total)                      :: 3,093
            Genes (coding)                    :: 3,064
            CDSs (with protein)               :: 3,064
            Genes (RNA)                       :: 67
            rRNAs                             :: 5, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 2 (5S, 16S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 11 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 4 of 29
            Pseudo Genes (multiple problems)  :: 2 of 29
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3065799
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL98"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXYQ010000001-JBPXYQ010000015
WGS_SCAFLD  NZ_JBPXYQ010000001-NZ_JBPXYQ010000015
//
LOCUS       NZ_JBPXYB010000000   2924399 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL71, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXYB000000000
VERSION     NZ_JBPXYB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087033
            Assembly: GCF_051845615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2924399)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 2924399)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXYB000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXYB000000000.  This version of the
            project (01) has the accession number NZ_JBPXYB010000000, and
            consists of sequences JBPXYB010000001-JBPXYB010000011.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845615.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:22:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,980
            CDSs (total)                      :: 2,915
            Genes (coding)                    :: 2,891
            CDSs (with protein)               :: 2,891
            Genes (RNA)                       :: 65
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 11 of 24
            Pseudo Genes (incomplete)         :: 8 of 24
            Pseudo Genes (internal stop)      :: 8 of 24
            Pseudo Genes (multiple problems)  :: 3 of 24
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2924399
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL71"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXYB010000001-JBPXYB010000011
WGS_SCAFLD  NZ_JBPXYB010000001-NZ_JBPXYB010000011
//
LOCUS       NZ_JBIXDY010000000   5967551 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1086, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXDY000000000
VERSION     NZ_JBIXDY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247251
            Assembly: GCF_045620965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5967551)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXDY000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXDY000000000.  This version of the
            project (01) has the accession number NZ_JBIXDY010000000, and
            consists of sequences JBIXDY010000001-JBIXDY010000014.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 242x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045620965.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:27:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,884
            CDSs (total)                      :: 5,763
            Genes (coding)                    :: 5,470
            CDSs (with protein)               :: 5,470
            Genes (RNA)                       :: 121
            rRNAs                             :: 9, 9, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 8 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 293
            CDSs (without protein)            :: 293
            Pseudo Genes (ambiguous residues) :: 0 of 293
            Pseudo Genes (frameshifted)       :: 178 of 293
            Pseudo Genes (incomplete)         :: 119 of 293
            Pseudo Genes (internal stop)      :: 24 of 293
            Pseudo Genes (multiple problems)  :: 24 of 293
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5967551
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1086"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXDY010000001-JBIXDY010000014
WGS_SCAFLD  NZ_JBIXDY010000001-NZ_JBIXDY010000014
//
LOCUS       NZ_JBPXXR010000000   2890442 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXXR000000000
VERSION     NZ_JBPXXR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087023
            Assembly: GCF_051845815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2890442)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 2890442)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXXR000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXXR000000000.  This version of the
            project (01) has the accession number NZ_JBPXXR010000000, and
            consists of sequences JBPXXR010000001-JBPXXR010000011.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845815.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:24:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,930
            CDSs (total)                      :: 2,865
            Genes (coding)                    :: 2,843
            CDSs (with protein)               :: 2,843
            Genes (RNA)                       :: 65
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 9 of 22
            Pseudo Genes (incomplete)         :: 9 of 22
            Pseudo Genes (internal stop)      :: 7 of 22
            Pseudo Genes (multiple problems)  :: 3 of 22
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2890442
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL12"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXXR010000001-JBPXXR010000011
WGS_SCAFLD  NZ_JBPXXR010000001-NZ_JBPXXR010000011
//
LOCUS       NZ_JBFNEC010000000   2779170 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Kocuria rhizophila strain 155, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBFNEC000000000
VERSION     NZ_JBFNEC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN42447477
            Assembly: GCF_041021375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kocuria rhizophila
  ORGANISM  Kocuria rhizophila
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Kocuria.
REFERENCE   1  (bases 1 to 2779170)
  AUTHORS   Pleshko,E.M. and Zhurina,M.V.
  TITLE     Kocuria Species Antibiotic Resistance Genes
  JOURNAL   Microbiology (N Y) 93 (S1), S126-S130 (2024)
  REMARK    DOI: 10.1134/S0026261724609722
REFERENCE   2  (bases 1 to 2779170)
  AUTHORS   Pleshko,E.M. and Zhurina,M.V.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2024) Faculty of Bioengineering and
            Bioinformatics, Moscow State University, Proisvodstvennaya, Moscow
            119619, Russia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBFNEC000000000.1.
            The Kocuria rhizophila whole genome shotgun (WGS) project has the
            project accession NZ_JBFNEC000000000.  This version of the project
            (01) has the accession number NZ_JBFNEC010000000, and consists of
            sequences JBFNEC010000001-JBFNEC010000027.
            Bacteria and source DNA available from The Federal Research Centre
            'Fundamentals of Biotechnology'.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 830.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_041021375.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:42:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,469
            CDSs (total)                      :: 2,417
            Genes (coding)                    :: 2,383
            CDSs (with protein)               :: 2,383
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 12 of 34
            Pseudo Genes (incomplete)         :: 27 of 34
            Pseudo Genes (internal stop)      :: 5 of 34
            Pseudo Genes (multiple problems)  :: 9 of 34
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2779170
                     /organism="Kocuria rhizophila"
                     /mol_type="genomic DNA"
                     /strain="155"
                     /db_xref="taxon:72000"
                     /geo_loc_name="Russia: Moscow region"
                     /collection_date="2021-03"
WGS         JBFNEC010000001-JBFNEC010000027
WGS_SCAFLD  NZ_JBFNEC010000001-NZ_JBFNEC010000027
//
LOCUS       NZ_JBPXYC010000000   2924767 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL67, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXYC000000000
VERSION     NZ_JBPXYC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087034
            Assembly: GCF_051845595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2924767)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 2924767)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXYC000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXYC000000000.  This version of the
            project (01) has the accession number NZ_JBPXYC010000000, and
            consists of sequences JBPXYC010000001-JBPXYC010000016.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845595.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:20:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,947
            CDSs (total)                      :: 2,880
            Genes (coding)                    :: 2,838
            CDSs (with protein)               :: 2,838
            Genes (RNA)                       :: 67
            rRNAs                             :: 4, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 1 (5S, 16S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 22 of 42
            Pseudo Genes (incomplete)         :: 21 of 42
            Pseudo Genes (internal stop)      :: 6 of 42
            Pseudo Genes (multiple problems)  :: 6 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2924767
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL67"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXYC010000001-JBPXYC010000016
WGS_SCAFLD  NZ_JBPXYC010000001-NZ_JBPXYC010000016
//
LOCUS       NZ_JBPXYN010000000   3025851 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL91, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXYN000000000
VERSION     NZ_JBPXYN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087045
            Assembly: GCF_051845375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 3025851)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 3025851)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXYN000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXYN000000000.  This version of the
            project (01) has the accession number NZ_JBPXYN010000000, and
            consists of sequences JBPXYN010000001-JBPXYN010000013.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845375.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:21:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,098
            CDSs (total)                      :: 3,033
            Genes (coding)                    :: 3,009
            CDSs (with protein)               :: 3,009
            Genes (RNA)                       :: 65
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 11 of 24
            Pseudo Genes (incomplete)         :: 10 of 24
            Pseudo Genes (internal stop)      :: 8 of 24
            Pseudo Genes (multiple problems)  :: 4 of 24
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3025851
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL91"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXYN010000001-JBPXYN010000013
WGS_SCAFLD  NZ_JBPXYN010000001-NZ_JBPXYN010000013
//
LOCUS       NZ_JBPXYI010000000   2980352 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL73, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXYI000000000
VERSION     NZ_JBPXYI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087040
            Assembly: GCF_051845475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2980352)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 2980352)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXYI000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXYI000000000.  This version of the
            project (01) has the accession number NZ_JBPXYI010000000, and
            consists of sequences JBPXYI010000001-JBPXYI010000014.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845475.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:22:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,996
            CDSs (total)                      :: 2,931
            Genes (coding)                    :: 2,908
            CDSs (with protein)               :: 2,908
            Genes (RNA)                       :: 65
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 23
            CDSs (without protein)            :: 23
            Pseudo Genes (ambiguous residues) :: 0 of 23
            Pseudo Genes (frameshifted)       :: 12 of 23
            Pseudo Genes (incomplete)         :: 14 of 23
            Pseudo Genes (internal stop)      :: 4 of 23
            Pseudo Genes (multiple problems)  :: 7 of 23
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2980352
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL73"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXYI010000001-JBPXYI010000014
WGS_SCAFLD  NZ_JBPXYI010000001-NZ_JBPXYI010000014
//
LOCUS       NZ_JBIWYP010000000   6019991 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1247, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIWYP000000000
VERSION     NZ_JBIWYP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247390
            Assembly: GCF_045618165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 6019991)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIWYP000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIWYP000000000.  This version of the
            project (01) has the accession number NZ_JBIWYP010000000, and
            consists of sequences JBIWYP010000001-JBIWYP010000010.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 320x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045618165.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:19:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,988
            CDSs (total)                      :: 5,862
            Genes (coding)                    :: 5,536
            CDSs (with protein)               :: 5,536
            Genes (RNA)                       :: 126
            rRNAs                             :: 9, 9, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 8 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 326
            CDSs (without protein)            :: 326
            Pseudo Genes (ambiguous residues) :: 0 of 326
            Pseudo Genes (frameshifted)       :: 220 of 326
            Pseudo Genes (incomplete)         :: 122 of 326
            Pseudo Genes (internal stop)      :: 29 of 326
            Pseudo Genes (multiple problems)  :: 41 of 326
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6019991
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1247"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIWYP010000001-JBIWYP010000010
WGS_SCAFLD  NZ_JBIWYP010000001-NZ_JBIWYP010000010
//
LOCUS       NZ_JBPXXZ010000000   2921348 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL18, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXXZ000000000
VERSION     NZ_JBPXXZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087031
            Assembly: GCF_051845655.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2921348)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 2921348)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXXZ000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXXZ000000000.  This version of the
            project (01) has the accession number NZ_JBPXXZ010000000, and
            consists of sequences JBPXXZ010000001-JBPXXZ010000016.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845655.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:22:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,955
            CDSs (total)                      :: 2,887
            Genes (coding)                    :: 2,854
            CDSs (with protein)               :: 2,854
            Genes (RNA)                       :: 68
            rRNAs                             :: 5, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 1 (5S, 16S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 33
            CDSs (without protein)            :: 33
            Pseudo Genes (ambiguous residues) :: 0 of 33
            Pseudo Genes (frameshifted)       :: 16 of 33
            Pseudo Genes (incomplete)         :: 16 of 33
            Pseudo Genes (internal stop)      :: 6 of 33
            Pseudo Genes (multiple problems)  :: 5 of 33
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2921348
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL18"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXXZ010000001-JBPXXZ010000016
WGS_SCAFLD  NZ_JBPXXZ010000001-NZ_JBPXXZ010000016
//
LOCUS       NZ_JBIWZZ010000000   5881140 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1204, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIWZZ000000000
VERSION     NZ_JBIWZZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247354
            Assembly: GCF_045618845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5881140)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIWZZ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIWZZ000000000.  This version of the
            project (01) has the accession number NZ_JBIWZZ010000000, and
            consists of sequences JBIWZZ010000001-JBIWZZ010000014.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 292x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045618845.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:13:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,766
            CDSs (total)                      :: 5,649
            Genes (coding)                    :: 5,352
            CDSs (with protein)               :: 5,352
            Genes (RNA)                       :: 117
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 297
            CDSs (without protein)            :: 297
            Pseudo Genes (ambiguous residues) :: 0 of 297
            Pseudo Genes (frameshifted)       :: 199 of 297
            Pseudo Genes (incomplete)         :: 110 of 297
            Pseudo Genes (internal stop)      :: 27 of 297
            Pseudo Genes (multiple problems)  :: 34 of 297
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5881140
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1204"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIWZZ010000001-JBIWZZ010000014
WGS_SCAFLD  NZ_JBIWZZ010000001-NZ_JBIWZZ010000014
//
LOCUS       NZ_JBPXXT010000000   2906858 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL74, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXXT000000000
VERSION     NZ_JBPXXT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087025
            Assembly: GCF_051845775.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2906858)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 2906858)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXXT000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXXT000000000.  This version of the
            project (01) has the accession number NZ_JBPXXT010000000, and
            consists of sequences JBPXXT010000001-JBPXXT010000015.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845775.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:19:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,920
            CDSs (total)                      :: 2,855
            Genes (coding)                    :: 2,830
            CDSs (with protein)               :: 2,830
            Genes (RNA)                       :: 65
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 25
            CDSs (without protein)            :: 25
            Pseudo Genes (ambiguous residues) :: 0 of 25
            Pseudo Genes (frameshifted)       :: 9 of 25
            Pseudo Genes (incomplete)         :: 12 of 25
            Pseudo Genes (internal stop)      :: 8 of 25
            Pseudo Genes (multiple problems)  :: 4 of 25
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2906858
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL74"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXXT010000001-JBPXXT010000015
WGS_SCAFLD  NZ_JBPXXT010000001-NZ_JBPXXT010000015
//
LOCUS       NZ_JBPXYK010000000   2995578 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL40, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXYK000000000
VERSION     NZ_JBPXYK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087042
            Assembly: GCF_051845435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2995578)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 2995578)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXYK000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXYK000000000.  This version of the
            project (01) has the accession number NZ_JBPXYK010000000, and
            consists of sequences JBPXYK010000001-JBPXYK010000011.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845435.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:23:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,996
            CDSs (total)                      :: 2,931
            Genes (coding)                    :: 2,908
            CDSs (with protein)               :: 2,908
            Genes (RNA)                       :: 65
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 23
            CDSs (without protein)            :: 23
            Pseudo Genes (ambiguous residues) :: 0 of 23
            Pseudo Genes (frameshifted)       :: 11 of 23
            Pseudo Genes (incomplete)         :: 11 of 23
            Pseudo Genes (internal stop)      :: 4 of 23
            Pseudo Genes (multiple problems)  :: 3 of 23
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2995578
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL40"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXYK010000001-JBPXYK010000011
WGS_SCAFLD  NZ_JBPXYK010000001-NZ_JBPXYK010000011
//
LOCUS       NZ_JBIXBB010000000   5847598 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1171, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXBB000000000
VERSION     NZ_JBIXBB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247326
            Assembly: GCF_045619425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5847598)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXBB000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXBB000000000.  This version of the
            project (01) has the accession number NZ_JBIXBB010000000, and
            consists of sequences JBIXBB010000001-JBIXBB010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 154x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045619425.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:12:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,799
            CDSs (total)                      :: 5,678
            Genes (coding)                    :: 5,419
            CDSs (with protein)               :: 5,419
            Genes (RNA)                       :: 121
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 259
            CDSs (without protein)            :: 259
            Pseudo Genes (ambiguous residues) :: 0 of 259
            Pseudo Genes (frameshifted)       :: 160 of 259
            Pseudo Genes (incomplete)         :: 115 of 259
            Pseudo Genes (internal stop)      :: 43 of 259
            Pseudo Genes (multiple problems)  :: 52 of 259
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5847598
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1171"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXBB010000001-JBIXBB010000009
WGS_SCAFLD  NZ_JBIXBB010000001-NZ_JBIXBB010000009
//
LOCUS       NZ_JBIXBJ010000000   5780470 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1160, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXBJ000000000
VERSION     NZ_JBIXBJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247318
            Assembly: GCF_045619565.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5780470)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXBJ000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXBJ000000000.  This version of the
            project (01) has the accession number NZ_JBIXBJ010000000, and
            consists of sequences JBIXBJ010000001-JBIXBJ010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 289x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045619565.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:13:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,698
            CDSs (total)                      :: 5,574
            Genes (coding)                    :: 5,378
            CDSs (with protein)               :: 5,378
            Genes (RNA)                       :: 124
            rRNAs                             :: 9, 9, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 196
            CDSs (without protein)            :: 196
            Pseudo Genes (ambiguous residues) :: 0 of 196
            Pseudo Genes (frameshifted)       :: 100 of 196
            Pseudo Genes (incomplete)         :: 100 of 196
            Pseudo Genes (internal stop)      :: 22 of 196
            Pseudo Genes (multiple problems)  :: 23 of 196
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5780470
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1160"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXBJ010000001-JBIXBJ010000007
WGS_SCAFLD  NZ_JBIXBJ010000001-NZ_JBIXBJ010000007
//
LOCUS       NZ_JBPXXV010000000   2907671 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL56, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXXV000000000
VERSION     NZ_JBPXXV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087027
            Assembly: GCF_051845735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2907671)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 2907671)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXXV000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXXV000000000.  This version of the
            project (01) has the accession number NZ_JBPXXV010000000, and
            consists of sequences JBPXXV010000001-JBPXXV010000012.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845735.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:19:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,946
            CDSs (total)                      :: 2,881
            Genes (coding)                    :: 2,858
            CDSs (with protein)               :: 2,858
            Genes (RNA)                       :: 65
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 23
            CDSs (without protein)            :: 23
            Pseudo Genes (ambiguous residues) :: 0 of 23
            Pseudo Genes (frameshifted)       :: 10 of 23
            Pseudo Genes (incomplete)         :: 12 of 23
            Pseudo Genes (internal stop)      :: 4 of 23
            Pseudo Genes (multiple problems)  :: 3 of 23
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2907671
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL56"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXXV010000001-JBPXXV010000012
WGS_SCAFLD  NZ_JBPXXV010000001-NZ_JBPXXV010000012
//
LOCUS       NZ_JAASRO010000000   8596726 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Kribbella shirazensis strain DSM 45490, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAASRO000000000
VERSION     NZ_JAASRO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05878102
            Assembly: GCF_011761605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kribbella shirazensis
  ORGANISM  Kribbella shirazensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Kribbellaceae; Kribbella.
REFERENCE   1  (bases 1 to 8596726)
  AUTHORS   Klenk,H.-P.
  TITLE     Sequencing the genomes of 1000 actinobacteria strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8596726)
  AUTHORS   Klenk,H.-P., Huntemann,M., Clum,A., Spunde,A., Palaniappan,K.,
            Ritter,S., Mikhailova,N., Chen,I.-M., Stamatis,D., Reddy,T.,
            O'Malley,R., Daum,C., Shapiro,N., Ivanova,N., Kyrpides,N. and
            Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-MAR-2020) Prokaryote Super Program, DOE Joint Genome
            Institute, 1 Cyclotron Road, Mail Stop: 91R0183, Berkeley, CA
            94720, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAASRO000000000.1.
            The Kribbella shirazensis whole genome shotgun (WGS) project has
            the project accession NZ_JAASRO000000000.  This version of the
            project (01) has the accession number NZ_JAASRO010000000, and
            consists of sequence JAASRO010000001.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: HGAP v. smrtlink/6.0.0.47835, HGAP 4
                                      (0.2.1)
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 229.0x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_011761605.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:57:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 8,225
            CDSs (total)                      :: 8,156
            Genes (coding)                    :: 8,117
            CDSs (with protein)               :: 8,117
            Genes (RNA)                       :: 69
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 5 of 39
            Pseudo Genes (incomplete)         :: 33 of 39
            Pseudo Genes (internal stop)      :: 1 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8596726
                     /organism="Kribbella shirazensis"
                     /mol_type="genomic DNA"
                     /strain="DSM 45490"
                     /culture_collection="DSM:45490"
                     /type_material="type strain of Kribbella shirazensis"
                     /db_xref="taxon:1105143"
WGS         JAASRO010000001
WGS_SCAFLD  NZ_JAASRO010000001
//
LOCUS       NZ_JBPXXQ010000000   2887310 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL46, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXXQ000000000
VERSION     NZ_JBPXXQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087022
            Assembly: GCF_051845835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2887310)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 2887310)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXXQ000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXXQ000000000.  This version of the
            project (01) has the accession number NZ_JBPXXQ010000000, and
            consists of sequences JBPXXQ010000001-JBPXXQ010000014.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845835.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:27:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,882
            CDSs (total)                      :: 2,813
            Genes (coding)                    :: 2,785
            CDSs (with protein)               :: 2,785
            Genes (RNA)                       :: 69
            rRNAs                             :: 5, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 10 of 28
            Pseudo Genes (incomplete)         :: 14 of 28
            Pseudo Genes (internal stop)      :: 9 of 28
            Pseudo Genes (multiple problems)  :: 5 of 28
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2887310
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL46"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXXQ010000001-JBPXXQ010000014
WGS_SCAFLD  NZ_JBPXXQ010000001-NZ_JBPXXQ010000014
//
LOCUS       NZ_JBPXXI010000000   2878042 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL52, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXXI000000000
VERSION     NZ_JBPXXI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087014
            Assembly: GCF_051845975.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2878042)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 2878042)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXXI000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXXI000000000.  This version of the
            project (01) has the accession number NZ_JBPXXI010000000, and
            consists of sequences JBPXXI010000001-JBPXXI010000011.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845975.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:21:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,906
            CDSs (total)                      :: 2,841
            Genes (coding)                    :: 2,817
            CDSs (with protein)               :: 2,817
            Genes (RNA)                       :: 65
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 11 of 24
            Pseudo Genes (incomplete)         :: 9 of 24
            Pseudo Genes (internal stop)      :: 5 of 24
            Pseudo Genes (multiple problems)  :: 1 of 24
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2878042
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL52"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXXI010000001-JBPXXI010000011
WGS_SCAFLD  NZ_JBPXXI010000001-NZ_JBPXXI010000011
//
LOCUS       NZ_JBIXBN010000000   5951042 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1156, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXBN000000000
VERSION     NZ_JBIXBN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247314
            Assembly: GCF_045619725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5951042)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXBN000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXBN000000000.  This version of the
            project (01) has the accession number NZ_JBIXBN010000000, and
            consists of sequences JBIXBN010000001-JBIXBN010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 202x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045619725.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:17:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,960
            CDSs (total)                      :: 5,836
            Genes (coding)                    :: 5,598
            CDSs (with protein)               :: 5,598
            Genes (RNA)                       :: 124
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 239
            CDSs (without protein)            :: 238
            Pseudo Genes (ambiguous residues) :: 0 of 239
            Pseudo Genes (frameshifted)       :: 138 of 239
            Pseudo Genes (incomplete)         :: 106 of 239
            Pseudo Genes (internal stop)      :: 25 of 239
            Pseudo Genes (multiple problems)  :: 29 of 239
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5951042
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1156"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXBN010000001-JBIXBN010000009
WGS_SCAFLD  NZ_JBIXBN010000001-NZ_JBIXBN010000009
//
LOCUS       NZ_JBPXXN010000000   2882666 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL60, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXXN000000000
VERSION     NZ_JBPXXN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087019
            Assembly: GCF_051845895.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2882666)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 2882666)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXXN000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXXN000000000.  This version of the
            project (01) has the accession number NZ_JBPXXN010000000, and
            consists of sequences JBPXXN010000001-JBPXXN010000016.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845895.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:27:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,870
            CDSs (total)                      :: 2,805
            Genes (coding)                    :: 2,781
            CDSs (with protein)               :: 2,781
            Genes (RNA)                       :: 65
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 7 of 24
            Pseudo Genes (incomplete)         :: 13 of 24
            Pseudo Genes (internal stop)      :: 7 of 24
            Pseudo Genes (multiple problems)  :: 3 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2882666
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL60"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXXN010000001-JBPXXN010000016
WGS_SCAFLD  NZ_JBPXXN010000001-NZ_JBPXXN010000016
//
LOCUS       NZ_JBIGSD010000000   6081574 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E85, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGSD000000000
VERSION     NZ_JBIGSD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130442
            Assembly: GCF_045575055.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 6081574)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGSD000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGSD000000000.  This version of the
            project (01) has the accession number NZ_JBIGSD010000000, and
            consists of sequences JBIGSD010000001-JBIGSD010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 306x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575055.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:59:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,054
            CDSs (total)                      :: 5,929
            Genes (coding)                    :: 5,641
            CDSs (with protein)               :: 5,641
            Genes (RNA)                       :: 125
            rRNAs                             :: 9, 9, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 288
            CDSs (without protein)            :: 288
            Pseudo Genes (ambiguous residues) :: 0 of 288
            Pseudo Genes (frameshifted)       :: 176 of 288
            Pseudo Genes (incomplete)         :: 134 of 288
            Pseudo Genes (internal stop)      :: 23 of 288
            Pseudo Genes (multiple problems)  :: 41 of 288
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6081574
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E85"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGSD010000001-JBIGSD010000009
WGS_SCAFLD  NZ_JBIGSD010000001-NZ_JBIGSD010000009
//
LOCUS       NZ_JBIXDH010000000   5787157 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1105, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXDH000000000
VERSION     NZ_JBIXDH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247268
            Assembly: GCF_045620685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5787157)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXDH000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXDH000000000.  This version of the
            project (01) has the accession number NZ_JBIXDH010000000, and
            consists of sequences JBIXDH010000001-JBIXDH010000016.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 464x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045620685.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:31:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,854
            CDSs (total)                      :: 5,729
            Genes (coding)                    :: 5,404
            CDSs (with protein)               :: 5,404
            Genes (RNA)                       :: 125
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 325
            CDSs (without protein)            :: 325
            Pseudo Genes (ambiguous residues) :: 0 of 325
            Pseudo Genes (frameshifted)       :: 180 of 325
            Pseudo Genes (incomplete)         :: 161 of 325
            Pseudo Genes (internal stop)      :: 26 of 325
            Pseudo Genes (multiple problems)  :: 38 of 325
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5787157
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1105"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXDH010000001-JBIXDH010000016
WGS_SCAFLD  NZ_JBIXDH010000001-NZ_JBIXDH010000016
//
LOCUS       NZ_JBIXDN010000000   5723564 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1099, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXDN000000000
VERSION     NZ_JBIXDN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247262
            Assembly: GCF_045620745.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5723564)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXDN000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXDN000000000.  This version of the
            project (01) has the accession number NZ_JBIXDN010000000, and
            consists of sequences JBIXDN010000001-JBIXDN010000003.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 359x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045620745.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:28:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,599
            CDSs (total)                      :: 5,475
            Genes (coding)                    :: 5,313
            CDSs (with protein)               :: 5,313
            Genes (RNA)                       :: 124
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 162
            CDSs (without protein)            :: 162
            Pseudo Genes (ambiguous residues) :: 0 of 162
            Pseudo Genes (frameshifted)       :: 83 of 162
            Pseudo Genes (incomplete)         :: 84 of 162
            Pseudo Genes (internal stop)      :: 30 of 162
            Pseudo Genes (multiple problems)  :: 32 of 162
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5723564
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1099"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXDN010000001-JBIXDN010000003
WGS_SCAFLD  NZ_JBIXDN010000001-NZ_JBIXDN010000003
//
LOCUS       NZ_JBIXEH010000000   5898097 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1075, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXEH000000000
VERSION     NZ_JBIXEH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247242
            Assembly: GCF_045621165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5898097)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXEH000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXEH000000000.  This version of the
            project (01) has the accession number NZ_JBIXEH010000000, and
            consists of sequences JBIXEH010000001-JBIXEH010000010.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 306x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045621165.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:26:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,865
            CDSs (total)                      :: 5,741
            Genes (coding)                    :: 5,497
            CDSs (with protein)               :: 5,497
            Genes (RNA)                       :: 124
            rRNAs                             :: 9, 9, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 244
            CDSs (without protein)            :: 244
            Pseudo Genes (ambiguous residues) :: 0 of 244
            Pseudo Genes (frameshifted)       :: 154 of 244
            Pseudo Genes (incomplete)         :: 94 of 244
            Pseudo Genes (internal stop)      :: 34 of 244
            Pseudo Genes (multiple problems)  :: 33 of 244
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5898097
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1075"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXEH010000001-JBIXEH010000010
WGS_SCAFLD  NZ_JBIXEH010000001-NZ_JBIXEH010000010
//
LOCUS       NZ_JBIGTY010000000   5698012 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E4, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGTY000000000
VERSION     NZ_JBIGTY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130373
            Assembly: GCF_045575945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5698012)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGTY000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGTY000000000.  This version of the
            project (01) has the accession number NZ_JBIGTY010000000, and
            consists of sequences JBIGTY010000001-JBIGTY010000010.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 340x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575945.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:45:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,722
            CDSs (total)                      :: 5,597
            Genes (coding)                    :: 5,411
            CDSs (with protein)               :: 5,411
            Genes (RNA)                       :: 125
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 110 of 186
            Pseudo Genes (incomplete)         :: 77 of 186
            Pseudo Genes (internal stop)      :: 19 of 186
            Pseudo Genes (multiple problems)  :: 19 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5698012
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E4"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGTY010000001-JBIGTY010000010
WGS_SCAFLD  NZ_JBIGTY010000001-NZ_JBIGTY010000010
//
LOCUS       NZ_JBIXFR010000000   5388679 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1034, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXFR000000000
VERSION     NZ_JBIXFR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247206
            Assembly: GCF_045621825.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5388679)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXFR000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXFR000000000.  This version of the
            project (01) has the accession number NZ_JBIXFR010000000, and
            consists of sequences JBIXFR010000001-JBIXFR010000003.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 193x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045621825.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:24:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,279
            CDSs (total)                      :: 5,155
            Genes (coding)                    :: 5,048
            CDSs (with protein)               :: 5,048
            Genes (RNA)                       :: 124
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 107
            CDSs (without protein)            :: 107
            Pseudo Genes (ambiguous residues) :: 0 of 107
            Pseudo Genes (frameshifted)       :: 59 of 107
            Pseudo Genes (incomplete)         :: 53 of 107
            Pseudo Genes (internal stop)      :: 15 of 107
            Pseudo Genes (multiple problems)  :: 17 of 107
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5388679
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1034"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXFR010000001-JBIXFR010000003
WGS_SCAFLD  NZ_JBIXFR010000001-NZ_JBIXFR010000003
//
LOCUS       NZ_JBIWZH010000000   5565014 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1224, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIWZH000000000
VERSION     NZ_JBIWZH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247372
            Assembly: GCF_045618525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5565014)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIWZH000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIWZH000000000.  This version of the
            project (01) has the accession number NZ_JBIWZH010000000, and
            consists of sequences JBIWZH010000001-JBIWZH010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 164x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045618525.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:31:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,482
            CDSs (total)                      :: 5,357
            Genes (coding)                    :: 5,218
            CDSs (with protein)               :: 5,218
            Genes (RNA)                       :: 125
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 139
            CDSs (without protein)            :: 139
            Pseudo Genes (ambiguous residues) :: 0 of 139
            Pseudo Genes (frameshifted)       :: 78 of 139
            Pseudo Genes (incomplete)         :: 69 of 139
            Pseudo Genes (internal stop)      :: 20 of 139
            Pseudo Genes (multiple problems)  :: 23 of 139
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5565014
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1224"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIWZH010000001-JBIWZH010000005
WGS_SCAFLD  NZ_JBIWZH010000001-NZ_JBIWZH010000005
//
LOCUS       NZ_JBIXBA010000000   5794236 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1172, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXBA000000000
VERSION     NZ_JBIXBA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247327
            Assembly: GCF_045619445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5794236)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXBA000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXBA000000000.  This version of the
            project (01) has the accession number NZ_JBIXBA010000000, and
            consists of sequences JBIXBA010000001-JBIXBA010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 329x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045619445.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:25:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,723
            CDSs (total)                      :: 5,602
            Genes (coding)                    :: 5,376
            CDSs (with protein)               :: 5,376
            Genes (RNA)                       :: 121
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 226
            CDSs (without protein)            :: 226
            Pseudo Genes (ambiguous residues) :: 0 of 226
            Pseudo Genes (frameshifted)       :: 139 of 226
            Pseudo Genes (incomplete)         :: 110 of 226
            Pseudo Genes (internal stop)      :: 26 of 226
            Pseudo Genes (multiple problems)  :: 44 of 226
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5794236
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1172"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXBA010000001-JBIXBA010000009
WGS_SCAFLD  NZ_JBIXBA010000001-NZ_JBIXBA010000009
//
LOCUS       NZ_JBJMAT010000000   5766502 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain KP2740, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJMAT000000000
VERSION     NZ_JBJMAT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45088017
            Assembly: GCF_045799195.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5766502)
  AUTHORS   Ruan,X.
  TITLE     Aztreonam acts as a synergist for ceftazidime/avibactam against
            Carbapenem-resistant Enterobacteriaceae (CRE) of various
            carbapenemase phenotypes in Southwestern China
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5766502)
  AUTHORS   Ruan,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-NOV-2024) Department of Clinical Laboratory, The
            First Affiliated Hospital of Guangxi Medical University, Shuangyong
            Road 6, Nanning, Guangxi 530021, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJMAT000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBJMAT000000000.  This version of the
            project (01) has the accession number NZ_JBJMAT010000000, and
            consists of sequences JBJMAT010000001-JBJMAT010000203.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10.0x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045799195.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:34:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,962
            CDSs (total)                      :: 5,833
            Genes (coding)                    :: 5,601
            CDSs (with protein)               :: 5,601
            Genes (RNA)                       :: 129
            rRNAs                             :: 15, 3, 15 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1 (5S, 16S)
            partial rRNAs                     :: 8, 2, 15 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 232
            CDSs (without protein)            :: 232
            Pseudo Genes (ambiguous residues) :: 0 of 232
            Pseudo Genes (frameshifted)       :: 60 of 232
            Pseudo Genes (incomplete)         :: 177 of 232
            Pseudo Genes (internal stop)      :: 23 of 232
            Pseudo Genes (multiple problems)  :: 25 of 232
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5766502
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="KP2740"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="China: nanning"
                     /collection_date="2022-02-07"
WGS         JBJMAT010000001-JBJMAT010000203
WGS_SCAFLD  NZ_JBJMAT010000001-NZ_JBJMAT010000203
//
LOCUS       NZ_JBIXBX010000000   5916954 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1143, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXBX000000000
VERSION     NZ_JBIXBX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247304
            Assembly: GCF_045619925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5916954)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXBX000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXBX000000000.  This version of the
            project (01) has the accession number NZ_JBIXBX010000000, and
            consists of sequences JBIXBX010000001-JBIXBX010000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 406x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045619925.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:21:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,945
            CDSs (total)                      :: 5,821
            Genes (coding)                    :: 5,641
            CDSs (with protein)               :: 5,641
            Genes (RNA)                       :: 124
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 180
            CDSs (without protein)            :: 180
            Pseudo Genes (ambiguous residues) :: 0 of 180
            Pseudo Genes (frameshifted)       :: 90 of 180
            Pseudo Genes (incomplete)         :: 93 of 180
            Pseudo Genes (internal stop)      :: 19 of 180
            Pseudo Genes (multiple problems)  :: 20 of 180
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5916954
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1143"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXBX010000001-JBIXBX010000008
WGS_SCAFLD  NZ_JBIXBX010000001-NZ_JBIXBX010000008
//
LOCUS       NZ_JBPXYG010000000   2943794 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL63, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXYG000000000
VERSION     NZ_JBPXYG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087038
            Assembly: GCF_051845515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2943794)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 2943794)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXYG000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXYG000000000.  This version of the
            project (01) has the accession number NZ_JBPXYG010000000, and
            consists of sequences JBPXYG010000001-JBPXYG010000010.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845515.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:25:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,948
            CDSs (total)                      :: 2,883
            Genes (coding)                    :: 2,862
            CDSs (with protein)               :: 2,862
            Genes (RNA)                       :: 65
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 8 of 21
            Pseudo Genes (internal stop)      :: 7 of 21
            Pseudo Genes (multiple problems)  :: 2 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2943794
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL63"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXYG010000001-JBPXYG010000010
WGS_SCAFLD  NZ_JBPXYG010000001-NZ_JBPXYG010000010
//
LOCUS       NZ_JBWBWD010000000   2475901 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Lactococcus lactis strain LMT-2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWBWD000000000
VERSION     NZ_JBWBWD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56502196
            Assembly: GCF_056175425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lactococcus lactis
  ORGANISM  Lactococcus lactis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Lactococcus.
REFERENCE   1  (bases 1 to 2475901)
  AUTHORS   Dejtisakdi,W., Kingkaew,E. and Khanrin,L.
  TITLE     Chlorella sp. Biomass Promotes Probiotic metabolism
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2475901)
  AUTHORS   Dejtisakdi,W., Kingkaew,E. and Khanrin,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAR-2026) School of Science, Department of Biology,
            King Mongkuts Institute of Technology Ladkrabang (KMITL), Chalong
            Krung, Bangkok, Bangkok 10250, Thailand
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBWD000000000.1.
            The Lactococcus lactis whole genome shotgun (WGS) project has the
            project accession NZ_JBWBWD000000000.  This version of the project
            (01) has the accession number NZ_JBWBWD010000000, and consists of
            sequences JBWBWD010000001-JBWBWD010000106.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 16-FEB-2026
            Assembly Method        :: Unicylcer v. Galaxy Version 0.5.1+galaxy0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 120.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056175425.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:31:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,468
            CDSs (total)                      :: 2,412
            Genes (coding)                    :: 2,366
            CDSs (with protein)               :: 2,366
            Genes (RNA)                       :: 56
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 10 of 46
            Pseudo Genes (incomplete)         :: 36 of 46
            Pseudo Genes (internal stop)      :: 4 of 46
            Pseudo Genes (multiple problems)  :: 4 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2475901
                     /organism="Lactococcus lactis"
                     /mol_type="genomic DNA"
                     /strain="LMT-2"
                     /host="Perna viridis"
                     /db_xref="taxon:1358"
                     /geo_loc_name="Thailand: Bangkok"
                     /collection_date="2024-01-07"
WGS         JBWBWD010000001-JBWBWD010000106
WGS_SCAFLD  NZ_JBWBWD010000001-NZ_JBWBWD010000106
//
LOCUS       NZ_JBIXDS010000000   5718045 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E1094, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIXDS000000000
VERSION     NZ_JBIXDS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44247257
            Assembly: GCF_045620905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5718045)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIXDS000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIXDS000000000.  This version of the
            project (01) has the accession number NZ_JBIXDS010000000, and
            consists of sequences JBIXDS010000001-JBIXDS010000003.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 323x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045620905.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:29:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,595
            CDSs (total)                      :: 5,471
            Genes (coding)                    :: 5,312
            CDSs (with protein)               :: 5,312
            Genes (RNA)                       :: 124
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 159
            CDSs (without protein)            :: 159
            Pseudo Genes (ambiguous residues) :: 0 of 159
            Pseudo Genes (frameshifted)       :: 81 of 159
            Pseudo Genes (incomplete)         :: 88 of 159
            Pseudo Genes (internal stop)      :: 30 of 159
            Pseudo Genes (multiple problems)  :: 37 of 159
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5718045
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E1094"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIXDS010000001-JBIXDS010000003
WGS_SCAFLD  NZ_JBIXDS010000001-NZ_JBIXDS010000003
//
LOCUS       NZ_JBPXXG010000000   2869219 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DS3-1-Lm, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXXG000000000
VERSION     NZ_JBPXXG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087012
            Assembly: GCF_051846015.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2869219)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 2869219)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXXG000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXXG000000000.  This version of the
            project (01) has the accession number NZ_JBPXXG010000000, and
            consists of sequences JBPXXG010000001-JBPXXG010000008.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051846015.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:27:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,886
            CDSs (total)                      :: 2,821
            Genes (coding)                    :: 2,803
            CDSs (with protein)               :: 2,803
            Genes (RNA)                       :: 65
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 18
            CDSs (without protein)            :: 18
            Pseudo Genes (ambiguous residues) :: 0 of 18
            Pseudo Genes (frameshifted)       :: 9 of 18
            Pseudo Genes (incomplete)         :: 7 of 18
            Pseudo Genes (internal stop)      :: 5 of 18
            Pseudo Genes (multiple problems)  :: 3 of 18
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2869219
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DS3-1-Lm"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXXG010000001-JBPXXG010000008
WGS_SCAFLD  NZ_JBPXXG010000001-NZ_JBPXXG010000008
//
LOCUS       NZ_JBIGMY010000000   5613885 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E311, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGMY000000000
VERSION     NZ_JBIGMY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130639
            Assembly: GCF_045572255.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5613885)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGMY000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGMY000000000.  This version of the
            project (01) has the accession number NZ_JBIGMY010000000, and
            consists of sequences JBIGMY010000001-JBIGMY010000012.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 655x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045572255.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:54:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,532
            CDSs (total)                      :: 5,407
            Genes (coding)                    :: 5,211
            CDSs (with protein)               :: 5,211
            Genes (RNA)                       :: 125
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 196
            CDSs (without protein)            :: 196
            Pseudo Genes (ambiguous residues) :: 0 of 196
            Pseudo Genes (frameshifted)       :: 98 of 196
            Pseudo Genes (incomplete)         :: 101 of 196
            Pseudo Genes (internal stop)      :: 25 of 196
            Pseudo Genes (multiple problems)  :: 25 of 196
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5613885
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E311"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGMY010000001-JBIGMY010000012
WGS_SCAFLD  NZ_JBIGMY010000001-NZ_JBIGMY010000012
//
LOCUS       NZ_JBPXYR010000000   3193579 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBPXYR000000000
VERSION     NZ_JBPXYR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087049
            Assembly: GCF_051845295.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 3193579)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 3193579)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXYR000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXYR000000000.  This version of the
            project (01) has the accession number NZ_JBPXYR010000000, and
            consists of sequences JBPXYR010000001-JBPXYR010000017.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845295.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:18:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,301
            CDSs (total)                      :: 3,236
            Genes (coding)                    :: 3,201
            CDSs (with protein)               :: 3,201
            Genes (RNA)                       :: 65
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 12 of 35
            Pseudo Genes (incomplete)         :: 21 of 35
            Pseudo Genes (internal stop)      :: 5 of 35
            Pseudo Genes (multiple problems)  :: 3 of 35
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3193579
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL2"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXYR010000001-JBPXYR010000017
WGS_SCAFLD  NZ_JBPXYR010000001-NZ_JBPXYR010000017
//
LOCUS       NZ_JBIGND010000000   6032235 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E306, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGND000000000
VERSION     NZ_JBIGND000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130634
            Assembly: GCF_045572335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 6032235)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGND000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGND000000000.  This version of the
            project (01) has the accession number NZ_JBIGND010000000, and
            consists of sequences JBIGND010000001-JBIGND010000011.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 288x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045572335.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:50:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,017
            CDSs (total)                      :: 5,893
            Genes (coding)                    :: 5,563
            CDSs (with protein)               :: 5,563
            Genes (RNA)                       :: 124
            rRNAs                             :: 9, 9, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 86
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 330
            CDSs (without protein)            :: 330
            Pseudo Genes (ambiguous residues) :: 0 of 330
            Pseudo Genes (frameshifted)       :: 222 of 330
            Pseudo Genes (incomplete)         :: 135 of 330
            Pseudo Genes (internal stop)      :: 30 of 330
            Pseudo Genes (multiple problems)  :: 54 of 330
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6032235
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E306"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGND010000001-JBIGND010000011
WGS_SCAFLD  NZ_JBIGND010000001-NZ_JBIGND010000011
//
LOCUS       NZ_JBPXXS010000000   2906734 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL79, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXXS000000000
VERSION     NZ_JBPXXS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087024
            Assembly: GCF_051845795.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2906734)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 2906734)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXXS000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXXS000000000.  This version of the
            project (01) has the accession number NZ_JBPXXS010000000, and
            consists of sequences JBPXXS010000001-JBPXXS010000017.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845795.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:14:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,921
            CDSs (total)                      :: 2,856
            Genes (coding)                    :: 2,830
            CDSs (with protein)               :: 2,830
            Genes (RNA)                       :: 65
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 9 of 26
            Pseudo Genes (incomplete)         :: 13 of 26
            Pseudo Genes (internal stop)      :: 8 of 26
            Pseudo Genes (multiple problems)  :: 4 of 26
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2906734
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL79"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXXS010000001-JBPXXS010000017
WGS_SCAFLD  NZ_JBPXXS010000001-NZ_JBPXXS010000017
//
LOCUS       NZ_JBIGOB010000000   5589721 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E267, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGOB000000000
VERSION     NZ_JBIGOB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130600
            Assembly: GCF_045572835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5589721)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGOB000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGOB000000000.  This version of the
            project (01) has the accession number NZ_JBIGOB010000000, and
            consists of sequences JBIGOB010000001-JBIGOB010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 390x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045572835.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:43:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,540
            CDSs (total)                      :: 5,412
            Genes (coding)                    :: 5,212
            CDSs (with protein)               :: 5,212
            Genes (RNA)                       :: 128
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 17
            Pseudo Genes (total)              :: 200
            CDSs (without protein)            :: 200
            Pseudo Genes (ambiguous residues) :: 0 of 200
            Pseudo Genes (frameshifted)       :: 106 of 200
            Pseudo Genes (incomplete)         :: 92 of 200
            Pseudo Genes (internal stop)      :: 27 of 200
            Pseudo Genes (multiple problems)  :: 22 of 200
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5589721
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E267"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGOB010000001-JBIGOB010000005
WGS_SCAFLD  NZ_JBIGOB010000001-NZ_JBIGOB010000005
//
LOCUS       NZ_JBPXYO010000000   3062229 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL94, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXYO000000000
VERSION     NZ_JBPXYO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087046
            Assembly: GCF_051845355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 3062229)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 3062229)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXYO000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXYO000000000.  This version of the
            project (01) has the accession number NZ_JBPXYO010000000, and
            consists of sequences JBPXYO010000001-JBPXYO010000016.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845355.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:20:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,125
            CDSs (total)                      :: 3,060
            Genes (coding)                    :: 3,022
            CDSs (with protein)               :: 3,022
            Genes (RNA)                       :: 65
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 38
            CDSs (without protein)            :: 38
            Pseudo Genes (ambiguous residues) :: 0 of 38
            Pseudo Genes (frameshifted)       :: 14 of 38
            Pseudo Genes (incomplete)         :: 22 of 38
            Pseudo Genes (internal stop)      :: 7 of 38
            Pseudo Genes (multiple problems)  :: 5 of 38
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3062229
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL94"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXYO010000001-JBPXYO010000016
WGS_SCAFLD  NZ_JBPXYO010000001-NZ_JBPXYO010000016
//
LOCUS       NZ_JBIGPC010000000   5750208 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E220, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGPC000000000
VERSION     NZ_JBIGPC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130559
            Assembly: GCF_045573425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5750208)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGPC000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGPC000000000.  This version of the
            project (01) has the accession number NZ_JBIGPC010000000, and
            consists of sequences JBIGPC010000001-JBIGPC010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 186x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045573425.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:59:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,604
            CDSs (total)                      :: 5,484
            Genes (coding)                    :: 5,262
            CDSs (with protein)               :: 5,262
            Genes (RNA)                       :: 120
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 222
            CDSs (without protein)            :: 222
            Pseudo Genes (ambiguous residues) :: 0 of 222
            Pseudo Genes (frameshifted)       :: 134 of 222
            Pseudo Genes (incomplete)         :: 95 of 222
            Pseudo Genes (internal stop)      :: 20 of 222
            Pseudo Genes (multiple problems)  :: 22 of 222
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5750208
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E220"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGPC010000001-JBIGPC010000006
WGS_SCAFLD  NZ_JBIGPC010000001-NZ_JBIGPC010000006
//
LOCUS       NZ_JBIGQI010000000   5710126 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E159, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGQI000000000
VERSION     NZ_JBIGQI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130508
            Assembly: GCF_045574045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5710126)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGQI000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGQI000000000.  This version of the
            project (01) has the accession number NZ_JBIGQI010000000, and
            consists of sequences JBIGQI010000001-JBIGQI010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 307x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045574045.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:42:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,615
            CDSs (total)                      :: 5,490
            Genes (coding)                    :: 5,334
            CDSs (with protein)               :: 5,334
            Genes (RNA)                       :: 125
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 156
            CDSs (without protein)            :: 156
            Pseudo Genes (ambiguous residues) :: 0 of 156
            Pseudo Genes (frameshifted)       :: 76 of 156
            Pseudo Genes (incomplete)         :: 79 of 156
            Pseudo Genes (internal stop)      :: 24 of 156
            Pseudo Genes (multiple problems)  :: 18 of 156
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5710126
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E159"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGQI010000001-JBIGQI010000009
WGS_SCAFLD  NZ_JBIGQI010000001-NZ_JBIGQI010000009
//
LOCUS       NZ_JBPXYD010000000   2927569 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL64, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXYD000000000
VERSION     NZ_JBPXYD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087035
            Assembly: GCF_051845575.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2927569)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 2927569)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXYD000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXYD000000000.  This version of the
            project (01) has the accession number NZ_JBPXYD010000000, and
            consists of sequences JBPXYD010000001-JBPXYD010000019.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845575.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:19:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,939
            CDSs (total)                      :: 2,872
            Genes (coding)                    :: 2,843
            CDSs (with protein)               :: 2,843
            Genes (RNA)                       :: 67
            rRNAs                             :: 4, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 1 (5S, 16S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 12 of 29
            Pseudo Genes (incomplete)         :: 13 of 29
            Pseudo Genes (internal stop)      :: 8 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2927569
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL64"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXYD010000001-JBPXYD010000019
WGS_SCAFLD  NZ_JBPXYD010000001-NZ_JBPXYD010000019
//
LOCUS       NZ_CDVBQS010000000   4231016 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Leeuwenhoekiella nanhaiensis isolate MarMAG_112170, whole
            genome shotgun sequencing project.
ACCESSION   NZ_CDVBQS000000000
VERSION     NZ_CDVBQS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120735716
            Assembly: GCF_977644445.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Leeuwenhoekiella nanhaiensis (subsurface metagenome)
  ORGANISM  Leeuwenhoekiella nanhaiensis
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Leeuwenhoekiella.
REFERENCE   1  (bases 1 to 4231016)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVBQS000000000.1.
            The Leeuwenhoekiella nanhaiensis whole genome shotgun (WGS) project
            has the project accession NZ_CDVBQS000000000.  This version of the
            project (01) has the accession number NZ_CDVBQS010000000, and
            consists of sequences CDVBQS010000001-CDVBQS010000207.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977644445.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 01:33:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,705
            CDSs (total)                      :: 3,670
            Genes (coding)                    :: 3,623
            CDSs (with protein)               :: 3,623
            Genes (RNA)                       :: 35
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 47
            CDSs (without protein)            :: 47
            Pseudo Genes (ambiguous residues) :: 0 of 47
            Pseudo Genes (frameshifted)       :: 8 of 47
            Pseudo Genes (incomplete)         :: 36 of 47
            Pseudo Genes (internal stop)      :: 4 of 47
            Pseudo Genes (multiple problems)  :: 1 of 47
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4231016
                     /organism="Leeuwenhoekiella nanhaiensis"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_112170"
                     /db_xref="taxon:1655491"
                     /environmental_sample
                     /geo_loc_name="Atlantic Ocean"
                     /collection_date="2014-04-10"
                     /metagenome_source="subsurface metagenome"
                     /metagenomic
WGS         CDVBQS010000001-CDVBQS010000207
WGS_SCAFLD  NZ_CDVBQS010000001-NZ_CDVBQS010000207
//
LOCUS       NZ_JBPXXM010000000   2880881 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL7, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBPXXM000000000
VERSION     NZ_JBPXXM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087018
            Assembly: GCF_051845915.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2880881)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 2880881)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXXM000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXXM000000000.  This version of the
            project (01) has the accession number NZ_JBPXXM010000000, and
            consists of sequences JBPXXM010000001-JBPXXM010000010.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845915.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:28:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,908
            CDSs (total)                      :: 2,843
            Genes (coding)                    :: 2,820
            CDSs (with protein)               :: 2,820
            Genes (RNA)                       :: 65
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 23
            CDSs (without protein)            :: 23
            Pseudo Genes (ambiguous residues) :: 0 of 23
            Pseudo Genes (frameshifted)       :: 11 of 23
            Pseudo Genes (incomplete)         :: 9 of 23
            Pseudo Genes (internal stop)      :: 6 of 23
            Pseudo Genes (multiple problems)  :: 3 of 23
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2880881
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL7"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXXM010000001-JBPXXM010000010
WGS_SCAFLD  NZ_JBPXXM010000001-NZ_JBPXXM010000010
//
LOCUS       NZ_JBIGRA010000000   5845075 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E136, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGRA000000000
VERSION     NZ_JBIGRA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130486
            Assembly: GCF_045574385.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5845075)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGRA000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGRA000000000.  This version of the
            project (01) has the accession number NZ_JBIGRA010000000, and
            consists of sequences JBIGRA010000001-JBIGRA010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 162x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045574385.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:38:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,848
            CDSs (total)                      :: 5,731
            Genes (coding)                    :: 5,558
            CDSs (with protein)               :: 5,558
            Genes (RNA)                       :: 117
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 173
            CDSs (without protein)            :: 173
            Pseudo Genes (ambiguous residues) :: 0 of 173
            Pseudo Genes (frameshifted)       :: 81 of 173
            Pseudo Genes (incomplete)         :: 92 of 173
            Pseudo Genes (internal stop)      :: 21 of 173
            Pseudo Genes (multiple problems)  :: 17 of 173
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5845075
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E136"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGRA010000001-JBIGRA010000005
WGS_SCAFLD  NZ_JBIGRA010000001-NZ_JBIGRA010000005
//
LOCUS       NZ_JBPXYA010000000   2922458 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DS5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBPXYA000000000
VERSION     NZ_JBPXYA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087032
            Assembly: GCF_051845635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2922458)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 2922458)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXYA000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXYA000000000.  This version of the
            project (01) has the accession number NZ_JBPXYA010000000, and
            consists of sequences JBPXYA010000001-JBPXYA010000017.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845635.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:23:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,957
            CDSs (total)                      :: 2,889
            Genes (coding)                    :: 2,856
            CDSs (with protein)               :: 2,856
            Genes (RNA)                       :: 68
            rRNAs                             :: 5, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 1 (5S, 16S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 33
            CDSs (without protein)            :: 33
            Pseudo Genes (ambiguous residues) :: 0 of 33
            Pseudo Genes (frameshifted)       :: 16 of 33
            Pseudo Genes (incomplete)         :: 16 of 33
            Pseudo Genes (internal stop)      :: 6 of 33
            Pseudo Genes (multiple problems)  :: 5 of 33
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2922458
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DS5"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXYA010000001-JBPXYA010000017
WGS_SCAFLD  NZ_JBPXYA010000001-NZ_JBPXYA010000017
//
LOCUS       NZ_JBPXXL010000000   2880571 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL90, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXXL000000000
VERSION     NZ_JBPXXL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087017
            Assembly: GCF_051845935.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2880571)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 2880571)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXXL000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXXL000000000.  This version of the
            project (01) has the accession number NZ_JBPXXL010000000, and
            consists of sequences JBPXXL010000001-JBPXXL010000016.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845935.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:26:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,883
            CDSs (total)                      :: 2,815
            Genes (coding)                    :: 2,784
            CDSs (with protein)               :: 2,784
            Genes (RNA)                       :: 68
            rRNAs                             :: 5, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 1 (5S, 16S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 15 of 31
            Pseudo Genes (incomplete)         :: 16 of 31
            Pseudo Genes (internal stop)      :: 5 of 31
            Pseudo Genes (multiple problems)  :: 5 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2880571
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL90"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXXL010000001-JBPXXL010000016
WGS_SCAFLD  NZ_JBPXXL010000001-NZ_JBPXXL010000016
//
LOCUS       NZ_JBIGRS010000000   5515851 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E102, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGRS000000000
VERSION     NZ_JBIGRS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130456
            Assembly: GCF_045574845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5515851)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGRS000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGRS000000000.  This version of the
            project (01) has the accession number NZ_JBIGRS010000000, and
            consists of sequences JBIGRS010000001-JBIGRS010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 172x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045574845.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:58:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,461
            CDSs (total)                      :: 5,332
            Genes (coding)                    :: 5,147
            CDSs (with protein)               :: 5,147
            Genes (RNA)                       :: 129
            rRNAs                             :: 9, 9, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 9 (5S, 16S, 23S)
            tRNAs                             :: 91
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 185
            CDSs (without protein)            :: 185
            Pseudo Genes (ambiguous residues) :: 0 of 185
            Pseudo Genes (frameshifted)       :: 105 of 185
            Pseudo Genes (incomplete)         :: 90 of 185
            Pseudo Genes (internal stop)      :: 17 of 185
            Pseudo Genes (multiple problems)  :: 25 of 185
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5515851
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E102"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGRS010000001-JBIGRS010000006
WGS_SCAFLD  NZ_JBIGRS010000001-NZ_JBIGRS010000006
//
LOCUS       NZ_JBOBQB010000000   4058266 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Kocuria rosea strain 397, whole genome shotgun sequencing project.
ACCESSION   NZ_JBOBQB000000000
VERSION     NZ_JBOBQB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN48667755
            Assembly: GCF_050586365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kocuria rosea
  ORGANISM  Kocuria rosea
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Kocuria.
REFERENCE   1  (bases 1 to 4058266)
  AUTHORS   Zhurina,M.V., Pleshko,E.M., Mart'yanov,S.V., Ivanova,M.A. and
            Plakunov,V.K.
  TITLE     Non-Attached Biofilm Aggregates in Planktonic Cultures of Kocuria
            spp
  JOURNAL   Microbiology (N Y) 94 (S1), S16-S20 (2025)
  REMARK    DOI: 10.1134/S0026261725604245
REFERENCE   2  (bases 1 to 4058266)
  AUTHORS   Pleshko,E., Zhurina,M. and Logacheva,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-MAY-2025) Faculty of Bioengineering and
            Bioinformatics, Moscow State University, 1-73 Leninskie Gory,
            Moscow 119234, Russia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBOBQB000000000.1.
            The Kocuria rosea whole genome shotgun (WGS) project has the
            project accession NZ_JBOBQB000000000.  This version of the project
            (01) has the accession number NZ_JBOBQB010000000, and consists of
            sequences JBOBQB010000001-JBOBQB010000091.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 198.3x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_050586365.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:50:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,817
            CDSs (total)                      :: 3,764
            Genes (coding)                    :: 3,705
            CDSs (with protein)               :: 3,705
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 11 of 59
            Pseudo Genes (incomplete)         :: 48 of 59
            Pseudo Genes (internal stop)      :: 4 of 59
            Pseudo Genes (multiple problems)  :: 4 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4058266
                     /organism="Kocuria rosea"
                     /mol_type="genomic DNA"
                     /strain="397"
                     /isolation_source="Sod-podzolic soil"
                     /db_xref="taxon:1275"
                     /geo_loc_name="Russia: Mezhevskoe oil field, Perm region"
                     /collection_date="1988"
WGS         JBOBQB010000001-JBOBQB010000091
WGS_SCAFLD  NZ_JBOBQB010000001-NZ_JBOBQB010000091
//
LOCUS       NZ_JBIGSM010000000   5705185 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E74, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGSM000000000
VERSION     NZ_JBIGSM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130431
            Assembly: GCF_045575135.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5705185)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGSM000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGSM000000000.  This version of the
            project (01) has the accession number NZ_JBIGSM010000000, and
            consists of sequences JBIGSM010000001-JBIGSM010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 81x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575135.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:44:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,689
            CDSs (total)                      :: 5,566
            Genes (coding)                    :: 5,414
            CDSs (with protein)               :: 5,414
            Genes (RNA)                       :: 123
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 152
            CDSs (without protein)            :: 152
            Pseudo Genes (ambiguous residues) :: 0 of 152
            Pseudo Genes (frameshifted)       :: 92 of 152
            Pseudo Genes (incomplete)         :: 69 of 152
            Pseudo Genes (internal stop)      :: 18 of 152
            Pseudo Genes (multiple problems)  :: 25 of 152
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5705185
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E74"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGSM010000001-JBIGSM010000007
WGS_SCAFLD  NZ_JBIGSM010000001-NZ_JBIGSM010000007
//
LOCUS       NZ_JBIGTW010000000   5781072 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E7, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGTW000000000
VERSION     NZ_JBIGTW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130375
            Assembly: GCF_045575935.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5781072)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGTW000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGTW000000000.  This version of the
            project (01) has the accession number NZ_JBIGTW010000000, and
            consists of sequences JBIGTW010000001-JBIGTW010000130.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 487x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575935.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:45:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,865
            CDSs (total)                      :: 5,743
            Genes (coding)                    :: 5,459
            CDSs (with protein)               :: 5,459
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 9, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 83
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 284
            CDSs (without protein)            :: 284
            Pseudo Genes (ambiguous residues) :: 0 of 284
            Pseudo Genes (frameshifted)       :: 182 of 284
            Pseudo Genes (incomplete)         :: 120 of 284
            Pseudo Genes (internal stop)      :: 17 of 284
            Pseudo Genes (multiple problems)  :: 33 of 284
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5781072
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E7"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGTW010000001-JBIGTW010000130
WGS_SCAFLD  NZ_JBIGTW010000001-NZ_JBIGTW010000130
//
LOCUS       NZ_VKCH01000000      2398788 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Ligilactobacillus murinus strain 3V1P2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VKCH00000000
VERSION     NZ_VKCH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11618721
            Assembly: GCF_010581125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ligilactobacillus murinus
  ORGANISM  Ligilactobacillus murinus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Ligilactobacillus.
REFERENCE   1  (bases 1 to 2398788)
  AUTHORS   Singer,J.R., Blosser,E.G., Zindl,C.L., Silberger,D.J., Conlan,S.,
            Laufer,V.A., DiToro,D., Deming,C., Kumar,R., Morrow,C.D.,
            Segre,J.A., Gray,M.J., Randolph,D.A. and Weaver,C.T.
  TITLE     Preventing dysbiosis of the neonatal mouse intestinal microbiome
            protects against late-onset sepsis
  JOURNAL   Nat Med 25 (11), 1772-1782 (2019)
   PUBMED   31700190
REFERENCE   2  (bases 1 to 2398788)
  AUTHORS   Segre,J.A. and Mullikin,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-JUL-2019) NISC, NIH Sequencing Center, 5625 Fishers
            Lane, Rockville, MD 20852, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VKCH00000000.1.
            The Ligilactobacillus murinus whole genome shotgun (WGS) project
            has the project accession NZ_VKCH00000000.  This version of the
            project (01) has the accession number NZ_VKCH01000000, and consists
            of sequences VKCH01000001-VKCH01000196.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 86x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_010581125.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:26:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,450
            CDSs (total)                      :: 2,393
            Genes (coding)                    :: 2,324
            CDSs (with protein)               :: 2,324
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1, 3 (5S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 17 of 69
            Pseudo Genes (incomplete)         :: 52 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 6 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2398788
                     /organism="Ligilactobacillus murinus"
                     /mol_type="genomic DNA"
                     /strain="3V1P2"
                     /isolation_source="gut"
                     /host="Mus musculus"
                     /db_xref="taxon:1622"
                     /geo_loc_name="USA"
                     /lat_lon="33.5034 N 86.7994 W"
                     /collection_date="2018-12-21"
WGS         VKCH01000001-VKCH01000196
WGS_SCAFLD  NZ_VKCH01000001-NZ_VKCH01000196
//
LOCUS       NZ_JBIGTX010000000   5706502 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E6, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGTX000000000
VERSION     NZ_JBIGTX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130374
            Assembly: GCF_045575995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5706502)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGTX000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGTX000000000.  This version of the
            project (01) has the accession number NZ_JBIGTX010000000, and
            consists of sequences JBIGTX010000001-JBIGTX010000011.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 524x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575995.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:56:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,623
            CDSs (total)                      :: 5,498
            Genes (coding)                    :: 5,289
            CDSs (with protein)               :: 5,289
            Genes (RNA)                       :: 125
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 90
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 209
            CDSs (without protein)            :: 209
            Pseudo Genes (ambiguous residues) :: 0 of 209
            Pseudo Genes (frameshifted)       :: 136 of 209
            Pseudo Genes (incomplete)         :: 73 of 209
            Pseudo Genes (internal stop)      :: 27 of 209
            Pseudo Genes (multiple problems)  :: 21 of 209
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5706502
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E6"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGTX010000001-JBIGTX010000011
WGS_SCAFLD  NZ_JBIGTX010000001-NZ_JBIGTX010000011
//
LOCUS       NZ_JAXCXA010000000   4836622 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Leclercia sp. CFBP8987, whole genome shotgun sequencing project.
ACCESSION   NZ_JAXCXA000000000
VERSION     NZ_JAXCXA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN38288741
            Assembly: GCF_034044995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Leclercia sp. CFBP8987
  ORGANISM  Leclercia sp. CFBP8987
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Leclercia.
REFERENCE   1  (bases 1 to 4836622)
  AUTHORS   Arnault,G., Marais,C., Preveaux,A., Briand,M., Poisson,A.S.,
            Sarniguet,A., Barret,M. and Simonin,M.
  TITLE     Seedling microbiota engineering using bacterial synthetic community
            inoculation on seeds
  JOURNAL   FEMS Microbiol Ecol 100 (4) (2024)
   PUBMED   38503562
  REMARK    Erratum:[FEMS Microbiol Ecol. 2024 May 14;100(6):fiae065. doi:
            10.1093/femsec/fiae065. PMID: 38748655]
REFERENCE   2  (bases 1 to 4836622)
  AUTHORS   Arnault,G., Marais,C., Preveaux,A., Briand,M., Poisson,A.S.,
            Sarniguet,A., Barret,M. and Simonin,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2023) SPE, INRAE, rue Georges Morel, Beaucouze
            49071, France
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAXCXA000000000.1.
            The Leclercia sp. CFBP8987 whole genome shotgun (WGS) project has
            the project accession NZ_JAXCXA000000000.  This version of the
            project (01) has the accession number NZ_JAXCXA010000000, and
            consists of sequences JAXCXA010000001-JAXCXA010000022.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: JAN-2022
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 248.105918070464x
            Sequencing Technology  :: DNBseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_034044995.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:48:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,668
            CDSs (total)                      :: 4,576
            Genes (coding)                    :: 4,529
            CDSs (with protein)               :: 4,529
            Genes (RNA)                       :: 92
            rRNAs                             :: 6, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 77
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 47
            CDSs (without protein)            :: 47
            Pseudo Genes (ambiguous residues) :: 0 of 47
            Pseudo Genes (frameshifted)       :: 19 of 47
            Pseudo Genes (incomplete)         :: 28 of 47
            Pseudo Genes (internal stop)      :: 5 of 47
            Pseudo Genes (multiple problems)  :: 5 of 47
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4836622
                     /organism="Leclercia sp. CFBP8987"
                     /mol_type="genomic DNA"
                     /strain="CFBP8987"
                     /isolation_source="seedling"
                     /host="Phaseolus vulgaris"
                     /culture_collection="CIRM-CFBP:CFBP8987"
                     /db_xref="taxon:3096525"
                     /geo_loc_name="France: Condom, Gers"
                     /collection_date="2021-01"
                     /genotype="Vanilla"
WGS         JAXCXA010000001-JAXCXA010000022
WGS_SCAFLD  NZ_JAXCXA010000001-NZ_JAXCXA010000022
//
LOCUS       NZ_VKCB01000000      2314777 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Ligilactobacillus murinus strain SM2V2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VKCB00000000
VERSION     NZ_VKCB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11618727
            Assembly: GCF_010580985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ligilactobacillus murinus
  ORGANISM  Ligilactobacillus murinus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Ligilactobacillus.
REFERENCE   1  (bases 1 to 2314777)
  AUTHORS   Singer,J.R., Blosser,E.G., Zindl,C.L., Silberger,D.J., Conlan,S.,
            Laufer,V.A., DiToro,D., Deming,C., Kumar,R., Morrow,C.D.,
            Segre,J.A., Gray,M.J., Randolph,D.A. and Weaver,C.T.
  TITLE     Preventing dysbiosis of the neonatal mouse intestinal microbiome
            protects against late-onset sepsis
  JOURNAL   Nat Med 25 (11), 1772-1782 (2019)
   PUBMED   31700190
REFERENCE   2  (bases 1 to 2314777)
  AUTHORS   Segre,J.A. and Mullikin,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-JUL-2019) NISC, NIH Sequencing Center, 5625 Fishers
            Lane, Rockville, MD 20852, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VKCB00000000.1.
            The Ligilactobacillus murinus whole genome shotgun (WGS) project
            has the project accession NZ_VKCB00000000.  This version of the
            project (01) has the accession number NZ_VKCB01000000, and consists
            of sequences VKCB01000001-VKCB01000187.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 90x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_010580985.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:26:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,354
            CDSs (total)                      :: 2,302
            Genes (coding)                    :: 2,235
            CDSs (with protein)               :: 2,235
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 1, 2 (5S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 16 of 67
            Pseudo Genes (incomplete)         :: 50 of 67
            Pseudo Genes (internal stop)      :: 7 of 67
            Pseudo Genes (multiple problems)  :: 6 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2314777
                     /organism="Ligilactobacillus murinus"
                     /mol_type="genomic DNA"
                     /strain="SM2V2"
                     /isolation_source="gut"
                     /host="Mus musculus"
                     /db_xref="taxon:1622"
                     /geo_loc_name="USA"
                     /lat_lon="33.5034 N 86.7994 W"
                     /collection_date="2018-12-22"
WGS         VKCB01000001-VKCB01000187
WGS_SCAFLD  NZ_VKCB01000001-NZ_VKCB01000187
//
LOCUS       NZ_JBIGNH010000000   5554503 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E295, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGNH000000000
VERSION     NZ_JBIGNH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130625
            Assembly: GCF_045572455.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5554503)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGNH000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGNH000000000.  This version of the
            project (01) has the accession number NZ_JBIGNH010000000, and
            consists of sequences JBIGNH010000001-JBIGNH010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 297x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045572455.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:06:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,501
            CDSs (total)                      :: 5,377
            Genes (coding)                    :: 5,197
            CDSs (with protein)               :: 5,197
            Genes (RNA)                       :: 124
            rRNAs                             :: 9, 9, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 9, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 180
            CDSs (without protein)            :: 180
            Pseudo Genes (ambiguous residues) :: 0 of 180
            Pseudo Genes (frameshifted)       :: 90 of 180
            Pseudo Genes (incomplete)         :: 88 of 180
            Pseudo Genes (internal stop)      :: 29 of 180
            Pseudo Genes (multiple problems)  :: 23 of 180
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5554503
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E295"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGNH010000001-JBIGNH010000007
WGS_SCAFLD  NZ_JBIGNH010000001-NZ_JBIGNH010000007
//
LOCUS       NZ_JBIGPD010000000   5653350 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E219, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGPD000000000
VERSION     NZ_JBIGPD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130558
            Assembly: GCF_045573465.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5653350)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGPD000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGPD000000000.  This version of the
            project (01) has the accession number NZ_JBIGPD010000000, and
            consists of sequences JBIGPD010000001-JBIGPD010000007.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 440x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045573465.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:49:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,618
            CDSs (total)                      :: 5,499
            Genes (coding)                    :: 5,300
            CDSs (with protein)               :: 5,300
            Genes (RNA)                       :: 119
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 199
            CDSs (without protein)            :: 199
            Pseudo Genes (ambiguous residues) :: 0 of 199
            Pseudo Genes (frameshifted)       :: 131 of 199
            Pseudo Genes (incomplete)         :: 78 of 199
            Pseudo Genes (internal stop)      :: 23 of 199
            Pseudo Genes (multiple problems)  :: 28 of 199
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5653350
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E219"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGPD010000001-JBIGPD010000007
WGS_SCAFLD  NZ_JBIGPD010000001-NZ_JBIGPD010000007
//
LOCUS       NZ_JBPXYL010000000   3009154 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL22, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXYL000000000
VERSION     NZ_JBPXYL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087043
            Assembly: GCF_051845415.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 3009154)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 3009154)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXYL000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXYL000000000.  This version of the
            project (01) has the accession number NZ_JBPXYL010000000, and
            consists of sequences JBPXYL010000001-JBPXYL010000022.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845415.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:24:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,077
            CDSs (total)                      :: 3,012
            Genes (coding)                    :: 2,988
            CDSs (with protein)               :: 2,988
            Genes (RNA)                       :: 65
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 8 of 24
            Pseudo Genes (incomplete)         :: 12 of 24
            Pseudo Genes (internal stop)      :: 6 of 24
            Pseudo Genes (multiple problems)  :: 2 of 24
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3009154
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL22"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXYL010000001-JBPXYL010000022
WGS_SCAFLD  NZ_JBPXYL010000001-NZ_JBPXYL010000022
//
LOCUS       NZ_JBIGRD010000000   5704187 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E133, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGRD000000000
VERSION     NZ_JBIGRD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130483
            Assembly: GCF_045574485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5704187)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGRD000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGRD000000000.  This version of the
            project (01) has the accession number NZ_JBIGRD010000000, and
            consists of sequences JBIGRD010000001-JBIGRD010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 417x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045574485.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:45:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,620
            CDSs (total)                      :: 5,500
            Genes (coding)                    :: 5,259
            CDSs (with protein)               :: 5,259
            Genes (RNA)                       :: 120
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 241
            CDSs (without protein)            :: 241
            Pseudo Genes (ambiguous residues) :: 0 of 241
            Pseudo Genes (frameshifted)       :: 162 of 241
            Pseudo Genes (incomplete)         :: 82 of 241
            Pseudo Genes (internal stop)      :: 25 of 241
            Pseudo Genes (multiple problems)  :: 22 of 241
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5704187
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E133"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGRD010000001-JBIGRD010000009
WGS_SCAFLD  NZ_JBIGRD010000001-NZ_JBIGRD010000009
//
LOCUS       NZ_JBPXYM010000000   3009310 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL92, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXYM000000000
VERSION     NZ_JBPXYM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087044
            Assembly: GCF_051845395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 3009310)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 3009310)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXYM000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXYM000000000.  This version of the
            project (01) has the accession number NZ_JBPXYM010000000, and
            consists of sequences JBPXYM010000001-JBPXYM010000022.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845395.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:20:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,074
            CDSs (total)                      :: 3,009
            Genes (coding)                    :: 2,988
            CDSs (with protein)               :: 2,988
            Genes (RNA)                       :: 65
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 8 of 21
            Pseudo Genes (incomplete)         :: 10 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            Pseudo Genes (multiple problems)  :: 2 of 21
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3009310
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL92"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXYM010000001-JBPXYM010000022
WGS_SCAFLD  NZ_JBPXYM010000001-NZ_JBPXYM010000022
//
LOCUS       NZ_JBIGSV010000000   5758451 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Klebsiella pneumoniae strain CPE_E60, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBIGSV000000000
VERSION     NZ_JBIGSV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44130419
            Assembly: GCF_045575415.1
KEYWORDS    WGS; RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella
            pneumoniae complex.
REFERENCE   1  (bases 1 to 5758451)
  AUTHORS   Ng,O.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2024) Infectious Disease Research Laboratory,
            National Centre for Infectious Diseases, 16 Jalan Tan Tock Seng,
            Singapore 308442, Singapore
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBIGSV000000000.1.
            The Klebsiella pneumoniae whole genome shotgun (WGS) project has
            the project accession NZ_JBIGSV000000000.  This version of the
            project (01) has the accession number NZ_JBIGSV010000000, and
            consists of sequences JBIGSV010000001-JBIGSV010000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.48
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 403x
            Sequencing Technology  :: Oxford Nanopore GridION; Illumina Miseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045575415.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:52:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,756
            CDSs (total)                      :: 5,634
            Genes (coding)                    :: 5,466
            CDSs (with protein)               :: 5,466
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 168
            CDSs (without protein)            :: 168
            Pseudo Genes (ambiguous residues) :: 0 of 168
            Pseudo Genes (frameshifted)       :: 96 of 168
            Pseudo Genes (incomplete)         :: 74 of 168
            Pseudo Genes (internal stop)      :: 25 of 168
            Pseudo Genes (multiple problems)  :: 23 of 168
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5758451
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /strain="CPE_E60"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /geo_loc_name="Singapore"
WGS         JBIGSV010000001-JBIGSV010000009
WGS_SCAFLD  NZ_JBIGSV010000001-NZ_JBIGSV010000009
//
LOCUS       NZ_JBPXYE010000000   2930509 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL55, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXYE000000000
VERSION     NZ_JBPXYE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087036
            Assembly: GCF_051845555.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2930509)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 2930509)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXYE000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXYE000000000.  This version of the
            project (01) has the accession number NZ_JBPXYE010000000, and
            consists of sequences JBPXYE010000001-JBPXYE010000018.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845555.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:19:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,950
            CDSs (total)                      :: 2,882
            Genes (coding)                    :: 2,853
            CDSs (with protein)               :: 2,853
            Genes (RNA)                       :: 68
            rRNAs                             :: 5, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 1 (5S, 16S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 11 of 29
            Pseudo Genes (incomplete)         :: 13 of 29
            Pseudo Genes (internal stop)      :: 10 of 29
            Pseudo Genes (multiple problems)  :: 5 of 29
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2930509
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL55"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXYE010000001-JBPXYE010000018
WGS_SCAFLD  NZ_JBPXYE010000001-NZ_JBPXYE010000018
//
LOCUS       NZ_JBPXXO010000000   2884083 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL54, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXXO000000000
VERSION     NZ_JBPXXO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087020
            Assembly: GCF_051845875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2884083)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 2884083)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXXO000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXXO000000000.  This version of the
            project (01) has the accession number NZ_JBPXXO010000000, and
            consists of sequences JBPXXO010000001-JBPXXO010000017.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845875.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:20:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,870
            CDSs (total)                      :: 2,805
            Genes (coding)                    :: 2,779
            CDSs (with protein)               :: 2,779
            Genes (RNA)                       :: 65
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 10 of 26
            Pseudo Genes (incomplete)         :: 13 of 26
            Pseudo Genes (internal stop)      :: 7 of 26
            Pseudo Genes (multiple problems)  :: 4 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2884083
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL54"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXXO010000001-JBPXXO010000017
WGS_SCAFLD  NZ_JBPXXO010000001-NZ_JBPXXO010000017
//
LOCUS       NZ_VFMM01000000      7505702 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Kribbella jejuensis strain DSM 17305, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VFMM00000000
VERSION     NZ_VFMM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11512387
            Assembly: GCF_006715085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kribbella jejuensis
  ORGANISM  Kribbella jejuensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Kribbellaceae; Kribbella.
REFERENCE   1  (bases 1 to 7505702)
  AUTHORS   Klenk,H.-P.
  TITLE     Sequencing the genomes of 1000 actinobacteria strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7505702)
  AUTHORS   Klenk,H.-P., Huntemann,M., Clum,A., Pillay,M., Palaniappan,K.,
            Varghese,N., Mikhailova,N., Stamatis,D., Reddy,T., Daum,C.,
            Shapiro,N., Ivanova,N., Kyrpides,N. and Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-JUN-2019) Prokaryotic Super Group, DOE Joint Genome
            Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VFMM00000000.1.
            The Kribbella jejuensis whole genome shotgun (WGS) project has the
            project accession NZ_VFMM00000000.  This version of the project
            (01) has the accession number NZ_VFMM01000000, and consists of
            sequences VFMM01000001-VFMM01000004.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: HGAP v. smrtlink/6.0.0.47835, HGAP 4
                                      (0.2.1)
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 494.0x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_006715085.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:12:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,373
            CDSs (total)                      :: 7,308
            Genes (coding)                    :: 7,267
            CDSs (with protein)               :: 7,267
            Genes (RNA)                       :: 65
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 41
            CDSs (without protein)            :: 41
            Pseudo Genes (ambiguous residues) :: 0 of 41
            Pseudo Genes (frameshifted)       :: 6 of 41
            Pseudo Genes (incomplete)         :: 37 of 41
            Pseudo Genes (internal stop)      :: 0 of 41
            Pseudo Genes (multiple problems)  :: 2 of 41
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7505702
                     /organism="Kribbella jejuensis"
                     /mol_type="genomic DNA"
                     /strain="DSM 17305"
                     /culture_collection="DSM:17305"
                     /type_material="type strain of Kribbella jejuensis"
                     /db_xref="taxon:236068"
WGS         VFMM01000001-VFMM01000004
WGS_SCAFLD  NZ_VFMM01000001-NZ_VFMM01000004
//
LOCUS       NZ_JBPXYF010000000   2943643 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL44, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXYF000000000
VERSION     NZ_JBPXYF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087037
            Assembly: GCF_051845535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2943643)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 2943643)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXYF000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXYF000000000.  This version of the
            project (01) has the accession number NZ_JBPXYF010000000, and
            consists of sequences JBPXYF010000001-JBPXYF010000011.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845535.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:22:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,949
            CDSs (total)                      :: 2,884
            Genes (coding)                    :: 2,866
            CDSs (with protein)               :: 2,866
            Genes (RNA)                       :: 65
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 18
            CDSs (without protein)            :: 18
            Pseudo Genes (ambiguous residues) :: 0 of 18
            Pseudo Genes (frameshifted)       :: 6 of 18
            Pseudo Genes (incomplete)         :: 7 of 18
            Pseudo Genes (internal stop)      :: 7 of 18
            Pseudo Genes (multiple problems)  :: 2 of 18
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2943643
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL44"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXYF010000001-JBPXYF010000011
WGS_SCAFLD  NZ_JBPXYF010000001-NZ_JBPXYF010000011
//
LOCUS       NZ_JBPXXP010000000   2886823 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Listeria monocytogenes strain DSL41, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPXXP000000000
VERSION     NZ_JBPXXP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN50087021
            Assembly: GCF_051845855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae;
            Listeria.
REFERENCE   1  (bases 1 to 2886823)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Occurrence and Characteristics of Salmonella spp., L.
            monocytogenes, Y. enterocolitica, and Campylobacter spp. in Raw
            Meat-Based Diets for Pets
  JOURNAL   Pets (Basel) 2 (4), 35 (2025)
  REMARK    DOI: 10.3390/pets2040035
REFERENCE   2  (bases 1 to 2886823)
  AUTHORS   Schmid,D.T., Barmettler,K., Stevens,M.J.A. and Stephan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUL-2025) Institute for Food Safety and Hygiene,
            University of Zurich, Winterthurerstrasse 272, Zurich, Zurich 8057,
            Switzerland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPXXP000000000.1.
            The Listeria monocytogenes whole genome shotgun (WGS) project has
            the project accession NZ_JBPXXP000000000.  This version of the
            project (01) has the accession number NZ_JBPXXP010000000, and
            consists of sequences JBPXXP010000001-JBPXXP010000016.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051845855.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:20:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,877
            CDSs (total)                      :: 2,808
            Genes (coding)                    :: 2,782
            CDSs (with protein)               :: 2,782
            Genes (RNA)                       :: 69
            rRNAs                             :: 5, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 10 of 26
            Pseudo Genes (incomplete)         :: 15 of 26
            Pseudo Genes (internal stop)      :: 4 of 26
            Pseudo Genes (multiple problems)  :: 3 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2886823
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /strain="DSL41"
                     /isolation_source="Raw meat"
                     /db_xref="taxon:1639"
                     /geo_loc_name="Switzerland: Zurich"
                     /lat_lon="47.4 N 8.55 E"
                     /collection_date="2025"
                     /collected_by="ILS"
WGS         JBPXXP010000001-JBPXXP010000016
WGS_SCAFLD  NZ_JBPXXP010000001-NZ_JBPXXP010000016
//
LOCUS       NZ_JABJRC010000000   8105579 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Kribbella sandramycini strain ATCC 39419, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JABJRC000000000
VERSION     NZ_JABJRC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14917831
            Assembly: GCF_013131805.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kribbella sandramycini
  ORGANISM  Kribbella sandramycini
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Kribbellaceae; Kribbella.
REFERENCE   1  (bases 1 to 8105579)
  AUTHORS   Maclea,K.S. and Fair,J.L.
  TITLE     Genome sequence of Kribbella sandramycini ATCC 39419
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8105579)
  AUTHORS   Maclea,K.S. and Fair,J.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAY-2020) Department of Life Sciences, MacLea
            Laboratory, 88 Commercial Street, Manchester, NH 03101, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JABJRC000000000.1.
            The Kribbella sandramycini whole genome shotgun (WGS) project has
            the project accession NZ_JABJRC000000000.  This version of the
            project (01) has the accession number NZ_JABJRC010000000, and
            consists of sequences JABJRC010000001-JABJRC010000034.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from ATCC 39419.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 06-APR-2020
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 319.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013131805.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:32:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,533
            CDSs (total)                      :: 7,465
            Genes (coding)                    :: 7,433
            CDSs (with protein)               :: 7,433
            Genes (RNA)                       :: 68
            rRNAs                             :: 4, 5, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 4, 2 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 32
            CDSs (without protein)            :: 32
            Pseudo Genes (ambiguous residues) :: 0 of 32
            Pseudo Genes (frameshifted)       :: 3 of 32
            Pseudo Genes (incomplete)         :: 28 of 32
            Pseudo Genes (internal stop)      :: 2 of 32
            Pseudo Genes (multiple problems)  :: 1 of 32
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8105579
                     /organism="Kribbella sandramycini"
                     /mol_type="genomic DNA"
                     /strain="ATCC 39419"
                     /isolation_source="soil"
                     /culture_collection="ATCC:39419"
                     /type_material="type strain of Kribbella sandramycini"
                     /db_xref="taxon:60450"
                     /geo_loc_name="Mexico"
                     /collection_date="1984"
WGS         JABJRC010000001-JABJRC010000034
WGS_SCAFLD  NZ_JABJRC010000001-NZ_JABJRC010000034
//
LOCUS       NZ_JBFNEB010000000   3392167 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Kocuria carniphila strain 988, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBFNEB000000000
VERSION     NZ_JBFNEB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN42447476
            Assembly: GCF_041021225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kocuria carniphila
  ORGANISM  Kocuria carniphila
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Kocuria.
REFERENCE   1  (bases 1 to 3392167)
  AUTHORS   Pleshko,E.M. and Zhurina,M.V.
  TITLE     Kocuria Species Antibiotic Resistance Genes
  JOURNAL   Microbiology (N Y) 93 (S1), S126-S130 (2024)
  REMARK    DOI: 10.1134/S0026261724609722
REFERENCE   2  (bases 1 to 3392167)
  AUTHORS   Pleshko,E.M. and Zhurina,M.V.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2024) Faculty of Bioengineering and
            Bioinformatics, Moscow State University, Proisvodstvennaya, Moscow
            119619, Russia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBFNEB000000000.1.
            The Kocuria carniphila whole genome shotgun (WGS) project has the
            project accession NZ_JBFNEB000000000.  This version of the project
            (01) has the accession number NZ_JBFNEB010000000, and consists of
            sequences JBFNEB010000001-JBFNEB010000049.
            Bacteria and source DNA available from The Federal Research Centre
            'Fundamentals of Biotechnology'.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 732.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_041021225.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:48:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,087
            CDSs (total)                      :: 3,034
            Genes (coding)                    :: 2,997
            CDSs (with protein)               :: 2,997
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 6 of 37
            Pseudo Genes (incomplete)         :: 31 of 37
            Pseudo Genes (internal stop)      :: 2 of 37
            Pseudo Genes (multiple problems)  :: 2 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3392167
                     /organism="Kocuria carniphila"
                     /mol_type="genomic DNA"
                     /strain="988"
                     /isolation_source="Wall biofilm in a meat processing
                     factory"
                     /db_xref="taxon:262208"
                     /geo_loc_name="Russia: Moscow region"
                     /collection_date="2021-03"
WGS         JBFNEB010000001-JBFNEB010000049
WGS_SCAFLD  NZ_JBFNEB010000001-NZ_JBFNEB010000049
//
LOCUS       NZ_JBMDIH010000000   7351893 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Labrys methylaminiphilus subsp. lupini strain La1, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JBMDIH000000000
VERSION     NZ_JBMDIH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN47264006
            Assembly: GCF_051161885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Labrys methylaminiphilus subsp. lupini
  ORGANISM  Labrys methylaminiphilus subsp. lupini
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Xanthobacteraceae; Labrys.
REFERENCE   1  (bases 1 to 7351893)
  AUTHORS   Armijo,G., Cottet,L., Martinez-Hernandez,E., Levicoy,D.,
            Carrasco,M., Rupayan,A. and Salvo-Garrido,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2025) Leguminosa de Grano, Centro de Genomica
            Nutricional Agroacuicola, Las Heras 350, Temuco, Araucania 4781158,
            Chile
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBMDIH000000000.1.
            The Labrys methylaminiphilus subsp. lupini whole genome shotgun
            (WGS) project has the project accession NZ_JBMDIH000000000.  This
            version of the project (01) has the accession number
            NZ_JBMDIH010000000, and consists of sequences
            JBMDIH010000001-JBMDIH010000002.
            The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 50.0x
            Sequencing Technology  :: Illumina; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051161885.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:06:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,836
            CDSs (total)                      :: 6,769
            Genes (coding)                    :: 6,690
            CDSs (with protein)               :: 6,690
            Genes (RNA)                       :: 67
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 79
            CDSs (without protein)            :: 79
            Pseudo Genes (ambiguous residues) :: 0 of 79
            Pseudo Genes (frameshifted)       :: 34 of 79
            Pseudo Genes (incomplete)         :: 53 of 79
            Pseudo Genes (internal stop)      :: 7 of 79
            Pseudo Genes (multiple problems)  :: 14 of 79
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7351893
                     /organism="Labrys methylaminiphilus subsp. lupini"
                     /mol_type="genomic DNA"
                     /strain="La1"
                     /host="Lupinus luteus"
                     /sub_species="lupini"
                     /type_material="type strain of Labrys methylaminiphilus
                     subsp. lupini"
                     /db_xref="taxon:3404917"
                     /geo_loc_name="Chile: Temuco, Araucania"
                     /collection_date="2023"
WGS         JBMDIH010000001-JBMDIH010000002
WGS_SCAFLD  NZ_JBMDIH010000001-NZ_JBMDIH010000002
//
LOCUS       NZ_JBOCEB010000000   3895643 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Kocuria rosea strain 394, whole genome shotgun sequencing project.
ACCESSION   NZ_JBOCEB000000000
VERSION     NZ_JBOCEB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN48667756
            Assembly: GCF_051042755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kocuria rosea
  ORGANISM  Kocuria rosea
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Kocuria.
REFERENCE   1  (bases 1 to 3895643)
  AUTHORS   Zhurina,M.V., Pleshko,E.M., Mart'yanov,S.V., Ivanova,M.A. and
            Plakunov,V.K.
  TITLE     Non-Attached Biofilm Aggregates in Planktonic Cultures of Kocuria
            spp
  JOURNAL   Microbiology (N Y) 94 (S1), S16-S20 (2025)
  REMARK    DOI: 10.1134/S0026261725604245
REFERENCE   2  (bases 1 to 3895643)
  AUTHORS   Pleshko,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-MAY-2025) Faculty of Bioengineering and
            Bioinformatics, Moscow State University, 1-73 Leninskie Gory,
            Moscow 119234, Russia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBOCEB000000000.1.
            The Kocuria rosea whole genome shotgun (WGS) project has the
            project accession NZ_JBOCEB000000000.  This version of the project
            (01) has the accession number NZ_JBOCEB010000000, and consists of
            sequences JBOCEB010000001-JBOCEB010000095.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 299.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051042755.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:50:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,636
            CDSs (total)                      :: 3,581
            Genes (coding)                    :: 3,515
            CDSs (with protein)               :: 3,515
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 48
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 66
            CDSs (without protein)            :: 66
            Pseudo Genes (ambiguous residues) :: 0 of 66
            Pseudo Genes (frameshifted)       :: 14 of 66
            Pseudo Genes (incomplete)         :: 56 of 66
            Pseudo Genes (internal stop)      :: 4 of 66
            Pseudo Genes (multiple problems)  :: 7 of 66
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3895643
                     /organism="Kocuria rosea"
                     /mol_type="genomic DNA"
                     /strain="394"
                     /db_xref="taxon:1275"
WGS         JBOCEB010000001-JBOCEB010000095
WGS_SCAFLD  NZ_JBOCEB010000001-NZ_JBOCEB010000095
//
LOCUS       NZ_SGWL01000000      2047345 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Lactobacillus crispatus strain NCK1350, whole genome shotgun
            sequencing project.
ACCESSION   NZ_SGWL00000000
VERSION     NZ_SGWL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10922320
            Assembly: GCF_007713895.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lactobacillus crispatus
  ORGANISM  Lactobacillus crispatus
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactobacillus.
REFERENCE   1  (bases 1 to 2047345)
  AUTHORS   Hidalgo-Cantabrana,C., Goh,Y.J., Pan,M., Sanozky-Dawes,R. and
            Barrangou,R.
  TITLE     Genome editing using the endogenous type I CRISPR-Cas system in
            Lactobacillus crispatus
  JOURNAL   Proc Natl Acad Sci U S A 116 (32), 15774-15783 (2019)
   PUBMED   31341082
REFERENCE   2  (bases 1 to 2047345)
  AUTHORS   Hidalgo-Cantabrana,C., Goh,Y.J., Meichen,P., Sanozky-Dawes,R. and
            Barrangou,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-FEB-2019) Department of Food, Bioprocessing and
            Nutrition Science, North Carolina State University, 400 Dan Allen,
            Raleigh, NC 27695, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SGWL00000000.1.
            The Lactobacillus crispatus whole genome shotgun (WGS) project has
            the project accession NZ_SGWL00000000.  This version of the project
            (01) has the accession number NZ_SGWL01000000, and consists of
            sequences SGWL01000001-SGWL01000042.
            Bacteria and source DNA available from Rodolphe Barrangou.
            CRISPRlab, North Carolina State University, Raleigh, NC, USA.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date             :: 03-MAR-2017
            Assembly Method           :: SPAdes v. 03/03/2017
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: GCA_000091765.1
            Genome Coverage           :: 90.0x
            Sequencing Technology     :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007713895.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:05:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,092
            CDSs (total)                      :: 2,019
            Genes (coding)                    :: 1,939
            CDSs (with protein)               :: 1,939
            Genes (RNA)                       :: 73
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 63
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 80
            CDSs (without protein)            :: 80
            Pseudo Genes (ambiguous residues) :: 0 of 80
            Pseudo Genes (frameshifted)       :: 35 of 80
            Pseudo Genes (incomplete)         :: 42 of 80
            Pseudo Genes (internal stop)      :: 24 of 80
            Pseudo Genes (multiple problems)  :: 20 of 80
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2047345
                     /organism="Lactobacillus crispatus"
                     /mol_type="genomic DNA"
                     /strain="NCK1350"
                     /isolation_source="endoscopy"
                     /host="Homo sapiens"
                     /db_xref="taxon:47770"
                     /geo_loc_name="USA: North Carolina"
                     /collection_date="2016-01-01"
WGS         SGWL01000001-SGWL01000042
WGS_SCAFLD  NZ_SGWL01000001-NZ_SGWL01000042
//
LOCUS       NZ_VIVK01000000      8120218 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Kribbella amoyensis strain DSM 24683, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VIVK00000000
VERSION     NZ_VIVK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11512343
            Assembly: GCF_007828865.1
KEYWORDS    WGS; RefSeq.
SOURCE      Kribbella amoyensis
  ORGANISM  Kribbella amoyensis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Propionibacteriales; Kribbellaceae; Kribbella.
REFERENCE   1  (bases 1 to 8120218)
  AUTHORS   Klenk,H.-P.
  TITLE     Sequencing the genomes of 1000 actinobacteria strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8120218)
  AUTHORS   Klenk,H.-P., Huntemann,M., Clum,A., Pillay,M., Palaniappan,K.,
            Varghese,N., Mikhailova,N., Stamatis,D., Reddy,T., Daum,C.,
            Shapiro,N., Ivanova,N., Kyrpides,N. and Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-JUN-2019) Prokaryotic Super Group, DOE Joint Genome
            Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VIVK00000000.1.
            The Kribbella amoyensis whole genome shotgun (WGS) project has the
            project accession NZ_VIVK00000000.  This version of the project
            (01) has the accession number NZ_VIVK01000000, and consists of
            sequences VIVK01000001-VIVK01000008.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: HGAP v. smrtlink/6.0.0.47835, HGAP 4
                                      (0.2.1)
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 216.0x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007828865.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:32:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,593
            CDSs (total)                      :: 7,524
            Genes (coding)                    :: 7,474
            CDSs (with protein)               :: 7,474
            Genes (RNA)                       :: 69
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 8 of 50
            Pseudo Genes (incomplete)         :: 41 of 50
            Pseudo Genes (internal stop)      :: 3 of 50
            Pseudo Genes (multiple problems)  :: 2 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8120218
                     /organism="Kribbella amoyensis"
                     /mol_type="genomic DNA"
                     /strain="DSM 24683"
                     /culture_collection="DSM:24683"
                     /type_material="type strain of Kribbella amoyensis"
                     /db_xref="taxon:996641"
WGS         VIVK01000001-VIVK01000008
WGS_SCAFLD  NZ_VIVK01000001-NZ_VIVK01000008
//
LOCUS       NZ_JBWBWH010000000   2587449 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Lentilactobacillus kefiri strain MSR101, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBWBWH000000000
VERSION     NZ_JBWBWH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56506460
            Assembly: GCF_056175505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lentilactobacillus kefiri
  ORGANISM  Lentilactobacillus kefiri
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lentilactobacillus.
REFERENCE   1  (bases 1 to 2587449)
  AUTHORS   Zhao,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAR-2026) Department of Food Science and Technology,
            Shenzhen University, Shennan Boulevard, Shenzhen 518060, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBWH000000000.1.
            The Lentilactobacillus kefiri whole genome shotgun (WGS) project
            has the project accession NZ_JBWBWH000000000.  This version of the
            project (01) has the accession number NZ_JBWBWH010000000, and
            consists of sequences JBWBWH010000001-JBWBWH010000006.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from College of Chemistry and
            Environmental Engineering, Shenzhen University, Shenzhen, Guangdong
            518060, PR China.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2018
            Assembly Method        :: Flye v. May-2025
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 107.0x
            Sequencing Technology  :: PacBio Sequel
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056175505.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 19:09:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,546
            CDSs (total)                      :: 2,467
            Genes (coding)                    :: 2,405
            CDSs (with protein)               :: 2,405
            Genes (RNA)                       :: 79
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 62
            CDSs (without protein)            :: 62
            Pseudo Genes (ambiguous residues) :: 0 of 62
            Pseudo Genes (frameshifted)       :: 21 of 62
            Pseudo Genes (incomplete)         :: 30 of 62
            Pseudo Genes (internal stop)      :: 14 of 62
            Pseudo Genes (multiple problems)  :: 3 of 62
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2587449
                     /organism="Lentilactobacillus kefiri"
                     /mol_type="genomic DNA"
                     /strain="MSR101"
                     /isolation_source="milk [ENVO:00002006]"
                     /db_xref="taxon:33962"
                     /geo_loc_name="China: Shenzhen"
                     /lat_lon="22.5429 N 114.0596 E"
                     /collection_date="2017-09-11"
WGS         JBWBWH010000001-JBWBWH010000006
WGS_SCAFLD  NZ_CM149697
WGS_SCAFLD  NZ_JBWBWH010000002-NZ_JBWBWH010000006
//
LOCUS       NZ_JBWCAQ010000000   3324247 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Lactiplantibacillus plantarum strain S2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBWCAQ000000000
VERSION     NZ_JBWCAQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56485178
            Assembly: GCF_056175105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Lactiplantibacillus plantarum
  ORGANISM  Lactiplantibacillus plantarum
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Lactobacillaceae; Lactiplantibacillus.
REFERENCE   1  (bases 1 to 3324247)
  AUTHORS   Doo,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-MAR-2026) Department of Animal Biotechnology, Dankook
            University, Dandaero 119, Cheonan 31119, South Korea
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWCAQ000000000.1.
            The Lactiplantibacillus plantarum whole genome shotgun (WGS)
            project has the project accession NZ_JBWCAQ000000000.  This version
            of the project (01) has the accession number NZ_JBWCAQ010000000,
            and consists of sequence JBWCAQ010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Department of Animal
            Biotechnology, Dankook University, Cheonan,South Korea, 31116.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: MAY-2024
            Assembly Method        :: Canu v. 2.2; Flye v. 2.9.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 73.0x
            Sequencing Technology  :: Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056175105.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:44:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,197
            CDSs (total)                      :: 3,101
            Genes (coding)                    :: 3,067
            CDSs (with protein)               :: 3,067
            Genes (RNA)                       :: 96
            rRNAs                             :: 6, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 20 of 34
            Pseudo Genes (incomplete)         :: 8 of 34
            Pseudo Genes (internal stop)      :: 12 of 34
            Pseudo Genes (multiple problems)  :: 6 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3324247
                     /organism="Lactiplantibacillus plantarum"
                     /mol_type="genomic DNA"
                     /strain="S2"
                     /isolation_source="mustard leaf kimchi"
                     /db_xref="taxon:1590"
                     /geo_loc_name="South Korea: Seoul"
                     /collection_date="2022-05-04"
WGS         JBWCAQ010000001
WGS_SCAFLD  NZ_CM149695
//
LOCUS       NZ_JAIXIH010000000   7040586 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-49, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXIH000000000
VERSION     NZ_JAIXIH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906765
            Assembly: GCF_045794715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7040586)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7040586)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXIH000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXIH000000000.  This version of the
            project (01) has the accession number NZ_JAIXIH010000000, and
            consists of sequences JAIXIH010000001-JAIXIH010000382.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 31x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045794715.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:11:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,876
            CDSs (total)                      :: 6,805
            Genes (coding)                    :: 6,597
            CDSs (with protein)               :: 6,597
            Genes (RNA)                       :: 71
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 61
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 208
            CDSs (without protein)            :: 208
            Pseudo Genes (ambiguous residues) :: 0 of 208
            Pseudo Genes (frameshifted)       :: 42 of 208
            Pseudo Genes (incomplete)         :: 165 of 208
            Pseudo Genes (internal stop)      :: 14 of 208
            Pseudo Genes (multiple problems)  :: 12 of 208
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7040586
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-49"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2020"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXIH010000001-JAIXIH010000382
WGS_SCAFLD  NZ_JAIXIH010000001-NZ_JAIXIH010000382
//
LOCUS       NZ_VAIK01000000      2446025 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mannheimia haemolytica strain UGA-A6-160-1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VAIK00000000
VERSION     NZ_VAIK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10847998
            Assembly: GCF_007003485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2446025)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Genetic characterization of susceptible and multi-drug resistant
            Mannheimia haemolytica isolated from high-risk stocker calves prior
            to and after antimicrobial metaphylaxis
  JOURNAL   Vet Microbiol 235, 110-117 (2019)
   PUBMED   31282368
REFERENCE   2  (bases 1 to 2446025)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) POPH, Food Animal Health and Mangement
            Program, University of Georgia, 2200 College Station Road, Athens,
            GA 30602, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAIK00000000.1.
            The Mannheimia haemolytica whole genome shotgun (WGS) project has
            the project accession NZ_VAIK00000000.  This version of the project
            (01) has the accession number NZ_VAIK01000000, and consists of
            sequences VAIK01000001-VAIK01000118.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-JUN-2017
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 294x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007003485.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:06:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,480
            CDSs (total)                      :: 2,422
            Genes (coding)                    :: 2,326
            CDSs (with protein)               :: 2,326
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 96
            CDSs (without protein)            :: 96
            Pseudo Genes (ambiguous residues) :: 0 of 96
            Pseudo Genes (frameshifted)       :: 34 of 96
            Pseudo Genes (incomplete)         :: 59 of 96
            Pseudo Genes (internal stop)      :: 12 of 96
            Pseudo Genes (multiple problems)  :: 8 of 96
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2446025
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /strain="UGA-A6-160-1"
                     /isolation_source="week A6 calf 160 isolate 1"
                     /host="bovine"
                     /db_xref="taxon:75985"
                     /geo_loc_name="USA: Georgia"
                     /collection_date="2016-04-28"
                     /collected_by="Emily R. Snyder"
WGS         VAIK01000001-VAIK01000118
WGS_SCAFLD  NZ_VAIK01000001-NZ_VAIK01000118
//
LOCUS       NZ_JAIXIK010000000   7018677 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-46, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXIK000000000
VERSION     NZ_JAIXIK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906762
            Assembly: GCF_045794835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7018677)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7018677)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXIK000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXIK000000000.  This version of the
            project (01) has the accession number NZ_JAIXIK010000000, and
            consists of sequences JAIXIK010000001-JAIXIK010000199.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045794835.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:12:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,714
            CDSs (total)                      :: 6,654
            Genes (coding)                    :: 6,495
            CDSs (with protein)               :: 6,495
            Genes (RNA)                       :: 60
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 159
            CDSs (without protein)            :: 159
            Pseudo Genes (ambiguous residues) :: 0 of 159
            Pseudo Genes (frameshifted)       :: 37 of 159
            Pseudo Genes (incomplete)         :: 116 of 159
            Pseudo Genes (internal stop)      :: 16 of 159
            Pseudo Genes (multiple problems)  :: 10 of 159
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7018677
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-46"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2020"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXIK010000001-JAIXIK010000199
WGS_SCAFLD  NZ_JAIXIK010000001-NZ_JAIXIK010000199
//
LOCUS       NZ_VAHP01000000      2553583 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mannheimia haemolytica strain UGA-A1-20-1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VAHP00000000
VERSION     NZ_VAHP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10847977
            Assembly: GCF_007003875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2553583)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Genetic characterization of susceptible and multi-drug resistant
            Mannheimia haemolytica isolated from high-risk stocker calves prior
            to and after antimicrobial metaphylaxis
  JOURNAL   Vet Microbiol 235, 110-117 (2019)
   PUBMED   31282368
REFERENCE   2  (bases 1 to 2553583)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) POPH, Food Animal Health and Mangement
            Program, University of Georgia, 2200 College Station Road, Athens,
            GA 30602, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAHP00000000.1.
            The Mannheimia haemolytica whole genome shotgun (WGS) project has
            the project accession NZ_VAHP00000000.  This version of the project
            (01) has the accession number NZ_VAHP01000000, and consists of
            sequences VAHP01000001-VAHP01000154.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-JUN-2017
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 260x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007003875.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:08:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,637
            CDSs (total)                      :: 2,578
            Genes (coding)                    :: 2,494
            CDSs (with protein)               :: 2,494
            Genes (RNA)                       :: 59
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 84
            CDSs (without protein)            :: 84
            Pseudo Genes (ambiguous residues) :: 0 of 84
            Pseudo Genes (frameshifted)       :: 31 of 84
            Pseudo Genes (incomplete)         :: 45 of 84
            Pseudo Genes (internal stop)      :: 15 of 84
            Pseudo Genes (multiple problems)  :: 6 of 84
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2553583
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /strain="UGA-A1-20-1"
                     /isolation_source="week A1 calf 20 isolate 1"
                     /host="bovine"
                     /db_xref="taxon:75985"
                     /geo_loc_name="USA: Georgia"
                     /collection_date="2016-03-24"
                     /collected_by="Emily R. Snyder"
WGS         VAHP01000001-VAHP01000154
WGS_SCAFLD  NZ_VAHP01000001-NZ_VAHP01000154
//
LOCUS       NZ_VAHZ01000000      2520017 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mannheimia haemolytica strain UGA-A5-124-1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VAHZ00000000
VERSION     NZ_VAHZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10847987
            Assembly: GCF_007003685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2520017)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Genetic characterization of susceptible and multi-drug resistant
            Mannheimia haemolytica isolated from high-risk stocker calves prior
            to and after antimicrobial metaphylaxis
  JOURNAL   Vet Microbiol 235, 110-117 (2019)
   PUBMED   31282368
REFERENCE   2  (bases 1 to 2520017)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) POPH, Food Animal Health and Mangement
            Program, University of Georgia, 2200 College Station Road, Athens,
            GA 30602, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAHZ00000000.1.
            The Mannheimia haemolytica whole genome shotgun (WGS) project has
            the project accession NZ_VAHZ00000000.  This version of the project
            (01) has the accession number NZ_VAHZ01000000, and consists of
            sequences VAHZ01000001-VAHZ01000143.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-JUN-2017
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 248x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007003685.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:05:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,591
            CDSs (total)                      :: 2,531
            Genes (coding)                    :: 2,436
            CDSs (with protein)               :: 2,436
            Genes (RNA)                       :: 60
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 95
            CDSs (without protein)            :: 95
            Pseudo Genes (ambiguous residues) :: 0 of 95
            Pseudo Genes (frameshifted)       :: 32 of 95
            Pseudo Genes (incomplete)         :: 57 of 95
            Pseudo Genes (internal stop)      :: 14 of 95
            Pseudo Genes (multiple problems)  :: 7 of 95
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2520017
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /strain="UGA-A5-124-1"
                     /isolation_source="week A5 calf 124 isolate 1"
                     /host="bovine"
                     /db_xref="taxon:75985"
                     /geo_loc_name="USA: Georgia"
                     /collection_date="2016-04-21"
                     /collected_by="Emily R. Snyder"
WGS         VAHZ01000001-VAHZ01000143
WGS_SCAFLD  NZ_VAHZ01000001-NZ_VAHZ01000143
//
LOCUS       NZ_JAIXIN010000000   7118504 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-43, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXIN000000000
VERSION     NZ_JAIXIN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906759
            Assembly: GCF_045794865.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7118504)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7118504)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXIN000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXIN000000000.  This version of the
            project (01) has the accession number NZ_JAIXIN010000000, and
            consists of sequences JAIXIN010000001-JAIXIN010000156.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 141x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045794865.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:16:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,817
            CDSs (total)                      :: 6,756
            Genes (coding)                    :: 6,644
            CDSs (with protein)               :: 6,644
            Genes (RNA)                       :: 61
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 112
            CDSs (without protein)            :: 112
            Pseudo Genes (ambiguous residues) :: 0 of 112
            Pseudo Genes (frameshifted)       :: 22 of 112
            Pseudo Genes (incomplete)         :: 97 of 112
            Pseudo Genes (internal stop)      :: 9 of 112
            Pseudo Genes (multiple problems)  :: 13 of 112
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7118504
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-43"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2019"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXIN010000001-JAIXIN010000156
WGS_SCAFLD  NZ_JAIXIN010000001-NZ_JAIXIN010000156
//
LOCUS       NZ_CBDCHJ010000000   4394668 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Marinovum algicola isolate
            f680534b-c7a7-440f-9d93-9404fc717549, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CBDCHJ000000000
VERSION     NZ_CBDCHJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA115885789
            Sequence Read Archive: ERR11217141, ERR11242122, ERR11641136,
            ERR12071212, ERR14209098, ERR14209099, ERR14209100, ERR14224587
            Assembly: GCF_965217165.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Marinovum algicola (dinoflagellate metagenome)
  ORGANISM  Marinovum algicola
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Marinovum.
REFERENCE   1  (bases 1 to 4394668)
  CONSRTM   Wellcome Sanger Tree of Life Programme
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAR-2025) WELLCOME SANGER INSTITUTE, Tree of Life,
            Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CBDCHJ000000000.1.
            The Marinovum algicola whole genome shotgun (WGS) project has the
            project accession NZ_CBDCHJ000000000.  This version of the project
            (01) has the accession number NZ_CBDCHJ010000000, and consists of
            sequences CBDCHJ010000001-CBDCHJ010000006.
            The metagenome-assembled genome assembly
            pyNocScin1.Marinovum_algicola_1.1 is based on 12x PacBio data
            generated by the Aquatic Symbiosis Genomics Project
            (https://www.aquaticsymbiosisgenomics.org/). The assembly process
            included the following sequence of steps: initial PacBio assembly
            generation with metaMDBG and coverage-, graph-, and HiC-based
            contig binning.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_965217165.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 14:10:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,294
            CDSs (total)                      :: 4,238
            Genes (coding)                    :: 4,158
            CDSs (with protein)               :: 4,158
            Genes (RNA)                       :: 56
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 80
            CDSs (without protein)            :: 80
            Pseudo Genes (ambiguous residues) :: 0 of 80
            Pseudo Genes (frameshifted)       :: 27 of 80
            Pseudo Genes (incomplete)         :: 62 of 80
            Pseudo Genes (internal stop)      :: 8 of 80
            Pseudo Genes (multiple problems)  :: 15 of 80
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4394668
                     /organism="Marinovum algicola"
                     /mol_type="genomic DNA"
                     /isolate="f680534b-c7a7-440f-9d93-9404fc717549"
                     /isolation_source="Dinoflagellate: Noctiluca scintillans"
                     /db_xref="taxon:42444"
                     /environmental_sample
                     /geo_loc_name="Oman"
                     /collection_date="2015-01-13"
                     /metagenome_source="dinoflagellate metagenome"
                     /metagenomic
WGS         CBDCHJ010000001-CBDCHJ010000006
WGS_SCAFLD  NZ_CBDCHJ010000001-NZ_CBDCHJ010000006
//
LOCUS       NZ_VAIJ01000000      2514934 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mannheimia haemolytica strain UGA-A6-159-3, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VAIJ00000000
VERSION     NZ_VAIJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10847997
            Assembly: GCF_007003545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2514934)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Genetic characterization of susceptible and multi-drug resistant
            Mannheimia haemolytica isolated from high-risk stocker calves prior
            to and after antimicrobial metaphylaxis
  JOURNAL   Vet Microbiol 235, 110-117 (2019)
   PUBMED   31282368
REFERENCE   2  (bases 1 to 2514934)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) POPH, Food Animal Health and Mangement
            Program, University of Georgia, 2200 College Station Road, Athens,
            GA 30602, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAIJ00000000.1.
            The Mannheimia haemolytica whole genome shotgun (WGS) project has
            the project accession NZ_VAIJ00000000.  This version of the project
            (01) has the accession number NZ_VAIJ01000000, and consists of
            sequences VAIJ01000001-VAIJ01000108.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-JUN-2017
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 354x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007003545.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:09:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,563
            CDSs (total)                      :: 2,505
            Genes (coding)                    :: 2,428
            CDSs (with protein)               :: 2,428
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 33 of 77
            Pseudo Genes (incomplete)         :: 38 of 77
            Pseudo Genes (internal stop)      :: 14 of 77
            Pseudo Genes (multiple problems)  :: 7 of 77
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2514934
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /strain="UGA-A6-159-3"
                     /isolation_source="week A6 calf 159 isolate 3"
                     /host="bovine"
                     /db_xref="taxon:75985"
                     /geo_loc_name="USA: Georgia"
                     /collection_date="2016-04-28"
                     /collected_by="Emily R. Snyder"
WGS         VAIJ01000001-VAIJ01000108
WGS_SCAFLD  NZ_VAIJ01000001-NZ_VAIJ01000108
//
LOCUS       NZ_VAID01000000      2514475 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mannheimia haemolytica strain UGA-A6-134-2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VAID00000000
VERSION     NZ_VAID00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10847991
            Assembly: GCF_007003615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2514475)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Genetic characterization of susceptible and multi-drug resistant
            Mannheimia haemolytica isolated from high-risk stocker calves prior
            to and after antimicrobial metaphylaxis
  JOURNAL   Vet Microbiol 235, 110-117 (2019)
   PUBMED   31282368
REFERENCE   2  (bases 1 to 2514475)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) POPH, Food Animal Health and Mangement
            Program, University of Georgia, 2200 College Station Road, Athens,
            GA 30602, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAID00000000.1.
            The Mannheimia haemolytica whole genome shotgun (WGS) project has
            the project accession NZ_VAID00000000.  This version of the project
            (01) has the accession number NZ_VAID01000000, and consists of
            sequences VAID01000001-VAID01000297.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-JUN-2017
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 265x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007003615.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:09:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,670
            CDSs (total)                      :: 2,612
            Genes (coding)                    :: 2,460
            CDSs (with protein)               :: 2,460
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 152
            CDSs (without protein)            :: 152
            Pseudo Genes (ambiguous residues) :: 0 of 152
            Pseudo Genes (frameshifted)       :: 32 of 152
            Pseudo Genes (incomplete)         :: 115 of 152
            Pseudo Genes (internal stop)      :: 15 of 152
            Pseudo Genes (multiple problems)  :: 9 of 152
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2514475
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /strain="UGA-A6-134-2"
                     /isolation_source="week A6 calf 134 isolate 2"
                     /host="bovine"
                     /db_xref="taxon:75985"
                     /geo_loc_name="USA: Georgia"
                     /collection_date="2016-04-26"
                     /collected_by="Emily R. Snyder"
WGS         VAID01000001-VAID01000297
WGS_SCAFLD  NZ_VAID01000001-NZ_VAID01000297
//
LOCUS       NZ_JBJKNS010000000   7391331 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PA6, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKNS000000000
VERSION     NZ_JBJKNS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45049794
            Assembly: GCF_045786765.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7391331)
  AUTHORS   Zhang,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) Department of Clinical Microbiology, First
            Affiliated Hospital of Nanchang University, Nanchang University,
            Nanchang, Yong wai zheng jie No. 17, Nanchang 330006, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKNS000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JBJKNS000000000.  This version of the
            project (01) has the accession number NZ_JBJKNS010000000, and
            consists of sequences JBJKNS010000001-JBJKNS010000108.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. 1.2.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 839.0x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045786765.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:57:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,199
            CDSs (total)                      :: 7,126
            Genes (coding)                    :: 7,039
            CDSs (with protein)               :: 7,039
            Genes (RNA)                       :: 73
            rRNAs                             :: 3, 1, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 4 (23S)
            tRNAs                             :: 61
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 87
            CDSs (without protein)            :: 87
            Pseudo Genes (ambiguous residues) :: 0 of 87
            Pseudo Genes (frameshifted)       :: 7 of 87
            Pseudo Genes (incomplete)         :: 81 of 87
            Pseudo Genes (internal stop)      :: 2 of 87
            Pseudo Genes (multiple problems)  :: 3 of 87
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7391331
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PA6"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="China: Nanchang"
                     /collection_date="2021/2022"
WGS         JBJKNS010000001-JBJKNS010000108
WGS_SCAFLD  NZ_JBJKNS010000001-NZ_JBJKNS010000108
//
LOCUS       NZ_CDVDVY010000000   3805691 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Marinobacter nauticus isolate MarMAG_072687, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVDVY000000000
VERSION     NZ_CDVDVY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737570
            Assembly: GCF_977659405.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Marinobacter nauticus (marine metagenome)
  ORGANISM  Marinobacter nauticus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Marinobacteraceae; Marinobacter.
REFERENCE   1  (bases 1 to 3805691)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVDVY000000000.1.
            The Marinobacter nauticus whole genome shotgun (WGS) project has
            the project accession NZ_CDVDVY000000000.  This version of the
            project (01) has the accession number NZ_CDVDVY010000000, and
            consists of sequences CDVDVY010000001-CDVDVY010000079.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977659405.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:25:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,489
            CDSs (total)                      :: 3,453
            Genes (coding)                    :: 3,429
            CDSs (with protein)               :: 3,429
            Genes (RNA)                       :: 36
            rRNAs                             :: 2, 1 (5S, 16S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 29
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 1 of 24
            Pseudo Genes (incomplete)         :: 24 of 24
            Pseudo Genes (internal stop)      :: 2 of 24
            Pseudo Genes (multiple problems)  :: 3 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3805691
                     /organism="Marinobacter nauticus"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_072687"
                     /isolation_source="Mariana Trench, free-living
                     microorganism hadal water (9,600 m)"
                     /db_xref="taxon:2743"
                     /environmental_sample
                     /geo_loc_name="Pacific Ocean"
                     /collection_date="2016-09-16"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVDVY010000001-CDVDVY010000079
WGS_SCAFLD  NZ_CDVDVY010000001-NZ_CDVDVY010000079
//
LOCUS       NZ_JBJFMK010000000   6946754 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain LYM-A4, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJFMK000000000
VERSION     NZ_JBJFMK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44671621
            Assembly: GCF_045763755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6946754)
  AUTHORS   Gagaletsios,L.A. and Papagiannitsis,C.
  TITLE     Isolation of Carbapenemase-Producing Pseudomonas aeruginosa from a
            waste-water sample collected from a Greek University Hospital
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6946754)
  AUTHORS   Gagaletsios,L.A. and Papagiannitsis,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-NOV-2024) Faculty of Medicine, University of
            Thessaly, Mezourlo, Larissa, Thessaly 41110, Greece
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJFMK000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JBJFMK000000000.  This version of the
            project (01) has the accession number NZ_JBJFMK010000000, and
            consists of sequences JBJFMK010000001-JBJFMK010000157.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045763755.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:50:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,602
            CDSs (total)                      :: 6,539
            Genes (coding)                    :: 6,438
            CDSs (with protein)               :: 6,438
            Genes (RNA)                       :: 63
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 101
            CDSs (without protein)            :: 101
            Pseudo Genes (ambiguous residues) :: 0 of 101
            Pseudo Genes (frameshifted)       :: 18 of 101
            Pseudo Genes (incomplete)         :: 87 of 101
            Pseudo Genes (internal stop)      :: 3 of 101
            Pseudo Genes (multiple problems)  :: 6 of 101
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6946754
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="LYM-A4"
                     /isolation_source="waste-water"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Greece: Larissa, Thessaly"
                     /lat_lon="39.6390 N 22.4191 E"
                     /collection_date="2023-12"
                     /collected_by="Lazaros Gagaletsios"
WGS         JBJFMK010000001-JBJFMK010000157
WGS_SCAFLD  NZ_JBJFMK010000001-NZ_JBJFMK010000157
//
LOCUS       NZ_JAIXIM010000000   6906885 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-44, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXIM000000000
VERSION     NZ_JAIXIM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906760
            Assembly: GCF_045794825.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6906885)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6906885)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXIM000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXIM000000000.  This version of the
            project (01) has the accession number NZ_JAIXIM010000000, and
            consists of sequences JAIXIM010000001-JAIXIM010000192.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 72x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045794825.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:04:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,661
            CDSs (total)                      :: 6,598
            Genes (coding)                    :: 6,454
            CDSs (with protein)               :: 6,454
            Genes (RNA)                       :: 63
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 144
            CDSs (without protein)            :: 144
            Pseudo Genes (ambiguous residues) :: 0 of 144
            Pseudo Genes (frameshifted)       :: 27 of 144
            Pseudo Genes (incomplete)         :: 121 of 144
            Pseudo Genes (internal stop)      :: 6 of 144
            Pseudo Genes (multiple problems)  :: 9 of 144
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6906885
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-44"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2019"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXIM010000001-JAIXIM010000192
WGS_SCAFLD  NZ_JAIXIM010000001-NZ_JAIXIM010000192
//
LOCUS       NZ_JBWBVA010000000   4941620 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Metabacillus idriensis strain QJM3NY_41, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBWBVA000000000
VERSION     NZ_JBWBVA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449751
            Assembly: GCF_056173605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Metabacillus idriensis
  ORGANISM  Metabacillus idriensis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Metabacillus.
REFERENCE   1  (bases 1 to 4941620)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4941620)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBVA000000000.1.
            The Metabacillus idriensis whole genome shotgun (WGS) project has
            the project accession NZ_JBWBVA000000000.  This version of the
            project (01) has the accession number NZ_JBWBVA010000000, and
            consists of sequences JBWBVA010000001-JBWBVA010000003.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 122.9x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173605.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 18:26:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,068
            CDSs (total)                      :: 4,941
            Genes (coding)                    :: 4,867
            CDSs (with protein)               :: 4,867
            Genes (RNA)                       :: 127
            rRNAs                             :: 11, 11, 11 (5S, 16S, 23S)
            complete rRNAs                    :: 11, 11, 11 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 74
            CDSs (without protein)            :: 74
            Pseudo Genes (ambiguous residues) :: 0 of 74
            Pseudo Genes (frameshifted)       :: 36 of 74
            Pseudo Genes (incomplete)         :: 40 of 74
            Pseudo Genes (internal stop)      :: 12 of 74
            Pseudo Genes (multiple problems)  :: 13 of 74
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4941620
                     /organism="Metabacillus idriensis"
                     /mol_type="genomic DNA"
                     /strain="QJM3NY_41"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:324768"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBVA010000001-JBWBVA010000003
WGS_SCAFLD  NZ_CM149682
WGS_SCAFLD  NZ_JBWBVA010000002-NZ_JBWBVA010000003
//
LOCUS       NZ_JBWBUS010000000   4775414 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mesobacillus sp. QJM3NY_10, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWBUS000000000
VERSION     NZ_JBWBUS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449761
            Assembly: GCF_056173465.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mesobacillus sp. QJM3NY_10
  ORGANISM  Mesobacillus sp. QJM3NY_10
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Mesobacillus.
REFERENCE   1  (bases 1 to 4775414)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4775414)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBUS000000000.1.
            The Mesobacillus sp. QJM3NY_10 whole genome shotgun (WGS) project
            has the project accession NZ_JBWBUS000000000.  This version of the
            project (01) has the accession number NZ_JBWBUS010000000, and
            consists of sequence JBWBUS010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 79.2x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173465.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:50:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,756
            CDSs (total)                      :: 4,633
            Genes (coding)                    :: 4,596
            CDSs (with protein)               :: 4,596
            Genes (RNA)                       :: 123
            rRNAs                             :: 11, 11, 11 (5S, 16S, 23S)
            complete rRNAs                    :: 11, 11, 11 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 9 of 37
            Pseudo Genes (incomplete)         :: 24 of 37
            Pseudo Genes (internal stop)      :: 6 of 37
            Pseudo Genes (multiple problems)  :: 2 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4775414
                     /organism="Mesobacillus sp. QJM3NY_10"
                     /mol_type="genomic DNA"
                     /strain="QJM3NY_10"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569821"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBUS010000001
WGS_SCAFLD  NZ_CM149675
//
LOCUS       NZ_JABAOK010000000   5294967 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mycobacteroides abscessus strain 1322-S0, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JABAOK000000000
VERSION     NZ_JABAOK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14548548
            Assembly: GCF_012845855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mycobacteroides abscessus (Mycobacterium abscessus)
  ORGANISM  Mycobacteroides abscessus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacteroides.
REFERENCE   1  (bases 1 to 5294967)
  AUTHORS   Chen,J., Lin,S., Zhang,Y. and Wang,S.
  TITLE     Mycobacterium abscessus isolated from a patient with respiratory
            tract infection
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5294967)
  AUTHORS   Chen,J., Lin,S., Zhang,Y. and Wang,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-APR-2020) Infectious Disease, Huashan Hospital, Fudan
            University, Middle Wulumuqi Street 12, Shanghai, Shanghai 200040,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JABAOK000000000.1.
            The Mycobacteroides abscessus whole genome shotgun (WGS) project
            has the project accession NZ_JABAOK000000000.  This version of the
            project (01) has the accession number NZ_JABAOK010000000, and
            consists of sequences JABAOK010000001-JABAOK010000003.
            Bacteria and source DNA available from Jiazhen Chen, Department of
            Infectious Disease, Huashan Hospital, Fudan University, Shanghai,
            China.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 01-APR-2020
            Assembly Method        :: SPAdes v. April-2020
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 140.0x
            Sequencing Technology  :: Illumina MiSeq; Oxford Nanopore GridION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_012845855.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:36:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,350
            CDSs (total)                      :: 5,261
            Genes (coding)                    :: 5,207
            CDSs (with protein)               :: 5,207
            Genes (RNA)                       :: 89
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 54
            CDSs (without protein)            :: 54
            Pseudo Genes (ambiguous residues) :: 0 of 54
            Pseudo Genes (frameshifted)       :: 22 of 54
            Pseudo Genes (incomplete)         :: 36 of 54
            Pseudo Genes (internal stop)      :: 1 of 54
            Pseudo Genes (multiple problems)  :: 5 of 54
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5294967
                     /organism="Mycobacteroides abscessus"
                     /mol_type="genomic DNA"
                     /strain="1322-S0"
                     /isolation_source="isolated from a patient with
                     respiratory tract infection"
                     /host="Homo sapiens"
                     /db_xref="taxon:36809"
                     /geo_loc_name="China: Shanghai"
                     /lat_lon="31.22 N 121.44 E"
                     /collection_date="2019"
                     /collected_by="Huashan Hospital, Fudan University,
                     Shanghai, China"
WGS         JABAOK010000001-JABAOK010000003
WGS_SCAFLD  NZ_JABAOK010000001-NZ_JABAOK010000003
//
LOCUS       NZ_CADEAX010000000   6655292 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Nocardiopsis dassonvillei subsp. crassaminis strain D1, whole
            genome shotgun sequencing project.
ACCESSION   NZ_CADEAX000000000
VERSION     NZ_CADEAX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA6623700
            Assembly: GCF_902825375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Nocardiopsis dassonvillei subsp. crassaminis
  ORGANISM  Nocardiopsis dassonvillei subsp. crassaminis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Nocardiopsidaceae; Nocardiopsis.
REFERENCE   1
  AUTHORS   Camacho I,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-MAR-2020) Centre for Industrial Biotechnology
            Studies, Patricio Lumumba, Cuba
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CADEAX000000000.1.
            The Nocardiopsis dassonvillei subsp. crassaminis whole genome
            shotgun (WGS) project has the project accession NZ_CADEAX000000000.
            This version of the project (01) has the accession number
            NZ_CADEAX010000000, and consists of sequences
            CADEAX010000001-CADEAX010000697.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_902825375.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:40:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,123
            CDSs (total)                      :: 6,061
            Genes (coding)                    :: 5,834
            CDSs (with protein)               :: 5,834
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 227
            CDSs (without protein)            :: 227
            Pseudo Genes (ambiguous residues) :: 0 of 227
            Pseudo Genes (frameshifted)       :: 4 of 227
            Pseudo Genes (incomplete)         :: 224 of 227
            Pseudo Genes (internal stop)      :: 1 of 227
            Pseudo Genes (multiple problems)  :: 2 of 227
            CRISPR Arrays                     :: 14
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6655292
                     /organism="Nocardiopsis dassonvillei subsp. crassaminis"
                     /mol_type="genomic DNA"
                     /strain="D1"
                     /isolation_source="Freshwater"
                     /sub_species="crassaminis"
                     /type_material="type strain of Nocardiopsis dassonvillei
                     subsp. crassaminis"
                     /db_xref="taxon:2580523"
                     /geo_loc_name="Cuba"
                     /collection_date="2017"
WGS         CADEAX010000001-CADEAX010000697
WGS_SCAFLD  NZ_CADEAX010000001-NZ_CADEAX010000697
//
LOCUS       NZ_JBWBUT010000000   5200376 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Marinomonas sp. iso_65, whole genome shotgun sequencing project.
ACCESSION   NZ_JBWBUT000000000
VERSION     NZ_JBWBUT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449760
            Assembly: GCF_056173445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Marinomonas sp. iso_65
  ORGANISM  Marinomonas sp. iso_65
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Oceanospirillaceae; Marinomonas.
REFERENCE   1  (bases 1 to 5200376)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5200376)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBUT000000000.1.
            The Marinomonas sp. iso_65 whole genome shotgun (WGS) project has
            the project accession NZ_JBWBUT000000000.  This version of the
            project (01) has the accession number NZ_JBWBUT010000000, and
            consists of sequence JBWBUT010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 134.3x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173445.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:47:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,784
            CDSs (total)                      :: 4,671
            Genes (coding)                    :: 4,614
            CDSs (with protein)               :: 4,614
            Genes (RNA)                       :: 113
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 57
            CDSs (without protein)            :: 57
            Pseudo Genes (ambiguous residues) :: 0 of 57
            Pseudo Genes (frameshifted)       :: 15 of 57
            Pseudo Genes (incomplete)         :: 42 of 57
            Pseudo Genes (internal stop)      :: 9 of 57
            Pseudo Genes (multiple problems)  :: 9 of 57
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5200376
                     /organism="Marinomonas sp. iso_65"
                     /mol_type="genomic DNA"
                     /strain="iso_65"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569820"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBUT010000001
WGS_SCAFLD  NZ_CM149674
//
LOCUS       NZ_JBWBUQ010000000   2541901 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Micrococcus sp. iso_239, whole genome shotgun sequencing project.
ACCESSION   NZ_JBWBUQ000000000
VERSION     NZ_JBWBUQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449765
            Assembly: GCF_056173395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Micrococcus sp. iso_239
  ORGANISM  Micrococcus sp. iso_239
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Micrococcus.
REFERENCE   1  (bases 1 to 2541901)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2541901)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBUQ000000000.1.
            The Micrococcus sp. iso_239 whole genome shotgun (WGS) project has
            the project accession NZ_JBWBUQ000000000.  This version of the
            project (01) has the accession number NZ_JBWBUQ010000000, and
            consists of sequence JBWBUQ010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 47.6x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173395.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:42:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,375
            CDSs (total)                      :: 2,318
            Genes (coding)                    :: 2,276
            CDSs (with protein)               :: 2,276
            Genes (RNA)                       :: 57
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 11 of 42
            Pseudo Genes (incomplete)         :: 37 of 42
            Pseudo Genes (internal stop)      :: 3 of 42
            Pseudo Genes (multiple problems)  :: 8 of 42
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2541901
                     /organism="Micrococcus sp. iso_239"
                     /mol_type="genomic DNA"
                     /strain="iso_239"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569825"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBUQ010000001
WGS_SCAFLD  NZ_CM149672
//
LOCUS       NZ_WNCC01000000      2872786 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Parasutterella excrementihominis strain BIOML-A11, whole genome
            shotgun sequencing project.
ACCESSION   NZ_WNCC00000000
VERSION     NZ_WNCC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11946277
            Assembly: GCF_009719355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Parasutterella excrementihominis
  ORGANISM  Parasutterella excrementihominis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Sutterellaceae; Parasutterella.
REFERENCE   1  (bases 1 to 2872786)
  AUTHORS   Poyet,M., Groussin,M., Gibbons,S.M., Avila-Pacheco,J., Jiang,X.,
            Kearney,S.M., Perrotta,A.R., Berdy,B., Zhao,S., Lieberman,T.D.,
            Swanson,P.K., Smith,M., Roesemann,S., Alexander,J.E., Rich,S.A.,
            Livny,J., Vlamakis,H., Clish,C., Bullock,K., Deik,A., Scott,J.,
            Pierce,K.A., Xavier,R.J. and Alm,E.J.
  TITLE     A library of human gut bacterial isolates paired with longitudinal
            multiomics data enables mechanistic microbiome research
  JOURNAL   Nat Med 25 (9), 1442-1452 (2019)
   PUBMED   31477907
REFERENCE   2  (bases 1 to 2872786)
  AUTHORS   Poyet,M., Groussin,M., Gibbons,S., Xavier,R. and Alm,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-NOV-2019) Biological Engineering, Massachusetts
            Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA
            02139, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WNCC00000000.1.
            The Parasutterella excrementihominis whole genome shotgun (WGS)
            project has the project accession NZ_WNCC00000000.  This version of
            the project (01) has the accession number NZ_WNCC01000000, and
            consists of sequences WNCC01000001-WNCC01000113.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 302.522x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009719355.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:33:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,596
            CDSs (total)                      :: 2,519
            Genes (coding)                    :: 2,485
            CDSs (with protein)               :: 2,485
            Genes (RNA)                       :: 77
            rRNAs                             :: 7, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 7 (5S)
            tRNAs                             :: 65
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 34
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 6 of 34
            Pseudo Genes (incomplete)         :: 23 of 34
            Pseudo Genes (internal stop)      :: 7 of 34
            Pseudo Genes (multiple problems)  :: 2 of 34
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2872786
                     /organism="Parasutterella excrementihominis"
                     /mol_type="genomic DNA"
                     /strain="BIOML-A11"
                     /isolation_source="fecal material [ENVO:00002003]"
                     /host="Homo sapiens"
                     /db_xref="taxon:487175"
                     /geo_loc_name="USA:Boston"
                     /lat_lon="42.36 N 71.06 W"
                     /collection_date="2016-05-12"
WGS         WNCC01000001-WNCC01000113
WGS_SCAFLD  NZ_WNCC01000001-NZ_WNCC01000113
//
LOCUS       NZ_JBGFFH010000000   3887942 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Microbacterium sp. LjRoot205, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBGFFH000000000
VERSION     NZ_JBGFFH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN42959551
            Assembly: GCF_056175745.1
KEYWORDS    WGS; RefSeq.
SOURCE      Microbacterium sp. LjRoot205
  ORGANISM  Microbacterium sp. LjRoot205
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Microbacteriaceae; Microbacterium.
REFERENCE   1  (bases 1 to 3887942)
  AUTHORS   Selten,G., Lamouche,F., Gomez Repolles,A., Tao,K., Blahovska,Z. and
            Radutoiu,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-AUG-2024) Plant-Microbe Interactions, Utrecht
            University, Padualaan 8, Utrecht, Utrecht 3584 CH, Netherlands
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGFFH000000000.1.
            The Microbacterium sp. LjRoot205 whole genome shotgun (WGS) project
            has the project accession NZ_JBGFFH000000000.  This version of the
            project (01) has the accession number NZ_JBGFFH010000000, and
            consists of sequences JBGFFH010000001-JBGFFH010000023.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: A5 v. A5-miseq version 20160825
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 27x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056175745.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:45:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,834
            CDSs (total)                      :: 3,781
            Genes (coding)                    :: 3,756
            CDSs (with protein)               :: 3,756
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 25
            CDSs (without protein)            :: 25
            Pseudo Genes (ambiguous residues) :: 0 of 25
            Pseudo Genes (frameshifted)       :: 6 of 25
            Pseudo Genes (incomplete)         :: 19 of 25
            Pseudo Genes (internal stop)      :: 2 of 25
            Pseudo Genes (multiple problems)  :: 2 of 25
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3887942
                     /organism="Microbacterium sp. LjRoot205"
                     /mol_type="genomic DNA"
                     /strain="LjRoot205"
                     /isolation_source="root"
                     /host="Lotus japonicus Gifu"
                     /db_xref="taxon:3240876"
                     /geo_loc_name="Germany: Cologne"
                     /collection_date="2017"
                     /identified_by="Gijs Selten and Adrian Gomez Repolles"
WGS         JBGFFH010000001-JBGFFH010000023
WGS_SCAFLD  NZ_JBGFFH010000001-NZ_JBGFFH010000023
//
LOCUS       NZ_JACBPT010000000   5084065 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Phocaeicola vulgatus strain FGZY37K4, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JACBPT000000000
VERSION     NZ_JACBPT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN15065539
            Assembly: GCF_020827705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Phocaeicola vulgatus
  ORGANISM  Phocaeicola vulgatus
            Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales;
            Bacteroidaceae; Phocaeicola.
REFERENCE   1  (bases 1 to 5084065)
  AUTHORS   Li,S., Wang,C., Zhang,C., Luo,Y., Cheng,Q., Yu,L. and Sun,Z.
  TITLE     Evaluation of the Effects of Different Bacteroides vulgatus Strains
            against DSS-Induced Colitis
  JOURNAL   J Immunol Res 2021, 9117805 (2021)
   PUBMED   34195297
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5084065)
  AUTHORS   Wang,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-JUN-2020) Food, Jiangnan University, Lihu 1800, Wuxi
            214122, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JACBPT000000000.1.
            The Phocaeicola vulgatus whole genome shotgun (WGS) project has the
            project accession NZ_JACBPT000000000.  This version of the project
            (01) has the accession number NZ_JACBPT010000000, and consists of
            sequences JACBPT010000001-JACBPT010000206.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: FALCON v. 2.3 OR MAY-2011
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 12.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_020827705.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:36:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,368
            CDSs (total)                      :: 4,291
            Genes (coding)                    :: 4,149
            CDSs (with protein)               :: 4,149
            Genes (RNA)                       :: 77
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 142
            CDSs (without protein)            :: 142
            Pseudo Genes (ambiguous residues) :: 0 of 142
            Pseudo Genes (frameshifted)       :: 49 of 142
            Pseudo Genes (incomplete)         :: 101 of 142
            Pseudo Genes (internal stop)      :: 26 of 142
            Pseudo Genes (multiple problems)  :: 27 of 142
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5084065
                     /organism="Phocaeicola vulgatus"
                     /mol_type="genomic DNA"
                     /strain="FGZY37K4"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:821"
                     /geo_loc_name="China"
                     /collection_date="2018-10-10"
WGS         JACBPT010000001-JACBPT010000206
WGS_SCAFLD  NZ_JACBPT010000001-NZ_JACBPT010000206
//
LOCUS       NZ_JAAOOV010000000   5073687 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mycobacteroides chelonae strain Myco2b, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAAOOV000000000
VERSION     NZ_JAAOOV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13542595
            Assembly: GCF_015700835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mycobacteroides chelonae (Mycobacterium chelonae)
  ORGANISM  Mycobacteroides chelonae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacteroides.
REFERENCE   1  (bases 1 to 5073687)
  AUTHORS   Gu,C.H., Zhao,C., Hofstaedter,C., Tebas,P., Glaser,L.,
            Baldassano,R., Bittinger,K., Mattei,L.M. and Bushman,F.D.
  TITLE     Investigating hospital Mycobacterium chelonae infection using whole
            genome sequencing and hybrid assembly
  JOURNAL   PLoS One 15 (11), e0236533 (2020)
   PUBMED   33166284
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5073687)
  AUTHORS   Gu,C.H., Zhao,C. and Bushman,F.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-MAR-2020) Microbiology, University of Pennsylvania,
            425 Johnson Pavilion 3610 Hamilton Walk, Philadelphia, PA 19146,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAAOOV000000000.1.
            The Mycobacteroides chelonae whole genome shotgun (WGS) project has
            the project accession NZ_JAAOOV000000000.  This version of the
            project (01) has the accession number NZ_JAAOOV010000000, and
            consists of sequences JAAOOV010000001-JAAOOV010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2019
            Assembly Method        :: Unicycler v. 0.4.8-beta
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Illumina 50x; Nanopore 90x
            Sequencing Technology  :: Illumina HiSeq; Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_015700835.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:46:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,015
            CDSs (total)                      :: 4,960
            Genes (coding)                    :: 4,911
            CDSs (with protein)               :: 4,911
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 19 of 49
            Pseudo Genes (incomplete)         :: 28 of 49
            Pseudo Genes (internal stop)      :: 6 of 49
            Pseudo Genes (multiple problems)  :: 2 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5073687
                     /organism="Mycobacteroides chelonae"
                     /mol_type="genomic DNA"
                     /strain="Myco2b"
                     /isolation_source="patient"
                     /host="Homo sapiens"
                     /db_xref="taxon:1774"
                     /geo_loc_name="USA: Philadelphia"
                     /lat_lon="39.9500 N 75.1938 W"
                     /collection_date="2017"
                     /collected_by="HUP"
WGS         JAAOOV010000001-JAAOOV010000002
WGS_SCAFLD  NZ_JAAOOV010000001-NZ_JAAOOV010000002
//
LOCUS       NZ_JBLWAL010000000    816880 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mycoplasma milvi strain VS410B, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBLWAL000000000
VERSION     NZ_JBLWAL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN46902134
            Assembly: GCF_048284735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mycoplasma milvi
  ORGANISM  Mycoplasma milvi
            Bacteria; Bacillati; Mycoplasmatota; Mollicutes; Mycoplasmataceae;
            Mycoplasma.
REFERENCE   1  (bases 1 to 816880)
  AUTHORS   Spergser,J.
  TITLE     Whole genome sequences of novel Mycoplasma spp. isolated from birds
            of prey
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 816880)
  AUTHORS   Spergser,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-FEB-2025) Centre of Pathobiology, Institute of
            Microbiology, Veterinaerplatz 1, Vienna 1210, Austria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBLWAL000000000.1.
            The Mycoplasma milvi whole genome shotgun (WGS) project has the
            project accession NZ_JBLWAL000000000.  This version of the project
            (01) has the accession number NZ_JBLWAL010000000, and consists of
            sequences JBLWAL010000001-JBLWAL010000005.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina MiniSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_048284735.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:29:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 676
            CDSs (total)                      :: 639
            Genes (coding)                    :: 636
            CDSs (with protein)               :: 636
            Genes (RNA)                       :: 37
            rRNAs                             :: 3 (5S)
            complete rRNAs                    :: 3 (5S)
            tRNAs                             :: 31
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 1 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 0 of 3
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..816880
                     /organism="Mycoplasma milvi"
                     /mol_type="genomic DNA"
                     /strain="VS410B"
                     /host="Accipiter gentilis"
                     /db_xref="taxon:3398775"
                     /geo_loc_name="Austria"
                     /collection_date="2022"
WGS         JBLWAL010000001-JBLWAL010000005
WGS_SCAFLD  NZ_JBLWAL010000001-NZ_JBLWAL010000005
//
LOCUS       NZ_JBSWZS010000000   1298485 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mycoplasma pogonae strain L2313072, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSWZS000000000
VERSION     NZ_JBSWZS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53362816
            Assembly: GCF_054170725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mycoplasma pogonae
  ORGANISM  Mycoplasma pogonae
            Bacteria; Bacillati; Mycoplasmatota; Mollicutes; Mycoplasmataceae;
            Mycoplasma.
REFERENCE   1  (bases 1 to 1298485)
  AUTHORS   Plangsangmas,T., Burne,A., De Luca,E., Sasaki,E., Menk Pinto
            Lima,J.C., Konopka,K., Brown,M.B. and Nevarez,J.G.
  TITLE     Molecular Characterization and Clinicopathological Findings of
            Mycoplasma pogonae Infection in Captive Central Bearded Dragons
            (Pogona vitticeps)
  JOURNAL   Animals (Basel) 16 (1), 48 (2025)
   PUBMED   41514736
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1298485)
  AUTHORS   Brown,M.B., Burne,A.M., Plangsangmas,T., Nevarez,J.G. and
            Konopka,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2025) Infectious Diseases and Immunology,
            University of Florida, PO Box 110880, Gainesville, FL 32611-0880,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSWZS000000000.1.
            The Mycoplasma pogonae whole genome shotgun (WGS) project has the
            project accession NZ_JBSWZS000000000.  This version of the project
            (01) has the accession number NZ_JBSWZS010000000, and consists of
            sequences JBSWZS010000001-JBSWZS010000026.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from M.B. Brown, Dept Infectious
            Diseases & Immunology, College of Veterinary Medicine, University
            of Florida, Gainesville, FL 32611-0880.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2023
            Assembly Method        :: Unicycler v. 5.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 360.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_054170725.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:13:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 991
            CDSs (total)                      :: 956
            Genes (coding)                    :: 951
            CDSs (with protein)               :: 951
            Genes (RNA)                       :: 35
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 28
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 5
            CDSs (without protein)            :: 5
            Pseudo Genes (ambiguous residues) :: 0 of 5
            Pseudo Genes (frameshifted)       :: 1 of 5
            Pseudo Genes (incomplete)         :: 5 of 5
            Pseudo Genes (internal stop)      :: 0 of 5
            Pseudo Genes (multiple problems)  :: 1 of 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1298485
                     /organism="Mycoplasma pogonae"
                     /mol_type="genomic DNA"
                     /strain="L2313072"
                     /isolation_source="lung"
                     /host="Pogona vitticeps"
                     /type_material="type strain of Mycoplasma pogonae"
                     /db_xref="taxon:3472838"
                     /geo_loc_name="USA: Baton Rouge, LA"
                     /collection_date="2023-08-19"
                     /collected_by="Department of Veterinary Clinical Sciences
                     and Animal Disease Diagnostic Laboratory, Louisiana State
                     University School of Veterinary Medicine"
WGS         JBSWZS010000001-JBSWZS010000026
WGS_SCAFLD  NZ_JBSWZS010000001-NZ_JBSWZS010000026
//
LOCUS       NZ_JBWBWK010000000   8354622 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mesorhizobium sp. RCAM 06350, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWBWK000000000
VERSION     NZ_JBWBWK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN55412802
            Assembly: GCF_056174625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mesorhizobium sp. RCAM 06350
  ORGANISM  Mesorhizobium sp. RCAM 06350
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (bases 1 to 8354622)
  AUTHORS   Guro,P., Kuznetsova,I., Sazanova,A., Chernikova,N., Karlov,D.,
            Belimov,A. and Safronova,V.
  TITLE     Description of novel Mesorhizobium species isolated from legume
            root nodules in Arctic and subarctic regions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8354622)
  AUTHORS   Guro,P., Kuznetsova,I., Sazanova,A. and Safronova,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2026) Russian Collection of Agricultural
            Microorganisms, All-Russia Research Institute for Agricultural
            Microbiology, Podbelsky chausse 3, Saint-Petersburg, Pushkin 8
            196608, Russia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBWK000000000.1.
            The Mesorhizobium sp. RCAM 06350 whole genome shotgun (WGS) project
            has the project accession NZ_JBWBWK000000000.  This version of the
            project (01) has the accession number NZ_JBWBWK010000000, and
            consists of sequences JBWBWK010000001-JBWBWK010000003.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Bacteria and source DNA
            available from Bacteria and source DNA available from Russian
            Collection of Agricultural Microorganisms RCAM 06350.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2026
            Assembly Method        :: Trycycler v. v. 0.5.4
            Assembly Name          :: 9_4-1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 56.7x
            Sequencing Technology  :: Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056174625.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 19:27:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 8,316
            CDSs (total)                      :: 8,255
            Genes (coding)                    :: 7,377
            CDSs (with protein)               :: 7,377
            Genes (RNA)                       :: 61
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 878
            CDSs (without protein)            :: 878
            Pseudo Genes (ambiguous residues) :: 0 of 878
            Pseudo Genes (frameshifted)       :: 683 of 878
            Pseudo Genes (incomplete)         :: 283 of 878
            Pseudo Genes (internal stop)      :: 23 of 878
            Pseudo Genes (multiple problems)  :: 102 of 878
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8354622
                     /organism="Mesorhizobium sp. RCAM 06350"
                     /mol_type="genomic DNA"
                     /strain="RCAM 06350"
                     /isolation_source="root nodule"
                     /host="Oxytropis arctica subsp. taimyrensis"
                     /db_xref="taxon:3687474"
                     /geo_loc_name="Russia: Republic of Sakha (Yakutia)"
                     /collection_date="2021"
WGS         JBWBWK010000001-JBWBWK010000003
WGS_SCAFLD  NZ_CM149692
WGS_SCAFLD  NZ_JBWBWK010000002-NZ_JBWBWK010000003
//
LOCUS       NZ_JACCAB010000000   3386878 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pedococcus badiiscoriae strain DSM 23987, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JACCAB000000000
VERSION     NZ_JACCAB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN05878022
            Assembly: GCF_013408925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pedococcus badiiscoriae
  ORGANISM  Pedococcus badiiscoriae
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Intrasporangiaceae; Pedococcus.
REFERENCE   1  (bases 1 to 3386878)
  AUTHORS   Klenk,H.-P.
  TITLE     Sequencing the genomes of 1000 actinobacteria strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3386878)
  AUTHORS   Klenk,H.-P., Huntemann,M., Clum,A., Spunde,A., Palaniappan,K.,
            Ritter,S., Mikhailova,N., Chen,I.-M., Stamatis,D., Reddy,T.,
            O'Malley,R., Daum,C., Shapiro,N., Ivanova,N., Kyrpides,N. and
            Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUL-2020) Prokaryote Super Program, DOE Joint Genome
            Institute, 1 Cyclotron Road, Mail Stop: 91R0183, Berkeley, CA
            94720, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JACCAB000000000.1.
            The Pedococcus badiiscoriae whole genome shotgun (WGS) project has
            the project accession NZ_JACCAB000000000.  This version of the
            project (01) has the accession number NZ_JACCAB010000000, and
            consists of sequence JACCAB010000001.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: HGAP v. smrtlink/7.0.1.66768, HGAP 4
                                      (0.2.1)
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 1096.0x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013408925.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:26:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,215
            CDSs (total)                      :: 3,163
            Genes (coding)                    :: 3,150
            CDSs (with protein)               :: 3,150
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 13
            CDSs (without protein)            :: 13
            Pseudo Genes (ambiguous residues) :: 0 of 13
            Pseudo Genes (frameshifted)       :: 0 of 13
            Pseudo Genes (incomplete)         :: 13 of 13
            Pseudo Genes (internal stop)      :: 0 of 13
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3386878
                     /organism="Pedococcus badiiscoriae"
                     /mol_type="genomic DNA"
                     /strain="DSM 23987"
                     /culture_collection="DSM:23987"
                     /type_material="type strain of Phycicoccus badiiscoriae"
                     /db_xref="taxon:642776"
WGS         JACCAB010000001
WGS_SCAFLD  NZ_JACCAB010000001
//
LOCUS       NZ_JAXCWM010000000   5989400 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Massilia sp. CFBP9012, whole genome shotgun sequencing project.
ACCESSION   NZ_JAXCWM000000000
VERSION     NZ_JAXCWM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN38288757
            Assembly: GCF_034045115.1
KEYWORDS    WGS; RefSeq.
SOURCE      Massilia sp. CFBP9012
  ORGANISM  Massilia sp. CFBP9012
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Oxalobacteraceae; Telluria group; Massilia.
REFERENCE   1  (bases 1 to 5989400)
  AUTHORS   Arnault,G., Marais,C., Preveaux,A., Briand,M., Poisson,A.S.,
            Sarniguet,A., Barret,M. and Simonin,M.
  TITLE     Seedling microbiota engineering using bacterial synthetic community
            inoculation on seeds
  JOURNAL   FEMS Microbiol Ecol 100 (4) (2024)
   PUBMED   38503562
  REMARK    Erratum:[FEMS Microbiol Ecol. 2024 May 14;100(6):fiae065. doi:
            10.1093/femsec/fiae065. PMID: 38748655]
REFERENCE   2  (bases 1 to 5989400)
  AUTHORS   Arnault,G., Marais,C., Preveaux,A., Briand,M., Poisson,A.S.,
            Sarniguet,A., Barret,M. and Simonin,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2023) SPE, INRAE, rue Georges Morel, Beaucouze
            49071, France
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAXCWM000000000.1.
            The Massilia sp. CFBP9012 whole genome shotgun (WGS) project has
            the project accession NZ_JAXCWM000000000.  This version of the
            project (01) has the accession number NZ_JAXCWM010000000, and
            consists of sequences JAXCWM010000001-JAXCWM010000037.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: JAN-2022
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200.344726492718x
            Sequencing Technology  :: DNBseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_034045115.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:53:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,296
            CDSs (total)                      :: 5,214
            Genes (coding)                    :: 5,177
            CDSs (with protein)               :: 5,177
            Genes (RNA)                       :: 82
            rRNAs                             :: 6, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 1 (5S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 37
            CDSs (without protein)            :: 37
            Pseudo Genes (ambiguous residues) :: 0 of 37
            Pseudo Genes (frameshifted)       :: 6 of 37
            Pseudo Genes (incomplete)         :: 31 of 37
            Pseudo Genes (internal stop)      :: 5 of 37
            Pseudo Genes (multiple problems)  :: 4 of 37
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5989400
                     /organism="Massilia sp. CFBP9012"
                     /mol_type="genomic DNA"
                     /strain="CFBP9012"
                     /isolation_source="seedling"
                     /host="Phaseolus vulgaris"
                     /culture_collection="CIRM-CFBP:CFBP9012"
                     /db_xref="taxon:3096531"
                     /geo_loc_name="France: Brain sur l'Authion,
                     Maine-et-Loire"
                     /collection_date="2021-01"
                     /genotype="Flavert"
WGS         JAXCWM010000001-JAXCWM010000037
WGS_SCAFLD  NZ_JAXCWM010000001-NZ_JAXCWM010000037
//
LOCUS       NZ_VHPZ01000000      6487040 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mycolicibacterium fortuitum strain MTB7, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VHPZ00000000
VERSION     NZ_VHPZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12135350
            Assembly: GCF_006517415.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mycolicibacterium fortuitum (Mycobacterium fortuitum)
  ORGANISM  Mycolicibacterium fortuitum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
REFERENCE   1  (bases 1 to 6487040)
  AUTHORS   Laamarti,M., El Mrimar,N., Kartti,S., Alouane,T., Bakri,W.,
            Mourchid,R., Belouad,E., Bssaibis,F., Zegmout,A., El Jaoudi,R.,
            Maleb,A., Abid,A., Lemnouer,A., Dakka,T., Elouennass,M. and
            Ibrahimi,A.
  TITLE     Lemnouer,A., Dakka,T., Elouennass,M. and Ibrahimi,A
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6487040)
  AUTHORS   Laamarti,M., El Mrimar,N., Kartti,S., Alouane,T., Bakri,W.,
            Mourchid,R., Belouad,E., Bssaibis,F., Zegmout,A., El Jaoudi,R.,
            Maleb,A., Abid,A., Lemnouer,A., Dakka,T., Elouennass,M. and
            Ibrahimi,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-JUN-2019) Biotechnologie, Medbiotech Laboratory,
            Faculty of Medicine and Pharmacy, Rabat/ Mohamed V University
            Rabat, Mohamed Belarbi El Alaoui, Rabat 6203, Morocco
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VHPZ00000000.1.
            The Mycolicibacterium fortuitum whole genome shotgun (WGS) project
            has the project accession NZ_VHPZ00000000.  This version of the
            project (01) has the accession number NZ_VHPZ01000000, and consists
            of sequences VHPZ01000001-VHPZ01000212.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: A5 miseq v. 20160825
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 120.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_006517415.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:41:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,472
            CDSs (total)                      :: 6,403
            Genes (coding)                    :: 6,228
            CDSs (with protein)               :: 6,228
            Genes (RNA)                       :: 69
            rRNAs                             :: 2, 5, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 175
            CDSs (without protein)            :: 175
            Pseudo Genes (ambiguous residues) :: 0 of 175
            Pseudo Genes (frameshifted)       :: 45 of 175
            Pseudo Genes (incomplete)         :: 136 of 175
            Pseudo Genes (internal stop)      :: 6 of 175
            Pseudo Genes (multiple problems)  :: 10 of 175
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6487040
                     /organism="Mycolicibacterium fortuitum"
                     /mol_type="genomic DNA"
                     /strain="MTB7"
                     /isolation_source="sputum culture"
                     /host="Homo sapiens"
                     /db_xref="taxon:1766"
                     /geo_loc_name="Morocco: Rabat"
                     /lat_lon="34.00 N 6.49 W"
                     /collection_date="2016-08-11"
                     /collected_by="Hopital Militaire d Instruction Mohammed V"
WGS         VHPZ01000001-VHPZ01000212
WGS_SCAFLD  NZ_VHPZ01000001-NZ_VHPZ01000212
//
LOCUS       NZ_JBWBTZ010000000   5557342 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudoalteromonas sp. QJM3NY_22, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWBTZ000000000
VERSION     NZ_JBWBTZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449782
            Assembly: GCF_056173065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudoalteromonas sp. QJM3NY_22
  ORGANISM  Pseudoalteromonas sp. QJM3NY_22
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.
REFERENCE   1  (bases 1 to 5557342)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5557342)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBTZ000000000.1.
            The Pseudoalteromonas sp. QJM3NY_22 whole genome shotgun (WGS)
            project has the project accession NZ_JBWBTZ000000000.  This version
            of the project (01) has the accession number NZ_JBWBTZ010000000,
            and consists of sequences JBWBTZ010000001-JBWBTZ010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 227.5x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173065.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 19:15:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,125
            CDSs (total)                      :: 4,988
            Genes (coding)                    :: 4,656
            CDSs (with protein)               :: 4,656
            Genes (RNA)                       :: 137
            rRNAs                             :: 10, 9, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 10, 9, 9 (5S, 16S, 23S)
            tRNAs                             :: 105
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 332
            CDSs (without protein)            :: 332
            Pseudo Genes (ambiguous residues) :: 0 of 332
            Pseudo Genes (frameshifted)       :: 97 of 332
            Pseudo Genes (incomplete)         :: 230 of 332
            Pseudo Genes (internal stop)      :: 47 of 332
            Pseudo Genes (multiple problems)  :: 36 of 332
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5557342
                     /organism="Pseudoalteromonas sp. QJM3NY_22"
                     /mol_type="genomic DNA"
                     /strain="QJM3NY_22"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569841"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBTZ010000001-JBWBTZ010000004
WGS_SCAFLD  NZ_CM149655
WGS_SCAFLD  NZ_JBWBTZ010000002-NZ_JBWBTZ010000004
//
LOCUS       NZ_DASPLO010000000   4878721 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Methylocaldum sp. isolate SMAG_U12066, whole genome shotgun
            sequencing project.
ACCESSION   NZ_DASPLO000000000
VERSION     NZ_DASPLO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37944987
            Sequence Read Archive: SRR7003767
            Assembly: GCF_035627495.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq; TPA:assembly.
SOURCE      Methylocaldum sp. (soil metagenome)
  ORGANISM  Methylocaldum sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Methylococcales; Methylococcaceae; Methylocaldum.
REFERENCE   1  (bases 1 to 4878721)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. doi:
            10.1038/s41467-023-44072-7. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4878721)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            DASPLO000000000.1.
            The Methylocaldum sp. whole genome shotgun (WGS) project has the
            project accession NZ_DASPLO000000000.  This version of the project
            (01) has the accession number NZ_DASPLO010000000, and consists of
            sequences DASPLO010000001-DASPLO010000226.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_035627495.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:41:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,625
            CDSs (total)                      :: 4,561
            Genes (coding)                    :: 4,450
            CDSs (with protein)               :: 4,450
            Genes (RNA)                       :: 64
            rRNAs                             :: 1, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 3 (16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 18 of 111
            Pseudo Genes (incomplete)         :: 98 of 111
            Pseudo Genes (internal stop)      :: 7 of 111
            Pseudo Genes (multiple problems)  :: 11 of 111
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4878721
                     /organism="Methylocaldum sp."
                     /mol_type="genomic DNA"
                     /isolate="SMAG_U12066"
                     /isolation_source="soil"
                     /db_xref="taxon:1969727"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="33.3 N 116.25 W"
                     /metagenome_source="soil metagenome"
                     /metagenomic
WGS         DASPLO010000001-DASPLO010000226
WGS_SCAFLD  NZ_DASPLO010000001-NZ_DASPLO010000226
//
LOCUS       NZ_VAHQ01000000      2520411 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mannheimia haemolytica strain UGA-A3-56-1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VAHQ00000000
VERSION     NZ_VAHQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10847978
            Assembly: GCF_007003885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2520411)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Genetic characterization of susceptible and multi-drug resistant
            Mannheimia haemolytica isolated from high-risk stocker calves prior
            to and after antimicrobial metaphylaxis
  JOURNAL   Vet Microbiol 235, 110-117 (2019)
   PUBMED   31282368
REFERENCE   2  (bases 1 to 2520411)
  AUTHORS   Snyder,E.R., Alvarez-Narvaez,S. and Credille,B.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-MAY-2019) POPH, Food Animal Health and Mangement
            Program, University of Georgia, 2200 College Station Road, Athens,
            GA 30602, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VAHQ00000000.1.
            The Mannheimia haemolytica whole genome shotgun (WGS) project has
            the project accession NZ_VAHQ00000000.  This version of the project
            (01) has the accession number NZ_VAHQ01000000, and consists of
            sequences VAHQ01000001-VAHQ01000151.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 19-JUN-2017
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 325x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007003885.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:03:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,587
            CDSs (total)                      :: 2,528
            Genes (coding)                    :: 2,436
            CDSs (with protein)               :: 2,436
            Genes (RNA)                       :: 59
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 33 of 92
            Pseudo Genes (incomplete)         :: 52 of 92
            Pseudo Genes (internal stop)      :: 16 of 92
            Pseudo Genes (multiple problems)  :: 8 of 92
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2520411
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /strain="UGA-A3-56-1"
                     /isolation_source="week A3 calf 56 isolate 1"
                     /host="bovine"
                     /db_xref="taxon:75985"
                     /geo_loc_name="USA: Georgia"
                     /collection_date="2016-04-06"
                     /collected_by="Emily R. Snyder"
WGS         VAHQ01000001-VAHQ01000151
WGS_SCAFLD  NZ_VAHQ01000001-NZ_VAHQ01000151
//
LOCUS       NZ_SOMM01000000      6995315 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mycolicibacterium smegmatis strain LZ-K2, whole genome shotgun
            sequencing project.
ACCESSION   NZ_SOMM00000000
VERSION     NZ_SOMM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN10960838
            Assembly: GCF_009764675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mycolicibacterium smegmatis (Mycobacterium smegmatis)
  ORGANISM  Mycolicibacterium smegmatis
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
REFERENCE   1  (bases 1 to 6995315)
  AUTHORS   Zhang,K.
  TITLE     Bioconversion of lignin to microbial lipid by Mycobacterium
            smegmatis LZ-K2 without pretreatment
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6995315)
  AUTHORS   Zhang,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-MAR-2019) The School of Science, Lanzhou University,
            Tianshui South Road, Lanzhou 730000, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            SOMM00000000.1.
            The Mycolicibacterium smegmatis whole genome shotgun (WGS) project
            has the project accession NZ_SOMM00000000.  This version of the
            project (01) has the accession number NZ_SOMM01000000, and consists
            of sequences SOMM01000001-SOMM01000114.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. JAN-2019
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 0.96x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009764675.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:09:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,724
            CDSs (total)                      :: 6,665
            Genes (coding)                    :: 6,559
            CDSs (with protein)               :: 6,559
            Genes (RNA)                       :: 59
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 106
            CDSs (without protein)            :: 106
            Pseudo Genes (ambiguous residues) :: 0 of 106
            Pseudo Genes (frameshifted)       :: 39 of 106
            Pseudo Genes (incomplete)         :: 68 of 106
            Pseudo Genes (internal stop)      :: 6 of 106
            Pseudo Genes (multiple problems)  :: 7 of 106
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6995315
                     /organism="Mycolicibacterium smegmatis"
                     /mol_type="genomic DNA"
                     /strain="LZ-K2"
                     /isolation_source="Rotten wood"
                     /db_xref="taxon:1772"
                     /geo_loc_name="China: Lanzhou"
                     /collection_date="2016-09-27"
WGS         SOMM01000001-SOMM01000114
WGS_SCAFLD  NZ_SOMM01000001-NZ_SOMM01000114
//
LOCUS       NZ_DATJPU010000000   6087422 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Mycobacterium sp. isolate SMAG_U14921, whole genome shotgun
            sequencing project.
ACCESSION   NZ_DATJPU000000000
VERSION     NZ_DATJPU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37942275
            Sequence Read Archive: SRR8879134
            Assembly: GCF_035506235.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq; TPA:assembly.
SOURCE      Mycobacterium sp. (soil metagenome)
  ORGANISM  Mycobacterium sp.
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycobacterium.
REFERENCE   1  (bases 1 to 6087422)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. doi:
            10.1038/s41467-023-44072-7. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6087422)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            DATJPU000000000.1.
            The Mycobacterium sp. whole genome shotgun (WGS) project has the
            project accession NZ_DATJPU000000000.  This version of the project
            (01) has the accession number NZ_DATJPU010000000, and consists of
            sequences DATJPU010000001-DATJPU010000322.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_035506235.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:15:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,965
            CDSs (total)                      :: 5,920
            Genes (coding)                    :: 5,584
            CDSs (with protein)               :: 5,584
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 336
            CDSs (without protein)            :: 336
            Pseudo Genes (ambiguous residues) :: 0 of 336
            Pseudo Genes (frameshifted)       :: 95 of 336
            Pseudo Genes (incomplete)         :: 270 of 336
            Pseudo Genes (internal stop)      :: 13 of 336
            Pseudo Genes (multiple problems)  :: 40 of 336
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6087422
                     /organism="Mycobacterium sp."
                     /mol_type="genomic DNA"
                     /isolate="SMAG_U14921"
                     /isolation_source="soil"
                     /db_xref="taxon:1785"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="26.5008 N 80.2398 W"
                     /metagenome_source="soil metagenome"
                     /metagenomic
WGS         DATJPU010000001-DATJPU010000322
WGS_SCAFLD  NZ_DATJPU010000001-NZ_DATJPU010000322
//
LOCUS       NZ_JBWBUG010000000   7873323 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pristimantibacillus sp. Z349TD_6, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWBUG000000000
VERSION     NZ_JBWBUG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449775
            Assembly: GCF_056173205.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pristimantibacillus sp. Z349TD_6
  ORGANISM  Pristimantibacillus sp. Z349TD_6
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Pristimantibacillus (SeqCode).
REFERENCE   1  (bases 1 to 7873323)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7873323)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBUG000000000.1.
            The Pristimantibacillus sp. Z349TD_6 whole genome shotgun (WGS)
            project has the project accession NZ_JBWBUG000000000.  This version
            of the project (01) has the accession number NZ_JBWBUG010000000,
            and consists of sequence JBWBUG010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 130.6x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173205.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 18:02:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,836
            CDSs (total)                      :: 6,707
            Genes (coding)                    :: 6,641
            CDSs (with protein)               :: 6,641
            Genes (RNA)                       :: 129
            rRNAs                             :: 12, 12, 12 (5S, 16S, 23S)
            complete rRNAs                    :: 12, 12, 12 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 66
            CDSs (without protein)            :: 66
            Pseudo Genes (ambiguous residues) :: 0 of 66
            Pseudo Genes (frameshifted)       :: 23 of 66
            Pseudo Genes (incomplete)         :: 54 of 66
            Pseudo Genes (internal stop)      :: 10 of 66
            Pseudo Genes (multiple problems)  :: 18 of 66
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7873323
                     /organism="Pristimantibacillus sp. Z349TD_6"
                     /mol_type="genomic DNA"
                     /strain="Z349TD_6"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569858"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBUG010000001
WGS_SCAFLD  NZ_CM149662
//
LOCUS       NZ_JBWBUV010000000   5447608 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Marinomonas sp. 63XJN7_9_ISO-PGPR-S23-217, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBWBUV000000000
VERSION     NZ_JBWBUV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449758
            Assembly: GCF_056173515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Marinomonas sp. 63XJN7_9_ISO-PGPR-S23-217
  ORGANISM  Marinomonas sp. 63XJN7_9_ISO-PGPR-S23-217
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Oceanospirillaceae; Marinomonas.
REFERENCE   1  (bases 1 to 5447608)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5447608)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBUV000000000.1.
            The Marinomonas sp. 63XJN7_9_ISO-PGPR-S23-217 whole genome shotgun
            (WGS) project has the project accession NZ_JBWBUV000000000.  This
            version of the project (01) has the accession number
            NZ_JBWBUV010000000, and consists of sequence JBWBUV010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 154.3x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173515.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:48:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,062
            CDSs (total)                      :: 4,946
            Genes (coding)                    :: 4,889
            CDSs (with protein)               :: 4,889
            Genes (RNA)                       :: 116
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 57
            CDSs (without protein)            :: 57
            Pseudo Genes (ambiguous residues) :: 0 of 57
            Pseudo Genes (frameshifted)       :: 17 of 57
            Pseudo Genes (incomplete)         :: 47 of 57
            Pseudo Genes (internal stop)      :: 6 of 57
            Pseudo Genes (multiple problems)  :: 11 of 57
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5447608
                     /organism="Marinomonas sp. 63XJN7_9_ISO-PGPR-S23-217"
                     /mol_type="genomic DNA"
                     /strain="63XJN7_9_ISO-PGPR-S23-217"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569818"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBUV010000001
WGS_SCAFLD  NZ_CM149678
//
LOCUS       NZ_JBWBUW010000000   5199265 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Marinomonas sp. 63XJN7_7_ISO-PGPR-S23-202, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBWBUW000000000
VERSION     NZ_JBWBUW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449757
            Assembly: GCF_056173505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Marinomonas sp. 63XJN7_7_ISO-PGPR-S23-202
  ORGANISM  Marinomonas sp. 63XJN7_7_ISO-PGPR-S23-202
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Oceanospirillaceae; Marinomonas.
REFERENCE   1  (bases 1 to 5199265)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5199265)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBUW000000000.1.
            The Marinomonas sp. 63XJN7_7_ISO-PGPR-S23-202 whole genome shotgun
            (WGS) project has the project accession NZ_JBWBUW000000000.  This
            version of the project (01) has the accession number
            NZ_JBWBUW010000000, and consists of sequence JBWBUW010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 293.2x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173505.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:49:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,781
            CDSs (total)                      :: 4,668
            Genes (coding)                    :: 4,613
            CDSs (with protein)               :: 4,613
            Genes (RNA)                       :: 113
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 55
            CDSs (without protein)            :: 55
            Pseudo Genes (ambiguous residues) :: 0 of 55
            Pseudo Genes (frameshifted)       :: 15 of 55
            Pseudo Genes (incomplete)         :: 40 of 55
            Pseudo Genes (internal stop)      :: 9 of 55
            Pseudo Genes (multiple problems)  :: 9 of 55
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5199265
                     /organism="Marinomonas sp. 63XJN7_7_ISO-PGPR-S23-202"
                     /mol_type="genomic DNA"
                     /strain="63XJN7_7_ISO-PGPR-S23-202"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569817"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBUW010000001
WGS_SCAFLD  NZ_CM149677
//
LOCUS       NZ_JAANOW010000000   6408998 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mycolicibacterium fluoranthenivorans strain DSM 44556, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JAANOW000000000
VERSION     NZ_JAANOW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12024888
            Assembly: GCF_011758805.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mycolicibacterium fluoranthenivorans (Mycobacterium
            fluoranthenivorans)
  ORGANISM  Mycolicibacterium fluoranthenivorans
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Mycobacteriales; Mycobacteriaceae; Mycolicibacterium.
REFERENCE   1  (bases 1 to 6408998)
  AUTHORS   Klenk,H.-P.
  TITLE     Sequencing the genomes of 1000 actinobacteria strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6408998)
  AUTHORS   Klenk,H.-P., Huntemann,M., Clum,A., Spunde,A., Palaniappan,K.,
            Ritter,S., Mikhailova,N., Chen,I.-M., Stamatis,D., Reddy,T.,
            O'Malley,R., Daum,C., Shapiro,N., Ivanova,N., Kyrpides,N. and
            Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-MAR-2020) Prokaryote Super Program, DOE Joint Genome
            Institute, 1 Cyclotron Road, Mail Stop: 91R0183, Berkeley, CA
            94720, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAANOW000000000.1.
            The Mycolicibacterium fluoranthenivorans whole genome shotgun (WGS)
            project has the project accession NZ_JAANOW000000000.  This version
            of the project (01) has the accession number NZ_JAANOW010000000,
            and consists of sequences JAANOW010000001-JAANOW010000006.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: HGAP v. smrtlink/6.0.0.47835, HGAP 4
                                      (0.2.1)
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 313.0x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_011758805.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:57:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,281
            CDSs (total)                      :: 6,223
            Genes (coding)                    :: 6,134
            CDSs (with protein)               :: 6,134
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 3, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 89
            CDSs (without protein)            :: 89
            Pseudo Genes (ambiguous residues) :: 0 of 89
            Pseudo Genes (frameshifted)       :: 25 of 89
            Pseudo Genes (incomplete)         :: 66 of 89
            Pseudo Genes (internal stop)      :: 6 of 89
            Pseudo Genes (multiple problems)  :: 7 of 89
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6408998
                     /organism="Mycolicibacterium fluoranthenivorans"
                     /mol_type="genomic DNA"
                     /strain="DSM 44556"
                     /culture_collection="DSM:44556"
                     /type_material="type strain of Mycobacterium
                     fluoranthenivorans"
                     /db_xref="taxon:258505"
                     /geo_loc_name="Germany"
WGS         JAANOW010000001-JAANOW010000006
WGS_SCAFLD  NZ_JAANOW010000001-NZ_JAANOW010000006
//
LOCUS       NZ_JBWBTV010000000   2643155 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Micrococcus sp. iso_26, whole genome shotgun sequencing project.
ACCESSION   NZ_JBWBTV000000000
VERSION     NZ_JBWBTV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449794
            Assembly: GCF_056172975.1
KEYWORDS    WGS; RefSeq.
SOURCE      Micrococcus sp. iso_26
  ORGANISM  Micrococcus sp. iso_26
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Micrococcus.
REFERENCE   1  (bases 1 to 2643155)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2643155)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBTV000000000.1.
            The Micrococcus sp. iso_26 whole genome shotgun (WGS) project has
            the project accession NZ_JBWBTV000000000.  This version of the
            project (01) has the accession number NZ_JBWBTV010000000, and
            consists of sequences JBWBTV010000001-JBWBTV010000039.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 320x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172975.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:52:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,491
            CDSs (total)                      :: 2,434
            Genes (coding)                    :: 2,386
            CDSs (with protein)               :: 2,386
            Genes (RNA)                       :: 57
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 48
            CDSs (without protein)            :: 48
            Pseudo Genes (ambiguous residues) :: 0 of 48
            Pseudo Genes (frameshifted)       :: 13 of 48
            Pseudo Genes (incomplete)         :: 42 of 48
            Pseudo Genes (internal stop)      :: 4 of 48
            Pseudo Genes (multiple problems)  :: 10 of 48
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2643155
                     /organism="Micrococcus sp. iso_26"
                     /mol_type="genomic DNA"
                     /strain="iso_26"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569853"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBTV010000001-JBWBTV010000039
WGS_SCAFLD  NZ_CM149652
WGS_SCAFLD  NZ_JBWBTV010000002-NZ_JBWBTV010000039
//
LOCUS       NZ_JAZAPZ010000000   4393133 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Providencia rettgeri strain KZN406, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAZAPZ000000000
VERSION     NZ_JAZAPZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN38924561
            Assembly: GCF_037447815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Providencia rettgeri
  ORGANISM  Providencia rettgeri
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Providencia.
REFERENCE   1  (bases 1 to 4393133)
  AUTHORS   Ramessar,K., Kumar,A. and Olaniran,A.O.
  TITLE     Whole Genome Sequence of Vibrio spp. Isolated from Treated
            Wastewater Effluent and Receiving Surface Waters
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4393133)
  AUTHORS   Ramessar,K., Kumar,A. and Olaniran,A.O.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-DEC-2023) Microbiology, University of KwaZulu Natal,
            University Road, Durban, KwaZulu-Natal 4091, South Africa
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAZAPZ000000000.1.
            The Providencia rettgeri whole genome shotgun (WGS) project has the
            project accession NZ_JAZAPZ000000000.  This version of the project
            (01) has the accession number NZ_JAZAPZ010000000, and consists of
            sequences JAZAPZ010000001-JAZAPZ010000006.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 14-DEC-2023
            Assembly Method        :: CLC NGS Cell v. 23.0.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037447815.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:35:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,029
            CDSs (total)                      :: 3,925
            Genes (coding)                    :: 3,881
            CDSs (with protein)               :: 3,881
            Genes (RNA)                       :: 104
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 44
            CDSs (without protein)            :: 44
            Pseudo Genes (ambiguous residues) :: 0 of 44
            Pseudo Genes (frameshifted)       :: 11 of 44
            Pseudo Genes (incomplete)         :: 35 of 44
            Pseudo Genes (internal stop)      :: 8 of 44
            Pseudo Genes (multiple problems)  :: 10 of 44
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4393133
                     /organism="Providencia rettgeri"
                     /mol_type="genomic DNA"
                     /strain="KZN406"
                     /isolation_source="wastewater"
                     /db_xref="taxon:587"
                     /geo_loc_name="South Africa: Durban"
                     /collection_date="2022-12-12"
                     /collected_by="Keri"
WGS         JAZAPZ010000001-JAZAPZ010000006
WGS_SCAFLD  NZ_JAZAPZ010000001-NZ_JAZAPZ010000006
//
LOCUS       NZ_CDULHS010000000   2374772 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Planktomarina temperata isolate MarMAG_070262, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDULHS000000000
VERSION     NZ_CDULHS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120722281
            Assembly: GCF_977533975.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Planktomarina temperata (marine metagenome)
  ORGANISM  Planktomarina temperata
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Planktomarina.
REFERENCE   1  (bases 1 to 2374772)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDULHS000000000.1.
            The Planktomarina temperata whole genome shotgun (WGS) project has
            the project accession NZ_CDULHS000000000.  This version of the
            project (01) has the accession number NZ_CDULHS010000000, and
            consists of sequences CDULHS010000001-CDULHS010000179.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977533975.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 01:30:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,365
            CDSs (total)                      :: 2,344
            Genes (coding)                    :: 2,309
            CDSs (with protein)               :: 2,309
            Genes (RNA)                       :: 21
            tRNAs                             :: 18
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 35
            CDSs (without protein)            :: 35
            Pseudo Genes (ambiguous residues) :: 0 of 35
            Pseudo Genes (frameshifted)       :: 3 of 35
            Pseudo Genes (incomplete)         :: 33 of 35
            Pseudo Genes (internal stop)      :: 0 of 35
            Pseudo Genes (multiple problems)  :: 1 of 35
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2374772
                     /organism="Planktomarina temperata"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_070262"
                     /isolation_source="Helgoland, North Sea, Atlantic Ocean"
                     /db_xref="taxon:1284658"
                     /environmental_sample
                     /geo_loc_name="Atlantic Ocean"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDULHS010000001-CDULHS010000179
WGS_SCAFLD  NZ_CDULHS010000001-NZ_CDULHS010000179
//
LOCUS       NZ_JBWBWJ010000000   8361568 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Mesorhizobium sp. RCAM 04855, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWBWJ000000000
VERSION     NZ_JBWBWJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN55412796
            Assembly: GCF_056174595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Mesorhizobium sp. RCAM 04855
  ORGANISM  Mesorhizobium sp. RCAM 04855
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Phyllobacteriaceae; Mesorhizobium.
REFERENCE   1  (bases 1 to 8361568)
  AUTHORS   Guro,P., Kuznetsova,I., Sazanova,A., Chernikova,N., Karlov,D.,
            Belimov,A. and Safronova,V.
  TITLE     Description of novel Mesorhizobium species isolated from legume
            root nodules in Arctic and subarctic regions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8361568)
  AUTHORS   Guro,P., Kuznetsova,I., Sazanova,A. and Safronova,V.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2026) Russian Collection of Agricultural
            Microorganisms, All-Russia Research Institute for Agricultural
            Microbiology, Podbelsky chausse 3, Saint-Petersburg, Pushkin 8
            196608, Russia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBWJ000000000.1.
            The Mesorhizobium sp. RCAM 04855 whole genome shotgun (WGS) project
            has the project accession NZ_JBWBWJ000000000.  This version of the
            project (01) has the accession number NZ_JBWBWJ010000000, and
            consists of sequences JBWBWJ010000001-JBWBWJ010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Bacteria and source DNA
            available from Bacteria and source DNA available from Russian
            Collection of Agricultural Microorganisms RCAM 04855.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2026
            Assembly Method        :: Trycycler v. v. 0.5.4
            Assembly Name          :: 650
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 78.5x
            Sequencing Technology  :: Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056174595.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 18:49:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 8,210
            CDSs (total)                      :: 8,145
            Genes (coding)                    :: 7,564
            CDSs (with protein)               :: 7,564
            Genes (RNA)                       :: 65
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 581
            CDSs (without protein)            :: 581
            Pseudo Genes (ambiguous residues) :: 0 of 581
            Pseudo Genes (frameshifted)       :: 456 of 581
            Pseudo Genes (incomplete)         :: 181 of 581
            Pseudo Genes (internal stop)      :: 21 of 581
            Pseudo Genes (multiple problems)  :: 74 of 581
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8361568
                     /organism="Mesorhizobium sp. RCAM 04855"
                     /mol_type="genomic DNA"
                     /strain="RCAM 04855"
                     /isolation_source="root nodule"
                     /host="Oxytropis anadyrensis"
                     /db_xref="taxon:3687473"
                     /geo_loc_name="Russia: Kamchatka Peninsula"
                     /collection_date="2018"
WGS         JBWBWJ010000001-JBWBWJ010000002
WGS_SCAFLD  NZ_CM149690
WGS_SCAFLD  NZ_JBWBWJ010000002
//
LOCUS       NZ_JBWBUU010000000   5199651 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Marinomonas sp. iso_103, whole genome shotgun sequencing project.
ACCESSION   NZ_JBWBUU000000000
VERSION     NZ_JBWBUU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449759
            Assembly: GCF_056173485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Marinomonas sp. iso_103
  ORGANISM  Marinomonas sp. iso_103
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Oceanospirillaceae; Marinomonas.
REFERENCE   1  (bases 1 to 5199651)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5199651)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBUU000000000.1.
            The Marinomonas sp. iso_103 whole genome shotgun (WGS) project has
            the project accession NZ_JBWBUU000000000.  This version of the
            project (01) has the accession number NZ_JBWBUU010000000, and
            consists of sequence JBWBUU010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 191.6x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173485.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:48:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,794
            CDSs (total)                      :: 4,681
            Genes (coding)                    :: 4,626
            CDSs (with protein)               :: 4,626
            Genes (RNA)                       :: 113
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 55
            CDSs (without protein)            :: 55
            Pseudo Genes (ambiguous residues) :: 0 of 55
            Pseudo Genes (frameshifted)       :: 14 of 55
            Pseudo Genes (incomplete)         :: 41 of 55
            Pseudo Genes (internal stop)      :: 9 of 55
            Pseudo Genes (multiple problems)  :: 9 of 55
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5199651
                     /organism="Marinomonas sp. iso_103"
                     /mol_type="genomic DNA"
                     /strain="iso_103"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569819"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBUU010000001
WGS_SCAFLD  NZ_CM149676
//
LOCUS       NZ_CDUYFY010000000   2443888 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Planktomarina temperata isolate MarMAG_070354, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDUYFY000000000
VERSION     NZ_CDUYFY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120734855
            Assembly: GCF_977621335.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Planktomarina temperata (marine metagenome)
  ORGANISM  Planktomarina temperata
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Planktomarina.
REFERENCE   1  (bases 1 to 2443888)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDUYFY000000000.1.
            The Planktomarina temperata whole genome shotgun (WGS) project has
            the project accession NZ_CDUYFY000000000.  This version of the
            project (01) has the accession number NZ_CDUYFY010000000, and
            consists of sequences CDUYFY010000001-CDUYFY010000283.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977621335.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 01:34:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,506
            CDSs (total)                      :: 2,482
            Genes (coding)                    :: 2,429
            CDSs (with protein)               :: 2,429
            Genes (RNA)                       :: 24
            tRNAs                             :: 21
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 53
            CDSs (without protein)            :: 53
            Pseudo Genes (ambiguous residues) :: 0 of 53
            Pseudo Genes (frameshifted)       :: 1 of 53
            Pseudo Genes (incomplete)         :: 53 of 53
            Pseudo Genes (internal stop)      :: 0 of 53
            Pseudo Genes (multiple problems)  :: 1 of 53
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2443888
                     /organism="Planktomarina temperata"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_070354"
                     /isolation_source="Helgoland LTER site"
                     /db_xref="taxon:1284658"
                     /environmental_sample
                     /geo_loc_name="Germany"
                     /collection_date="2012-05-31"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDUYFY010000001-CDUYFY010000283
WGS_SCAFLD  NZ_CDUYFY010000001-NZ_CDUYFY010000283
//
LOCUS       NZ_JBWBUN010000000   6522017 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Nocardiopsis sp. iso_237, whole genome shotgun sequencing project.
ACCESSION   NZ_JBWBUN000000000
VERSION     NZ_JBWBUN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449768
            Assembly: GCF_056173345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Nocardiopsis sp. iso_237
  ORGANISM  Nocardiopsis sp. iso_237
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Nocardiopsidaceae; Nocardiopsis.
REFERENCE   1  (bases 1 to 6522017)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6522017)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBUN000000000.1.
            The Nocardiopsis sp. iso_237 whole genome shotgun (WGS) project has
            the project accession NZ_JBWBUN000000000.  This version of the
            project (01) has the accession number NZ_JBWBUN010000000, and
            consists of sequence JBWBUN010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 74.1x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173345.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:54:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,839
            CDSs (total)                      :: 5,764
            Genes (coding)                    :: 5,715
            CDSs (with protein)               :: 5,715
            Genes (RNA)                       :: 75
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 13 of 49
            Pseudo Genes (incomplete)         :: 41 of 49
            Pseudo Genes (internal stop)      :: 2 of 49
            Pseudo Genes (multiple problems)  :: 7 of 49
            CRISPR Arrays                     :: 14
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6522017
                     /organism="Nocardiopsis sp. iso_237"
                     /mol_type="genomic DNA"
                     /strain="iso_237"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569828"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBUN010000001
WGS_SCAFLD  NZ_CM149669
//
LOCUS       NZ_JAIXJA010000000   7164356 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-30, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXJA000000000
VERSION     NZ_JAIXJA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906746
            Assembly: GCF_045795125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7164356)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7164356)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXJA000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXJA000000000.  This version of the
            project (01) has the accession number NZ_JAIXJA010000000, and
            consists of sequences JAIXJA010000001-JAIXJA010000081.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 98x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795125.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:03:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,859
            CDSs (total)                      :: 6,785
            Genes (coding)                    :: 6,691
            CDSs (with protein)               :: 6,691
            Genes (RNA)                       :: 74
            rRNAs                             :: 1, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 95
            CDSs (without protein)            :: 94
            Pseudo Genes (ambiguous residues) :: 0 of 95
            Pseudo Genes (frameshifted)       :: 24 of 95
            Pseudo Genes (incomplete)         :: 73 of 95
            Pseudo Genes (internal stop)      :: 7 of 95
            Pseudo Genes (multiple problems)  :: 8 of 95
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7164356
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-30"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2016"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXJA010000001-JAIXJA010000081
WGS_SCAFLD  NZ_JAIXJA010000001-NZ_JAIXJA010000081
//
LOCUS       NZ_CDVCTW010000000   2346500 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Planktomarina temperata isolate MarMAG_070353, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVCTW000000000
VERSION     NZ_CDVCTW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120734782
            Assembly: GCF_977652075.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Planktomarina temperata (marine metagenome)
  ORGANISM  Planktomarina temperata
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Planktomarina.
REFERENCE   1  (bases 1 to 2346500)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVCTW000000000.1.
            The Planktomarina temperata whole genome shotgun (WGS) project has
            the project accession NZ_CDVCTW000000000.  This version of the
            project (01) has the accession number NZ_CDVCTW010000000, and
            consists of sequences CDVCTW010000001-CDVCTW010000273.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977652075.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 01:22:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,421
            CDSs (total)                      :: 2,400
            Genes (coding)                    :: 2,347
            CDSs (with protein)               :: 2,347
            Genes (RNA)                       :: 21
            tRNAs                             :: 18
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 53
            CDSs (without protein)            :: 53
            Pseudo Genes (ambiguous residues) :: 0 of 53
            Pseudo Genes (frameshifted)       :: 1 of 53
            Pseudo Genes (incomplete)         :: 52 of 53
            Pseudo Genes (internal stop)      :: 0 of 53
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2346500
                     /organism="Planktomarina temperata"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_070353"
                     /isolation_source="Helgoland LTER site"
                     /db_xref="taxon:1284658"
                     /environmental_sample
                     /geo_loc_name="Germany"
                     /collection_date="2012-05-24"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVCTW010000001-CDVCTW010000273
WGS_SCAFLD  NZ_CDVCTW010000001-NZ_CDVCTW010000273
//
LOCUS       NZ_CDVOFQ010000000   3487099 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Modicisalibacter zincidurans isolate MarMAG_114463, whole
            genome shotgun sequencing project.
ACCESSION   NZ_CDVOFQ000000000
VERSION     NZ_CDVOFQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737555
            Assembly: GCF_977729505.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Modicisalibacter zincidurans (marine metagenome)
  ORGANISM  Modicisalibacter zincidurans
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Oceanospirillales; Halomonadaceae; Modicisalibacter.
REFERENCE   1  (bases 1 to 3487099)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVOFQ000000000.1.
            The Modicisalibacter zincidurans whole genome shotgun (WGS) project
            has the project accession NZ_CDVOFQ000000000.  This version of the
            project (01) has the accession number NZ_CDVOFQ010000000, and
            consists of sequences CDVOFQ010000001-CDVOFQ010000074.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977729505.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:22:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,264
            CDSs (total)                      :: 3,208
            Genes (coding)                    :: 3,160
            CDSs (with protein)               :: 3,160
            Genes (RNA)                       :: 56
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 48
            CDSs (without protein)            :: 48
            Pseudo Genes (ambiguous residues) :: 0 of 48
            Pseudo Genes (frameshifted)       :: 9 of 48
            Pseudo Genes (incomplete)         :: 44 of 48
            Pseudo Genes (internal stop)      :: 2 of 48
            Pseudo Genes (multiple problems)  :: 6 of 48
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3487099
                     /organism="Modicisalibacter zincidurans"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_114463"
                     /isolation_source="Mariana Trench, free-living
                     microorganism hadal water (9,600 m)"
                     /db_xref="taxon:1178777"
                     /environmental_sample
                     /geo_loc_name="Pacific Ocean"
                     /collection_date="2016-09-16"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVOFQ010000001-CDVOFQ010000074
WGS_SCAFLD  NZ_CDVOFQ010000001-NZ_CDVOFQ010000074
//
LOCUS       NZ_JAIXJZ010000000   6881416 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-05, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXJZ000000000
VERSION     NZ_JAIXJZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906721
            Assembly: GCF_045795645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6881416)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6881416)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXJZ000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXJZ000000000.  This version of the
            project (01) has the accession number NZ_JAIXJZ010000000, and
            consists of sequences JAIXJZ010000001-JAIXJZ010000167.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 53x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795645.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:08:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,627
            CDSs (total)                      :: 6,558
            Genes (coding)                    :: 6,444
            CDSs (with protein)               :: 6,444
            Genes (RNA)                       :: 69
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 3 (5S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 116
            CDSs (without protein)            :: 114
            Pseudo Genes (ambiguous residues) :: 0 of 116
            Pseudo Genes (frameshifted)       :: 17 of 116
            Pseudo Genes (incomplete)         :: 97 of 116
            Pseudo Genes (internal stop)      :: 7 of 116
            Pseudo Genes (multiple problems)  :: 6 of 116
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6881416
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-05"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2009"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXJZ010000001-JAIXJZ010000167
WGS_SCAFLD  NZ_JAIXJZ010000001-NZ_JAIXJZ010000167
//
LOCUS       NZ_JABCQU010000000   4607929 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Providencia stuartii strain PS901, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JABCQU000000000
VERSION     NZ_JABCQU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14657166
            Assembly: GCF_012956045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Providencia stuartii
  ORGANISM  Providencia stuartii
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Morganellaceae; Providencia.
REFERENCE   1  (bases 1 to 4607929)
  AUTHORS   Lezameta,L., Cuicapuza,D., Davila-Barclay,A., Torres,S.,
            Salvatierra,G., Tsukayama,P. and Tamariz,J.
  TITLE     Draft Genome Sequence of a New Delhi Metallo-beta-Lactamase
            (NDM-1)-Producing Providencia stuartii Strain Isolated in Lima,
            Peru
  JOURNAL   Microbiol Resour Announc 9 (39), e00788-20 (2020)
   PUBMED   32972938
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4607929)
  AUTHORS   Lezameta Abarca,L., Cuicapuza Arteaga,D.B., Davila Barclay,A.,
            Torres Zamudio,S., Salvatierra Rodriguez,G.S., Tsukayama
            Cisneros,P. and Tamariz Ortiz,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-APR-2020) Lima, Universidad Peruana Cayetano Heredia,
            Av. Progresso, El Tambo, Huancayo 12001, Peru
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JABCQU000000000.1.
            The Providencia stuartii whole genome shotgun (WGS) project has the
            project accession NZ_JABCQU000000000.  This version of the project
            (01) has the accession number NZ_JABCQU010000000, and consists of
            sequences JABCQU010000001-JABCQU010000132.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date             :: 12-DEC-2019
            Assembly Method           :: SPAdes v. 3.12.0
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: 588
            Genome Coverage           :: 65.0x
            Sequencing Technology     :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_012956045.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:20:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,447
            CDSs (total)                      :: 4,333
            Genes (coding)                    :: 4,163
            CDSs (with protein)               :: 4,163
            Genes (RNA)                       :: 114
            rRNAs                             :: 9, 10, 16 (5S, 16S, 23S)
            complete rRNAs                    :: 5 (5S)
            partial rRNAs                     :: 4, 10, 16 (5S, 16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 170
            CDSs (without protein)            :: 170
            Pseudo Genes (ambiguous residues) :: 0 of 170
            Pseudo Genes (frameshifted)       :: 55 of 170
            Pseudo Genes (incomplete)         :: 133 of 170
            Pseudo Genes (internal stop)      :: 33 of 170
            Pseudo Genes (multiple problems)  :: 44 of 170
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4607929
                     /organism="Providencia stuartii"
                     /mol_type="genomic DNA"
                     /strain="PS901"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:588"
                     /geo_loc_name="Peru"
                     /lat_lon="12.073106 S 77.059067 W"
                     /collection_date="2019-11"
                     /collected_by="Lizet Lezameta"
WGS         JABCQU010000001-JABCQU010000132
WGS_SCAFLD  NZ_JABCQU010000001-NZ_JABCQU010000132
//
LOCUS       NZ_JBWBUR010000000   2501044 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Micrococcus sp. 63XJN7_8_ISO-PGPR-S23-253, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBWBUR000000000
VERSION     NZ_JBWBUR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449763
            Assembly: GCF_056173425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Micrococcus sp. 63XJN7_8_ISO-PGPR-S23-253
  ORGANISM  Micrococcus sp. 63XJN7_8_ISO-PGPR-S23-253
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Micrococcus.
REFERENCE   1  (bases 1 to 2501044)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2501044)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBUR000000000.1.
            The Micrococcus sp. 63XJN7_8_ISO-PGPR-S23-253 whole genome shotgun
            (WGS) project has the project accession NZ_JBWBUR000000000.  This
            version of the project (01) has the accession number
            NZ_JBWBUR010000000, and consists of sequence JBWBUR010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 59.3x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173425.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:41:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,316
            CDSs (total)                      :: 2,257
            Genes (coding)                    :: 2,226
            CDSs (with protein)               :: 2,226
            Genes (RNA)                       :: 59
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 18 of 31
            Pseudo Genes (incomplete)         :: 22 of 31
            Pseudo Genes (internal stop)      :: 3 of 31
            Pseudo Genes (multiple problems)  :: 11 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2501044
                     /organism="Micrococcus sp. 63XJN7_8_ISO-PGPR-S23-253"
                     /mol_type="genomic DNA"
                     /strain="63XJN7_8_ISO-PGPR-S23-253"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569823"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBUR010000001
WGS_SCAFLD  NZ_CM149673
//
LOCUS       NZ_JBHNZW010000000   6283815 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain DGLJ24, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBHNZW000000000
VERSION     NZ_JBHNZW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43881910
            Assembly: GCF_045798145.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6283815)
  AUTHORS   Rathod,M. and Gajjar,D.
  TITLE     Whole Genome Sequencing of pathogenic Pseudomonas aeruginosa from
            Western part of India
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6283815)
  AUTHORS   Rathod,M. and Gajjar,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-SEP-2024) Department of Microbiology and
            Biotechnology Centre, The Maharaja Sayajirao University of Baroda,
            Pratapgunj, Vadodara 390002, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBHNZW000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JBHNZW000000000.  This version of the
            project (01) has the accession number NZ_JBHNZW010000000, and
            consists of sequences JBHNZW010000001-JBHNZW010000082.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2022
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045798145.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:28:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,904
            CDSs (total)                      :: 5,840
            Genes (coding)                    :: 5,753
            CDSs (with protein)               :: 5,753
            Genes (RNA)                       :: 64
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 87
            CDSs (without protein)            :: 87
            Pseudo Genes (ambiguous residues) :: 0 of 87
            Pseudo Genes (frameshifted)       :: 16 of 87
            Pseudo Genes (incomplete)         :: 76 of 87
            Pseudo Genes (internal stop)      :: 2 of 87
            Pseudo Genes (multiple problems)  :: 7 of 87
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6283815
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="DGLJ24"
                     /isolation_source="urinary tract infection"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="India: Rajasthan"
                     /collection_date="2022"
                     /collected_by="Milan Rathod"
WGS         JBHNZW010000001-JBHNZW010000082
WGS_SCAFLD  NZ_JBHNZW010000001-NZ_JBHNZW010000082
//
LOCUS       NZ_JBWBWE010000000   3167458 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Planococcus plakortidis strain TRC1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBWBWE000000000
VERSION     NZ_JBWBWE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56502238
            Assembly: GCF_056175445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Planococcus plakortidis
  ORGANISM  Planococcus plakortidis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Planococcus.
REFERENCE   1  (bases 1 to 3167458)
  AUTHORS   Chityala,S., Dhali,D., Behera,M., Singh,G., Verma,A., Ray,A. and
            Dasgupta Mandal,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAR-2026) Biotechnology, NIT durgapur, Biotech
            department, NIT Durgapur, Mahatma Gandhi avenue, Durgapur, West
            Bengal 712309, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBWE000000000.1.
            The Planococcus plakortidis whole genome shotgun (WGS) project has
            the project accession NZ_JBWBWE000000000.  This version of the
            project (01) has the accession number NZ_JBWBWE010000000, and
            consists of sequences JBWBWE010000001-JBWBWE010000026.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Dalia Dasgupta Mandal,
            Department of Biotechnology, National Institute of Technology,
            Mahatma Gandhi avenue Durgapur, West Bengal 712309, India.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. Feb-2026
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 31.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056175445.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:43:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,182
            CDSs (total)                      :: 3,107
            Genes (coding)                    :: 3,086
            CDSs (with protein)               :: 3,086
            Genes (RNA)                       :: 75
            rRNAs                             :: 7, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3 (5S)
            partial rRNAs                     :: 4, 1, 3 (5S, 16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 21
            CDSs (without protein)            :: 21
            Pseudo Genes (ambiguous residues) :: 0 of 21
            Pseudo Genes (frameshifted)       :: 9 of 21
            Pseudo Genes (incomplete)         :: 7 of 21
            Pseudo Genes (internal stop)      :: 5 of 21
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3167458
                     /organism="Planococcus plakortidis"
                     /mol_type="genomic DNA"
                     /strain="TRC1"
                     /isolation_source="Tannery Industrial Effluent"
                     /db_xref="taxon:1038856"
                     /geo_loc_name="India: Kolkata"
                     /collection_date="2011"
WGS         JBWBWE010000001-JBWBWE010000026
WGS_SCAFLD  NZ_JBWBWE010000001-NZ_JBWBWE010000026
//
LOCUS       NZ_JAIXIQ010000000   7043337 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-40, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXIQ000000000
VERSION     NZ_JAIXIQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906756
            Assembly: GCF_045794975.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7043337)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7043337)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXIQ000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXIQ000000000.  This version of the
            project (01) has the accession number NZ_JAIXIQ010000000, and
            consists of sequences JAIXIQ010000001-JAIXIQ010000183.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 128x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045794975.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:14:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,735
            CDSs (total)                      :: 6,669
            Genes (coding)                    :: 6,555
            CDSs (with protein)               :: 6,555
            Genes (RNA)                       :: 66
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 114
            CDSs (without protein)            :: 114
            Pseudo Genes (ambiguous residues) :: 0 of 114
            Pseudo Genes (frameshifted)       :: 19 of 114
            Pseudo Genes (incomplete)         :: 99 of 114
            Pseudo Genes (internal stop)      :: 3 of 114
            Pseudo Genes (multiple problems)  :: 6 of 114
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7043337
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-40"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2019"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXIQ010000001-JAIXIQ010000183
WGS_SCAFLD  NZ_JAIXIQ010000001-NZ_JAIXIQ010000183
//
LOCUS       NZ_JBWBUP010000000   6751743 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Nocardiopsis sp. 63XJN7_2_ISO-PGPR-S23-208, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBWBUP000000000
VERSION     NZ_JBWBUP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449766
            Assembly: GCF_056173385.1
KEYWORDS    WGS; RefSeq.
SOURCE      Nocardiopsis sp. 63XJN7_2_ISO-PGPR-S23-208
  ORGANISM  Nocardiopsis sp. 63XJN7_2_ISO-PGPR-S23-208
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Nocardiopsidaceae; Nocardiopsis.
REFERENCE   1  (bases 1 to 6751743)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6751743)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBUP000000000.1.
            The Nocardiopsis sp. 63XJN7_2_ISO-PGPR-S23-208 whole genome shotgun
            (WGS) project has the project accession NZ_JBWBUP000000000.  This
            version of the project (01) has the accession number
            NZ_JBWBUP010000000, and consists of sequence JBWBUP010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 34.2x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173385.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 18:06:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,767
            CDSs (total)                      :: 5,693
            Genes (coding)                    :: 5,631
            CDSs (with protein)               :: 5,631
            Genes (RNA)                       :: 74
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 62
            CDSs (without protein)            :: 62
            Pseudo Genes (ambiguous residues) :: 0 of 62
            Pseudo Genes (frameshifted)       :: 23 of 62
            Pseudo Genes (incomplete)         :: 42 of 62
            Pseudo Genes (internal stop)      :: 7 of 62
            Pseudo Genes (multiple problems)  :: 10 of 62
            CRISPR Arrays                     :: 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6751743
                     /organism="Nocardiopsis sp. 63XJN7_2_ISO-PGPR-S23-208"
                     /mol_type="genomic DNA"
                     /strain="63XJN7_2_ISO-PGPR-S23-208"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569826"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBUP010000001
WGS_SCAFLD  NZ_CM149671
//
LOCUS       NZ_JAIXJC010000000   7181456 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-28, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXJC000000000
VERSION     NZ_JAIXJC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906744
            Assembly: GCF_045795165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7181456)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7181456)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXJC000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXJC000000000.  This version of the
            project (01) has the accession number NZ_JAIXJC010000000, and
            consists of sequences JAIXJC010000001-JAIXJC010000172.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 179x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795165.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:08:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,868
            CDSs (total)                      :: 6,792
            Genes (coding)                    :: 6,672
            CDSs (with protein)               :: 6,672
            Genes (RNA)                       :: 76
            rRNAs                             :: 1, 5, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 5, 3 (16S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 121
            CDSs (without protein)            :: 120
            Pseudo Genes (ambiguous residues) :: 0 of 121
            Pseudo Genes (frameshifted)       :: 24 of 121
            Pseudo Genes (incomplete)         :: 99 of 121
            Pseudo Genes (internal stop)      :: 7 of 121
            Pseudo Genes (multiple problems)  :: 8 of 121
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7181456
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-28"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2015"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXJC010000001-JAIXJC010000172
WGS_SCAFLD  NZ_JAIXJC010000001-NZ_JAIXJC010000172
//
LOCUS       NZ_JBWBUH010000000   5545508 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Peribacillus sp. QJM3NY_7, whole genome shotgun sequencing project.
ACCESSION   NZ_JBWBUH000000000
VERSION     NZ_JBWBUH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449774
            Assembly: GCF_056173225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Peribacillus sp. QJM3NY_7
  ORGANISM  Peribacillus sp. QJM3NY_7
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Peribacillus.
REFERENCE   1  (bases 1 to 5545508)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5545508)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBUH000000000.1.
            The Peribacillus sp. QJM3NY_7 whole genome shotgun (WGS) project
            has the project accession NZ_JBWBUH000000000.  This version of the
            project (01) has the accession number NZ_JBWBUH010000000, and
            consists of sequence JBWBUH010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 91.2x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173225.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:55:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,368
            CDSs (total)                      :: 5,237
            Genes (coding)                    :: 5,108
            CDSs (with protein)               :: 5,108
            Genes (RNA)                       :: 131
            rRNAs                             :: 14, 14, 14 (5S, 16S, 23S)
            complete rRNAs                    :: 14, 14, 14 (5S, 16S, 23S)
            tRNAs                             :: 83
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 129
            CDSs (without protein)            :: 129
            Pseudo Genes (ambiguous residues) :: 0 of 129
            Pseudo Genes (frameshifted)       :: 72 of 129
            Pseudo Genes (incomplete)         :: 85 of 129
            Pseudo Genes (internal stop)      :: 26 of 129
            Pseudo Genes (multiple problems)  :: 44 of 129
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5545508
                     /organism="Peribacillus sp. QJM3NY_7"
                     /mol_type="genomic DNA"
                     /strain="QJM3NY_7"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569834"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBUH010000001
WGS_SCAFLD  NZ_CM149663
//
LOCUS       NZ_JAIXJQ010000000   7014056 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-14, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXJQ000000000
VERSION     NZ_JAIXJQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906730
            Assembly: GCF_045795425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7014056)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7014056)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXJQ000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXJQ000000000.  This version of the
            project (01) has the accession number NZ_JAIXJQ010000000, and
            consists of sequences JAIXJQ010000001-JAIXJQ010000205.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 27x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795425.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:17:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,804
            CDSs (total)                      :: 6,738
            Genes (coding)                    :: 6,574
            CDSs (with protein)               :: 6,574
            Genes (RNA)                       :: 66
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 57
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 164
            CDSs (without protein)            :: 164
            Pseudo Genes (ambiguous residues) :: 0 of 164
            Pseudo Genes (frameshifted)       :: 34 of 164
            Pseudo Genes (incomplete)         :: 133 of 164
            Pseudo Genes (internal stop)      :: 7 of 164
            Pseudo Genes (multiple problems)  :: 10 of 164
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7014056
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-14"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2013"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXJQ010000001-JAIXJQ010000205
WGS_SCAFLD  NZ_JAIXJQ010000001-NZ_JAIXJQ010000205
//
LOCUS       NZ_JAIXJK010000000   6917089 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-20, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXJK000000000
VERSION     NZ_JAIXJK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906736
            Assembly: GCF_045795355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6917089)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6917089)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXJK000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXJK000000000.  This version of the
            project (01) has the accession number NZ_JAIXJK010000000, and
            consists of sequences JAIXJK010000001-JAIXJK010000206.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 168x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795355.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:24:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,529
            CDSs (total)                      :: 6,464
            Genes (coding)                    :: 6,358
            CDSs (with protein)               :: 6,358
            Genes (RNA)                       :: 65
            rRNAs                             :: 1, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 3 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 106
            CDSs (without protein)            :: 106
            Pseudo Genes (ambiguous residues) :: 0 of 106
            Pseudo Genes (frameshifted)       :: 20 of 106
            Pseudo Genes (incomplete)         :: 90 of 106
            Pseudo Genes (internal stop)      :: 3 of 106
            Pseudo Genes (multiple problems)  :: 6 of 106
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6917089
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-20"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2014"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXJK010000001-JAIXJK010000206
WGS_SCAFLD  NZ_JAIXJK010000001-NZ_JAIXJK010000206
//
LOCUS       NZ_JBWBUO010000000   5588816 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Nocardiopsis sp. iso_186, whole genome shotgun sequencing project.
ACCESSION   NZ_JBWBUO000000000
VERSION     NZ_JBWBUO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449767
            Assembly: GCF_056173365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Nocardiopsis sp. iso_186
  ORGANISM  Nocardiopsis sp. iso_186
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Nocardiopsidaceae; Nocardiopsis.
REFERENCE   1  (bases 1 to 5588816)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5588816)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBUO000000000.1.
            The Nocardiopsis sp. iso_186 whole genome shotgun (WGS) project has
            the project accession NZ_JBWBUO000000000.  This version of the
            project (01) has the accession number NZ_JBWBUO010000000, and
            consists of sequences JBWBUO010000001-JBWBUO010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 114.8x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173365.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 18:06:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,896
            CDSs (total)                      :: 4,828
            Genes (coding)                    :: 4,765
            CDSs (with protein)               :: 4,765
            Genes (RNA)                       :: 68
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 16 of 63
            Pseudo Genes (incomplete)         :: 40 of 63
            Pseudo Genes (internal stop)      :: 21 of 63
            Pseudo Genes (multiple problems)  :: 13 of 63
            CRISPR Arrays                     :: 19
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5588816
                     /organism="Nocardiopsis sp. iso_186"
                     /mol_type="genomic DNA"
                     /strain="iso_186"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569827"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBUO010000001-JBWBUO010000002
WGS_SCAFLD  NZ_CM149670
WGS_SCAFLD  NZ_JBWBUO010000002
//
LOCUS       NZ_JBWBUF010000000   4176507 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudoalteromonas sp. QJM3NY_12, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWBUF000000000
VERSION     NZ_JBWBUF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449776
            Assembly: GCF_056173165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudoalteromonas sp. QJM3NY_12
  ORGANISM  Pseudoalteromonas sp. QJM3NY_12
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.
REFERENCE   1  (bases 1 to 4176507)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4176507)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBUF000000000.1.
            The Pseudoalteromonas sp. QJM3NY_12 whole genome shotgun (WGS)
            project has the project accession NZ_JBWBUF000000000.  This version
            of the project (01) has the accession number NZ_JBWBUF010000000,
            and consists of sequences JBWBUF010000001-JBWBUF010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 71.6x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173165.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 18:40:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,826
            CDSs (total)                      :: 3,696
            Genes (coding)                    :: 3,664
            CDSs (with protein)               :: 3,664
            Genes (RNA)                       :: 130
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 101
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 32
            CDSs (without protein)            :: 32
            Pseudo Genes (ambiguous residues) :: 0 of 32
            Pseudo Genes (frameshifted)       :: 18 of 32
            Pseudo Genes (incomplete)         :: 19 of 32
            Pseudo Genes (internal stop)      :: 5 of 32
            Pseudo Genes (multiple problems)  :: 8 of 32
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4176507
                     /organism="Pseudoalteromonas sp. QJM3NY_12"
                     /mol_type="genomic DNA"
                     /strain="QJM3NY_12"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569835"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBUF010000001-JBWBUF010000002
WGS_SCAFLD  NZ_CM149661
WGS_SCAFLD  NZ_JBWBUF010000002
//
LOCUS       NZ_JALKJW010000000   4993148 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pantoea ananatis strain 200-10, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JALKJW000000000
VERSION     NZ_JALKJW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN27527440
            Assembly: GCF_029081525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea ananatis
  ORGANISM  Pantoea ananatis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea.
REFERENCE   1  (bases 1 to 4993148)
  AUTHORS   Myers,B.K., Shin,G.Y., Agarwal,G., Stice,S.P., Gitaitis,R.D.,
            Kvitko,B.H. and Dutta,B.
  TITLE     Genome-wide association and dissociation studies in Pantoea
            ananatis reveal potential virulence factors affecting Allium porrum
            and Allium fistulosum x Allium cepa hybrid
  JOURNAL   Front Microbiol 13, 1094155 (2023)
   PUBMED   36817114
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4993148)
  AUTHORS   Myers,B.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2022) Plant Pathology, University of Georgia,
            2806 Rebecca Rd, Tifton, GA 31794, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JALKJW000000000.1.
            The Pantoea ananatis whole genome shotgun (WGS) project has the
            project accession NZ_JALKJW000000000.  This version of the project
            (01) has the accession number NZ_JALKJW010000000, and consists of
            sequences JALKJW010000001-JALKJW010000037.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 10-20x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029081525.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:47:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,648
            CDSs (total)                      :: 4,570
            Genes (coding)                    :: 4,501
            CDSs (with protein)               :: 4,501
            Genes (RNA)                       :: 78
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 19
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 30 of 69
            Pseudo Genes (incomplete)         :: 43 of 69
            Pseudo Genes (internal stop)      :: 17 of 69
            Pseudo Genes (multiple problems)  :: 19 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4993148
                     /organism="Pantoea ananatis"
                     /mol_type="genomic DNA"
                     /strain="200-10"
                     /host="Onion"
                     /db_xref="taxon:553"
                     /geo_loc_name="USA: Tift Co. GA"
                     /collection_date="2000"
WGS         JALKJW010000001-JALKJW010000037
WGS_SCAFLD  NZ_JALKJW010000001-NZ_JALKJW010000037
//
LOCUS       NZ_JBHNZY010000000   6560595 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain DGLJ27, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBHNZY000000000
VERSION     NZ_JBHNZY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43881912
            Assembly: GCF_045798105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6560595)
  AUTHORS   Rathod,M. and Gajjar,D.
  TITLE     Whole Genome Sequencing of pathogenic Pseudomonas aeruginosa from
            Western part of India
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6560595)
  AUTHORS   Rathod,M. and Gajjar,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-SEP-2024) Department of Microbiology and
            Biotechnology Centre, The Maharaja Sayajirao University of Baroda,
            Pratapgunj, Vadodara 390002, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBHNZY000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JBHNZY000000000.  This version of the
            project (01) has the accession number NZ_JBHNZY010000000, and
            consists of sequences JBHNZY010000001-JBHNZY010000157.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2022
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045798105.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:42:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,318
            CDSs (total)                      :: 6,254
            Genes (coding)                    :: 6,136
            CDSs (with protein)               :: 6,136
            Genes (RNA)                       :: 64
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 18 of 118
            Pseudo Genes (incomplete)         :: 101 of 118
            Pseudo Genes (internal stop)      :: 8 of 118
            Pseudo Genes (multiple problems)  :: 8 of 118
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6560595
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="DGLJ27"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="India: Rajasthan"
                     /collection_date="2022"
                     /collected_by="Milan Rathod"
WGS         JBHNZY010000001-JBHNZY010000157
WGS_SCAFLD  NZ_JBHNZY010000001-NZ_JBHNZY010000157
//
LOCUS       NZ_JBJFMM010000000   7278029 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain LYM-E19, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJFMM000000000
VERSION     NZ_JBJFMM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44671623
            Assembly: GCF_045763695.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7278029)
  AUTHORS   Gagaletsios,L.A. and Papagiannitsis,C.
  TITLE     Isolation of Carbapenemase-Producing Pseudomonas aeruginosa from a
            waste-water sample collected from a Greek University Hospital
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7278029)
  AUTHORS   Gagaletsios,L.A. and Papagiannitsis,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-NOV-2024) Faculty of Medicine, University of
            Thessaly, Mezourlo, Larissa, Thessaly 41110, Greece
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJFMM000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JBJFMM000000000.  This version of the
            project (01) has the accession number NZ_JBJFMM010000000, and
            consists of sequences JBJFMM010000001-JBJFMM010000169.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045763695.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:56:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,019
            CDSs (total)                      :: 6,954
            Genes (coding)                    :: 6,813
            CDSs (with protein)               :: 6,813
            Genes (RNA)                       :: 65
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 141
            CDSs (without protein)            :: 141
            Pseudo Genes (ambiguous residues) :: 0 of 141
            Pseudo Genes (frameshifted)       :: 37 of 141
            Pseudo Genes (incomplete)         :: 109 of 141
            Pseudo Genes (internal stop)      :: 7 of 141
            Pseudo Genes (multiple problems)  :: 12 of 141
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7278029
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="LYM-E19"
                     /isolation_source="waste-water"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Greece: Larissa, Thessaly"
                     /lat_lon="39.6390 N 22.4191 E"
                     /collection_date="2023-12"
                     /collected_by="Lazaros Gagaletsios"
WGS         JBJFMM010000001-JBJFMM010000169
WGS_SCAFLD  NZ_JBJFMM010000001-NZ_JBJFMM010000169
//
LOCUS       NZ_JALKKB010000000   5039766 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pantoea ananatis strain 98-11, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JALKKB000000000
VERSION     NZ_JALKKB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN27527435
            Assembly: GCF_029081505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea ananatis
  ORGANISM  Pantoea ananatis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea.
REFERENCE   1  (bases 1 to 5039766)
  AUTHORS   Myers,B.K., Shin,G.Y., Agarwal,G., Stice,S.P., Gitaitis,R.D.,
            Kvitko,B.H. and Dutta,B.
  TITLE     Genome-wide association and dissociation studies in Pantoea
            ananatis reveal potential virulence factors affecting Allium porrum
            and Allium fistulosum x Allium cepa hybrid
  JOURNAL   Front Microbiol 13, 1094155 (2023)
   PUBMED   36817114
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5039766)
  AUTHORS   Myers,B.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2022) Plant Pathology, University of Georgia,
            2806 Rebecca Rd, Tifton, GA 31794, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JALKKB000000000.1.
            The Pantoea ananatis whole genome shotgun (WGS) project has the
            project accession NZ_JALKKB000000000.  This version of the project
            (01) has the accession number NZ_JALKKB010000000, and consists of
            sequences JALKKB010000001-JALKKB010000054.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 10-20x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029081505.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:52:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,711
            CDSs (total)                      :: 4,636
            Genes (coding)                    :: 4,558
            CDSs (with protein)               :: 4,558
            Genes (RNA)                       :: 75
            rRNAs                             :: 3, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2, 2 (5S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 78
            CDSs (without protein)            :: 78
            Pseudo Genes (ambiguous residues) :: 0 of 78
            Pseudo Genes (frameshifted)       :: 38 of 78
            Pseudo Genes (incomplete)         :: 51 of 78
            Pseudo Genes (internal stop)      :: 15 of 78
            Pseudo Genes (multiple problems)  :: 23 of 78
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5039766
                     /organism="Pantoea ananatis"
                     /mol_type="genomic DNA"
                     /strain="98-11"
                     /host="Onion"
                     /db_xref="taxon:553"
                     /geo_loc_name="USA: Evans Co. GA"
                     /collection_date="1998"
WGS         JALKKB010000001-JALKKB010000054
WGS_SCAFLD  NZ_JALKKB010000001-NZ_JALKKB010000054
//
LOCUS       NZ_JBJFML010000000   6986231 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain LYM-D16, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJFML000000000
VERSION     NZ_JBJFML000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44671622
            Assembly: GCF_045763735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6986231)
  AUTHORS   Gagaletsios,L.A. and Papagiannitsis,C.
  TITLE     Isolation of Carbapenemase-Producing Pseudomonas aeruginosa from a
            waste-water sample collected from a Greek University Hospital
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6986231)
  AUTHORS   Gagaletsios,L.A. and Papagiannitsis,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-NOV-2024) Faculty of Medicine, University of
            Thessaly, Mezourlo, Larissa, Thessaly 41110, Greece
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJFML000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JBJFML000000000.  This version of the
            project (01) has the accession number NZ_JBJFML010000000, and
            consists of sequences JBJFML010000001-JBJFML010000305.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045763735.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:47:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,736
            CDSs (total)                      :: 6,674
            Genes (coding)                    :: 6,508
            CDSs (with protein)               :: 6,508
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 18 of 166
            Pseudo Genes (incomplete)         :: 152 of 166
            Pseudo Genes (internal stop)      :: 3 of 166
            Pseudo Genes (multiple problems)  :: 6 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6986231
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="LYM-D16"
                     /isolation_source="waste-water"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Greece: Larissa, Thessaly"
                     /lat_lon="39.6390 N 22.4191 E"
                     /collection_date="2023-12"
                     /collected_by="Lazaros Gagaletsios"
WGS         JBJFML010000001-JBJFML010000305
WGS_SCAFLD  NZ_JBJFML010000001-NZ_JBJFML010000305
//
LOCUS       NZ_JAIXIT010000000   6830353 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-37, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXIT000000000
VERSION     NZ_JAIXIT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906753
            Assembly: GCF_045794965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6830353)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6830353)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXIT000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXIT000000000.  This version of the
            project (01) has the accession number NZ_JAIXIT010000000, and
            consists of sequences JAIXIT010000001-JAIXIT010000120.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 64x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045794965.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:02:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,569
            CDSs (total)                      :: 6,505
            Genes (coding)                    :: 6,379
            CDSs (with protein)               :: 6,379
            Genes (RNA)                       :: 64
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 126
            CDSs (without protein)            :: 126
            Pseudo Genes (ambiguous residues) :: 0 of 126
            Pseudo Genes (frameshifted)       :: 34 of 126
            Pseudo Genes (incomplete)         :: 95 of 126
            Pseudo Genes (internal stop)      :: 7 of 126
            Pseudo Genes (multiple problems)  :: 10 of 126
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6830353
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-37"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2018"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXIT010000001-JAIXIT010000120
WGS_SCAFLD  NZ_JAIXIT010000001-NZ_JAIXIT010000120
//
LOCUS       NZ_CDVLMA010000000   3777125 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Oceanobacillus kimchii isolate MarMAG_114231, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVLMA000000000
VERSION     NZ_CDVLMA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737262
            Assembly: GCF_977710905.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Oceanobacillus kimchii (marine metagenome)
  ORGANISM  Oceanobacillus kimchii
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Oceanobacillus.
REFERENCE   1  (bases 1 to 3777125)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVLMA000000000.1.
            The Oceanobacillus kimchii whole genome shotgun (WGS) project has
            the project accession NZ_CDVLMA000000000.  This version of the
            project (01) has the accession number NZ_CDVLMA010000000, and
            consists of sequences CDVLMA010000001-CDVLMA010000010.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977710905.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:30:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,757
            CDSs (total)                      :: 3,704
            Genes (coding)                    :: 3,668
            CDSs (with protein)               :: 3,668
            Genes (RNA)                       :: 53
            rRNAs                             :: 3 (5S)
            complete rRNAs                    :: 3 (5S)
            tRNAs                             :: 45
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 36
            CDSs (without protein)            :: 36
            Pseudo Genes (ambiguous residues) :: 0 of 36
            Pseudo Genes (frameshifted)       :: 16 of 36
            Pseudo Genes (incomplete)         :: 21 of 36
            Pseudo Genes (internal stop)      :: 2 of 36
            Pseudo Genes (multiple problems)  :: 3 of 36
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3777125
                     /organism="Oceanobacillus kimchii"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_114231"
                     /isolation_source="Mariana Trench, free-living
                     microorganism abyssal water (4,000 m)"
                     /db_xref="taxon:746691"
                     /environmental_sample
                     /geo_loc_name="Pacific Ocean"
                     /collection_date="2016-09-15"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVLMA010000001-CDVLMA010000010
WGS_SCAFLD  NZ_CDVLMA010000001-NZ_CDVLMA010000010
//
LOCUS       NZ_JBJFMJ010000000   6853204 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain LYM-A1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJFMJ000000000
VERSION     NZ_JBJFMJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44671620
            Assembly: GCF_045763775.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6853204)
  AUTHORS   Gagaletsios,L.A. and Papagiannitsis,C.
  TITLE     Isolation of Carbapenemase-Producing Pseudomonas aeruginosa from a
            waste-water sample collected from a Greek University Hospital
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6853204)
  AUTHORS   Gagaletsios,L.A. and Papagiannitsis,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-NOV-2024) Faculty of Medicine, University of
            Thessaly, Mezourlo, Larissa, Thessaly 41110, Greece
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJFMJ000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JBJFMJ000000000.  This version of the
            project (01) has the accession number NZ_JBJFMJ010000000, and
            consists of sequences JBJFMJ010000001-JBJFMJ010000180.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045763775.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:56:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,583
            CDSs (total)                      :: 6,522
            Genes (coding)                    :: 6,380
            CDSs (with protein)               :: 6,380
            Genes (RNA)                       :: 61
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 142
            CDSs (without protein)            :: 142
            Pseudo Genes (ambiguous residues) :: 0 of 142
            Pseudo Genes (frameshifted)       :: 30 of 142
            Pseudo Genes (incomplete)         :: 116 of 142
            Pseudo Genes (internal stop)      :: 10 of 142
            Pseudo Genes (multiple problems)  :: 12 of 142
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6853204
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="LYM-A1"
                     /isolation_source="waste-water"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Greece: Larissa, Thessaly"
                     /lat_lon="39.6390 N 22.4191 E"
                     /collection_date="2023-12"
                     /collected_by="Lazaros Gagaletsios"
WGS         JBJFMJ010000001-JBJFMJ010000180
WGS_SCAFLD  NZ_JBJFMJ010000001-NZ_JBJFMJ010000180
//
LOCUS       NZ_JAIXJO010000000   7003565 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-16, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXJO000000000
VERSION     NZ_JAIXJO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906732
            Assembly: GCF_045795465.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7003565)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7003565)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXJO000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXJO000000000.  This version of the
            project (01) has the accession number NZ_JAIXJO010000000, and
            consists of sequences JAIXJO010000001-JAIXJO010000141.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 94x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795465.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:06:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,786
            CDSs (total)                      :: 6,716
            Genes (coding)                    :: 6,615
            CDSs (with protein)               :: 6,615
            Genes (RNA)                       :: 70
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 101
            CDSs (without protein)            :: 101
            Pseudo Genes (ambiguous residues) :: 0 of 101
            Pseudo Genes (frameshifted)       :: 24 of 101
            Pseudo Genes (incomplete)         :: 77 of 101
            Pseudo Genes (internal stop)      :: 8 of 101
            Pseudo Genes (multiple problems)  :: 6 of 101
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7003565
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-16"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2013"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXJO010000001-JAIXJO010000141
WGS_SCAFLD  NZ_JAIXJO010000001-NZ_JAIXJO010000141
//
LOCUS       NZ_JBHNZU010000000   6908745 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain DGLJ22, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBHNZU000000000
VERSION     NZ_JBHNZU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43881908
            Assembly: GCF_045798215.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6908745)
  AUTHORS   Rathod,M. and Gajjar,D.
  TITLE     Whole Genome Sequencing of pathogenic Pseudomonas aeruginosa from
            Western part of India
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6908745)
  AUTHORS   Rathod,M. and Gajjar,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-SEP-2024) Department of Microbiology and
            Biotechnology Centre, The Maharaja Sayajirao University of Baroda,
            Pratapgunj, Vadodara 390002, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBHNZU000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JBHNZU000000000.  This version of the
            project (01) has the accession number NZ_JBHNZU010000000, and
            consists of sequences JBHNZU010000001-JBHNZU010000196.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2022
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045798215.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:38:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,548
            CDSs (total)                      :: 6,483
            Genes (coding)                    :: 6,349
            CDSs (with protein)               :: 6,349
            Genes (RNA)                       :: 65
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 134
            CDSs (without protein)            :: 134
            Pseudo Genes (ambiguous residues) :: 0 of 134
            Pseudo Genes (frameshifted)       :: 30 of 134
            Pseudo Genes (incomplete)         :: 107 of 134
            Pseudo Genes (internal stop)      :: 9 of 134
            Pseudo Genes (multiple problems)  :: 10 of 134
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6908745
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="DGLJ22"
                     /isolation_source="ET secretions"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="India: Rajasthan"
                     /collection_date="2022"
                     /collected_by="Milan Rathod"
WGS         JBHNZU010000001-JBHNZU010000196
WGS_SCAFLD  NZ_JBHNZU010000001-NZ_JBHNZU010000196
//
LOCUS       NZ_JAIXIV010000000   6750496 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-35, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXIV000000000
VERSION     NZ_JAIXIV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906751
            Assembly: GCF_045795025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6750496)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6750496)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXIV000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXIV000000000.  This version of the
            project (01) has the accession number NZ_JAIXIV010000000, and
            consists of sequences JAIXIV010000001-JAIXIV010000097.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 110x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795025.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:04:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,408
            CDSs (total)                      :: 6,341
            Genes (coding)                    :: 6,262
            CDSs (with protein)               :: 6,262
            Genes (RNA)                       :: 67
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 79
            CDSs (without protein)            :: 79
            Pseudo Genes (ambiguous residues) :: 0 of 79
            Pseudo Genes (frameshifted)       :: 16 of 79
            Pseudo Genes (incomplete)         :: 67 of 79
            Pseudo Genes (internal stop)      :: 3 of 79
            Pseudo Genes (multiple problems)  :: 6 of 79
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6750496
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-35"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2017"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXIV010000001-JAIXIV010000097
WGS_SCAFLD  NZ_JAIXIV010000001-NZ_JAIXIV010000097
//
LOCUS       NZ_JAIXJE010000000   6974212 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-26, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXJE000000000
VERSION     NZ_JAIXJE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906742
            Assembly: GCF_045795225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6974212)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6974212)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXJE000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXJE000000000.  This version of the
            project (01) has the accession number NZ_JAIXJE010000000, and
            consists of sequences JAIXJE010000001-JAIXJE010000278.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 56x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795225.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:18:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,791
            CDSs (total)                      :: 6,724
            Genes (coding)                    :: 6,577
            CDSs (with protein)               :: 6,577
            Genes (RNA)                       :: 67
            rRNAs                             :: 1, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 147
            CDSs (without protein)            :: 147
            Pseudo Genes (ambiguous residues) :: 0 of 147
            Pseudo Genes (frameshifted)       :: 23 of 147
            Pseudo Genes (incomplete)         :: 131 of 147
            Pseudo Genes (internal stop)      :: 7 of 147
            Pseudo Genes (multiple problems)  :: 13 of 147
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6974212
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-26"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2015"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXJE010000001-JAIXJE010000278
WGS_SCAFLD  NZ_JAIXJE010000001-NZ_JAIXJE010000278
//
LOCUS       NZ_CAYTDV010000000   7078298 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain Psae03028 isolate Psae03028, whole
            genome shotgun sequencing project.
ACCESSION   NZ_CAYTDV000000000
VERSION     NZ_CAYTDV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117477669
            Assembly: GCF_964436685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7078298)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2024) Universitaetsklinikum Freiburg, Institute
            for infection prevention and control, Breisacher Strasse 115B,
            79106 Freiburg, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAYTDV000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_CAYTDV000000000.  This version of the
            project (01) has the accession number NZ_CAYTDV010000000, and
            consists of sequences CAYTDV010000001-CAYTDV010000101.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964436685.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:56:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,832
            CDSs (total)                      :: 6,755
            Genes (coding)                    :: 6,646
            CDSs (with protein)               :: 6,646
            Genes (RNA)                       :: 77
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 110
            CDSs (without protein)            :: 109
            Pseudo Genes (ambiguous residues) :: 0 of 110
            Pseudo Genes (frameshifted)       :: 26 of 110
            Pseudo Genes (incomplete)         :: 83 of 110
            Pseudo Genes (internal stop)      :: 8 of 110
            Pseudo Genes (multiple problems)  :: 7 of 110
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7078298
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="Psae03028"
                     /isolate="Psae03028"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Germany"
                     /lat_lon="47.99 N 7.84 E"
                     /collection_date="2019"
WGS         CAYTDV010000001-CAYTDV010000101
WGS_SCAFLD  NZ_CAYTDV010000001-NZ_CAYTDV010000101
//
LOCUS       NZ_JAIXJW010000000   7360219 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-08, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXJW000000000
VERSION     NZ_JAIXJW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906724
            Assembly: GCF_045795525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7360219)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7360219)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXJW000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXJW000000000.  This version of the
            project (01) has the accession number NZ_JAIXJW010000000, and
            consists of sequences JAIXJW010000001-JAIXJW010000224.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 39x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795525.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:05:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,139
            CDSs (total)                      :: 7,073
            Genes (coding)                    :: 6,901
            CDSs (with protein)               :: 6,901
            Genes (RNA)                       :: 66
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 172
            CDSs (without protein)            :: 172
            Pseudo Genes (ambiguous residues) :: 0 of 172
            Pseudo Genes (frameshifted)       :: 36 of 172
            Pseudo Genes (incomplete)         :: 140 of 172
            Pseudo Genes (internal stop)      :: 6 of 172
            Pseudo Genes (multiple problems)  :: 10 of 172
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7360219
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-08"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2010"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXJW010000001-JAIXJW010000224
WGS_SCAFLD  NZ_JAIXJW010000001-NZ_JAIXJW010000224
//
LOCUS       NZ_JBWBUK010000000   6007045 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Nocardiopsis sp. iso_40, whole genome shotgun sequencing project.
ACCESSION   NZ_JBWBUK000000000
VERSION     NZ_JBWBUK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449771
            Assembly: GCF_056173285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Nocardiopsis sp. iso_40
  ORGANISM  Nocardiopsis sp. iso_40
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Nocardiopsidaceae; Nocardiopsis.
REFERENCE   1  (bases 1 to 6007045)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6007045)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBUK000000000.1.
            The Nocardiopsis sp. iso_40 whole genome shotgun (WGS) project has
            the project accession NZ_JBWBUK000000000.  This version of the
            project (01) has the accession number NZ_JBWBUK010000000, and
            consists of sequence JBWBUK010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 59.6x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173285.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:57:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,267
            CDSs (total)                      :: 5,192
            Genes (coding)                    :: 5,132
            CDSs (with protein)               :: 5,132
            Genes (RNA)                       :: 75
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 60
            CDSs (without protein)            :: 60
            Pseudo Genes (ambiguous residues) :: 0 of 60
            Pseudo Genes (frameshifted)       :: 21 of 60
            Pseudo Genes (incomplete)         :: 42 of 60
            Pseudo Genes (internal stop)      :: 5 of 60
            Pseudo Genes (multiple problems)  :: 7 of 60
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6007045
                     /organism="Nocardiopsis sp. iso_40"
                     /mol_type="genomic DNA"
                     /strain="iso_40"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569831"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBUK010000001
WGS_SCAFLD  NZ_CM149666
//
LOCUS       NZ_JAIXIL010000000   6890598 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-45, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXIL000000000
VERSION     NZ_JAIXIL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906761
            Assembly: GCF_045794785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6890598)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6890598)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXIL000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXIL000000000.  This version of the
            project (01) has the accession number NZ_JAIXIL010000000, and
            consists of sequences JAIXIL010000001-JAIXIL010000166.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 119x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045794785.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:06:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,579
            CDSs (total)                      :: 6,517
            Genes (coding)                    :: 6,394
            CDSs (with protein)               :: 6,394
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 31 of 123
            Pseudo Genes (incomplete)         :: 99 of 123
            Pseudo Genes (internal stop)      :: 3 of 123
            Pseudo Genes (multiple problems)  :: 10 of 123
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6890598
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-45"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2020"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXIL010000001-JAIXIL010000166
WGS_SCAFLD  NZ_JAIXIL010000001-NZ_JAIXIL010000166
//
LOCUS       NZ_JBHOAE010000000   6844414 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain DGLU, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBHOAE000000000
VERSION     NZ_JBHOAE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43881918
            Assembly: GCF_045797905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6844414)
  AUTHORS   Rathod,M. and Gajjar,D.
  TITLE     Whole Genome Sequencing of pathogenic Pseudomonas aeruginosa from
            Western part of India
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6844414)
  AUTHORS   Rathod,M. and Gajjar,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-SEP-2024) Department of Microbiology and
            Biotechnology Centre, The Maharaja Sayajirao University of Baroda,
            Pratapgunj, Vadodara 390002, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBHOAE000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JBHOAE000000000.  This version of the
            project (01) has the accession number NZ_JBHOAE010000000, and
            consists of sequences JBHOAE010000001-JBHOAE010000124.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2022
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797905.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:29:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,480
            CDSs (total)                      :: 6,416
            Genes (coding)                    :: 6,290
            CDSs (with protein)               :: 6,290
            Genes (RNA)                       :: 64
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 126
            CDSs (without protein)            :: 126
            Pseudo Genes (ambiguous residues) :: 0 of 126
            Pseudo Genes (frameshifted)       :: 25 of 126
            Pseudo Genes (incomplete)         :: 105 of 126
            Pseudo Genes (internal stop)      :: 6 of 126
            Pseudo Genes (multiple problems)  :: 8 of 126
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6844414
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="DGLU"
                     /isolation_source="urinary tract infection"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="India: Rajasthan"
                     /collection_date="2022"
                     /collected_by="Milan Rathod"
WGS         JBHOAE010000001-JBHOAE010000124
WGS_SCAFLD  NZ_JBHOAE010000001-NZ_JBHOAE010000124
//
LOCUS       NZ_JAIXIS010000000   7089837 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-38, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXIS000000000
VERSION     NZ_JAIXIS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906754
            Assembly: GCF_045794945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7089837)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7089837)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXIS000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXIS000000000.  This version of the
            project (01) has the accession number NZ_JAIXIS010000000, and
            consists of sequences JAIXIS010000001-JAIXIS010000314.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 50x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045794945.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:06:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,927
            CDSs (total)                      :: 6,858
            Genes (coding)                    :: 6,661
            CDSs (with protein)               :: 6,661
            Genes (RNA)                       :: 69
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 59
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 197
            CDSs (without protein)            :: 197
            Pseudo Genes (ambiguous residues) :: 0 of 197
            Pseudo Genes (frameshifted)       :: 39 of 197
            Pseudo Genes (incomplete)         :: 162 of 197
            Pseudo Genes (internal stop)      :: 10 of 197
            Pseudo Genes (multiple problems)  :: 13 of 197
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7089837
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-38"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2018"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXIS010000001-JAIXIS010000314
WGS_SCAFLD  NZ_JAIXIS010000001-NZ_JAIXIS010000314
//
LOCUS       NZ_JBHNZS010000000   6987496 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain DGLJ13, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBHNZS000000000
VERSION     NZ_JBHNZS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43881906
            Assembly: GCF_045798185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6987496)
  AUTHORS   Rathod,M. and Gajjar,D.
  TITLE     Whole Genome Sequencing of pathogenic Pseudomonas aeruginosa from
            Western part of India
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6987496)
  AUTHORS   Rathod,M. and Gajjar,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-SEP-2024) Department of Microbiology and
            Biotechnology Centre, The Maharaja Sayajirao University of Baroda,
            Pratapgunj, Vadodara 390002, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBHNZS000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JBHNZS000000000.  This version of the
            project (01) has the accession number NZ_JBHNZS010000000, and
            consists of sequences JBHNZS010000001-JBHNZS010000109.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2022
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045798185.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:26:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,685
            CDSs (total)                      :: 6,615
            Genes (coding)                    :: 6,507
            CDSs (with protein)               :: 6,507
            Genes (RNA)                       :: 70
            rRNAs                             :: 4, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 2, 2 (5S, 16S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 25 of 108
            Pseudo Genes (incomplete)         :: 87 of 108
            Pseudo Genes (internal stop)      :: 6 of 108
            Pseudo Genes (multiple problems)  :: 8 of 108
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6987496
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="DGLJ13"
                     /isolation_source="ET secretions"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="India: Rajasthan"
                     /collection_date="2022"
                     /collected_by="Milan Rathod"
WGS         JBHNZS010000001-JBHNZS010000109
WGS_SCAFLD  NZ_JBHNZS010000001-NZ_JBHNZS010000109
//
LOCUS       NZ_JAIXIW010000000   6980892 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-34, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXIW000000000
VERSION     NZ_JAIXIW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906750
            Assembly: GCF_045795045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6980892)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6980892)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXIW000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXIW000000000.  This version of the
            project (01) has the accession number NZ_JAIXIW010000000, and
            consists of sequences JAIXIW010000001-JAIXIW010000206.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 63x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795045.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:06:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,756
            CDSs (total)                      :: 6,687
            Genes (coding)                    :: 6,522
            CDSs (with protein)               :: 6,522
            Genes (RNA)                       :: 69
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 59
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 165
            CDSs (without protein)            :: 165
            Pseudo Genes (ambiguous residues) :: 0 of 165
            Pseudo Genes (frameshifted)       :: 37 of 165
            Pseudo Genes (incomplete)         :: 128 of 165
            Pseudo Genes (internal stop)      :: 11 of 165
            Pseudo Genes (multiple problems)  :: 10 of 165
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6980892
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-34"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2016"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXIW010000001-JAIXIW010000206
WGS_SCAFLD  NZ_JAIXIW010000001-NZ_JAIXIW010000206
//
LOCUS       NZ_JBWBUM010000000   6257979 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Nocardiopsis sp. iso_238, whole genome shotgun sequencing project.
ACCESSION   NZ_JBWBUM000000000
VERSION     NZ_JBWBUM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449769
            Assembly: GCF_056173325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Nocardiopsis sp. iso_238
  ORGANISM  Nocardiopsis sp. iso_238
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Nocardiopsidaceae; Nocardiopsis.
REFERENCE   1  (bases 1 to 6257979)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6257979)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBUM000000000.1.
            The Nocardiopsis sp. iso_238 whole genome shotgun (WGS) project has
            the project accession NZ_JBWBUM000000000.  This version of the
            project (01) has the accession number NZ_JBWBUM010000000, and
            consists of sequences JBWBUM010000001-JBWBUM010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 149.3x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173325.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 18:00:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,622
            CDSs (total)                      :: 5,543
            Genes (coding)                    :: 5,511
            CDSs (with protein)               :: 5,511
            Genes (RNA)                       :: 79
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 32
            CDSs (without protein)            :: 32
            Pseudo Genes (ambiguous residues) :: 0 of 32
            Pseudo Genes (frameshifted)       :: 11 of 32
            Pseudo Genes (incomplete)         :: 26 of 32
            Pseudo Genes (internal stop)      :: 2 of 32
            Pseudo Genes (multiple problems)  :: 5 of 32
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6257979
                     /organism="Nocardiopsis sp. iso_238"
                     /mol_type="genomic DNA"
                     /strain="iso_238"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569829"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBUM010000001-JBWBUM010000002
WGS_SCAFLD  NZ_CM149668
WGS_SCAFLD  NZ_JBWBUM010000002
//
LOCUS       NZ_JBJKNQ010000000   6227251 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PA4, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKNQ000000000
VERSION     NZ_JBJKNQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45049791
            Assembly: GCF_045786825.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6227251)
  AUTHORS   Zhang,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) Department of Clinical Microbiology, First
            Affiliated Hospital of Nanchang University, Nanchang University,
            Nanchang, Yong wai zheng jie No. 17, Nanchang 330006, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKNQ000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JBJKNQ000000000.  This version of the
            project (01) has the accession number NZ_JBJKNQ010000000, and
            consists of sequences JBJKNQ010000001-JBJKNQ010000053.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. 1.2.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1045.0x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045786825.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:49:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,849
            CDSs (total)                      :: 5,785
            Genes (coding)                    :: 5,719
            CDSs (with protein)               :: 5,719
            Genes (RNA)                       :: 64
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 66
            CDSs (without protein)            :: 66
            Pseudo Genes (ambiguous residues) :: 0 of 66
            Pseudo Genes (frameshifted)       :: 11 of 66
            Pseudo Genes (incomplete)         :: 55 of 66
            Pseudo Genes (internal stop)      :: 3 of 66
            Pseudo Genes (multiple problems)  :: 3 of 66
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6227251
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PA4"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="China: Nanchang"
                     /collection_date="2021/2022"
WGS         JBJKNQ010000001-JBJKNQ010000053
WGS_SCAFLD  NZ_JBJKNQ010000001-NZ_JBJKNQ010000053
//
LOCUS       NZ_JAIXII010000000   6761632 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-48, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXII000000000
VERSION     NZ_JAIXII000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906764
            Assembly: GCF_045794805.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6761632)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6761632)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXII000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXII000000000.  This version of the
            project (01) has the accession number NZ_JAIXII010000000, and
            consists of sequences JAIXII010000001-JAIXII010000170.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 54x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045794805.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:07:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,427
            CDSs (total)                      :: 6,363
            Genes (coding)                    :: 6,247
            CDSs (with protein)               :: 6,247
            Genes (RNA)                       :: 64
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 116
            CDSs (without protein)            :: 116
            Pseudo Genes (ambiguous residues) :: 0 of 116
            Pseudo Genes (frameshifted)       :: 23 of 116
            Pseudo Genes (incomplete)         :: 95 of 116
            Pseudo Genes (internal stop)      :: 5 of 116
            Pseudo Genes (multiple problems)  :: 6 of 116
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6761632
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-48"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2020"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXII010000001-JAIXII010000170
WGS_SCAFLD  NZ_JAIXII010000001-NZ_JAIXII010000170
//
LOCUS       NZ_JAIXJB010000000   6838619 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-29, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXJB000000000
VERSION     NZ_JAIXJB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906745
            Assembly: GCF_045795145.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6838619)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6838619)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXJB000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXJB000000000.  This version of the
            project (01) has the accession number NZ_JAIXJB010000000, and
            consists of sequences JAIXJB010000001-JAIXJB010000178.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 159x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795145.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:03:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,533
            CDSs (total)                      :: 6,463
            Genes (coding)                    :: 6,342
            CDSs (with protein)               :: 6,342
            Genes (RNA)                       :: 70
            rRNAs                             :: 1, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 121
            CDSs (without protein)            :: 121
            Pseudo Genes (ambiguous residues) :: 0 of 121
            Pseudo Genes (frameshifted)       :: 32 of 121
            Pseudo Genes (incomplete)         :: 93 of 121
            Pseudo Genes (internal stop)      :: 5 of 121
            Pseudo Genes (multiple problems)  :: 9 of 121
            CRISPR Arrays                     :: 4
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6838619
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-29"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2015"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXJB010000001-JAIXJB010000178
WGS_SCAFLD  NZ_JAIXJB010000001-NZ_JAIXJB010000178
//
LOCUS       NZ_JAIXIZ010000000   6880615 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-31, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXIZ000000000
VERSION     NZ_JAIXIZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906747
            Assembly: GCF_045795085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6880615)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6880615)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXIZ000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXIZ000000000.  This version of the
            project (01) has the accession number NZ_JAIXIZ010000000, and
            consists of sequences JAIXIZ010000001-JAIXIZ010000086.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 129x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795085.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:59:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,441
            CDSs (total)                      :: 6,379
            Genes (coding)                    :: 6,306
            CDSs (with protein)               :: 6,306
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 73
            CDSs (without protein)            :: 73
            Pseudo Genes (ambiguous residues) :: 0 of 73
            Pseudo Genes (frameshifted)       :: 15 of 73
            Pseudo Genes (incomplete)         :: 56 of 73
            Pseudo Genes (internal stop)      :: 5 of 73
            Pseudo Genes (multiple problems)  :: 3 of 73
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6880615
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-31"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2016"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXIZ010000001-JAIXIZ010000086
WGS_SCAFLD  NZ_JAIXIZ010000001-NZ_JAIXIZ010000086
//
LOCUS       NZ_JAIXJD010000000   6923340 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-27, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXJD000000000
VERSION     NZ_JAIXJD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906743
            Assembly: GCF_045795185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6923340)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6923340)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXJD000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXJD000000000.  This version of the
            project (01) has the accession number NZ_JAIXJD010000000, and
            consists of sequences JAIXJD010000001-JAIXJD010000286.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 168x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795185.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:59:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,713
            CDSs (total)                      :: 6,646
            Genes (coding)                    :: 6,498
            CDSs (with protein)               :: 6,498
            Genes (RNA)                       :: 67
            rRNAs                             :: 1, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 56
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 148
            CDSs (without protein)            :: 148
            Pseudo Genes (ambiguous residues) :: 0 of 148
            Pseudo Genes (frameshifted)       :: 22 of 148
            Pseudo Genes (incomplete)         :: 131 of 148
            Pseudo Genes (internal stop)      :: 7 of 148
            Pseudo Genes (multiple problems)  :: 11 of 148
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6923340
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-27"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2015"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXJD010000001-JAIXJD010000286
WGS_SCAFLD  NZ_JAIXJD010000001-NZ_JAIXJD010000286
//
LOCUS       NZ_DASQZC010000000   7142095 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Nostoc sp. isolate SMAG_U11081, whole genome shotgun
            sequencing project.
ACCESSION   NZ_DASQZC000000000
VERSION     NZ_DASQZC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37946558
            Sequence Read Archive: SRR6048907
            Assembly: GCF_035638895.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq; TPA:assembly.
SOURCE      Nostoc sp. (soil metagenome)
  ORGANISM  Nostoc sp.
            Bacteria; Bacillati; Cyanobacteriota; Cyanophyceae; Nostocales;
            Nostocaceae; Nostoc.
REFERENCE   1  (bases 1 to 7142095)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. doi:
            10.1038/s41467-023-44072-7. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7142095)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            DASQZC000000000.1.
            The Nostoc sp. whole genome shotgun (WGS) project has the project
            accession NZ_DASQZC000000000.  This version of the project (01) has
            the accession number NZ_DASQZC010000000, and consists of sequences
            DASQZC010000001-DASQZC010000717.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_035638895.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:54:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,821
            CDSs (total)                      :: 6,723
            Genes (coding)                    :: 6,393
            CDSs (with protein)               :: 6,393
            Genes (RNA)                       :: 98
            rRNAs                             :: 2, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 331
            CDSs (without protein)            :: 330
            Pseudo Genes (ambiguous residues) :: 0 of 331
            Pseudo Genes (frameshifted)       :: 55 of 331
            Pseudo Genes (incomplete)         :: 287 of 331
            Pseudo Genes (internal stop)      :: 40 of 331
            Pseudo Genes (multiple problems)  :: 46 of 331
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7142095
                     /organism="Nostoc sp."
                     /mol_type="genomic DNA"
                     /isolate="SMAG_U11081"
                     /isolation_source="soil"
                     /db_xref="taxon:1180"
                     /environmental_sample
                     /geo_loc_name="Peru: Puca Glacier chronosequence"
                     /lat_lon="13.77333333 S 71.07138889 W"
                     /metagenome_source="soil metagenome"
                     /metagenomic
WGS         DASQZC010000001-DASQZC010000717
WGS_SCAFLD  NZ_DASQZC010000001-NZ_DASQZC010000717
//
LOCUS       NZ_JAIXJJ010000000   7477642 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-21, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXJJ000000000
VERSION     NZ_JAIXJJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906737
            Assembly: GCF_045795345.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7477642)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7477642)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXJJ000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXJJ000000000.  This version of the
            project (01) has the accession number NZ_JAIXJJ010000000, and
            consists of sequences JAIXJJ010000001-JAIXJJ010000223.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 97x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795345.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:15:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,227
            CDSs (total)                      :: 7,156
            Genes (coding)                    :: 7,037
            CDSs (with protein)               :: 7,037
            Genes (RNA)                       :: 71
            rRNAs                             :: 1, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 119
            CDSs (without protein)            :: 119
            Pseudo Genes (ambiguous residues) :: 0 of 119
            Pseudo Genes (frameshifted)       :: 26 of 119
            Pseudo Genes (incomplete)         :: 94 of 119
            Pseudo Genes (internal stop)      :: 8 of 119
            Pseudo Genes (multiple problems)  :: 7 of 119
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7477642
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-21"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2014"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXJJ010000001-JAIXJJ010000223
WGS_SCAFLD  NZ_JAIXJJ010000001-NZ_JAIXJJ010000223
//
LOCUS       NZ_JAIXJV010000000   6690440 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-09, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXJV000000000
VERSION     NZ_JAIXJV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906725
            Assembly: GCF_045795565.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6690440)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6690440)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXJV000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXJV000000000.  This version of the
            project (01) has the accession number NZ_JAIXJV010000000, and
            consists of sequences JAIXJV010000001-JAIXJV010000234.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 89x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795565.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:20:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,439
            CDSs (total)                      :: 6,376
            Genes (coding)                    :: 6,220
            CDSs (with protein)               :: 6,220
            Genes (RNA)                       :: 63
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 156
            CDSs (without protein)            :: 156
            Pseudo Genes (ambiguous residues) :: 0 of 156
            Pseudo Genes (frameshifted)       :: 19 of 156
            Pseudo Genes (incomplete)         :: 139 of 156
            Pseudo Genes (internal stop)      :: 5 of 156
            Pseudo Genes (multiple problems)  :: 6 of 156
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6690440
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-09"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2010"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXJV010000001-JAIXJV010000234
WGS_SCAFLD  NZ_JAIXJV010000001-NZ_JAIXJV010000234
//
LOCUS       NZ_VFPU01000000      3437881 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Ornithinimicrobium humiphilum strain DSM 12362, whole genome
            shotgun sequencing project.
ACCESSION   NZ_VFPU00000000
VERSION     NZ_VFPU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11512329
            Assembly: GCF_006716885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ornithinimicrobium humiphilum
  ORGANISM  Ornithinimicrobium humiphilum
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (bases 1 to 3437881)
  AUTHORS   Klenk,H.-P.
  TITLE     Sequencing the genomes of 1000 actinobacteria strains
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3437881)
  AUTHORS   Klenk,H.-P., Huntemann,M., Clum,A., Pillay,M., Palaniappan,K.,
            Varghese,N., Mikhailova,N., Stamatis,D., Reddy,T., Daum,C.,
            Shapiro,N., Ivanova,N., Kyrpides,N. and Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-JUN-2019) Prokaryotic Super Group, DOE Joint Genome
            Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VFPU00000000.1.
            The Ornithinimicrobium humiphilum whole genome shotgun (WGS)
            project has the project accession NZ_VFPU00000000.  This version of
            the project (01) has the accession number NZ_VFPU01000000, and
            consists of sequences VFPU01000001-VFPU01000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: HGAP v. smrtlink/6.0.0.47835, HGAP 4
                                      (0.2.1)
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 335.0x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_006716885.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:09:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,285
            CDSs (total)                      :: 3,218
            Genes (coding)                    :: 3,185
            CDSs (with protein)               :: 3,185
            Genes (RNA)                       :: 67
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 33
            CDSs (without protein)            :: 33
            Pseudo Genes (ambiguous residues) :: 0 of 33
            Pseudo Genes (frameshifted)       :: 9 of 33
            Pseudo Genes (incomplete)         :: 25 of 33
            Pseudo Genes (internal stop)      :: 0 of 33
            Pseudo Genes (multiple problems)  :: 1 of 33
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3437881
                     /organism="Ornithinimicrobium humiphilum"
                     /mol_type="genomic DNA"
                     /strain="DSM 12362"
                     /culture_collection="DSM:12362"
                     /type_material="type strain of Ornithinimicrobium
                     humiphilum"
                     /db_xref="taxon:125288"
WGS         VFPU01000001-VFPU01000005
WGS_SCAFLD  NZ_VFPU01000001-NZ_VFPU01000005
//
LOCUS       NZ_JBHOAB010000000   7094207 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain DGLTL8, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBHOAB000000000
VERSION     NZ_JBHOAB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43881915
            Assembly: GCF_045797925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7094207)
  AUTHORS   Rathod,M. and Gajjar,D.
  TITLE     Whole Genome Sequencing of pathogenic Pseudomonas aeruginosa from
            Western part of India
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7094207)
  AUTHORS   Rathod,M. and Gajjar,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-SEP-2024) Department of Microbiology and
            Biotechnology Centre, The Maharaja Sayajirao University of Baroda,
            Pratapgunj, Vadodara 390002, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBHOAB000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JBHOAB000000000.  This version of the
            project (01) has the accession number NZ_JBHOAB010000000, and
            consists of sequences JBHOAB010000001-JBHOAB010000181.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2021
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797925.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:35:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,822
            CDSs (total)                      :: 6,748
            Genes (coding)                    :: 6,608
            CDSs (with protein)               :: 6,608
            Genes (RNA)                       :: 74
            rRNAs                             :: 3, 2, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 2 (5S, 16S)
            partial rRNAs                     :: 2, 4 (5S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 140
            CDSs (without protein)            :: 140
            Pseudo Genes (ambiguous residues) :: 0 of 140
            Pseudo Genes (frameshifted)       :: 29 of 140
            Pseudo Genes (incomplete)         :: 116 of 140
            Pseudo Genes (internal stop)      :: 4 of 140
            Pseudo Genes (multiple problems)  :: 9 of 140
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7094207
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="DGLTL8"
                     /isolation_source="ear infection"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="India: Gujarat"
                     /collection_date="2021"
                     /collected_by="Milan Rathod"
WGS         JBHOAB010000001-JBHOAB010000181
WGS_SCAFLD  NZ_JBHOAB010000001-NZ_JBHOAB010000181
//
LOCUS       NZ_JBHLUW010000000   7500177 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Paraburkholderia rhizosphaerae strain NCAIM B.02541, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JBHLUW000000000
VERSION     NZ_JBHLUW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43281578
            Assembly: GCF_042433665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paraburkholderia rhizosphaerae
  ORGANISM  Paraburkholderia rhizosphaerae
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Burkholderiaceae; Paraburkholderia.
REFERENCE   1  (bases 1 to 7500177)
  AUTHORS   Sun,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-SEP-2024) WFCC-MIRCEN World Data Centre for
            Microorganisms (WDCM), The Institute of Microbiology of the Chinese
            Academy of Sciences, No. 1 Beichen West Road, Chaoyang Disct,
            Beijing 100101, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBHLUW000000000.1.
            The Paraburkholderia rhizosphaerae whole genome shotgun (WGS)
            project has the project accession NZ_JBHLUW000000000.  This version
            of the project (01) has the accession number NZ_JBHLUW010000000,
            and consists of sequences JBHLUW010000001-JBHLUW010000077.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. v2.04; SPAdes v. v3.13.0;
                                      Velvet v. v1.2.10; Platanus-b v. v1.2.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_042433665.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:16:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,754
            CDSs (total)                      :: 6,697
            Genes (coding)                    :: 6,553
            CDSs (with protein)               :: 6,553
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 144
            CDSs (without protein)            :: 144
            Pseudo Genes (ambiguous residues) :: 0 of 144
            Pseudo Genes (frameshifted)       :: 37 of 144
            Pseudo Genes (incomplete)         :: 127 of 144
            Pseudo Genes (internal stop)      :: 7 of 144
            Pseudo Genes (multiple problems)  :: 26 of 144
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7500177
                     /organism="Paraburkholderia rhizosphaerae"
                     /mol_type="genomic DNA"
                     /strain="NCAIM B.02541"
                     /db_xref="taxon:480658"
                     /collection_date="2020"
WGS         JBHLUW010000001-JBHLUW010000077
WGS_SCAFLD  NZ_JBHLUW010000001-NZ_JBHLUW010000077
//
LOCUS       NZ_JBJKNR010000000   7369942 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PA5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJKNR000000000
VERSION     NZ_JBJKNR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45049793
            Assembly: GCF_045786775.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7369942)
  AUTHORS   Zhang,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2024) Department of Clinical Microbiology, First
            Affiliated Hospital of Nanchang University, Nanchang University,
            Nanchang, Yong wai zheng jie No. 17, Nanchang 330006, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJKNR000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JBJKNR000000000.  This version of the
            project (01) has the accession number NZ_JBJKNR010000000, and
            consists of sequences JBJKNR010000001-JBJKNR010000127.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. 1.2.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1198.0x
            Sequencing Technology  :: DNBSEQ-T7
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045786775.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:09:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,201
            CDSs (total)                      :: 7,134
            Genes (coding)                    :: 7,039
            CDSs (with protein)               :: 7,039
            Genes (RNA)                       :: 67
            rRNAs                             :: 1, 1 (16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 95
            CDSs (without protein)            :: 95
            Pseudo Genes (ambiguous residues) :: 0 of 95
            Pseudo Genes (frameshifted)       :: 8 of 95
            Pseudo Genes (incomplete)         :: 88 of 95
            Pseudo Genes (internal stop)      :: 2 of 95
            Pseudo Genes (multiple problems)  :: 3 of 95
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7369942
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PA5"
                     /isolation_source="cerebrospinal fluid"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="China: Nanchang"
                     /collection_date="2021/2022"
WGS         JBJKNR010000001-JBJKNR010000127
WGS_SCAFLD  NZ_JBJKNR010000001-NZ_JBJKNR010000127
//
LOCUS       NZ_JAIXJG010000000   7151408 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-24, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXJG000000000
VERSION     NZ_JAIXJG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906740
            Assembly: GCF_045795245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7151408)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7151408)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXJG000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXJG000000000.  This version of the
            project (01) has the accession number NZ_JAIXJG010000000, and
            consists of sequences JAIXJG010000001-JAIXJG010000129.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 249x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795245.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:16:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,880
            CDSs (total)                      :: 6,809
            Genes (coding)                    :: 6,685
            CDSs (with protein)               :: 6,685
            Genes (RNA)                       :: 71
            rRNAs                             :: 1, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 125
            CDSs (without protein)            :: 124
            Pseudo Genes (ambiguous residues) :: 0 of 125
            Pseudo Genes (frameshifted)       :: 30 of 125
            Pseudo Genes (incomplete)         :: 98 of 125
            Pseudo Genes (internal stop)      :: 6 of 125
            Pseudo Genes (multiple problems)  :: 8 of 125
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7151408
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-24"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2015"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXJG010000001-JAIXJG010000129
WGS_SCAFLD  NZ_JAIXJG010000001-NZ_JAIXJG010000129
//
LOCUS       NZ_JAIXJR010000000   7033162 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-13, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXJR000000000
VERSION     NZ_JAIXJR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906729
            Assembly: GCF_045795405.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7033162)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7033162)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXJR000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXJR000000000.  This version of the
            project (01) has the accession number NZ_JAIXJR010000000, and
            consists of sequences JAIXJR010000001-JAIXJR010000139.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 60x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795405.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:20:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,846
            CDSs (total)                      :: 6,775
            Genes (coding)                    :: 6,656
            CDSs (with protein)               :: 6,656
            Genes (RNA)                       :: 71
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 119
            CDSs (without protein)            :: 119
            Pseudo Genes (ambiguous residues) :: 0 of 119
            Pseudo Genes (frameshifted)       :: 22 of 119
            Pseudo Genes (incomplete)         :: 95 of 119
            Pseudo Genes (internal stop)      :: 9 of 119
            Pseudo Genes (multiple problems)  :: 5 of 119
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7033162
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-13"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2012"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXJR010000001-JAIXJR010000139
WGS_SCAFLD  NZ_JAIXJR010000001-NZ_JAIXJR010000139
//
LOCUS       NZ_JBHNZT010000000   6858237 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain DGLJ20, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBHNZT000000000
VERSION     NZ_JBHNZT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43881907
            Assembly: GCF_045798225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6858237)
  AUTHORS   Rathod,M. and Gajjar,D.
  TITLE     Whole Genome Sequencing of pathogenic Pseudomonas aeruginosa from
            Western part of India
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6858237)
  AUTHORS   Rathod,M. and Gajjar,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-SEP-2024) Department of Microbiology and
            Biotechnology Centre, The Maharaja Sayajirao University of Baroda,
            Pratapgunj, Vadodara 390002, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBHNZT000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JBHNZT000000000.  This version of the
            project (01) has the accession number NZ_JBHNZT010000000, and
            consists of sequences JBHNZT010000001-JBHNZT010000154.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2022
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045798225.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:40:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,553
            CDSs (total)                      :: 6,490
            Genes (coding)                    :: 6,346
            CDSs (with protein)               :: 6,346
            Genes (RNA)                       :: 63
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 144
            CDSs (without protein)            :: 144
            Pseudo Genes (ambiguous residues) :: 0 of 144
            Pseudo Genes (frameshifted)       :: 22 of 144
            Pseudo Genes (incomplete)         :: 127 of 144
            Pseudo Genes (internal stop)      :: 4 of 144
            Pseudo Genes (multiple problems)  :: 8 of 144
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6858237
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="DGLJ20"
                     /isolation_source="pus swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="India: Rajasthan"
                     /collection_date="2022"
                     /collected_by="Milan Rathod"
WGS         JBHNZT010000001-JBHNZT010000154
WGS_SCAFLD  NZ_JBHNZT010000001-NZ_JBHNZT010000154
//
LOCUS       NZ_JALKLI010000000   4948203 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pantoea ananatis strain 99-5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JALKLI000000000
VERSION     NZ_JALKLI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN27527394
            Assembly: GCF_029086635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea ananatis
  ORGANISM  Pantoea ananatis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea.
REFERENCE   1  (bases 1 to 4948203)
  AUTHORS   Myers,B.K., Shin,G.Y., Agarwal,G., Stice,S.P., Gitaitis,R.D.,
            Kvitko,B.H. and Dutta,B.
  TITLE     Genome-wide association and dissociation studies in Pantoea
            ananatis reveal potential virulence factors affecting Allium porrum
            and Allium fistulosum x Allium cepa hybrid
  JOURNAL   Front Microbiol 13, 1094155 (2023)
   PUBMED   36817114
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4948203)
  AUTHORS   Myers,B.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-APR-2022) Plant Pathology, University of Georgia,
            2806 Rebecca Rd, Tifton, GA 31794, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JALKLI000000000.1.
            The Pantoea ananatis whole genome shotgun (WGS) project has the
            project accession NZ_JALKLI000000000.  This version of the project
            (01) has the accession number NZ_JALKLI010000000, and consists of
            sequences JALKLI010000001-JALKLI010000033.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 10-20x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_029086635.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:55:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,632
            CDSs (total)                      :: 4,555
            Genes (coding)                    :: 4,469
            CDSs (with protein)               :: 4,469
            Genes (RNA)                       :: 77
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 17
            Pseudo Genes (total)              :: 86
            CDSs (without protein)            :: 86
            Pseudo Genes (ambiguous residues) :: 0 of 86
            Pseudo Genes (frameshifted)       :: 39 of 86
            Pseudo Genes (incomplete)         :: 49 of 86
            Pseudo Genes (internal stop)      :: 26 of 86
            Pseudo Genes (multiple problems)  :: 25 of 86
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4948203
                     /organism="Pantoea ananatis"
                     /mol_type="genomic DNA"
                     /strain="99-5"
                     /host="Glandularia bipinnatifida"
                     /db_xref="taxon:553"
                     /geo_loc_name="USA: Tift Co. GA"
                     /collection_date="1999"
WGS         JALKLI010000001-JALKLI010000033
WGS_SCAFLD  NZ_JALKLI010000001-NZ_JALKLI010000033
//
LOCUS       NZ_QXND01000000      2264386 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Rodentibacter pneumotropicus strain 394_12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QXND00000000
VERSION     NZ_QXND00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09983105
            Assembly: GCF_004795445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Rodentibacter pneumotropicus
  ORGANISM  Rodentibacter pneumotropicus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Rodentibacter.
REFERENCE   1  (bases 1 to 2264386)
  AUTHORS   Adhikary,S., Bisgaard,M., Boot,R., Benga,L., Nicklas,W. and
            Christensen,H.
  TITLE     Development of multi locus sequence typing (MLST) of Rodentibacter
            pneumotropicus
  JOURNAL   Vet Microbiol 231, 11-17 (2019)
   PUBMED   30955797
REFERENCE   2  (bases 1 to 2264386)
  AUTHORS   Christensen,H., Benga,L. and Adhikary,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2018) Veterinary Animal Sciences, University of
            Copenhagen, Stigbojlen 4, Frederiksberg, MI 1870 C, Denmark
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QXND00000000.1.
            The Rodentibacter pneumotropicus whole genome shotgun (WGS) project
            has the project accession NZ_QXND00000000.  This version of the
            project (01) has the accession number NZ_QXND01000000, and consists
            of sequences QXND01000001-QXND01000152.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 48.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004795445.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:51:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,193
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 2,077
            CDSs (with protein)               :: 2,077
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 1, 2 (5S, 16S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 62
            CDSs (without protein)            :: 62
            Pseudo Genes (ambiguous residues) :: 0 of 62
            Pseudo Genes (frameshifted)       :: 18 of 62
            Pseudo Genes (incomplete)         :: 50 of 62
            Pseudo Genes (internal stop)      :: 5 of 62
            Pseudo Genes (multiple problems)  :: 9 of 62
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2264386
                     /organism="Rodentibacter pneumotropicus"
                     /mol_type="genomic DNA"
                     /strain="394_12"
                     /host="mouse"
                     /db_xref="taxon:758"
                     /geo_loc_name="Germany"
                     /collection_date="2012"
WGS         QXND01000001-QXND01000152
WGS_SCAFLD  NZ_QXND01000001-NZ_QXND01000152
//
LOCUS       NZ_JBJNSL010000000   7198220 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain LACPHL-BACT-2024-00408, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JBJNSL000000000
VERSION     NZ_JBJNSL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45066716
            Assembly: GCF_045886075.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7198220)
  AUTHORS   Fox,E.B., Garrigues,J.M. and Green,N.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2024) Los Angeles County Public Health
            Laboratories, Los Angeles County Public Health Lab microbial
            pathogen submission group, 12750 Erickson Avenue, Downey, CA 90242,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJNSL000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JBJNSL000000000.  This version of the
            project (01) has the accession number NZ_JBJNSL010000000, and
            consists of sequences JBJNSL010000001-JBJNSL010000149.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill-SKESA v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 65.58x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045886075.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 14:23:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,877
            CDSs (total)                      :: 6,811
            Genes (coding)                    :: 6,716
            CDSs (with protein)               :: 6,716
            Genes (RNA)                       :: 66
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 95
            CDSs (without protein)            :: 95
            Pseudo Genes (ambiguous residues) :: 0 of 95
            Pseudo Genes (frameshifted)       :: 24 of 95
            Pseudo Genes (incomplete)         :: 73 of 95
            Pseudo Genes (internal stop)      :: 8 of 95
            Pseudo Genes (multiple problems)  :: 8 of 95
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7198220
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="LACPHL-BACT-2024-00408"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="USA: California"
                     /collection_date="2024-08-26"
WGS         JBJNSL010000001-JBJNSL010000149
WGS_SCAFLD  NZ_JBJNSL010000001-NZ_JBJNSL010000149
//
LOCUS       NZ_QXNF01000000      2273287 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Rodentibacter pneumotropicus strain FD1189, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QXNF00000000
VERSION     NZ_QXNF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09983726
            Assembly: GCF_004795305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Rodentibacter pneumotropicus
  ORGANISM  Rodentibacter pneumotropicus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Rodentibacter.
REFERENCE   1  (bases 1 to 2273287)
  AUTHORS   Adhikary,S., Bisgaard,M., Boot,R., Benga,L., Nicklas,W. and
            Christensen,H.
  TITLE     Development of multi locus sequence typing (MLST) of Rodentibacter
            pneumotropicus
  JOURNAL   Vet Microbiol 231, 11-17 (2019)
   PUBMED   30955797
REFERENCE   2  (bases 1 to 2273287)
  AUTHORS   Christensen,H., Benga,L. and Adhikary,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2018) Veterinary Animal Sciences, University of
            Copenhagen, Stigbojlen 4, Frederiksberg, MI 1870 C, Denmark
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QXNF00000000.1.
            The Rodentibacter pneumotropicus whole genome shotgun (WGS) project
            has the project accession NZ_QXNF00000000.  This version of the
            project (01) has the accession number NZ_QXNF01000000, and consists
            of sequences QXNF01000001-QXNF01000126.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 40.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004795305.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:51:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,138
            Genes (coding)                    :: 2,061
            CDSs (with protein)               :: 2,061
            Genes (RNA)                       :: 48
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 77
            CDSs (without protein)            :: 77
            Pseudo Genes (ambiguous residues) :: 0 of 77
            Pseudo Genes (frameshifted)       :: 22 of 77
            Pseudo Genes (incomplete)         :: 56 of 77
            Pseudo Genes (internal stop)      :: 14 of 77
            Pseudo Genes (multiple problems)  :: 14 of 77
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2273287
                     /organism="Rodentibacter pneumotropicus"
                     /mol_type="genomic DNA"
                     /strain="FD1189"
                     /host="mouse"
                     /db_xref="taxon:758"
                     /geo_loc_name="Australia"
                     /collection_date="1989"
WGS         QXNF01000001-QXNF01000126
WGS_SCAFLD  NZ_QXNF01000001-NZ_QXNF01000126
//
LOCUS       NZ_QXNH01000000      2339630 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Rodentibacter pneumotropicus strain 607_10, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QXNH00000000
VERSION     NZ_QXNH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09983952
            Assembly: GCF_004795335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Rodentibacter pneumotropicus
  ORGANISM  Rodentibacter pneumotropicus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Rodentibacter.
REFERENCE   1  (bases 1 to 2339630)
  AUTHORS   Adhikary,S., Bisgaard,M., Boot,R., Benga,L., Nicklas,W. and
            Christensen,H.
  TITLE     Development of multi locus sequence typing (MLST) of Rodentibacter
            pneumotropicus
  JOURNAL   Vet Microbiol 231, 11-17 (2019)
   PUBMED   30955797
REFERENCE   2  (bases 1 to 2339630)
  AUTHORS   Christensen,H., Benga,L. and Adhikary,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2018) Veterinary Animal Sciences, University of
            Copenhagen, Stigbojlen 4, Frederiksberg, MI 1870 C, Denmark
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QXNH00000000.1.
            The Rodentibacter pneumotropicus whole genome shotgun (WGS) project
            has the project accession NZ_QXNH00000000.  This version of the
            project (01) has the accession number NZ_QXNH01000000, and consists
            of sequences QXNH01000001-QXNH01000120.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 41.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004795335.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:55:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,273
            CDSs (total)                      :: 2,226
            Genes (coding)                    :: 2,154
            CDSs (with protein)               :: 2,154
            Genes (RNA)                       :: 47
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 72
            CDSs (without protein)            :: 72
            Pseudo Genes (ambiguous residues) :: 0 of 72
            Pseudo Genes (frameshifted)       :: 21 of 72
            Pseudo Genes (incomplete)         :: 53 of 72
            Pseudo Genes (internal stop)      :: 14 of 72
            Pseudo Genes (multiple problems)  :: 15 of 72
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2339630
                     /organism="Rodentibacter pneumotropicus"
                     /mol_type="genomic DNA"
                     /strain="607_10"
                     /host="mouse"
                     /db_xref="taxon:758"
                     /geo_loc_name="Germany"
                     /collection_date="2010"
WGS         QXNH01000001-QXNH01000120
WGS_SCAFLD  NZ_QXNH01000001-NZ_QXNH01000120
//
LOCUS       NZ_VFXM01000000      3334262 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Ornithinimicrobium kibberense strain DSM 17687, whole genome
            shotgun sequencing project.
ACCESSION   NZ_VFXM00000000
VERSION     NZ_VFXM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12084235
            Assembly: GCF_006519705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ornithinimicrobium kibberense
  ORGANISM  Ornithinimicrobium kibberense
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Ornithinimicrobiaceae; Ornithinimicrobium.
REFERENCE   1  (bases 1 to 3334262)
  AUTHORS   Fang,X.
  TITLE     Ornithinimicrobium cerasum sp. nov., isolated from the fruit of
            Cerasus pseudocerasus
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3334262)
  AUTHORS   Fang,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JUN-2019) Institute of Medicinal Biotechnology,
            Chinese Academy of Medical Sciences & Peking Union Medical College,
            No. 1 Tiantan Xi Li, Dongcheng District, Beijing 100050, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VFXM00000000.1.
            The Ornithinimicrobium kibberense whole genome shotgun (WGS)
            project has the project accession NZ_VFXM00000000.  This version of
            the project (01) has the accession number NZ_VFXM01000000, and
            consists of sequences VFXM01000001-VFXM01000060.
            Bacteria and source DNA available from Institute of Medicinal
            Biotechnology,  Chinese Academy of Medical Sciences & Peking Union
            Medical College.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 5.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_006519705.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:46:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,156
            CDSs (total)                      :: 3,105
            Genes (coding)                    :: 3,078
            CDSs (with protein)               :: 3,078
            Genes (RNA)                       :: 51
            rRNAs                             :: 2, 1 (16S, 23S)
            partial rRNAs                     :: 2, 1 (16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 27
            CDSs (without protein)            :: 27
            Pseudo Genes (ambiguous residues) :: 0 of 27
            Pseudo Genes (frameshifted)       :: 8 of 27
            Pseudo Genes (incomplete)         :: 21 of 27
            Pseudo Genes (internal stop)      :: 1 of 27
            Pseudo Genes (multiple problems)  :: 3 of 27
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3334262
                     /organism="Ornithinimicrobium kibberense"
                     /mol_type="genomic DNA"
                     /strain="DSM 17687"
                     /isolation_source="activated sludge"
                     /culture_collection="DSM:17687"
                     /type_material="type strain of Ornithinimicrobium
                     kibberense"
                     /db_xref="taxon:282060"
                     /geo_loc_name="Germany"
                     /collection_date="2010-12-01"
WGS         VFXM01000001-VFXM01000060
WGS_SCAFLD  NZ_VFXM01000001-NZ_VFXM01000060
//
LOCUS       NZ_JAIXJS010000000   7011917 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXJS000000000
VERSION     NZ_JAIXJS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906728
            Assembly: GCF_045795485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7011917)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7011917)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXJS000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXJS000000000.  This version of the
            project (01) has the accession number NZ_JAIXJS010000000, and
            consists of sequences JAIXJS010000001-JAIXJS010000431.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 15x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795485.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:16:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,885
            CDSs (total)                      :: 6,820
            Genes (coding)                    :: 6,608
            CDSs (with protein)               :: 6,608
            Genes (RNA)                       :: 65
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 212
            CDSs (without protein)            :: 212
            Pseudo Genes (ambiguous residues) :: 0 of 212
            Pseudo Genes (frameshifted)       :: 17 of 212
            Pseudo Genes (incomplete)         :: 196 of 212
            Pseudo Genes (internal stop)      :: 6 of 212
            Pseudo Genes (multiple problems)  :: 6 of 212
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7011917
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-12"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2012"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXJS010000001-JAIXJS010000431
WGS_SCAFLD  NZ_JAIXJS010000001-NZ_JAIXJS010000431
//
LOCUS       NZ_QXNM01000000      2258895 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Rodentibacter pneumotropicus strain Ppn95, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QXNM00000000
VERSION     NZ_QXNM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09984080
            Assembly: GCF_004795475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Rodentibacter pneumotropicus
  ORGANISM  Rodentibacter pneumotropicus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Rodentibacter.
REFERENCE   1  (bases 1 to 2258895)
  AUTHORS   Adhikary,S., Bisgaard,M., Boot,R., Benga,L., Nicklas,W. and
            Christensen,H.
  TITLE     Development of multi locus sequence typing (MLST) of Rodentibacter
            pneumotropicus
  JOURNAL   Vet Microbiol 231, 11-17 (2019)
   PUBMED   30955797
REFERENCE   2  (bases 1 to 2258895)
  AUTHORS   Christensen,H., Benga,L. and Adhikary,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-SEP-2018) Veterinary Animal Sciences, University of
            Copenhagen, Stigbojlen 4, Frederiksberg, MI 1870 C, Denmark
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QXNM00000000.1.
            The Rodentibacter pneumotropicus whole genome shotgun (WGS) project
            has the project accession NZ_QXNM00000000.  This version of the
            project (01) has the accession number NZ_QXNM01000000, and consists
            of sequences QXNM01000001-QXNM01000188.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 27.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004795475.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:50:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,200
            CDSs (total)                      :: 2,153
            Genes (coding)                    :: 2,102
            CDSs (with protein)               :: 2,102
            Genes (RNA)                       :: 47
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 39
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 13 of 51
            Pseudo Genes (incomplete)         :: 42 of 51
            Pseudo Genes (internal stop)      :: 4 of 51
            Pseudo Genes (multiple problems)  :: 8 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2258895
                     /organism="Rodentibacter pneumotropicus"
                     /mol_type="genomic DNA"
                     /strain="Ppn95"
                     /host="rabbit"
                     /db_xref="taxon:758"
                     /geo_loc_name="Netherlands"
                     /collection_date="1985"
WGS         QXNM01000001-QXNM01000188
WGS_SCAFLD  NZ_QXNM01000001-NZ_QXNM01000188
//
LOCUS       NZ_JBWBUL010000000   6751733 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Nocardiopsis sp. iso_25, whole genome shotgun sequencing project.
ACCESSION   NZ_JBWBUL000000000
VERSION     NZ_JBWBUL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449770
            Assembly: GCF_056173305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Nocardiopsis sp. iso_25
  ORGANISM  Nocardiopsis sp. iso_25
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Streptosporangiales; Nocardiopsidaceae; Nocardiopsis.
REFERENCE   1  (bases 1 to 6751733)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6751733)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBUL000000000.1.
            The Nocardiopsis sp. iso_25 whole genome shotgun (WGS) project has
            the project accession NZ_JBWBUL000000000.  This version of the
            project (01) has the accession number NZ_JBWBUL010000000, and
            consists of sequence JBWBUL010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 149.6x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173305.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:51:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,765
            CDSs (total)                      :: 5,691
            Genes (coding)                    :: 5,635
            CDSs (with protein)               :: 5,635
            Genes (RNA)                       :: 74
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 56
            CDSs (without protein)            :: 56
            Pseudo Genes (ambiguous residues) :: 0 of 56
            Pseudo Genes (frameshifted)       :: 17 of 56
            Pseudo Genes (incomplete)         :: 42 of 56
            Pseudo Genes (internal stop)      :: 7 of 56
            Pseudo Genes (multiple problems)  :: 10 of 56
            CRISPR Arrays                     :: 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6751733
                     /organism="Nocardiopsis sp. iso_25"
                     /mol_type="genomic DNA"
                     /strain="iso_25"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569830"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBUL010000001
WGS_SCAFLD  NZ_CM149667
//
LOCUS       NZ_JAIXKD010000000   6909869 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-01, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXKD000000000
VERSION     NZ_JAIXKD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906717
            Assembly: GCF_045795755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6909869)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6909869)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXKD000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXKD000000000.  This version of the
            project (01) has the accession number NZ_JAIXKD010000000, and
            consists of sequences JAIXKD010000001-JAIXKD010000128.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 55x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795755.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:16:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,549
            CDSs (total)                      :: 6,484
            Genes (coding)                    :: 6,403
            CDSs (with protein)               :: 6,403
            Genes (RNA)                       :: 65
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 81
            CDSs (without protein)            :: 81
            Pseudo Genes (ambiguous residues) :: 0 of 81
            Pseudo Genes (frameshifted)       :: 16 of 81
            Pseudo Genes (incomplete)         :: 63 of 81
            Pseudo Genes (internal stop)      :: 5 of 81
            Pseudo Genes (multiple problems)  :: 3 of 81
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6909869
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-01"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2006"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXKD010000001-JAIXKD010000128
WGS_SCAFLD  NZ_JAIXKD010000001-NZ_JAIXKD010000128
//
LOCUS       NZ_JAAMCM010000000   5107151 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Rhizobium skierniewicense strain Di1472, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAAMCM000000000
VERSION     NZ_JAAMCM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14165529
            Assembly: GCF_013320815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Rhizobium skierniewicense (Agrobacterium skierniewicense)
  ORGANISM  Rhizobium skierniewicense
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
            Rhizobium.
REFERENCE   1  (bases 1 to 5107151)
  AUTHORS   Weisberg,A.J., Davis,E.W. 2nd, Tabima,J., Belcher,M.S., Miller,M.,
            Kuo,C.H., Loper,J.E., Grunwald,N.J., Putnam,M.L. and Chang,J.H.
  TITLE     Unexpected conservation and global transmission of agrobacterial
            virulence plasmids
  JOURNAL   Science 368 (6495) (2020)
   PUBMED   32499412
REFERENCE   2  (bases 1 to 5107151)
  AUTHORS   Weisberg,A.J., Davis,E.W. II, Tabima,J.R., Belcher,M.S., Miller,M.,
            Kuo,C.-H., Loper,J.E., Grunwald,N.J., Putnam,M.L. and Chang,J.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-FEB-2020) Botany and Plant Pathology, Oregon State
            University, 2082 Cordley Hall, Oregon State University, Corvallis,
            OR 97330, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAAMCM000000000.1.
            The Rhizobium skierniewicense whole genome shotgun (WGS) project
            has the project accession NZ_JAAMCM000000000.  This version of the
            project (01) has the accession number NZ_JAAMCM010000000, and
            consists of sequences JAAMCM010000001-JAAMCM010000059.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 109x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013320815.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:39:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,825
            CDSs (total)                      :: 4,774
            Genes (coding)                    :: 4,667
            CDSs (with protein)               :: 4,667
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 107
            CDSs (without protein)            :: 107
            Pseudo Genes (ambiguous residues) :: 0 of 107
            Pseudo Genes (frameshifted)       :: 45 of 107
            Pseudo Genes (incomplete)         :: 88 of 107
            Pseudo Genes (internal stop)      :: 22 of 107
            Pseudo Genes (multiple problems)  :: 37 of 107
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5107151
                     /organism="Rhizobium skierniewicense"
                     /mol_type="genomic DNA"
                     /strain="Di1472"
                     /host="Leucanthemum"
                     /db_xref="taxon:984260"
WGS         JAAMCM010000001-JAAMCM010000059
WGS_SCAFLD  NZ_JAAMCM010000001-NZ_JAAMCM010000059
//
LOCUS       NZ_JBHNZP010000000   6992165 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain DGL140, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBHNZP000000000
VERSION     NZ_JBHNZP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43881903
            Assembly: GCF_045798365.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6992165)
  AUTHORS   Rathod,M. and Gajjar,D.
  TITLE     Whole Genome Sequencing of pathogenic Pseudomonas aeruginosa from
            Western part of India
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6992165)
  AUTHORS   Rathod,M. and Gajjar,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-SEP-2024) Department of Microbiology and
            Biotechnology Centre, The Maharaja Sayajirao University of Baroda,
            Pratapgunj, Vadodara 390002, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBHNZP000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JBHNZP000000000.  This version of the
            project (01) has the accession number NZ_JBHNZP010000000, and
            consists of sequences JBHNZP010000001-JBHNZP010000116.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2022
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045798365.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:32:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,800
            CDSs (total)                      :: 6,735
            Genes (coding)                    :: 6,610
            CDSs (with protein)               :: 6,610
            Genes (RNA)                       :: 65
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 126
            CDSs (without protein)            :: 125
            Pseudo Genes (ambiguous residues) :: 0 of 126
            Pseudo Genes (frameshifted)       :: 27 of 126
            Pseudo Genes (incomplete)         :: 101 of 126
            Pseudo Genes (internal stop)      :: 2 of 126
            Pseudo Genes (multiple problems)  :: 5 of 126
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6992165
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="DGL140"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="India: Rajasthan"
                     /collection_date="2022"
                     /collected_by="Milan Rathod"
WGS         JBHNZP010000001-JBHNZP010000116
WGS_SCAFLD  NZ_JBHNZP010000001-NZ_JBHNZP010000116
//
LOCUS       NZ_QXNI01000000      2435126 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Rodentibacter pneumotropicus strain Ac84, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QXNI00000000
VERSION     NZ_QXNI00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09983954
            Assembly: GCF_004795285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Rodentibacter pneumotropicus
  ORGANISM  Rodentibacter pneumotropicus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Rodentibacter.
REFERENCE   1  (bases 1 to 2435126)
  AUTHORS   Adhikary,S., Bisgaard,M., Boot,R., Benga,L., Nicklas,W. and
            Christensen,H.
  TITLE     Development of multi locus sequence typing (MLST) of Rodentibacter
            pneumotropicus
  JOURNAL   Vet Microbiol 231, 11-17 (2019)
   PUBMED   30955797
REFERENCE   2  (bases 1 to 2435126)
  AUTHORS   Christensen,H., Benga,L. and Adhikary,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2018) Veterinary Animal Sciences, University of
            Copenhagen, Stigbojlen 4, Frederiksberg, MI 1870 C, Denmark
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QXNI00000000.1.
            The Rodentibacter pneumotropicus whole genome shotgun (WGS) project
            has the project accession NZ_QXNI00000000.  This version of the
            project (01) has the accession number NZ_QXNI01000000, and consists
            of sequences QXNI01000001-QXNI01000115.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 40.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004795285.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:50:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,431
            CDSs (total)                      :: 2,375
            Genes (coding)                    :: 2,302
            CDSs (with protein)               :: 2,302
            Genes (RNA)                       :: 56
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 73
            CDSs (without protein)            :: 73
            Pseudo Genes (ambiguous residues) :: 0 of 73
            Pseudo Genes (frameshifted)       :: 24 of 73
            Pseudo Genes (incomplete)         :: 56 of 73
            Pseudo Genes (internal stop)      :: 10 of 73
            Pseudo Genes (multiple problems)  :: 15 of 73
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2435126
                     /organism="Rodentibacter pneumotropicus"
                     /mol_type="genomic DNA"
                     /strain="Ac84"
                     /host="mouse"
                     /db_xref="taxon:758"
                     /geo_loc_name="Netherlands"
                     /collection_date="1985"
WGS         QXNI01000001-QXNI01000115
WGS_SCAFLD  NZ_QXNI01000001-NZ_QXNI01000115
//
LOCUS       NZ_QXNL01000000      2300448 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Rodentibacter pneumotropicus strain Ppn271, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QXNL00000000
VERSION     NZ_QXNL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09984079
            Assembly: GCF_004795325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Rodentibacter pneumotropicus
  ORGANISM  Rodentibacter pneumotropicus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Rodentibacter.
REFERENCE   1  (bases 1 to 2300448)
  AUTHORS   Adhikary,S., Bisgaard,M., Boot,R., Benga,L., Nicklas,W. and
            Christensen,H.
  TITLE     Development of multi locus sequence typing (MLST) of Rodentibacter
            pneumotropicus
  JOURNAL   Vet Microbiol 231, 11-17 (2019)
   PUBMED   30955797
REFERENCE   2  (bases 1 to 2300448)
  AUTHORS   Christensen,H., Benga,L. and Adhikary,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2018) Veterinary Animal Sciences, University of
            Copenhagen, Stigbojlen 4, Frederiksberg, MI 1870 C, Denmark
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QXNL00000000.1.
            The Rodentibacter pneumotropicus whole genome shotgun (WGS) project
            has the project accession NZ_QXNL00000000.  This version of the
            project (01) has the accession number NZ_QXNL01000000, and consists
            of sequences QXNL01000001-QXNL01000102.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 34.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004795325.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:37:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,224
            CDSs (total)                      :: 2,174
            Genes (coding)                    :: 2,122
            CDSs (with protein)               :: 2,122
            Genes (RNA)                       :: 50
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 17 of 52
            Pseudo Genes (incomplete)         :: 40 of 52
            Pseudo Genes (internal stop)      :: 9 of 52
            Pseudo Genes (multiple problems)  :: 13 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2300448
                     /organism="Rodentibacter pneumotropicus"
                     /mol_type="genomic DNA"
                     /strain="Ppn271"
                     /host="mouse"
                     /db_xref="taxon:758"
                     /geo_loc_name="Netherlands"
                     /collection_date="1985"
WGS         QXNL01000001-QXNL01000102
WGS_SCAFLD  NZ_QXNL01000001-NZ_QXNL01000102
//
LOCUS       NZ_JBWBUJ010000000   7610016 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Paenibacillus sp. QJM3NY_38, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWBUJ000000000
VERSION     NZ_JBWBUJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449772
            Assembly: GCF_056173265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paenibacillus sp. QJM3NY_38
  ORGANISM  Paenibacillus sp. QJM3NY_38
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Paenibacillaceae; Paenibacillus.
REFERENCE   1  (bases 1 to 7610016)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7610016)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBUJ000000000.1.
            The Paenibacillus sp. QJM3NY_38 whole genome shotgun (WGS) project
            has the project accession NZ_JBWBUJ000000000.  This version of the
            project (01) has the accession number NZ_JBWBUJ010000000, and
            consists of sequences JBWBUJ010000001-JBWBUJ010000004.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 66.4x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173265.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 18:49:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,086
            CDSs (total)                      :: 6,980
            Genes (coding)                    :: 6,876
            CDSs (with protein)               :: 6,876
            Genes (RNA)                       :: 106
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 104
            CDSs (without protein)            :: 104
            Pseudo Genes (ambiguous residues) :: 0 of 104
            Pseudo Genes (frameshifted)       :: 49 of 104
            Pseudo Genes (incomplete)         :: 61 of 104
            Pseudo Genes (internal stop)      :: 18 of 104
            Pseudo Genes (multiple problems)  :: 19 of 104
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7610016
                     /organism="Paenibacillus sp. QJM3NY_38"
                     /mol_type="genomic DNA"
                     /strain="QJM3NY_38"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569832"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBUJ010000001-JBWBUJ010000004
WGS_SCAFLD  NZ_CM149665
WGS_SCAFLD  NZ_JBWBUJ010000002-NZ_JBWBUJ010000004
//
LOCUS       NZ_JAABOW010000000   4634340 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pantoea ananatis strain MMB-1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAABOW000000000
VERSION     NZ_JAABOW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13881226
            Assembly: GCF_009996785.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pantoea ananatis
  ORGANISM  Pantoea ananatis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Erwiniaceae; Pantoea.
REFERENCE   1  (bases 1 to 4634340)
  AUTHORS   Lagier,M.J., Dowd,S.E., Castillo,A. and Ragner,A.
  TITLE     Pantoea ananatis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4634340)
  AUTHORS   Lagier,M.J., Dowd,S.E., Castillo,A. and Ragner,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JAN-2020) Biology, Grand View University, 1200 Grand
            View Avenue, Des Moines, IA 50316, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAABOW000000000.1.
            The Pantoea ananatis whole genome shotgun (WGS) project has the
            project accession NZ_JAABOW000000000.  This version of the project
            (01) has the accession number NZ_JAABOW010000000, and consists of
            sequences JAABOW010000001-JAABOW010000012.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 20-NOV-2019
            Assembly Method        :: NGEN assembler v. 16
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009996785.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:59:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,324
            CDSs (total)                      :: 4,215
            Genes (coding)                    :: 4,164
            CDSs (with protein)               :: 4,164
            Genes (RNA)                       :: 109
            rRNAs                             :: 8, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 8 (5S)
            partial rRNAs                     :: 6, 6 (16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 21
            Pseudo Genes (total)              :: 51
            CDSs (without protein)            :: 51
            Pseudo Genes (ambiguous residues) :: 0 of 51
            Pseudo Genes (frameshifted)       :: 21 of 51
            Pseudo Genes (incomplete)         :: 34 of 51
            Pseudo Genes (internal stop)      :: 17 of 51
            Pseudo Genes (multiple problems)  :: 17 of 51
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4634340
                     /organism="Pantoea ananatis"
                     /mol_type="genomic DNA"
                     /strain="MMB-1"
                     /isolation_source="soil"
                     /db_xref="taxon:553"
                     /geo_loc_name="USA"
                     /collection_date="2017"
WGS         JAABOW010000001-JAABOW010000012
WGS_SCAFLD  NZ_JAABOW010000001-NZ_JAABOW010000012
//
LOCUS       NZ_CDVHHF010000000   4163681 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Oceanobacillus kimchii isolate MarMAG_114232, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVHHF000000000
VERSION     NZ_CDVHHF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737357
            Assembly: GCF_977682625.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Oceanobacillus kimchii (marine metagenome)
  ORGANISM  Oceanobacillus kimchii
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Oceanobacillus.
REFERENCE   1  (bases 1 to 4163681)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVHHF000000000.1.
            The Oceanobacillus kimchii whole genome shotgun (WGS) project has
            the project accession NZ_CDVHHF000000000.  This version of the
            project (01) has the accession number NZ_CDVHHF010000000, and
            consists of sequences CDVHHF010000001-CDVHHF010000023.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977682625.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:25:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,226
            CDSs (total)                      :: 4,171
            Genes (coding)                    :: 4,115
            CDSs (with protein)               :: 4,115
            Genes (RNA)                       :: 55
            rRNAs                             :: 2 (5S)
            complete rRNAs                    :: 2 (5S)
            tRNAs                             :: 48
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 56
            CDSs (without protein)            :: 56
            Pseudo Genes (ambiguous residues) :: 0 of 56
            Pseudo Genes (frameshifted)       :: 23 of 56
            Pseudo Genes (incomplete)         :: 38 of 56
            Pseudo Genes (internal stop)      :: 3 of 56
            Pseudo Genes (multiple problems)  :: 8 of 56
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4163681
                     /organism="Oceanobacillus kimchii"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_114232"
                     /isolation_source="Mariana Trench, particle-associated
                     microorganism abyssal water (4,000 m)"
                     /db_xref="taxon:746691"
                     /environmental_sample
                     /geo_loc_name="Pacific Ocean"
                     /collection_date="2016-09-15"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVHHF010000001-CDVHHF010000023
WGS_SCAFLD  NZ_CDVHHF010000001-NZ_CDVHHF010000023
//
LOCUS       NZ_JBWBUI010000000   5247533 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Paraglaciecola sp. QJM3NY_14, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWBUI000000000
VERSION     NZ_JBWBUI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449773
            Assembly: GCF_056173245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Paraglaciecola sp. QJM3NY_14
  ORGANISM  Paraglaciecola sp. QJM3NY_14
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Alteromonadaceae; Paraglaciecola.
REFERENCE   1  (bases 1 to 5247533)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5247533)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBUI000000000.1.
            The Paraglaciecola sp. QJM3NY_14 whole genome shotgun (WGS) project
            has the project accession NZ_JBWBUI000000000.  This version of the
            project (01) has the accession number NZ_JBWBUI010000000, and
            consists of sequences JBWBUI010000001-JBWBUI010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 115.8x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173245.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 18:06:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,479
            CDSs (total)                      :: 4,398
            Genes (coding)                    :: 4,356
            CDSs (with protein)               :: 4,356
            Genes (RNA)                       :: 81
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 15 of 42
            Pseudo Genes (incomplete)         :: 28 of 42
            Pseudo Genes (internal stop)      :: 12 of 42
            Pseudo Genes (multiple problems)  :: 12 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5247533
                     /organism="Paraglaciecola sp. QJM3NY_14"
                     /mol_type="genomic DNA"
                     /strain="QJM3NY_14"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569833"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBUI010000001-JBWBUI010000002
WGS_SCAFLD  NZ_CM149664
WGS_SCAFLD  NZ_JBWBUI010000002
//
LOCUS       NZ_DATJCS010000000   3565536 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Pseudomonas sp. isolate SMAG_U15387, whole genome shotgun
            sequencing project.
ACCESSION   NZ_DATJCS000000000
VERSION     NZ_DATJCS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37936965
            Sequence Read Archive: SRR8931207
            Assembly: GCF_035497915.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq; TPA:assembly.
SOURCE      Pseudomonas sp. (soil metagenome)
  ORGANISM  Pseudomonas sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 3565536)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. doi:
            10.1038/s41467-023-44072-7. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3565536)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            DATJCS000000000.1.
            The Pseudomonas sp. whole genome shotgun (WGS) project has the
            project accession NZ_DATJCS000000000.  This version of the project
            (01) has the accession number NZ_DATJCS010000000, and consists of
            sequences DATJCS010000001-DATJCS010000054.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_035497915.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:44:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,427
            CDSs (total)                      :: 3,374
            Genes (coding)                    :: 3,309
            CDSs (with protein)               :: 3,309
            Genes (RNA)                       :: 53
            rRNAs                             :: 3 (5S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 11 of 65
            Pseudo Genes (incomplete)         :: 56 of 65
            Pseudo Genes (internal stop)      :: 3 of 65
            Pseudo Genes (multiple problems)  :: 5 of 65
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3565536
                     /organism="Pseudomonas sp."
                     /mol_type="genomic DNA"
                     /isolate="SMAG_U15387"
                     /isolation_source="soil"
                     /db_xref="taxon:306"
                     /environmental_sample
                     /geo_loc_name="USA"
                     /lat_lon="43 N 92.5 W"
                     /metagenome_source="soil metagenome"
                     /metagenomic
WGS         DATJCS010000001-DATJCS010000054
WGS_SCAFLD  NZ_DATJCS010000001-NZ_DATJCS010000054
//
LOCUS       NZ_CDUZGU010000000   2831347 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Psychrosphaera haliotis isolate MarMAG_110682, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDUZGU000000000
VERSION     NZ_CDUZGU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120734902
            Assembly: GCF_977628385.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Psychrosphaera haliotis (marine metagenome)
  ORGANISM  Psychrosphaera haliotis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Pseudoalteromonadaceae; Psychrosphaera.
REFERENCE   1  (bases 1 to 2831347)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDUZGU000000000.1.
            The Psychrosphaera haliotis whole genome shotgun (WGS) project has
            the project accession NZ_CDUZGU000000000.  This version of the
            project (01) has the accession number NZ_CDUZGU010000000, and
            consists of sequences CDUZGU010000001-CDUZGU010000113.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977628385.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 01:30:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,664
            CDSs (total)                      :: 2,625
            Genes (coding)                    :: 2,594
            CDSs (with protein)               :: 2,594
            Genes (RNA)                       :: 39
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 34
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 0 of 31
            Pseudo Genes (incomplete)         :: 31 of 31
            Pseudo Genes (internal stop)      :: 0 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2831347
                     /organism="Psychrosphaera haliotis"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_110682"
                     /isolation_source="Helgoland LTER site"
                     /db_xref="taxon:555083"
                     /environmental_sample
                     /geo_loc_name="Germany"
                     /collection_date="2012-06-07"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDUZGU010000001-CDUZGU010000113
WGS_SCAFLD  NZ_CDUZGU010000001-NZ_CDUZGU010000113
//
LOCUS       NZ_JAWLVI010000000   3113092 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudothioclava alba strain FCG-A2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAWLVI000000000
VERSION     NZ_JAWLVI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37733160
            Assembly: GCF_033100795.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudothioclava alba
  ORGANISM  Pseudothioclava alba
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Pseudothioclava.
REFERENCE   1  (bases 1 to 3113092)
  AUTHORS   Zhou,H., Qu,J., Lin,X., Wang,N., Jiang,Z., Lai,Q. and Xu,H.
  TITLE     Two Novel Thiosulfate-Oxidizing Species from Coastal Sediments
            Reveal Distinct Ecological Strategies: Pseudothioclava alba sp.
            nov. and Terasakiella sediminum sp. nov
  JOURNAL   Microorganisms 14 (2), 481 (2026)
   PUBMED   41753767
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3113092)
  AUTHORS   Xu,H. and Qu,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-OCT-2023) school of life sciences, XIAMEN University,
            Xiang'an South Road No. 422, Xiamen, Fujian 361102, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAWLVI000000000.1.
            The Pseudothioclava alba whole genome shotgun (WGS) project has the
            project accession NZ_JAWLVI000000000.  This version of the project
            (01) has the accession number NZ_JAWLVI010000000, and consists of
            sequences JAWLVI010000001-JAWLVI010000023.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_033100795.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:33:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,172
            CDSs (total)                      :: 3,115
            Genes (coding)                    :: 3,073
            CDSs (with protein)               :: 3,073
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 12 of 42
            Pseudo Genes (incomplete)         :: 35 of 42
            Pseudo Genes (internal stop)      :: 2 of 42
            Pseudo Genes (multiple problems)  :: 6 of 42
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3113092
                     /organism="Pseudothioclava alba"
                     /mol_type="genomic DNA"
                     /strain="FCG-A2"
                     /isolation_source="sediment"
                     /type_material="type strain of Pseudothioclava alba"
                     /db_xref="taxon:3080562"
                     /geo_loc_name="China: Guangxi"
                     /collection_date="2023-08"
WGS         JAWLVI010000001-JAWLVI010000023
WGS_SCAFLD  NZ_JAWLVI010000001-NZ_JAWLVI010000023
//
LOCUS       NZ_JAIXJM010000000   7036705 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-18, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXJM000000000
VERSION     NZ_JAIXJM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906734
            Assembly: GCF_045795315.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7036705)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7036705)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXJM000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXJM000000000.  This version of the
            project (01) has the accession number NZ_JAIXJM010000000, and
            consists of sequences JAIXJM010000001-JAIXJM010000269.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 28x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795315.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:24:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,866
            CDSs (total)                      :: 6,801
            Genes (coding)                    :: 6,596
            CDSs (with protein)               :: 6,596
            Genes (RNA)                       :: 65
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 205
            CDSs (without protein)            :: 205
            Pseudo Genes (ambiguous residues) :: 0 of 205
            Pseudo Genes (frameshifted)       :: 43 of 205
            Pseudo Genes (incomplete)         :: 174 of 205
            Pseudo Genes (internal stop)      :: 15 of 205
            Pseudo Genes (multiple problems)  :: 24 of 205
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7036705
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-18"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2014"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXJM010000001-JAIXJM010000269
WGS_SCAFLD  NZ_JAIXJM010000001-NZ_JAIXJM010000269
//
LOCUS       NZ_JBTRIS010000000   6039682 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas alloputida strain NM20, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBTRIS000000000
VERSION     NZ_JBTRIS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53033553
            Assembly: GCF_054604455.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas alloputida
  ORGANISM  Pseudomonas alloputida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6039682)
  AUTHORS   Myers,N., Navaratna,T., Kim,B., Myers,K., Donahue,T., Noguera,D.
            and Bardwell,J.
  TITLE     Genome Sequences of Novel Nicotine-Degrading Pseudomonas Strains
            Isolated from Nicotine-enriched Activated Sludge
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6039682)
  AUTHORS   Myers,N., Navaratna,T., Kim,B., Myers,K., Donahue,T., Noguera,D.
            and Bardwell,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-OCT-2025) MCDB, University of Michigan/HHMI, 1105 N
            University, Ann Arbor, MI 48109, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBTRIS000000000.1.
            The Pseudomonas alloputida whole genome shotgun (WGS) project has
            the project accession NZ_JBTRIS000000000.  This version of the
            project (01) has the accession number NZ_JBTRIS010000000, and
            consists of sequence JBTRIS010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Flye v. 2.9.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 98.1x
            Sequencing Technology  :: Oxford Nanopore
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_054604455.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 08:01:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,573
            CDSs (total)                      :: 5,467
            Genes (coding)                    :: 5,344
            CDSs (with protein)               :: 5,344
            Genes (RNA)                       :: 106
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 80
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 30 of 123
            Pseudo Genes (incomplete)         :: 104 of 123
            Pseudo Genes (internal stop)      :: 17 of 123
            Pseudo Genes (multiple problems)  :: 24 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6039682
                     /organism="Pseudomonas alloputida"
                     /mol_type="genomic DNA"
                     /strain="NM20"
                     /isolation_source="biological waste material
                     [ENVO:01000373]"
                     /db_xref="taxon:2093743"
                     /geo_loc_name="USA: Madison, WI"
                     /lat_lon="43.035028 N 89.357028 W"
                     /collection_date="2024-08-08"
WGS         JBTRIS010000001
WGS_SCAFLD  NZ_CM137733
//
LOCUS       NZ_JBDJLX010000000   5897305 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas alloputida strain TWI749, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBDJLX000000000
VERSION     NZ_JBDJLX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN40712772
            Assembly: GCF_039673565.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas alloputida
  ORGANISM  Pseudomonas alloputida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 5897305)
  AUTHORS   Wyrsch,E.R. and Drigo,B.
  TITLE     WGS of bacteria from Torrens River
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5897305)
  AUTHORS   Wyrsch,E.R. and Drigo,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-APR-2024) Australian Institute for Microbiology and
            Infection, University of Technology Sydney, 15 Broadway, Sydney,
            NSW 2007, Australia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBDJLX000000000.1.
            The Pseudomonas alloputida whole genome shotgun (WGS) project has
            the project accession NZ_JBDJLX000000000.  This version of the
            project (01) has the accession number NZ_JBDJLX010000000, and
            consists of sequences JBDJLX010000001-JBDJLX010000130.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 40x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_039673565.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:06:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,399
            CDSs (total)                      :: 5,318
            Genes (coding)                    :: 5,218
            CDSs (with protein)               :: 5,218
            Genes (RNA)                       :: 81
            rRNAs                             :: 4, 4, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 3 (5S, 16S)
            tRNAs                             :: 68
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 18 of 100
            Pseudo Genes (incomplete)         :: 89 of 100
            Pseudo Genes (internal stop)      :: 11 of 100
            Pseudo Genes (multiple problems)  :: 17 of 100
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5897305
                     /organism="Pseudomonas alloputida"
                     /mol_type="genomic DNA"
                     /strain="TWI749"
                     /isolation_source="river water"
                     /db_xref="taxon:2093743"
                     /geo_loc_name="Australia: Torrens River"
                     /collection_date="2021"
WGS         JBDJLX010000001-JBDJLX010000130
WGS_SCAFLD  NZ_JBDJLX010000001-NZ_JBDJLX010000130
//
LOCUS       NZ_JBHNZZ010000000   6286836 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain DGLJ29, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBHNZZ000000000
VERSION     NZ_JBHNZZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43881913
            Assembly: GCF_045797945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6286836)
  AUTHORS   Rathod,M. and Gajjar,D.
  TITLE     Whole Genome Sequencing of pathogenic Pseudomonas aeruginosa from
            Western part of India
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6286836)
  AUTHORS   Rathod,M. and Gajjar,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-SEP-2024) Department of Microbiology and
            Biotechnology Centre, The Maharaja Sayajirao University of Baroda,
            Pratapgunj, Vadodara 390002, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBHNZZ000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JBHNZZ000000000.  This version of the
            project (01) has the accession number NZ_JBHNZZ010000000, and
            consists of sequences JBHNZZ010000001-JBHNZZ010000081.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2022
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797945.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:39:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,903
            CDSs (total)                      :: 5,839
            Genes (coding)                    :: 5,747
            CDSs (with protein)               :: 5,747
            Genes (RNA)                       :: 64
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 17 of 92
            Pseudo Genes (incomplete)         :: 80 of 92
            Pseudo Genes (internal stop)      :: 2 of 92
            Pseudo Genes (multiple problems)  :: 7 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6286836
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="DGLJ29"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="India: Rajasthan"
                     /collection_date="2022"
                     /collected_by="Milan Rathod"
WGS         JBHNZZ010000001-JBHNZZ010000081
WGS_SCAFLD  NZ_JBHNZZ010000001-NZ_JBHNZZ010000081
//
LOCUS       NZ_JACOPU010000000   6141212 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas sp. P42, whole genome shotgun sequencing project.
ACCESSION   NZ_JACOPU000000000
VERSION     NZ_JACOPU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN15835363
            Assembly: GCF_017973755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas sp. P42
  ORGANISM  Pseudomonas sp. P42
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6141212)
  AUTHORS   Duman,M., Mulet,M., Altun,S., Burcin Saticioglu,I., Gomila,M.,
            Lalucat,J. and Garcia-Valdes,E.
  TITLE     Pseudomonas anatoliensis sp. nov and Pseudomonas iridis sp. nov.
            isolated from fish
  JOURNAL   Syst Appl Microbiol 44 (3), 126198 (2021)
   PUBMED   33838437
  REMARK    Erratum:[Syst Appl Microbiol. 2022 Jan;45(1):126246. doi:
            10.1016/j.syapm.2021.126246. PMID: 34758913]
REFERENCE   2  (bases 1 to 6141212)
  AUTHORS   Duman,M., Saticioglu,I.B. and Altun,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-AUG-2020) Faculty of Veterinary Medicine, Aquatic
            Animal Diseases Department, Erciyes University, Yeni Dogan
            Mahallesi Hulusi Behcet Caddesi No. 55, Kayseri 38039, Turkey
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JACOPU000000000.1.
            The Pseudomonas sp. P42 whole genome shotgun (WGS) project has the
            project accession NZ_JACOPU000000000.  This version of the project
            (01) has the accession number NZ_JACOPU010000000, and consists of
            sequences JACOPU010000001-JACOPU010000018.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Bursa Uludag University,
            Faculty of Veterinary Medicine, Department of Aquatic Animal
            Disease, 16059, Bursa, Turkey.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 20-JUL-2020
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 477.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_017973755.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:47:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,587
            CDSs (total)                      :: 5,517
            Genes (coding)                    :: 5,410
            CDSs (with protein)               :: 5,410
            Genes (RNA)                       :: 70
            rRNAs                             :: 5, 1 (5S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 59
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 107
            CDSs (without protein)            :: 107
            Pseudo Genes (ambiguous residues) :: 0 of 107
            Pseudo Genes (frameshifted)       :: 36 of 107
            Pseudo Genes (incomplete)         :: 88 of 107
            Pseudo Genes (internal stop)      :: 20 of 107
            Pseudo Genes (multiple problems)  :: 30 of 107
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6141212
                     /organism="Pseudomonas sp. P42"
                     /mol_type="genomic DNA"
                     /strain="P42"
                     /isolation_source="Fish Farm"
                     /host="Oncorhynchus mykiss"
                     /db_xref="taxon:1080160"
                     /geo_loc_name="Turkey: Kayseri"
                     /collection_date="2014"
WGS         JACOPU010000001-JACOPU010000018
WGS_SCAFLD  NZ_JACOPU010000001-NZ_JACOPU010000018
//
LOCUS       NZ_JAJSQD020000000   6560350 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas alloputida strain NMI2291_10, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAJSQD000000000
VERSION     NZ_JAJSQD000000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN23773720
            Assembly: GCF_021282725.2
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas alloputida
  ORGANISM  Pseudomonas alloputida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6560350)
  AUTHORS   Urbanowicz,P., Izdebski,R., Biedrzycka,M. and Gniadkowski,M.
  TITLE     MBL-encoding genomic islands in Pseudomonas spp. in Poland
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6560350)
  AUTHORS   Urbanowicz,P. and Izdebski,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JUN-2023) Molecular Microbiology, National Medicines
            Institute, Chelmska 30/34, Warsaw 00-725, Poland
REFERENCE   3  (bases 1 to 6560350)
  AUTHORS   Urbanowicz,P., Izdebski,R. and Gniadkowski,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-DEC-2021) Molecular Microbiology, National Medicines
            Institute, Chelmska 30/34, Warsaw 00-725, Poland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAJSQD000000000.2.
            
            On Jun 28, 2023 this sequence version replaced
            NZ_JAJSQD000000000.1.
            The Pseudomonas alloputida whole genome shotgun (WGS) project has
            the project accession NZ_JAJSQD000000000.  This version of the
            project (02) has the accession number NZ_JAJSQD020000000, and
            consists of sequences JAJSQD020000001-JAJSQD020000010.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 17-DEC-2019
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Illumina HiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_021282725.2-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:04:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,118
            CDSs (total)                      :: 6,019
            Genes (coding)                    :: 5,870
            CDSs (with protein)               :: 5,870
            Genes (RNA)                       :: 99
            rRNAs                             :: 7, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 149
            CDSs (without protein)            :: 149
            Pseudo Genes (ambiguous residues) :: 0 of 149
            Pseudo Genes (frameshifted)       :: 42 of 149
            Pseudo Genes (incomplete)         :: 109 of 149
            Pseudo Genes (internal stop)      :: 17 of 149
            Pseudo Genes (multiple problems)  :: 17 of 149
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6560350
                     /organism="Pseudomonas alloputida"
                     /mol_type="genomic DNA"
                     /strain="NMI2291_10"
                     /isolation_source="BAL"
                     /host="Homo sapiens"
                     /db_xref="taxon:2093743"
                     /geo_loc_name="Poland: Starogard Gdanski"
                     /collection_date="2010-05-20"
                     /collected_by="National Medicines Institute"
                     /genotype="ST69"
WGS         JAJSQD020000001-JAJSQD020000010
WGS_SCAFLD  NZ_JAJSQD020000001-NZ_JAJSQD020000010
//
LOCUS       NZ_JBHNZX010000000   6845146 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain DGLJ25, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBHNZX000000000
VERSION     NZ_JBHNZX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43881911
            Assembly: GCF_045798085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6845146)
  AUTHORS   Rathod,M. and Gajjar,D.
  TITLE     Whole Genome Sequencing of pathogenic Pseudomonas aeruginosa from
            Western part of India
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6845146)
  AUTHORS   Rathod,M. and Gajjar,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-SEP-2024) Department of Microbiology and
            Biotechnology Centre, The Maharaja Sayajirao University of Baroda,
            Pratapgunj, Vadodara 390002, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBHNZX000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JBHNZX000000000.  This version of the
            project (01) has the accession number NZ_JBHNZX010000000, and
            consists of sequences JBHNZX010000001-JBHNZX010000125.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2022
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045798085.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:39:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,481
            CDSs (total)                      :: 6,417
            Genes (coding)                    :: 6,291
            CDSs (with protein)               :: 6,291
            Genes (RNA)                       :: 64
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 126
            CDSs (without protein)            :: 126
            Pseudo Genes (ambiguous residues) :: 0 of 126
            Pseudo Genes (frameshifted)       :: 25 of 126
            Pseudo Genes (incomplete)         :: 105 of 126
            Pseudo Genes (internal stop)      :: 6 of 126
            Pseudo Genes (multiple problems)  :: 8 of 126
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6845146
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="DGLJ25"
                     /isolation_source="pus swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="India: Rajasthan"
                     /collection_date="2022"
                     /collected_by="Milan Rathod"
WGS         JBHNZX010000001-JBHNZX010000125
WGS_SCAFLD  NZ_JBHNZX010000001-NZ_JBHNZX010000125
//
LOCUS       NZ_CDVLLT010000000   4197948 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Pseudooceanicola atlanticus isolate MarMAG_005382, whole
            genome shotgun sequencing project.
ACCESSION   NZ_CDVLLT000000000
VERSION     NZ_CDVLLT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737284
            Assembly: GCF_977710845.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Pseudooceanicola atlanticus (marine metagenome)
  ORGANISM  Pseudooceanicola atlanticus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Pseudooceanicola.
REFERENCE   1  (bases 1 to 4197948)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVLLT000000000.1.
            The Pseudooceanicola atlanticus whole genome shotgun (WGS) project
            has the project accession NZ_CDVLLT000000000.  This version of the
            project (01) has the accession number NZ_CDVLLT010000000, and
            consists of sequences CDVLLT010000001-CDVLLT010000168.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977710845.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:37:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,136
            CDSs (total)                      :: 4,102
            Genes (coding)                    :: 4,024
            CDSs (with protein)               :: 4,024
            Genes (RNA)                       :: 34
            tRNAs                             :: 30
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 78
            CDSs (without protein)            :: 78
            Pseudo Genes (ambiguous residues) :: 0 of 78
            Pseudo Genes (frameshifted)       :: 9 of 78
            Pseudo Genes (incomplete)         :: 63 of 78
            Pseudo Genes (internal stop)      :: 9 of 78
            Pseudo Genes (multiple problems)  :: 3 of 78
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4197948
                     /organism="Pseudooceanicola atlanticus"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_005382"
                     /isolation_source="Mariana Trench, free-living
                     microorganism abyssal water (4,000 m)"
                     /db_xref="taxon:1461694"
                     /environmental_sample
                     /geo_loc_name="Pacific Ocean"
                     /collection_date="2016-09-15"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVLLT010000001-CDVLLT010000168
WGS_SCAFLD  NZ_CDVLLT010000001-NZ_CDVLLT010000168
//
LOCUS       NZ_JBHNZR010000000   6601598 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain DGLJ11, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBHNZR000000000
VERSION     NZ_JBHNZR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43881905
            Assembly: GCF_045798205.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6601598)
  AUTHORS   Rathod,M. and Gajjar,D.
  TITLE     Whole Genome Sequencing of pathogenic Pseudomonas aeruginosa from
            Western part of India
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6601598)
  AUTHORS   Rathod,M. and Gajjar,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-SEP-2024) Department of Microbiology and
            Biotechnology Centre, The Maharaja Sayajirao University of Baroda,
            Pratapgunj, Vadodara 390002, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBHNZR000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JBHNZR000000000.  This version of the
            project (01) has the accession number NZ_JBHNZR010000000, and
            consists of sequences JBHNZR010000001-JBHNZR010000088.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2022
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045798205.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:39:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,240
            CDSs (total)                      :: 6,173
            Genes (coding)                    :: 6,044
            CDSs (with protein)               :: 6,044
            Genes (RNA)                       :: 67
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 58
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 129
            CDSs (without protein)            :: 129
            Pseudo Genes (ambiguous residues) :: 0 of 129
            Pseudo Genes (frameshifted)       :: 40 of 129
            Pseudo Genes (incomplete)         :: 95 of 129
            Pseudo Genes (internal stop)      :: 14 of 129
            Pseudo Genes (multiple problems)  :: 18 of 129
            CRISPR Arrays                     :: 5
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6601598
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="DGLJ11"
                     /isolation_source="ear swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="India: Rajasthan"
                     /collection_date="2022"
                     /collected_by="Milan Rathod"
WGS         JBHNZR010000001-JBHNZR010000088
WGS_SCAFLD  NZ_JBHNZR010000001-NZ_JBHNZR010000088
//
LOCUS       NZ_JAAQXF010000000   5983759 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas rhodesiae strain WS 4669, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAAQXF000000000
VERSION     NZ_JAAQXF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14381964
            Assembly: GCF_012985905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas rhodesiae
  ORGANISM  Pseudomonas rhodesiae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 5983759)
  AUTHORS   Maier,C., Huptas,C., von Neubeck,M., Scherer,S., Wenning,M. and
            Lucking,G.
  TITLE     Genetic Organization of the aprX-lipA2 Operon Affects the
            Proteolytic Potential of Pseudomonas Species in Milk
  JOURNAL   Front Microbiol 11, 1190 (2020)
   PUBMED   32587583
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5983759)
  AUTHORS   Maier,C., Huptas,C., von Neubeck,M., Scherer,S., Wenning,M. and
            Lucking,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-MAR-2020) Chair of Microbial Ecology, ZIEL Institute
            for Food and Health, Technische Universitaet Muenchen,
            Weihenstephaner Berg 3, Freising, Bayern 85354, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAAQXF000000000.1.
            The Pseudomonas rhodesiae whole genome shotgun (WGS) project has
            the project accession NZ_JAAQXF000000000.  This version of the
            project (01) has the accession number NZ_JAAQXF010000000, and
            consists of sequences JAAQXF010000001-JAAQXF010000065.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 2.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 117x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_012985905.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:47:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,592
            CDSs (total)                      :: 5,523
            Genes (coding)                    :: 5,398
            CDSs (with protein)               :: 5,398
            Genes (RNA)                       :: 69
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 125
            CDSs (without protein)            :: 125
            Pseudo Genes (ambiguous residues) :: 0 of 125
            Pseudo Genes (frameshifted)       :: 27 of 125
            Pseudo Genes (incomplete)         :: 104 of 125
            Pseudo Genes (internal stop)      :: 13 of 125
            Pseudo Genes (multiple problems)  :: 16 of 125
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5983759
                     /organism="Pseudomonas rhodesiae"
                     /mol_type="genomic DNA"
                     /strain="WS 4669"
                     /isolation_source="cow"
                     /db_xref="taxon:76760"
                     /geo_loc_name="Germany"
WGS         JAAQXF010000001-JAAQXF010000065
WGS_SCAFLD  NZ_JAAQXF010000001-NZ_JAAQXF010000065
//
LOCUS       NZ_JBHNZQ010000000   6375959 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain DGLJ3, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBHNZQ000000000
VERSION     NZ_JBHNZQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43881904
            Assembly: GCF_045798235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6375959)
  AUTHORS   Rathod,M. and Gajjar,D.
  TITLE     Whole Genome Sequencing of pathogenic Pseudomonas aeruginosa from
            Western part of India
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6375959)
  AUTHORS   Rathod,M. and Gajjar,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-SEP-2024) Department of Microbiology and
            Biotechnology Centre, The Maharaja Sayajirao University of Baroda,
            Pratapgunj, Vadodara 390002, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBHNZQ000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JBHNZQ000000000.  This version of the
            project (01) has the accession number NZ_JBHNZQ010000000, and
            consists of sequences JBHNZQ010000001-JBHNZQ010000142.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2022
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045798235.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:18:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,028
            CDSs (total)                      :: 5,963
            Genes (coding)                    :: 5,864
            CDSs (with protein)               :: 5,864
            Genes (RNA)                       :: 65
            rRNAs                             :: 2, 1, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 99
            CDSs (without protein)            :: 99
            Pseudo Genes (ambiguous residues) :: 0 of 99
            Pseudo Genes (frameshifted)       :: 17 of 99
            Pseudo Genes (incomplete)         :: 85 of 99
            Pseudo Genes (internal stop)      :: 4 of 99
            Pseudo Genes (multiple problems)  :: 7 of 99
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6375959
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="DGLJ3"
                     /isolation_source="ear swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="India: Rajasthan"
                     /collection_date="2022"
                     /collected_by="Milan Rathod"
WGS         JBHNZQ010000001-JBHNZQ010000142
WGS_SCAFLD  NZ_JBHNZQ010000001-NZ_JBHNZQ010000142
//
LOCUS       NZ_JAIXIX010000000   6990326 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-33, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXIX000000000
VERSION     NZ_JAIXIX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906749
            Assembly: GCF_045795065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6990326)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6990326)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXIX000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXIX000000000.  This version of the
            project (01) has the accession number NZ_JAIXIX010000000, and
            consists of sequences JAIXIX010000001-JAIXIX010000106.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 113x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795065.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:08:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,652
            CDSs (total)                      :: 6,592
            Genes (coding)                    :: 6,502
            CDSs (with protein)               :: 6,502
            Genes (RNA)                       :: 60
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 90
            CDSs (without protein)            :: 90
            Pseudo Genes (ambiguous residues) :: 0 of 90
            Pseudo Genes (frameshifted)       :: 13 of 90
            Pseudo Genes (incomplete)         :: 79 of 90
            Pseudo Genes (internal stop)      :: 3 of 90
            Pseudo Genes (multiple problems)  :: 4 of 90
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6990326
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-33"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2016"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXIX010000001-JAIXIX010000106
WGS_SCAFLD  NZ_JAIXIX010000001-NZ_JAIXIX010000106
//
LOCUS       NZ_JAIXJF010000000   7233278 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-25, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXJF000000000
VERSION     NZ_JAIXJF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906741
            Assembly: GCF_045795205.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7233278)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7233278)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXJF000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXJF000000000.  This version of the
            project (01) has the accession number NZ_JAIXJF010000000, and
            consists of sequences JAIXJF010000001-JAIXJF010000184.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 165x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795205.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:02:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,974
            CDSs (total)                      :: 6,908
            Genes (coding)                    :: 6,788
            CDSs (with protein)               :: 6,788
            Genes (RNA)                       :: 66
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 120
            CDSs (without protein)            :: 120
            Pseudo Genes (ambiguous residues) :: 0 of 120
            Pseudo Genes (frameshifted)       :: 25 of 120
            Pseudo Genes (incomplete)         :: 98 of 120
            Pseudo Genes (internal stop)      :: 6 of 120
            Pseudo Genes (multiple problems)  :: 8 of 120
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7233278
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-25"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2015"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXJF010000001-JAIXJF010000184
WGS_SCAFLD  NZ_JAIXJF010000001-NZ_JAIXJF010000184
//
LOCUS       NZ_VTOX01000000      5263905 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Ramlibacter lithotrophicus strain RBP-1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VTOX00000000
VERSION     NZ_VTOX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12638106
            Assembly: GCF_012184415.1
KEYWORDS    WGS; RefSeq.
SOURCE      Ramlibacter lithotrophicus
  ORGANISM  Ramlibacter lithotrophicus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Ramlibacter.
REFERENCE   1  (bases 1 to 5263905)
  AUTHORS   Yu,H. and Leadbetter,J.R.
  TITLE     Bacterial chemolithoautotrophy via manganese oxidation
  JOURNAL   Nature 583 (7816), 453-458 (2020)
   PUBMED   32669693
REFERENCE   2  (bases 1 to 5263905)
  AUTHORS   Yu,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-AUG-2019) Geological and Planetary Sciences,
            California Institute of Technology, 1200 E California Blvd
            MC100-23, Pasadena, CA 91125, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VTOX00000000.1.
            The Ramlibacter lithotrophicus whole genome shotgun (WGS) project
            has the project accession NZ_VTOX00000000.  This version of the
            project (01) has the accession number NZ_VTOX01000000, and consists
            of sequences VTOX01000001-VTOX01000024.
            
            Strain designation was changed from RBP-2 to RBP-1 (AUG-2020).
            
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: FEB-2018
            Assembly Method        :: Spades v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 234x
            Sequencing Technology  :: Illumina HiSeq 2500 PE250
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_012184415.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:52:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,119
            CDSs (total)                      :: 5,065
            Genes (coding)                    :: 5,016
            CDSs (with protein)               :: 5,016
            Genes (RNA)                       :: 54
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 11 of 49
            Pseudo Genes (incomplete)         :: 41 of 49
            Pseudo Genes (internal stop)      :: 4 of 49
            Pseudo Genes (multiple problems)  :: 7 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5263905
                     /organism="Ramlibacter lithotrophicus"
                     /mol_type="genomic DNA"
                     /strain="RBP-1"
                     /isolation_source="In vitro refined co-culture"
                     /type_material="reference strain of Ramlibacter
                     lithotrophicus"
                     /db_xref="taxon:2606681"
                     /geo_loc_name="USA: North Mudd Laboratories, California
                     Institute of Technology (Caltech)"
                     /lat_lon="34.1367 N 118.1273 W"
                     /collection_date="2018-02"
                     /collected_by="Hang Yu, Jared R. Leadbetter"
WGS         VTOX01000001-VTOX01000024
WGS_SCAFLD  NZ_VTOX01000001-NZ_VTOX01000024
//
LOCUS       NZ_JAIXJX010000000   6883458 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-07, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXJX000000000
VERSION     NZ_JAIXJX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906723
            Assembly: GCF_045795585.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6883458)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6883458)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXJX000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXJX000000000.  This version of the
            project (01) has the accession number NZ_JAIXJX010000000, and
            consists of sequences JAIXJX010000001-JAIXJX010000168.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 55x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795585.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:03:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,630
            CDSs (total)                      :: 6,562
            Genes (coding)                    :: 6,437
            CDSs (with protein)               :: 6,437
            Genes (RNA)                       :: 68
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 125
            CDSs (without protein)            :: 125
            Pseudo Genes (ambiguous residues) :: 0 of 125
            Pseudo Genes (frameshifted)       :: 21 of 125
            Pseudo Genes (incomplete)         :: 108 of 125
            Pseudo Genes (internal stop)      :: 4 of 125
            Pseudo Genes (multiple problems)  :: 7 of 125
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6883458
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-07"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2010"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXJX010000001-JAIXJX010000168
WGS_SCAFLD  NZ_JAIXJX010000001-NZ_JAIXJX010000168
//
LOCUS       NZ_JAIXIP010000000   7038765 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-41, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXIP000000000
VERSION     NZ_JAIXIP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906757
            Assembly: GCF_045794895.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7038765)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7038765)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXIP000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXIP000000000.  This version of the
            project (01) has the accession number NZ_JAIXIP010000000, and
            consists of sequences JAIXIP010000001-JAIXIP010000236.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 55x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045794895.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:16:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,787
            CDSs (total)                      :: 6,721
            Genes (coding)                    :: 6,575
            CDSs (with protein)               :: 6,575
            Genes (RNA)                       :: 66
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 146
            CDSs (without protein)            :: 146
            Pseudo Genes (ambiguous residues) :: 0 of 146
            Pseudo Genes (frameshifted)       :: 20 of 146
            Pseudo Genes (incomplete)         :: 129 of 146
            Pseudo Genes (internal stop)      :: 4 of 146
            Pseudo Genes (multiple problems)  :: 6 of 146
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7038765
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-41"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2019"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXIP010000001-JAIXIP010000236
WGS_SCAFLD  NZ_JAIXIP010000001-NZ_JAIXIP010000236
//
LOCUS       NZ_JBHOAD010000000   6858836 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain DGLTL12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBHOAD000000000
VERSION     NZ_JBHOAD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43881917
            Assembly: GCF_045797885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6858836)
  AUTHORS   Rathod,M. and Gajjar,D.
  TITLE     Whole Genome Sequencing of pathogenic Pseudomonas aeruginosa from
            Western part of India
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6858836)
  AUTHORS   Rathod,M. and Gajjar,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-SEP-2024) Department of Microbiology and
            Biotechnology Centre, The Maharaja Sayajirao University of Baroda,
            Pratapgunj, Vadodara 390002, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBHOAD000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JBHOAD000000000.  This version of the
            project (01) has the accession number NZ_JBHOAD010000000, and
            consists of sequences JBHOAD010000001-JBHOAD010000104.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2021
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797885.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:27:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,592
            CDSs (total)                      :: 6,525
            Genes (coding)                    :: 6,399
            CDSs (with protein)               :: 6,399
            Genes (RNA)                       :: 67
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 126
            CDSs (without protein)            :: 126
            Pseudo Genes (ambiguous residues) :: 0 of 126
            Pseudo Genes (frameshifted)       :: 27 of 126
            Pseudo Genes (incomplete)         :: 105 of 126
            Pseudo Genes (internal stop)      :: 5 of 126
            Pseudo Genes (multiple problems)  :: 9 of 126
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6858836
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="DGLTL12"
                     /isolation_source="urinary tract infection"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="India: Gujarat"
                     /collection_date="2021"
                     /collected_by="Milan Rathod"
WGS         JBHOAD010000001-JBHOAD010000104
WGS_SCAFLD  NZ_JBHOAD010000001-NZ_JBHOAD010000104
//
LOCUS       NZ_CDVCTS010000000   3162541 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Qipengyuania citrea isolate MarMAG_113965, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVCTS000000000
VERSION     NZ_CDVCTS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737200
            Assembly: GCF_977652055.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Qipengyuania citrea (marine sediment metagenome)
  ORGANISM  Qipengyuania citrea
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Qipengyuania.
REFERENCE   1  (bases 1 to 3162541)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVCTS000000000.1.
            The Qipengyuania citrea whole genome shotgun (WGS) project has the
            project accession NZ_CDVCTS000000000.  This version of the project
            (01) has the accession number NZ_CDVCTS010000000, and consists of
            sequences CDVCTS010000001-CDVCTS010000021.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977652055.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:27:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,129
            CDSs (total)                      :: 3,076
            Genes (coding)                    :: 3,051
            CDSs (with protein)               :: 3,051
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 25
            CDSs (without protein)            :: 25
            Pseudo Genes (ambiguous residues) :: 0 of 25
            Pseudo Genes (frameshifted)       :: 3 of 25
            Pseudo Genes (incomplete)         :: 21 of 25
            Pseudo Genes (internal stop)      :: 2 of 25
            Pseudo Genes (multiple problems)  :: 1 of 25
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3162541
                     /organism="Qipengyuania citrea"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_113965"
                     /db_xref="taxon:225971"
                     /environmental_sample
                     /geo_loc_name="Atlantic Ocean"
                     /metagenome_source="marine sediment metagenome"
                     /metagenomic
WGS         CDVCTS010000001-CDVCTS010000021
WGS_SCAFLD  NZ_CDVCTS010000001-NZ_CDVCTS010000021
//
LOCUS       NZ_JAIXJT010000000   7107282 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-11, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXJT000000000
VERSION     NZ_JAIXJT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906727
            Assembly: GCF_045795505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7107282)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7107282)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXJT000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXJT000000000.  This version of the
            project (01) has the accession number NZ_JAIXJT010000000, and
            consists of sequences JAIXJT010000001-JAIXJT010000187.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 51x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795505.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:18:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,859
            CDSs (total)                      :: 6,795
            Genes (coding)                    :: 6,650
            CDSs (with protein)               :: 6,650
            Genes (RNA)                       :: 64
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 35 of 145
            Pseudo Genes (incomplete)         :: 112 of 145
            Pseudo Genes (internal stop)      :: 7 of 145
            Pseudo Genes (multiple problems)  :: 9 of 145
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7107282
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-11"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2011"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXJT010000001-JAIXJT010000187
WGS_SCAFLD  NZ_JAIXJT010000001-NZ_JAIXJT010000187
//
LOCUS       NZ_JAIXKB010000000   6831851 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-03, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXKB000000000
VERSION     NZ_JAIXKB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906719
            Assembly: GCF_045795665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6831851)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6831851)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXKB000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXKB000000000.  This version of the
            project (01) has the accession number NZ_JAIXKB010000000, and
            consists of sequences JAIXKB010000001-JAIXKB010000210.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 83x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795665.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:11:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,523
            CDSs (total)                      :: 6,458
            Genes (coding)                    :: 6,315
            CDSs (with protein)               :: 6,315
            Genes (RNA)                       :: 65
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 143
            CDSs (without protein)            :: 143
            Pseudo Genes (ambiguous residues) :: 0 of 143
            Pseudo Genes (frameshifted)       :: 29 of 143
            Pseudo Genes (incomplete)         :: 113 of 143
            Pseudo Genes (internal stop)      :: 6 of 143
            Pseudo Genes (multiple problems)  :: 5 of 143
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6831851
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-03"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2007"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXKB010000001-JAIXKB010000210
WGS_SCAFLD  NZ_JAIXKB010000001-NZ_JAIXKB010000210
//
LOCUS       NZ_JBHNZV010000000   6291823 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain DGLJ23, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBHNZV000000000
VERSION     NZ_JBHNZV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43881909
            Assembly: GCF_045798165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6291823)
  AUTHORS   Rathod,M. and Gajjar,D.
  TITLE     Whole Genome Sequencing of pathogenic Pseudomonas aeruginosa from
            Western part of India
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6291823)
  AUTHORS   Rathod,M. and Gajjar,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-SEP-2024) Department of Microbiology and
            Biotechnology Centre, The Maharaja Sayajirao University of Baroda,
            Pratapgunj, Vadodara 390002, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBHNZV000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JBHNZV000000000.  This version of the
            project (01) has the accession number NZ_JBHNZV010000000, and
            consists of sequences JBHNZV010000001-JBHNZV010000092.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2022
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045798165.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:27:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,918
            CDSs (total)                      :: 5,852
            Genes (coding)                    :: 5,759
            CDSs (with protein)               :: 5,759
            Genes (RNA)                       :: 66
            rRNAs                             :: 1, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 93
            CDSs (without protein)            :: 93
            Pseudo Genes (ambiguous residues) :: 0 of 93
            Pseudo Genes (frameshifted)       :: 16 of 93
            Pseudo Genes (incomplete)         :: 81 of 93
            Pseudo Genes (internal stop)      :: 3 of 93
            Pseudo Genes (multiple problems)  :: 7 of 93
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6291823
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="DGLJ23"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="India: Rajasthan"
                     /collection_date="2022"
                     /collected_by="Milan Rathod"
WGS         JBHNZV010000001-JBHNZV010000092
WGS_SCAFLD  NZ_JBHNZV010000001-NZ_JBHNZV010000092
//
LOCUS       NZ_JAIXJI010000000   6767623 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-22, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXJI000000000
VERSION     NZ_JAIXJI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906738
            Assembly: GCF_045795285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6767623)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6767623)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXJI000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXJI000000000.  This version of the
            project (01) has the accession number NZ_JAIXJI010000000, and
            consists of sequences JAIXJI010000001-JAIXJI010000134.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 165x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795285.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:14:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,378
            CDSs (total)                      :: 6,311
            Genes (coding)                    :: 6,211
            CDSs (with protein)               :: 6,211
            Genes (RNA)                       :: 67
            rRNAs                             :: 1, 2, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 5 (16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 25 of 100
            Pseudo Genes (incomplete)         :: 76 of 100
            Pseudo Genes (internal stop)      :: 5 of 100
            Pseudo Genes (multiple problems)  :: 5 of 100
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6767623
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-22"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2014"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXJI010000001-JAIXJI010000134
WGS_SCAFLD  NZ_JAIXJI010000001-NZ_JAIXJI010000134
//
LOCUS       NZ_JAJSQB010000000   6402142 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas alloputida strain NMI9276_10, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAJSQB000000000
VERSION     NZ_JAJSQB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN23773718
            Assembly: GCF_021282505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas alloputida
  ORGANISM  Pseudomonas alloputida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6402142)
  AUTHORS   Urbanowicz,P., Izdebski,R., Biedrzycka,M., Literacka,E. and
            Gniadkowski,M.
  TITLE     Molecular epidemiology of MBL-producing Pseudomonas putida group in
            Poland, 2003-2016
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6402142)
  AUTHORS   Urbanowicz,P., Izdebski,R. and Gniadkowski,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-DEC-2021) Molecular Microbiology, National Medicines
            Institute, Chelmska 30/34, Warsaw 00-725, Poland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAJSQB000000000.1.
            The Pseudomonas alloputida whole genome shotgun (WGS) project has
            the project accession NZ_JAJSQB000000000.  This version of the
            project (01) has the accession number NZ_JAJSQB010000000, and
            consists of sequences JAJSQB010000001-JAJSQB010000152.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 01-FEB-2019
            Assembly Method        :: SPAdes v. 3.10. 0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 40x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_021282505.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:48:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,011
            CDSs (total)                      :: 5,943
            Genes (coding)                    :: 5,778
            CDSs (with protein)               :: 5,778
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 165
            CDSs (without protein)            :: 165
            Pseudo Genes (ambiguous residues) :: 0 of 165
            Pseudo Genes (frameshifted)       :: 42 of 165
            Pseudo Genes (incomplete)         :: 126 of 165
            Pseudo Genes (internal stop)      :: 17 of 165
            Pseudo Genes (multiple problems)  :: 18 of 165
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6402142
                     /organism="Pseudomonas alloputida"
                     /mol_type="genomic DNA"
                     /strain="NMI9276_10"
                     /isolation_source="stomach content"
                     /host="Homo sapiens"
                     /db_xref="taxon:2093743"
                     /geo_loc_name="Poland: Krakow"
                     /collection_date="2010"
                     /collected_by="National Medicines Institute"
                     /genotype="ST69"
WGS         JAJSQB010000001-JAJSQB010000152
WGS_SCAFLD  NZ_JAJSQB010000001-NZ_JAJSQB010000152
//
LOCUS       NZ_JAIXJN010000000   7054555 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-17, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXJN000000000
VERSION     NZ_JAIXJN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906733
            Assembly: GCF_045795385.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7054555)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7054555)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXJN000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXJN000000000.  This version of the
            project (01) has the accession number NZ_JAIXJN010000000, and
            consists of sequences JAIXJN010000001-JAIXJN010000177.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 54x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795385.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:25:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,775
            CDSs (total)                      :: 6,711
            Genes (coding)                    :: 6,562
            CDSs (with protein)               :: 6,562
            Genes (RNA)                       :: 64
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 149
            CDSs (without protein)            :: 149
            Pseudo Genes (ambiguous residues) :: 0 of 149
            Pseudo Genes (frameshifted)       :: 33 of 149
            Pseudo Genes (incomplete)         :: 120 of 149
            Pseudo Genes (internal stop)      :: 7 of 149
            Pseudo Genes (multiple problems)  :: 11 of 149
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7054555
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-17"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2014"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXJN010000001-JAIXJN010000177
WGS_SCAFLD  NZ_JAIXJN010000001-NZ_JAIXJN010000177
//
LOCUS       NZ_JBKXNW010000000   3021878 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Pseudoruminococcus sp. isolate C020_24, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBKXNW000000000
VERSION     NZ_JBKXNW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43247245
            Sequence Read Archive: SRR31672522
            Assembly: GCF_047012705.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Pseudoruminococcus sp. (human gut metagenome)
  ORGANISM  Pseudoruminococcus sp.
            Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales;
            Acutalibacteraceae; Pseudoruminococcus.
REFERENCE   1  (bases 1 to 3021878)
  AUTHORS   Sawhney,S., Thaenert,R., Thaenert,A., Hall-Moore,C., Ndao,M.,
            Mahmud,B., Warner,B., Tarr,P.I. and Dantas,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-DEC-2024) Center for Genome Sciences, Washington
            University in Saint Louis, 4515 McKinley Ave, Saint Louis, MO
            63110, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBKXNW000000000.1.
            The Pseudoruminococcus sp. whole genome shotgun (WGS) project has
            the project accession NZ_JBKXNW000000000.  This version of the
            project (01) has the accession number NZ_JBKXNW010000000, and
            consists of sequences JBKXNW010000001-JBKXNW010000054.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 22.786944025843795x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_047012705.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:38:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,926
            CDSs (total)                      :: 2,870
            Genes (coding)                    :: 2,828
            CDSs (with protein)               :: 2,828
            Genes (RNA)                       :: 56
            rRNAs                             :: 3, 1 (5S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 42
            CDSs (without protein)            :: 42
            Pseudo Genes (ambiguous residues) :: 0 of 42
            Pseudo Genes (frameshifted)       :: 9 of 42
            Pseudo Genes (incomplete)         :: 34 of 42
            Pseudo Genes (internal stop)      :: 2 of 42
            Pseudo Genes (multiple problems)  :: 3 of 42
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3021878
                     /organism="Pseudoruminococcus sp."
                     /mol_type="genomic DNA"
                     /isolate="C020_24"
                     /isolation_source="maternal stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:3101048"
                     /environmental_sample
                     /geo_loc_name="USA: Saint Louis"
                     /lat_lon="38.6270 N 90.1994 W"
                     /collection_date="2010-11-27"
                     /metagenome_source="human gut metagenome"
                     /metagenomic
WGS         JBKXNW010000001-JBKXNW010000054
WGS_SCAFLD  NZ_JBKXNW010000001-NZ_JBKXNW010000054
//
LOCUS       NZ_JAJSRP010000000   6648013 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas alloputida strain NMI4481_15, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAJSRP000000000
VERSION     NZ_JAJSRP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN23773758
            Assembly: GCF_021283515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas alloputida
  ORGANISM  Pseudomonas alloputida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6648013)
  AUTHORS   Urbanowicz,P., Izdebski,R., Biedrzycka,M., Literacka,E. and
            Gniadkowski,M.
  TITLE     Molecular epidemiology of MBL-producing Pseudomonas putida group in
            Poland, 2003-2016
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6648013)
  AUTHORS   Urbanowicz,P., Izdebski,R. and Gniadkowski,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-DEC-2021) Molecular Microbiology, National Medicines
            Institute, Chelmska 30/34, Warsaw 00-725, Poland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAJSRP000000000.1.
            The Pseudomonas alloputida whole genome shotgun (WGS) project has
            the project accession NZ_JAJSRP000000000.  This version of the
            project (01) has the accession number NZ_JAJSRP010000000, and
            consists of sequences JAJSRP010000001-JAJSRP010000157.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 01-FEB-2019
            Assembly Method        :: SPAdes v. 3.10. 0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 40x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_021283515.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:06:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,333
            CDSs (total)                      :: 6,258
            Genes (coding)                    :: 6,085
            CDSs (with protein)               :: 6,085
            Genes (RNA)                       :: 75
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 173
            CDSs (without protein)            :: 173
            Pseudo Genes (ambiguous residues) :: 0 of 173
            Pseudo Genes (frameshifted)       :: 41 of 173
            Pseudo Genes (incomplete)         :: 134 of 173
            Pseudo Genes (internal stop)      :: 17 of 173
            Pseudo Genes (multiple problems)  :: 17 of 173
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6648013
                     /organism="Pseudomonas alloputida"
                     /mol_type="genomic DNA"
                     /strain="NMI4481_15"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:2093743"
                     /geo_loc_name="Poland: Pruszkow"
                     /collection_date="2015-11-16"
                     /collected_by="National Medicines Institute"
                     /genotype="ST69"
WGS         JAJSRP010000001-JAJSRP010000157
WGS_SCAFLD  NZ_JAJSRP010000001-NZ_JAJSRP010000157
//
LOCUS       NZ_JAJSRL010000000   6421375 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas alloputida strain NMI3760_14, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAJSRL000000000
VERSION     NZ_JAJSRL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN23773754
            Assembly: GCF_021283435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas alloputida
  ORGANISM  Pseudomonas alloputida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6421375)
  AUTHORS   Urbanowicz,P., Izdebski,R., Biedrzycka,M., Literacka,E. and
            Gniadkowski,M.
  TITLE     Molecular epidemiology of MBL-producing Pseudomonas putida group in
            Poland, 2003-2016
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6421375)
  AUTHORS   Urbanowicz,P., Izdebski,R. and Gniadkowski,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-DEC-2021) Molecular Microbiology, National Medicines
            Institute, Chelmska 30/34, Warsaw 00-725, Poland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAJSRL000000000.1.
            The Pseudomonas alloputida whole genome shotgun (WGS) project has
            the project accession NZ_JAJSRL000000000.  This version of the
            project (01) has the accession number NZ_JAJSRL010000000, and
            consists of sequences JAJSRL010000001-JAJSRL010000157.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 01-FEB-2019
            Assembly Method        :: SPAdes v. 3.10. 0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 40x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_021283435.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:05:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,032
            CDSs (total)                      :: 5,960
            Genes (coding)                    :: 5,790
            CDSs (with protein)               :: 5,790
            Genes (RNA)                       :: 72
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 170
            CDSs (without protein)            :: 170
            Pseudo Genes (ambiguous residues) :: 0 of 170
            Pseudo Genes (frameshifted)       :: 44 of 170
            Pseudo Genes (incomplete)         :: 128 of 170
            Pseudo Genes (internal stop)      :: 18 of 170
            Pseudo Genes (multiple problems)  :: 18 of 170
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6421375
                     /organism="Pseudomonas alloputida"
                     /mol_type="genomic DNA"
                     /strain="NMI3760_14"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:2093743"
                     /geo_loc_name="Poland: Rzeszow"
                     /collection_date="2014-08-13"
                     /collected_by="National Medicines Institute"
                     /genotype="ST69"
WGS         JAJSRL010000001-JAJSRL010000157
WGS_SCAFLD  NZ_JAJSRL010000001-NZ_JAJSRL010000157
//
LOCUS       NZ_JAIXJY010000000   6650836 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-06, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXJY000000000
VERSION     NZ_JAIXJY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906722
            Assembly: GCF_045795605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6650836)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6650836)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXJY000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXJY000000000.  This version of the
            project (01) has the accession number NZ_JAIXJY010000000, and
            consists of sequences JAIXJY010000001-JAIXJY010000171.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 54x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795605.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:12:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,316
            CDSs (total)                      :: 6,250
            Genes (coding)                    :: 6,136
            CDSs (with protein)               :: 6,136
            Genes (RNA)                       :: 66
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 114
            CDSs (without protein)            :: 114
            Pseudo Genes (ambiguous residues) :: 0 of 114
            Pseudo Genes (frameshifted)       :: 18 of 114
            Pseudo Genes (incomplete)         :: 98 of 114
            Pseudo Genes (internal stop)      :: 5 of 114
            Pseudo Genes (multiple problems)  :: 6 of 114
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6650836
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-06"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2009"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXJY010000001-JAIXJY010000171
WGS_SCAFLD  NZ_JAIXJY010000001-NZ_JAIXJY010000171
//
LOCUS       NZ_JAIXIR010000000   6792295 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-39, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXIR000000000
VERSION     NZ_JAIXIR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906755
            Assembly: GCF_045794925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6792295)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6792295)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXIR000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXIR000000000.  This version of the
            project (01) has the accession number NZ_JAIXIR010000000, and
            consists of sequences JAIXIR010000001-JAIXIR010000130.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 132x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045794925.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:04:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,469
            CDSs (total)                      :: 6,406
            Genes (coding)                    :: 6,316
            CDSs (with protein)               :: 6,316
            Genes (RNA)                       :: 63
            rRNAs                             :: 1, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 90
            CDSs (without protein)            :: 90
            Pseudo Genes (ambiguous residues) :: 0 of 90
            Pseudo Genes (frameshifted)       :: 18 of 90
            Pseudo Genes (incomplete)         :: 74 of 90
            Pseudo Genes (internal stop)      :: 5 of 90
            Pseudo Genes (multiple problems)  :: 6 of 90
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6792295
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-39"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2018"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXIR010000001-JAIXIR010000130
WGS_SCAFLD  NZ_JAIXIR010000001-NZ_JAIXIR010000130
//
LOCUS       NZ_JBHOAA010000000   6758382 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain DGLTL7, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBHOAA000000000
VERSION     NZ_JBHOAA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43881914
            Assembly: GCF_045797985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6758382)
  AUTHORS   Rathod,M. and Gajjar,D.
  TITLE     Whole Genome Sequencing of pathogenic Pseudomonas aeruginosa from
            Western part of India
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6758382)
  AUTHORS   Rathod,M. and Gajjar,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-SEP-2024) Department of Microbiology and
            Biotechnology Centre, The Maharaja Sayajirao University of Baroda,
            Pratapgunj, Vadodara 390002, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBHOAA000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JBHOAA000000000.  This version of the
            project (01) has the accession number NZ_JBHOAA010000000, and
            consists of sequences JBHOAA010000001-JBHOAA010000113.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2021
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797985.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:32:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,430
            CDSs (total)                      :: 6,360
            Genes (coding)                    :: 6,259
            CDSs (with protein)               :: 6,259
            Genes (RNA)                       :: 70
            rRNAs                             :: 3, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 101
            CDSs (without protein)            :: 101
            Pseudo Genes (ambiguous residues) :: 0 of 101
            Pseudo Genes (frameshifted)       :: 20 of 101
            Pseudo Genes (incomplete)         :: 86 of 101
            Pseudo Genes (internal stop)      :: 4 of 101
            Pseudo Genes (multiple problems)  :: 8 of 101
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6758382
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="DGLTL7"
                     /isolation_source="urinary tract infection"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="India: Gujarat"
                     /collection_date="2021"
                     /collected_by="Milan Rathod"
WGS         JBHOAA010000001-JBHOAA010000113
WGS_SCAFLD  NZ_JBHOAA010000001-NZ_JBHOAA010000113
//
LOCUS       NZ_JBGFFI010000000   4293323 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudoxanthomonas sp. LjRoot206, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBGFFI000000000
VERSION     NZ_JBGFFI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN42959552
            Assembly: GCF_056175725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudoxanthomonas sp. LjRoot206
  ORGANISM  Pseudoxanthomonas sp. LjRoot206
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
REFERENCE   1  (bases 1 to 4293323)
  AUTHORS   Selten,G., Lamouche,F., Gomez Repolles,A., Tao,K., Blahovska,Z. and
            Radutoiu,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-AUG-2024) Plant-Microbe Interactions, Utrecht
            University, Padualaan 8, Utrecht, Utrecht 3584 CH, Netherlands
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGFFI000000000.1.
            The Pseudoxanthomonas sp. LjRoot206 whole genome shotgun (WGS)
            project has the project accession NZ_JBGFFI000000000.  This version
            of the project (01) has the accession number NZ_JBGFFI010000000,
            and consists of sequences JBGFFI010000001-JBGFFI010000019.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: A5 v. A5-miseq version 20160825
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 124x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056175725.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:45:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,048
            CDSs (total)                      :: 3,992
            Genes (coding)                    :: 3,943
            CDSs (with protein)               :: 3,943
            Genes (RNA)                       :: 56
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 7 of 49
            Pseudo Genes (incomplete)         :: 43 of 49
            Pseudo Genes (internal stop)      :: 1 of 49
            Pseudo Genes (multiple problems)  :: 2 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4293323
                     /organism="Pseudoxanthomonas sp. LjRoot206"
                     /mol_type="genomic DNA"
                     /strain="LjRoot206"
                     /isolation_source="root"
                     /host="Lotus japonicus Gifu"
                     /db_xref="taxon:3240877"
                     /geo_loc_name="Germany: Cologne"
                     /collection_date="2017"
                     /identified_by="Gijs Selten and Adrian Gomez Repolles"
WGS         JBGFFI010000001-JBGFFI010000019
WGS_SCAFLD  NZ_JBGFFI010000001-NZ_JBGFFI010000019
//
LOCUS       NZ_JAIXJP010000000   7207013 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-15, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXJP000000000
VERSION     NZ_JAIXJP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906731
            Assembly: GCF_045795445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7207013)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7207013)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXJP000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXJP000000000.  This version of the
            project (01) has the accession number NZ_JAIXJP010000000, and
            consists of sequences JAIXJP010000001-JAIXJP010000234.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 62x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795445.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:27:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,065
            CDSs (total)                      :: 6,994
            Genes (coding)                    :: 6,832
            CDSs (with protein)               :: 6,832
            Genes (RNA)                       :: 71
            rRNAs                             :: 3, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 2 (5S, 16S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 162
            CDSs (without protein)            :: 162
            Pseudo Genes (ambiguous residues) :: 0 of 162
            Pseudo Genes (frameshifted)       :: 29 of 162
            Pseudo Genes (incomplete)         :: 138 of 162
            Pseudo Genes (internal stop)      :: 2 of 162
            Pseudo Genes (multiple problems)  :: 6 of 162
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7207013
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-15"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2013"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXJP010000001-JAIXJP010000234
WGS_SCAFLD  NZ_JAIXJP010000001-NZ_JAIXJP010000234
//
LOCUS       NZ_JAIXKC010000000   6920352 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-02, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXKC000000000
VERSION     NZ_JAIXKC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906718
            Assembly: GCF_045795685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6920352)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6920352)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXKC000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXKC000000000.  This version of the
            project (01) has the accession number NZ_JAIXKC010000000, and
            consists of sequences JAIXKC010000001-JAIXKC010000309.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 42x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795685.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:25:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,745
            CDSs (total)                      :: 6,682
            Genes (coding)                    :: 6,508
            CDSs (with protein)               :: 6,508
            Genes (RNA)                       :: 63
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 174
            CDSs (without protein)            :: 174
            Pseudo Genes (ambiguous residues) :: 0 of 174
            Pseudo Genes (frameshifted)       :: 18 of 174
            Pseudo Genes (incomplete)         :: 156 of 174
            Pseudo Genes (internal stop)      :: 8 of 174
            Pseudo Genes (multiple problems)  :: 7 of 174
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6920352
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-02"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2006"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXKC010000001-JAIXKC010000309
WGS_SCAFLD  NZ_JAIXKC010000001-NZ_JAIXKC010000309
//
LOCUS       NZ_JAIXIO010000000   6701567 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-42, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXIO000000000
VERSION     NZ_JAIXIO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906758
            Assembly: GCF_045794885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6701567)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6701567)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXIO000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXIO000000000.  This version of the
            project (01) has the accession number NZ_JAIXIO010000000, and
            consists of sequences JAIXIO010000001-JAIXIO010000128.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 106x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045794885.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:07:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,267
            CDSs (total)                      :: 6,205
            Genes (coding)                    :: 6,105
            CDSs (with protein)               :: 6,105
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 100
            CDSs (without protein)            :: 100
            Pseudo Genes (ambiguous residues) :: 0 of 100
            Pseudo Genes (frameshifted)       :: 26 of 100
            Pseudo Genes (incomplete)         :: 77 of 100
            Pseudo Genes (internal stop)      :: 4 of 100
            Pseudo Genes (multiple problems)  :: 6 of 100
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6701567
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-42"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2019"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXIO010000001-JAIXIO010000128
WGS_SCAFLD  NZ_JAIXIO010000001-NZ_JAIXIO010000128
//
LOCUS       NZ_JAIXKA010000000   7017436 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-04, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXKA000000000
VERSION     NZ_JAIXKA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906720
            Assembly: GCF_045795625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7017436)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7017436)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXKA000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXKA000000000.  This version of the
            project (01) has the accession number NZ_JAIXKA010000000, and
            consists of sequences JAIXKA010000001-JAIXKA010000165.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 70x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795625.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:54:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,709
            CDSs (total)                      :: 6,643
            Genes (coding)                    :: 6,503
            CDSs (with protein)               :: 6,503
            Genes (RNA)                       :: 66
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 140
            CDSs (without protein)            :: 140
            Pseudo Genes (ambiguous residues) :: 0 of 140
            Pseudo Genes (frameshifted)       :: 35 of 140
            Pseudo Genes (incomplete)         :: 107 of 140
            Pseudo Genes (internal stop)      :: 9 of 140
            Pseudo Genes (multiple problems)  :: 11 of 140
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7017436
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-04"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2008"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXKA010000001-JAIXKA010000165
WGS_SCAFLD  NZ_JAIXKA010000001-NZ_JAIXKA010000165
//
LOCUS       NZ_JAIXIY010000000   6903774 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-32, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXIY000000000
VERSION     NZ_JAIXIY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906748
            Assembly: GCF_045795105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6903774)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6903774)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXIY000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXIY000000000.  This version of the
            project (01) has the accession number NZ_JAIXIY010000000, and
            consists of sequences JAIXIY010000001-JAIXIY010000189.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 137x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795105.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:54:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,548
            CDSs (total)                      :: 6,482
            Genes (coding)                    :: 6,324
            CDSs (with protein)               :: 6,324
            Genes (RNA)                       :: 66
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 57
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 158
            CDSs (without protein)            :: 158
            Pseudo Genes (ambiguous residues) :: 0 of 158
            Pseudo Genes (frameshifted)       :: 33 of 158
            Pseudo Genes (incomplete)         :: 132 of 158
            Pseudo Genes (internal stop)      :: 13 of 158
            Pseudo Genes (multiple problems)  :: 17 of 158
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6903774
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-32"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2016"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXIY010000001-JAIXIY010000189
WGS_SCAFLD  NZ_JAIXIY010000001-NZ_JAIXIY010000189
//
LOCUS       NZ_JBHOAC010000000   6863213 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain DGLTL9, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBHOAC000000000
VERSION     NZ_JBHOAC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43881916
            Assembly: GCF_045797965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6863213)
  AUTHORS   Rathod,M. and Gajjar,D.
  TITLE     Whole Genome Sequencing of pathogenic Pseudomonas aeruginosa from
            Western part of India
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6863213)
  AUTHORS   Rathod,M. and Gajjar,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-SEP-2024) Department of Microbiology and
            Biotechnology Centre, The Maharaja Sayajirao University of Baroda,
            Pratapgunj, Vadodara 390002, India
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBHOAC000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JBHOAC000000000.  This version of the
            project (01) has the accession number NZ_JBHOAC010000000, and
            consists of sequences JBHOAC010000001-JBHOAC010000108.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2021
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045797965.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:25:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,465
            CDSs (total)                      :: 6,400
            Genes (coding)                    :: 6,280
            CDSs (with protein)               :: 6,280
            Genes (RNA)                       :: 65
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 120
            CDSs (without protein)            :: 120
            Pseudo Genes (ambiguous residues) :: 0 of 120
            Pseudo Genes (frameshifted)       :: 33 of 120
            Pseudo Genes (incomplete)         :: 93 of 120
            Pseudo Genes (internal stop)      :: 5 of 120
            Pseudo Genes (multiple problems)  :: 10 of 120
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6863213
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="DGLTL9"
                     /isolation_source="urinary tract infection"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="India: Gujarat"
                     /collection_date="2021"
                     /collected_by="Milan Rathod"
WGS         JBHOAC010000001-JBHOAC010000108
WGS_SCAFLD  NZ_JBHOAC010000001-NZ_JBHOAC010000108
//
LOCUS       NZ_JAIXJH010000000   7077062 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-23, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXJH000000000
VERSION     NZ_JAIXJH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906739
            Assembly: GCF_045795265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7077062)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7077062)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXJH000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXJH000000000.  This version of the
            project (01) has the accession number NZ_JAIXJH010000000, and
            consists of sequences JAIXJH010000001-JAIXJH010000216.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 179x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795265.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:04:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,727
            CDSs (total)                      :: 6,656
            Genes (coding)                    :: 6,542
            CDSs (with protein)               :: 6,542
            Genes (RNA)                       :: 71
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 114
            CDSs (without protein)            :: 114
            Pseudo Genes (ambiguous residues) :: 0 of 114
            Pseudo Genes (frameshifted)       :: 19 of 114
            Pseudo Genes (incomplete)         :: 97 of 114
            Pseudo Genes (internal stop)      :: 5 of 114
            Pseudo Genes (multiple problems)  :: 6 of 114
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7077062
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-23"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2015"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXJH010000001-JAIXJH010000216
WGS_SCAFLD  NZ_JAIXJH010000001-NZ_JAIXJH010000216
//
LOCUS       NZ_JBGFFJ010000000   8012358 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudorhodoferax sp. LjRoot208, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBGFFJ000000000
VERSION     NZ_JBGFFJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN42959553
            Assembly: GCF_056175705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudorhodoferax sp. LjRoot208
  ORGANISM  Pseudorhodoferax sp. LjRoot208
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae.
REFERENCE   1  (bases 1 to 8012358)
  AUTHORS   Selten,G., Lamouche,F., Gomez Repolles,A., Tao,K., Blahovska,Z. and
            Radutoiu,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-AUG-2024) Plant-Microbe Interactions, Utrecht
            University, Padualaan 8, Utrecht, Utrecht 3584 CH, Netherlands
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGFFJ000000000.1.
            The Pseudorhodoferax sp. LjRoot208 whole genome shotgun (WGS)
            project has the project accession NZ_JBGFFJ000000000.  This version
            of the project (01) has the accession number NZ_JBGFFJ010000000,
            and consists of sequences JBGFFJ010000001-JBGFFJ010000452.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: A5 v. A5-miseq version 20160825
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 45x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056175705.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 18:25:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,877
            CDSs (total)                      :: 7,814
            Genes (coding)                    :: 7,626
            CDSs (with protein)               :: 7,626
            Genes (RNA)                       :: 63
            rRNAs                             :: 4, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 188
            CDSs (without protein)            :: 188
            Pseudo Genes (ambiguous residues) :: 0 of 188
            Pseudo Genes (frameshifted)       :: 22 of 188
            Pseudo Genes (incomplete)         :: 172 of 188
            Pseudo Genes (internal stop)      :: 3 of 188
            Pseudo Genes (multiple problems)  :: 8 of 188
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8012358
                     /organism="Pseudorhodoferax sp. LjRoot208"
                     /mol_type="genomic DNA"
                     /strain="LjRoot208"
                     /isolation_source="root"
                     /host="Lotus japonicus Gifu"
                     /db_xref="taxon:3240878"
                     /geo_loc_name="Germany: Cologne"
                     /collection_date="2017"
                     /identified_by="Gijs Selten and Adrian Gomez Repolles"
WGS         JBGFFJ010000001-JBGFFJ010000452
WGS_SCAFLD  NZ_JBGFFJ010000001-NZ_JBGFFJ010000452
//
LOCUS       NZ_JAIXIU010000000   7365877 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-36, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXIU000000000
VERSION     NZ_JAIXIU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906752
            Assembly: GCF_045795005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 7365877)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7365877)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXIU000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXIU000000000.  This version of the
            project (01) has the accession number NZ_JAIXIU010000000, and
            consists of sequences JAIXIU010000001-JAIXIU010000189.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 94x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795005.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:07:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,126
            CDSs (total)                      :: 7,060
            Genes (coding)                    :: 6,910
            CDSs (with protein)               :: 6,910
            Genes (RNA)                       :: 66
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 150
            CDSs (without protein)            :: 150
            Pseudo Genes (ambiguous residues) :: 0 of 150
            Pseudo Genes (frameshifted)       :: 34 of 150
            Pseudo Genes (incomplete)         :: 121 of 150
            Pseudo Genes (internal stop)      :: 6 of 150
            Pseudo Genes (multiple problems)  :: 11 of 150
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7365877
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-36"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2017"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXIU010000001-JAIXIU010000189
WGS_SCAFLD  NZ_JAIXIU010000001-NZ_JAIXIU010000189
//
LOCUS       NZ_JAJSQE010000000   6331005 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas alloputida strain NMI5075_10, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAJSQE000000000
VERSION     NZ_JAJSQE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN23773721
            Assembly: GCF_021282805.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas alloputida
  ORGANISM  Pseudomonas alloputida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6331005)
  AUTHORS   Urbanowicz,P., Izdebski,R., Biedrzycka,M., Literacka,E. and
            Gniadkowski,M.
  TITLE     Molecular epidemiology of MBL-producing Pseudomonas putida group in
            Poland, 2003-2016
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6331005)
  AUTHORS   Urbanowicz,P., Izdebski,R. and Gniadkowski,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-DEC-2021) Molecular Microbiology, National Medicines
            Institute, Chelmska 30/34, Warsaw 00-725, Poland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAJSQE000000000.1.
            The Pseudomonas alloputida whole genome shotgun (WGS) project has
            the project accession NZ_JAJSQE000000000.  This version of the
            project (01) has the accession number NZ_JAJSQE010000000, and
            consists of sequences JAJSQE010000001-JAJSQE010000131.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 01-FEB-2019
            Assembly Method        :: SPAdes v. 3.10. 0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 40x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_021282805.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:56:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,019
            CDSs (total)                      :: 5,941
            Genes (coding)                    :: 5,785
            CDSs (with protein)               :: 5,785
            Genes (RNA)                       :: 78
            rRNAs                             :: 8, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 62
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 156
            CDSs (without protein)            :: 156
            Pseudo Genes (ambiguous residues) :: 0 of 156
            Pseudo Genes (frameshifted)       :: 31 of 156
            Pseudo Genes (incomplete)         :: 125 of 156
            Pseudo Genes (internal stop)      :: 15 of 156
            Pseudo Genes (multiple problems)  :: 14 of 156
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6331005
                     /organism="Pseudomonas alloputida"
                     /mol_type="genomic DNA"
                     /strain="NMI5075_10"
                     /isolation_source="ulcer swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:2093743"
                     /geo_loc_name="Poland: Suwalki"
                     /collection_date="2010-08-25"
                     /collected_by="National Medicines Institute"
                     /genotype="ST76"
WGS         JAJSQE010000001-JAJSQE010000131
WGS_SCAFLD  NZ_JAJSQE010000001-NZ_JAJSQE010000131
//
LOCUS       NZ_CDVEYI010000000   2977965 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Qipengyuania citrea isolate MarMAG_113966, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVEYI000000000
VERSION     NZ_CDVEYI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737205
            Assembly: GCF_977666875.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Qipengyuania citrea (marine sediment metagenome)
  ORGANISM  Qipengyuania citrea
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Qipengyuania.
REFERENCE   1  (bases 1 to 2977965)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVEYI000000000.1.
            The Qipengyuania citrea whole genome shotgun (WGS) project has the
            project accession NZ_CDVEYI000000000.  This version of the project
            (01) has the accession number NZ_CDVEYI010000000, and consists of
            sequences CDVEYI010000001-CDVEYI010000008.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977666875.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:24:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,972
            CDSs (total)                      :: 2,928
            Genes (coding)                    :: 2,914
            CDSs (with protein)               :: 2,914
            Genes (RNA)                       :: 44
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 14
            CDSs (without protein)            :: 14
            Pseudo Genes (ambiguous residues) :: 0 of 14
            Pseudo Genes (frameshifted)       :: 3 of 14
            Pseudo Genes (incomplete)         :: 9 of 14
            Pseudo Genes (internal stop)      :: 3 of 14
            Pseudo Genes (multiple problems)  :: 1 of 14
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2977965
                     /organism="Qipengyuania citrea"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_113966"
                     /db_xref="taxon:225971"
                     /environmental_sample
                     /geo_loc_name="Atlantic Ocean"
                     /metagenome_source="marine sediment metagenome"
                     /metagenomic
WGS         CDVEYI010000001-CDVEYI010000008
WGS_SCAFLD  NZ_CDVEYI010000001-NZ_CDVEYI010000008
//
LOCUS       NZ_JAIXJU010000000   6853013 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-10, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXJU000000000
VERSION     NZ_JAIXJU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906726
            Assembly: GCF_045795535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6853013)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6853013)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXJU000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXJU000000000.  This version of the
            project (01) has the accession number NZ_JAIXJU010000000, and
            consists of sequences JAIXJU010000001-JAIXJU010000222.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 63x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795535.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:13:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,561
            CDSs (total)                      :: 6,497
            Genes (coding)                    :: 6,364
            CDSs (with protein)               :: 6,364
            Genes (RNA)                       :: 64
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 20 of 133
            Pseudo Genes (incomplete)         :: 117 of 133
            Pseudo Genes (internal stop)      :: 7 of 133
            Pseudo Genes (multiple problems)  :: 9 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6853013
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-10"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2011"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXJU010000001-JAIXJU010000222
WGS_SCAFLD  NZ_JAIXJU010000001-NZ_JAIXJU010000222
//
LOCUS       NZ_JBLTSN010000000   6776977 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas alloputida strain LACPHL-BACT-2024-00420, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JBLTSN000000000
VERSION     NZ_JBLTSN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45522501
            Assembly: GCF_048065655.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas alloputida
  ORGANISM  Pseudomonas alloputida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6776977)
  AUTHORS   Fox,E.B., Garrigues,J.M. and Green,N.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-DEC-2024) Los Angeles County Public Health
            Laboratories, Los Angeles County Public Health Lab microbial
            pathogen submission group, 12750 Erickson Avenue, Downey, CA 90242,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBLTSN000000000.1.
            The Pseudomonas alloputida whole genome shotgun (WGS) project has
            the project accession NZ_JBLTSN000000000.  This version of the
            project (01) has the accession number NZ_JBLTSN010000000, and
            consists of sequences JBLTSN010000001-JBLTSN010000220.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill-SKESA v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 40.27x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_048065655.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:13:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,440
            CDSs (total)                      :: 6,370
            Genes (coding)                    :: 6,165
            CDSs (with protein)               :: 6,165
            Genes (RNA)                       :: 70
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 205
            CDSs (without protein)            :: 205
            Pseudo Genes (ambiguous residues) :: 0 of 205
            Pseudo Genes (frameshifted)       :: 52 of 205
            Pseudo Genes (incomplete)         :: 157 of 205
            Pseudo Genes (internal stop)      :: 31 of 205
            Pseudo Genes (multiple problems)  :: 31 of 205
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6776977
                     /organism="Pseudomonas alloputida"
                     /mol_type="genomic DNA"
                     /strain="LACPHL-BACT-2024-00420"
                     /isolation_source="environmental"
                     /db_xref="taxon:2093743"
                     /geo_loc_name="USA: California"
                     /collection_date="2024-10-07"
WGS         JBLTSN010000001-JBLTSN010000220
WGS_SCAFLD  NZ_JBLTSN010000001-NZ_JBLTSN010000220
//
LOCUS       NZ_CDVLLJ010000000   2855337 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Qipengyuania flava isolate MarMAG_118363, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CDVLLJ000000000
VERSION     NZ_CDVLLJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737297
            Assembly: GCF_977710735.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Qipengyuania flava (marine metagenome)
  ORGANISM  Qipengyuania flava
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Erythrobacteraceae; Qipengyuania.
REFERENCE   1  (bases 1 to 2855337)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVLLJ000000000.1.
            The Qipengyuania flava whole genome shotgun (WGS) project has the
            project accession NZ_CDVLLJ000000000.  This version of the project
            (01) has the accession number NZ_CDVLLJ010000000, and consists of
            sequences CDVLLJ010000001-CDVLLJ010000080.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977710735.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:19:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,872
            CDSs (total)                      :: 2,827
            Genes (coding)                    :: 2,800
            CDSs (with protein)               :: 2,800
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1 (23S)
            tRNAs                             :: 39
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 27
            CDSs (without protein)            :: 27
            Pseudo Genes (ambiguous residues) :: 0 of 27
            Pseudo Genes (frameshifted)       :: 0 of 27
            Pseudo Genes (incomplete)         :: 25 of 27
            Pseudo Genes (internal stop)      :: 2 of 27
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2855337
                     /organism="Qipengyuania flava"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_118363"
                     /isolation_source="Mariana Trench, free-living
                     microorganism abyssal water (4,000 m)"
                     /db_xref="taxon:192812"
                     /environmental_sample
                     /geo_loc_name="Pacific Ocean"
                     /collection_date="2016-09-15"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVLLJ010000001-CDVLLJ010000080
WGS_SCAFLD  NZ_CDVLLJ010000001-NZ_CDVLLJ010000080
//
LOCUS       NZ_JAIXJL010000000   6797235 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas aeruginosa strain PAN-19, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAIXJL000000000
VERSION     NZ_JAIXJL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN21906735
            Assembly: GCF_045795305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas aeruginosa
  ORGANISM  Pseudomonas aeruginosa
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6797235)
  AUTHORS   Haldorsen,B., Samuelsen,O., Josefsen,E., Janice,J., Sundsfjord,A.
            and Pedersen,T.
  TITLE     Characterization of carbapenemase-producing P. aeruginosa isolated
            in Norway during 2006-2020
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6797235)
  AUTHORS   Pedersen,T. and James,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2021) Department of Microbiology and Infection
            Control, Norwegian National Advisory Unit on Detection of
            Antimicrobial Resistance, Sykehusveien 38, Tromso, Troms 9038,
            Norway
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAIXJL000000000.1.
            The Pseudomonas aeruginosa whole genome shotgun (WGS) project has
            the project accession NZ_JAIXJL000000000.  This version of the
            project (01) has the accession number NZ_JAIXJL010000000, and
            consists of sequences JAIXJL010000001-JAIXJL010000220.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.19
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 51x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045795305.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:12:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,534
            CDSs (total)                      :: 6,472
            Genes (coding)                    :: 6,333
            CDSs (with protein)               :: 6,333
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 139
            CDSs (without protein)            :: 139
            Pseudo Genes (ambiguous residues) :: 0 of 139
            Pseudo Genes (frameshifted)       :: 20 of 139
            Pseudo Genes (incomplete)         :: 121 of 139
            Pseudo Genes (internal stop)      :: 5 of 139
            Pseudo Genes (multiple problems)  :: 6 of 139
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6797235
                     /organism="Pseudomonas aeruginosa"
                     /mol_type="genomic DNA"
                     /strain="PAN-19"
                     /host="Homo sapiens"
                     /db_xref="taxon:287"
                     /geo_loc_name="Norway"
                     /lat_lon="69.68 N 18.98 E"
                     /collection_date="2014"
                     /collected_by="Norwegian National Advisory Unit on
                     Detection of Antimicrobial Resistance"
WGS         JAIXJL010000001-JAIXJL010000220
WGS_SCAFLD  NZ_JAIXJL010000001-NZ_JAIXJL010000220
//
LOCUS       NZ_JAJSQH010000000   6453510 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas alloputida strain NMI579_11, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAJSQH000000000
VERSION     NZ_JAJSQH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN23773724
            Assembly: GCF_021282685.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas alloputida
  ORGANISM  Pseudomonas alloputida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6453510)
  AUTHORS   Urbanowicz,P., Izdebski,R., Biedrzycka,M., Literacka,E. and
            Gniadkowski,M.
  TITLE     Molecular epidemiology of MBL-producing Pseudomonas putida group in
            Poland, 2003-2016
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6453510)
  AUTHORS   Urbanowicz,P., Izdebski,R. and Gniadkowski,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-DEC-2021) Molecular Microbiology, National Medicines
            Institute, Chelmska 30/34, Warsaw 00-725, Poland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAJSQH000000000.1.
            The Pseudomonas alloputida whole genome shotgun (WGS) project has
            the project accession NZ_JAJSQH000000000.  This version of the
            project (01) has the accession number NZ_JAJSQH010000000, and
            consists of sequences JAJSQH010000001-JAJSQH010000162.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 01-FEB-2019
            Assembly Method        :: SPAdes v. 3.10. 0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 40x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_021282685.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:52:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,088
            CDSs (total)                      :: 6,016
            Genes (coding)                    :: 5,853
            CDSs (with protein)               :: 5,853
            Genes (RNA)                       :: 72
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 163
            CDSs (without protein)            :: 163
            Pseudo Genes (ambiguous residues) :: 0 of 163
            Pseudo Genes (frameshifted)       :: 40 of 163
            Pseudo Genes (incomplete)         :: 124 of 163
            Pseudo Genes (internal stop)      :: 18 of 163
            Pseudo Genes (multiple problems)  :: 17 of 163
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6453510
                     /organism="Pseudomonas alloputida"
                     /mol_type="genomic DNA"
                     /strain="NMI579_11"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:2093743"
                     /geo_loc_name="Poland: Gdynia"
                     /collection_date="2011-02-14"
                     /collected_by="National Medicines Institute"
                     /genotype="ST69"
WGS         JAJSQH010000001-JAJSQH010000162
WGS_SCAFLD  NZ_JAJSQH010000001-NZ_JAJSQH010000162
//
LOCUS       NZ_CDVEAT010000000   4076360 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Pseudooceanicola atlanticus isolate MarMAG_005381, whole
            genome shotgun sequencing project.
ACCESSION   NZ_CDVEAT000000000
VERSION     NZ_CDVEAT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737383
            Assembly: GCF_977660625.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Pseudooceanicola atlanticus (marine metagenome)
  ORGANISM  Pseudooceanicola atlanticus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Pseudooceanicola.
REFERENCE   1  (bases 1 to 4076360)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVEAT000000000.1.
            The Pseudooceanicola atlanticus whole genome shotgun (WGS) project
            has the project accession NZ_CDVEAT000000000.  This version of the
            project (01) has the accession number NZ_CDVEAT010000000, and
            consists of sequences CDVEAT010000001-CDVEAT010000189.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977660625.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:25:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,098
            CDSs (total)                      :: 4,061
            Genes (coding)                    :: 3,970
            CDSs (with protein)               :: 3,970
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 91
            CDSs (without protein)            :: 91
            Pseudo Genes (ambiguous residues) :: 0 of 91
            Pseudo Genes (frameshifted)       :: 8 of 91
            Pseudo Genes (incomplete)         :: 79 of 91
            Pseudo Genes (internal stop)      :: 8 of 91
            Pseudo Genes (multiple problems)  :: 4 of 91
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4076360
                     /organism="Pseudooceanicola atlanticus"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_005381"
                     /isolation_source="Mariana Trench, free-living
                     microorganism in surface water"
                     /db_xref="taxon:1461694"
                     /environmental_sample
                     /geo_loc_name="Pacific Ocean"
                     /collection_date="2016-09-15"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVEAT010000001-CDVEAT010000189
WGS_SCAFLD  NZ_CDVEAT010000001-NZ_CDVEAT010000189
//
LOCUS       NZ_JAJSQG010000000   6337608 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas alloputida strain NMI1537_10, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAJSQG000000000
VERSION     NZ_JAJSQG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN23773723
            Assembly: GCF_021282705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas alloputida
  ORGANISM  Pseudomonas alloputida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6337608)
  AUTHORS   Urbanowicz,P., Izdebski,R., Biedrzycka,M., Literacka,E. and
            Gniadkowski,M.
  TITLE     Molecular epidemiology of MBL-producing Pseudomonas putida group in
            Poland, 2003-2016
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6337608)
  AUTHORS   Urbanowicz,P., Izdebski,R. and Gniadkowski,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-DEC-2021) Molecular Microbiology, National Medicines
            Institute, Chelmska 30/34, Warsaw 00-725, Poland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAJSQG000000000.1.
            The Pseudomonas alloputida whole genome shotgun (WGS) project has
            the project accession NZ_JAJSQG000000000.  This version of the
            project (01) has the accession number NZ_JAJSQG010000000, and
            consists of sequences JAJSQG010000001-JAJSQG010000192.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 01-FEB-2019
            Assembly Method        :: SPAdes v. 3.10. 0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 40x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_021282705.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:49:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,955
            CDSs (total)                      :: 5,880
            Genes (coding)                    :: 5,706
            CDSs (with protein)               :: 5,706
            Genes (RNA)                       :: 75
            rRNAs                             :: 6, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 174
            CDSs (without protein)            :: 174
            Pseudo Genes (ambiguous residues) :: 0 of 174
            Pseudo Genes (frameshifted)       :: 36 of 174
            Pseudo Genes (incomplete)         :: 154 of 174
            Pseudo Genes (internal stop)      :: 13 of 174
            Pseudo Genes (multiple problems)  :: 26 of 174
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6337608
                     /organism="Pseudomonas alloputida"
                     /mol_type="genomic DNA"
                     /strain="NMI1537_10"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:2093743"
                     /geo_loc_name="Poland: Warszawa"
                     /collection_date="2010"
                     /collected_by="National Medicines Institute"
                     /genotype="ST77"
WGS         JAJSQG010000001-JAJSQG010000192
WGS_SCAFLD  NZ_JAJSQG010000001-NZ_JAJSQG010000192
//
LOCUS       NZ_JAJSRI010000000   6374204 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas alloputida strain NMI1498_14, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAJSRI000000000
VERSION     NZ_JAJSRI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN23773751
            Assembly: GCF_021283485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas alloputida
  ORGANISM  Pseudomonas alloputida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6374204)
  AUTHORS   Urbanowicz,P., Izdebski,R., Biedrzycka,M., Literacka,E. and
            Gniadkowski,M.
  TITLE     Molecular epidemiology of MBL-producing Pseudomonas putida group in
            Poland, 2003-2016
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6374204)
  AUTHORS   Urbanowicz,P., Izdebski,R. and Gniadkowski,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-DEC-2021) Molecular Microbiology, National Medicines
            Institute, Chelmska 30/34, Warsaw 00-725, Poland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAJSRI000000000.1.
            The Pseudomonas alloputida whole genome shotgun (WGS) project has
            the project accession NZ_JAJSRI000000000.  This version of the
            project (01) has the accession number NZ_JAJSRI010000000, and
            consists of sequences JAJSRI010000001-JAJSRI010000165.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 01-FEB-2019
            Assembly Method        :: SPAdes v. 3.10. 0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 40x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_021283485.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:52:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,007
            CDSs (total)                      :: 5,937
            Genes (coding)                    :: 5,771
            CDSs (with protein)               :: 5,771
            Genes (RNA)                       :: 70
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 42 of 166
            Pseudo Genes (incomplete)         :: 125 of 166
            Pseudo Genes (internal stop)      :: 18 of 166
            Pseudo Genes (multiple problems)  :: 17 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6374204
                     /organism="Pseudomonas alloputida"
                     /mol_type="genomic DNA"
                     /strain="NMI1498_14"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:2093743"
                     /geo_loc_name="Poland: Chorzow"
                     /collection_date="2014-03-18"
                     /collected_by="National Medicines Institute"
                     /genotype="ST69"
WGS         JAJSRI010000001-JAJSRI010000165
WGS_SCAFLD  NZ_JAJSRI010000001-NZ_JAJSRI010000165
//
LOCUS       NZ_CDVGXB010000000   4124500 bp    DNA     linear   ENV 26-MAR-2026
DEFINITION  MAG: Pseudooceanicola atlanticus isolate MarMAG_005385, whole
            genome shotgun sequencing project.
ACCESSION   NZ_CDVGXB000000000
VERSION     NZ_CDVGXB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737577
            Assembly: GCF_977679975.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Pseudooceanicola atlanticus (marine metagenome)
  ORGANISM  Pseudooceanicola atlanticus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Paracoccaceae; Pseudooceanicola.
REFERENCE   1  (bases 1 to 4124500)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVGXB000000000.1.
            The Pseudooceanicola atlanticus whole genome shotgun (WGS) project
            has the project accession NZ_CDVGXB000000000.  This version of the
            project (01) has the accession number NZ_CDVGXB010000000, and
            consists of sequences CDVGXB010000001-CDVGXB010000179.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977679975.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:33:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,123
            CDSs (total)                      :: 4,088
            Genes (coding)                    :: 4,004
            CDSs (with protein)               :: 4,004
            Genes (RNA)                       :: 35
            tRNAs                             :: 32
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 84
            CDSs (without protein)            :: 84
            Pseudo Genes (ambiguous residues) :: 0 of 84
            Pseudo Genes (frameshifted)       :: 7 of 84
            Pseudo Genes (incomplete)         :: 71 of 84
            Pseudo Genes (internal stop)      :: 8 of 84
            Pseudo Genes (multiple problems)  :: 2 of 84
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4124500
                     /organism="Pseudooceanicola atlanticus"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_005385"
                     /isolation_source="Mariana Trench, free-living
                     microorganism hadal water (9,600 m)"
                     /db_xref="taxon:1461694"
                     /environmental_sample
                     /geo_loc_name="Pacific Ocean"
                     /collection_date="2016-09-16"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVGXB010000001-CDVGXB010000179
WGS_SCAFLD  NZ_CDVGXB010000001-NZ_CDVGXB010000179
//
LOCUS       NZ_JAJSPO010000000   6758884 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas alloputida strain NMI2596_03, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAJSPO000000000
VERSION     NZ_JAJSPO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN23773705
            Assembly: GCF_021284725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas alloputida
  ORGANISM  Pseudomonas alloputida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6758884)
  AUTHORS   Urbanowicz,P., Izdebski,R., Biedrzycka,M., Literacka,E. and
            Gniadkowski,M.
  TITLE     Molecular epidemiology of MBL-producing Pseudomonas putida group in
            Poland, 2003-2016
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6758884)
  AUTHORS   Urbanowicz,P., Izdebski,R. and Gniadkowski,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-DEC-2021) Molecular Microbiology, National Medicines
            Institute, Chelmska 30/34, Warsaw 00-725, Poland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAJSPO000000000.1.
            The Pseudomonas alloputida whole genome shotgun (WGS) project has
            the project accession NZ_JAJSPO000000000.  This version of the
            project (01) has the accession number NZ_JAJSPO010000000, and
            consists of sequences JAJSPO010000001-JAJSPO010000152.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 01-FEB-2019
            Assembly Method        :: SPAdes v. 3.10. 0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 40x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_021284725.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:11:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,450
            CDSs (total)                      :: 6,376
            Genes (coding)                    :: 6,214
            CDSs (with protein)               :: 6,214
            Genes (RNA)                       :: 74
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 162
            CDSs (without protein)            :: 162
            Pseudo Genes (ambiguous residues) :: 0 of 162
            Pseudo Genes (frameshifted)       :: 41 of 162
            Pseudo Genes (incomplete)         :: 125 of 162
            Pseudo Genes (internal stop)      :: 15 of 162
            Pseudo Genes (multiple problems)  :: 17 of 162
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6758884
                     /organism="Pseudomonas alloputida"
                     /mol_type="genomic DNA"
                     /strain="NMI2596_03"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:2093743"
                     /geo_loc_name="Poland: Warszawa"
                     /collection_date="2003-09-27"
                     /collected_by="National Medicines Institute"
                     /genotype="ST69"
WGS         JAJSPO010000001-JAJSPO010000152
WGS_SCAFLD  NZ_JAJSPO010000001-NZ_JAJSPO010000152
//
LOCUS       NZ_JBKAFO010000000   6630208 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas alloputida strain LACPHL-BACT-2024-00436, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JBKAFO000000000
VERSION     NZ_JBKAFO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45897373
            Assembly: GCF_046269045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas alloputida
  ORGANISM  Pseudomonas alloputida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6630208)
  AUTHORS   Fox,E.B., Garrigues,J.M. and Green,N.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-DEC-2024) Los Angeles County Public Health
            Laboratories, Los Angeles County Public Health Lab microbial
            pathogen submission group, 12750 Erickson Avenue, Downey, CA 90242,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBKAFO000000000.1.
            The Pseudomonas alloputida whole genome shotgun (WGS) project has
            the project accession NZ_JBKAFO000000000.  This version of the
            project (01) has the accession number NZ_JBKAFO010000000, and
            consists of sequences JBKAFO010000001-JBKAFO010000175.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill-SKESA v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 44.11x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_046269045.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:13:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,254
            CDSs (total)                      :: 6,178
            Genes (coding)                    :: 6,013
            CDSs (with protein)               :: 6,013
            Genes (RNA)                       :: 76
            rRNAs                             :: 4, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 165
            CDSs (without protein)            :: 165
            Pseudo Genes (ambiguous residues) :: 0 of 165
            Pseudo Genes (frameshifted)       :: 43 of 165
            Pseudo Genes (incomplete)         :: 125 of 165
            Pseudo Genes (internal stop)      :: 22 of 165
            Pseudo Genes (multiple problems)  :: 23 of 165
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6630208
                     /organism="Pseudomonas alloputida"
                     /mol_type="genomic DNA"
                     /strain="LACPHL-BACT-2024-00436"
                     /isolation_source="environmental"
                     /db_xref="taxon:2093743"
                     /geo_loc_name="USA: California"
                     /collection_date="2024-10-07"
WGS         JBKAFO010000001-JBKAFO010000175
WGS_SCAFLD  NZ_JBKAFO010000001-NZ_JBKAFO010000175
//
LOCUS       NZ_JAJSPR010000000   6437493 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas alloputida strain NMI2441_06, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAJSPR000000000
VERSION     NZ_JAJSPR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN23773708
            Assembly: GCF_021282585.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas alloputida
  ORGANISM  Pseudomonas alloputida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6437493)
  AUTHORS   Urbanowicz,P., Izdebski,R., Biedrzycka,M., Literacka,E. and
            Gniadkowski,M.
  TITLE     Molecular epidemiology of MBL-producing Pseudomonas putida group in
            Poland, 2003-2016
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6437493)
  AUTHORS   Urbanowicz,P., Izdebski,R. and Gniadkowski,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-DEC-2021) Molecular Microbiology, National Medicines
            Institute, Chelmska 30/34, Warsaw 00-725, Poland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAJSPR000000000.1.
            The Pseudomonas alloputida whole genome shotgun (WGS) project has
            the project accession NZ_JAJSPR000000000.  This version of the
            project (01) has the accession number NZ_JAJSPR010000000, and
            consists of sequences JAJSPR010000001-JAJSPR010000151.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 01-FEB-2019
            Assembly Method        :: SPAdes v. 3.10. 0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 40x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_021282585.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:02:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,064
            CDSs (total)                      :: 5,990
            Genes (coding)                    :: 5,831
            CDSs (with protein)               :: 5,831
            Genes (RNA)                       :: 74
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 159
            CDSs (without protein)            :: 159
            Pseudo Genes (ambiguous residues) :: 0 of 159
            Pseudo Genes (frameshifted)       :: 40 of 159
            Pseudo Genes (incomplete)         :: 122 of 159
            Pseudo Genes (internal stop)      :: 16 of 159
            Pseudo Genes (multiple problems)  :: 17 of 159
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6437493
                     /organism="Pseudomonas alloputida"
                     /mol_type="genomic DNA"
                     /strain="NMI2441_06"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:2093743"
                     /geo_loc_name="Poland: Koscierzyna"
                     /collection_date="2006-10-28"
                     /collected_by="National Medicines Institute"
                     /genotype="ST69"
WGS         JAJSPR010000001-JAJSPR010000151
WGS_SCAFLD  NZ_JAJSPR010000001-NZ_JAJSPR010000151
//
LOCUS       NZ_JAJSPP010000000   6456543 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas alloputida strain NMI2153_05, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAJSPP000000000
VERSION     NZ_JAJSPP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN23773706
            Assembly: GCF_021284705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas alloputida
  ORGANISM  Pseudomonas alloputida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6456543)
  AUTHORS   Urbanowicz,P., Izdebski,R., Biedrzycka,M., Literacka,E. and
            Gniadkowski,M.
  TITLE     Molecular epidemiology of MBL-producing Pseudomonas putida group in
            Poland, 2003-2016
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6456543)
  AUTHORS   Urbanowicz,P., Izdebski,R. and Gniadkowski,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-DEC-2021) Molecular Microbiology, National Medicines
            Institute, Chelmska 30/34, Warsaw 00-725, Poland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAJSPP000000000.1.
            The Pseudomonas alloputida whole genome shotgun (WGS) project has
            the project accession NZ_JAJSPP000000000.  This version of the
            project (01) has the accession number NZ_JAJSPP010000000, and
            consists of sequences JAJSPP010000001-JAJSPP010000145.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 01-FEB-2019
            Assembly Method        :: SPAdes v. 3.10. 0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 40x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_021284705.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:02:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,081
            CDSs (total)                      :: 6,008
            Genes (coding)                    :: 5,849
            CDSs (with protein)               :: 5,849
            Genes (RNA)                       :: 73
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 159
            CDSs (without protein)            :: 159
            Pseudo Genes (ambiguous residues) :: 0 of 159
            Pseudo Genes (frameshifted)       :: 40 of 159
            Pseudo Genes (incomplete)         :: 122 of 159
            Pseudo Genes (internal stop)      :: 16 of 159
            Pseudo Genes (multiple problems)  :: 17 of 159
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6456543
                     /organism="Pseudomonas alloputida"
                     /mol_type="genomic DNA"
                     /strain="NMI2153_05"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:2093743"
                     /geo_loc_name="Poland: Poznan"
                     /collection_date="2005-06-05"
                     /collected_by="National Medicines Institute"
                     /genotype="ST69"
WGS         JAJSPP010000001-JAJSPP010000145
WGS_SCAFLD  NZ_JAJSPP010000001-NZ_JAJSPP010000145
//
LOCUS       NZ_JBLTSK010000000   6780680 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas alloputida strain LACPHL-BACT-2024-00423, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JBLTSK000000000
VERSION     NZ_JBLTSK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45522504
            Assembly: GCF_048065595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas alloputida
  ORGANISM  Pseudomonas alloputida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6780680)
  AUTHORS   Fox,E.B., Garrigues,J.M. and Green,N.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-DEC-2024) Los Angeles County Public Health
            Laboratories, Los Angeles County Public Health Lab microbial
            pathogen submission group, 12750 Erickson Avenue, Downey, CA 90242,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBLTSK000000000.1.
            The Pseudomonas alloputida whole genome shotgun (WGS) project has
            the project accession NZ_JBLTSK000000000.  This version of the
            project (01) has the accession number NZ_JBLTSK010000000, and
            consists of sequences JBLTSK010000001-JBLTSK010000221.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill-SKESA v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 43.65x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_048065595.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:06:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,441
            CDSs (total)                      :: 6,365
            Genes (coding)                    :: 6,168
            CDSs (with protein)               :: 6,168
            Genes (RNA)                       :: 76
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 197
            CDSs (without protein)            :: 197
            Pseudo Genes (ambiguous residues) :: 0 of 197
            Pseudo Genes (frameshifted)       :: 51 of 197
            Pseudo Genes (incomplete)         :: 148 of 197
            Pseudo Genes (internal stop)      :: 31 of 197
            Pseudo Genes (multiple problems)  :: 30 of 197
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6780680
                     /organism="Pseudomonas alloputida"
                     /mol_type="genomic DNA"
                     /strain="LACPHL-BACT-2024-00423"
                     /isolation_source="environmental"
                     /db_xref="taxon:2093743"
                     /geo_loc_name="USA: California"
                     /collection_date="2024-10-07"
WGS         JBLTSK010000001-JBLTSK010000221
WGS_SCAFLD  NZ_JBLTSK010000001-NZ_JBLTSK010000221
//
LOCUS       NZ_JBWCAM010000000   6880427 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas sp. JC1203, whole genome shotgun sequencing project.
ACCESSION   NZ_JBWCAM000000000
VERSION     NZ_JBWCAM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56484562
            Assembly: GCF_056175065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas sp. JC1203
  ORGANISM  Pseudomonas sp. JC1203
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6880427)
  AUTHORS   Ma,T. and Li,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-MAR-2026) Research Institute of Forest Ecology
            Environment and Protection, Chinese academy of forestry, No. 1
            Dongxiaofu, Haidian District, Beijing 100091, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWCAM000000000.1.
            The Pseudomonas sp. JC1203 whole genome shotgun (WGS) project has
            the project accession NZ_JBWCAM000000000.  This version of the
            project (01) has the accession number NZ_JBWCAM010000000, and
            consists of sequences JBWCAM010000001-JBWCAM010000043.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from China Forestry Culture
            Collection Center.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. V2.04; SPAdes v. 3.15.3;
                                      ABySS v. 2.3.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 120.0x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056175065.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 18:04:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,293
            CDSs (total)                      :: 6,212
            Genes (coding)                    :: 6,132
            CDSs (with protein)               :: 6,132
            Genes (RNA)                       :: 81
            rRNAs                             :: 9, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 66
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 80
            CDSs (without protein)            :: 80
            Pseudo Genes (ambiguous residues) :: 0 of 80
            Pseudo Genes (frameshifted)       :: 10 of 80
            Pseudo Genes (incomplete)         :: 71 of 80
            Pseudo Genes (internal stop)      :: 7 of 80
            Pseudo Genes (multiple problems)  :: 7 of 80
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6880427
                     /organism="Pseudomonas sp. JC1203"
                     /mol_type="genomic DNA"
                     /strain="JC1203"
                     /isolation_source="Rhizosphere"
                     /db_xref="taxon:3695395"
                     /geo_loc_name="China: SICHUAN"
                     /lat_lon="26.38 N 101.63 E"
                     /collection_date="2021-04-05"
WGS         JBWCAM010000001-JBWCAM010000043
WGS_SCAFLD  NZ_JBWCAM010000001-NZ_JBWCAM010000043
//
LOCUS       NZ_QWEF01000000      6301129 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas alloputida strain B2017, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QWEF00000000
VERSION     NZ_QWEF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09789717
            Assembly: GCF_007279645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas alloputida
  ORGANISM  Pseudomonas alloputida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6301129)
  AUTHORS   Oliver,C., Hernandez,I., Caminal,M., Lara,J.M. and Fernandez,C.
  TITLE     Pseudomonas putida strain B2017 produced as technical grade active
            ingredient controls fungal and bacterial crop diseases
  JOURNAL   Biocontrol Sci Technol (2019) In press
  REMARK    Publication Status: Available-Online prior to print
            DOI: 10.1080/09583157.2019.1645304
REFERENCE   2  (bases 1 to 6301129)
  AUTHORS   Hernandez,I. and Fernandez,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-AUG-2018) R&D and RRAA, Futureco Bioscience, Av. del
            Cadi 19-23, Olerdola, Barcelona 08799, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QWEF00000000.1.
            The Pseudomonas alloputida whole genome shotgun (WGS) project has
            the project accession NZ_QWEF00000000.  This version of the project
            (01) has the accession number NZ_QWEF01000000, and consists of
            sequences QWEF01000001-QWEF01000102.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            The organism name was updated to Pseudomonas alloputida in June
            2023.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2016
            Assembly Method        :: RECONSTRUCTOR v. 1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 44.0x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007279645.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:59:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,964
            CDSs (total)                      :: 5,898
            Genes (coding)                    :: 5,755
            CDSs (with protein)               :: 5,755
            Genes (RNA)                       :: 66
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 143
            CDSs (without protein)            :: 143
            Pseudo Genes (ambiguous residues) :: 0 of 143
            Pseudo Genes (frameshifted)       :: 32 of 143
            Pseudo Genes (incomplete)         :: 120 of 143
            Pseudo Genes (internal stop)      :: 19 of 143
            Pseudo Genes (multiple problems)  :: 26 of 143
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6301129
                     /organism="Pseudomonas alloputida"
                     /mol_type="genomic DNA"
                     /strain="B2017"
                     /isolation_source="Root knot nematode egg mass"
                     /host="Meloidogyne sp."
                     /db_xref="taxon:2093743"
                     /geo_loc_name="Spain: Gava"
                     /altitude="10 m"
                     /collection_date="2012"
WGS         QWEF01000001-QWEF01000102
WGS_SCAFLD  NZ_QWEF01000001-NZ_QWEF01000102
//
LOCUS       NZ_JAJSPT010000000   6437550 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas alloputida strain NMI891_07, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAJSPT000000000
VERSION     NZ_JAJSPT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN23773710
            Assembly: GCF_021282605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas alloputida
  ORGANISM  Pseudomonas alloputida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6437550)
  AUTHORS   Urbanowicz,P., Izdebski,R., Biedrzycka,M., Literacka,E. and
            Gniadkowski,M.
  TITLE     Molecular epidemiology of MBL-producing Pseudomonas putida group in
            Poland, 2003-2016
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6437550)
  AUTHORS   Urbanowicz,P., Izdebski,R. and Gniadkowski,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-DEC-2021) Molecular Microbiology, National Medicines
            Institute, Chelmska 30/34, Warsaw 00-725, Poland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAJSPT000000000.1.
            The Pseudomonas alloputida whole genome shotgun (WGS) project has
            the project accession NZ_JAJSPT000000000.  This version of the
            project (01) has the accession number NZ_JAJSPT010000000, and
            consists of sequences JAJSPT010000001-JAJSPT010000152.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 01-FEB-2019
            Assembly Method        :: SPAdes v. 3.10. 0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 40x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_021282605.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:55:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,066
            CDSs (total)                      :: 5,992
            Genes (coding)                    :: 5,830
            CDSs (with protein)               :: 5,830
            Genes (RNA)                       :: 74
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 162
            CDSs (without protein)            :: 162
            Pseudo Genes (ambiguous residues) :: 0 of 162
            Pseudo Genes (frameshifted)       :: 42 of 162
            Pseudo Genes (incomplete)         :: 123 of 162
            Pseudo Genes (internal stop)      :: 16 of 162
            Pseudo Genes (multiple problems)  :: 17 of 162
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6437550
                     /organism="Pseudomonas alloputida"
                     /mol_type="genomic DNA"
                     /strain="NMI891_07"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:2093743"
                     /geo_loc_name="Poland: Koscierzyna"
                     /collection_date="2007-03-10"
                     /collected_by="National Medicines Institute"
                     /genotype="ST69"
WGS         JAJSPT010000001-JAJSPT010000152
WGS_SCAFLD  NZ_JAJSPT010000001-NZ_JAJSPT010000152
//
LOCUS       NZ_JAJSRH010000000   6851844 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas alloputida strain NMI733_14, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAJSRH000000000
VERSION     NZ_JAJSRH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN23773750
            Assembly: GCF_021283195.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas alloputida
  ORGANISM  Pseudomonas alloputida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6851844)
  AUTHORS   Urbanowicz,P., Izdebski,R., Biedrzycka,M., Literacka,E. and
            Gniadkowski,M.
  TITLE     Molecular epidemiology of MBL-producing Pseudomonas putida group in
            Poland, 2003-2016
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6851844)
  AUTHORS   Urbanowicz,P., Izdebski,R. and Gniadkowski,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-DEC-2021) Molecular Microbiology, National Medicines
            Institute, Chelmska 30/34, Warsaw 00-725, Poland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAJSRH000000000.1.
            The Pseudomonas alloputida whole genome shotgun (WGS) project has
            the project accession NZ_JAJSRH000000000.  This version of the
            project (01) has the accession number NZ_JAJSRH010000000, and
            consists of sequences JAJSRH010000001-JAJSRH010000166.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 01-FEB-2019
            Assembly Method        :: SPAdes v. 3.10. 0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 40x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_021283195.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:06:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,526
            CDSs (total)                      :: 6,454
            Genes (coding)                    :: 6,307
            CDSs (with protein)               :: 6,307
            Genes (RNA)                       :: 72
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 147
            CDSs (without protein)            :: 147
            Pseudo Genes (ambiguous residues) :: 0 of 147
            Pseudo Genes (frameshifted)       :: 35 of 147
            Pseudo Genes (incomplete)         :: 124 of 147
            Pseudo Genes (internal stop)      :: 13 of 147
            Pseudo Genes (multiple problems)  :: 22 of 147
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6851844
                     /organism="Pseudomonas alloputida"
                     /mol_type="genomic DNA"
                     /strain="NMI733_14"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:2093743"
                     /geo_loc_name="Poland: Chorzow"
                     /collection_date="2014-02-05"
                     /collected_by="National Medicines Institute"
                     /genotype="ST79"
WGS         JAJSRH010000001-JAJSRH010000166
WGS_SCAFLD  NZ_JAJSRH010000001-NZ_JAJSRH010000166
//
LOCUS       NZ_JBWBZC010000000   5597247 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas sp. CC11G, whole genome shotgun sequencing project.
ACCESSION   NZ_JBWBZC000000000
VERSION     NZ_JBWBZC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56418704
            Assembly: GCF_056174845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas sp. CC11G
  ORGANISM  Pseudomonas sp. CC11G
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 5597247)
  AUTHORS   Haak,D.C.
  TITLE     Emma and Mychala sequence additions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5597247)
  AUTHORS   Haak,D.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-MAR-2026) Biological Sciences, Virginia Tech, 926
            West Campus Drive, Blacksburg, VA 24061, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBZC000000000.1.
            The Pseudomonas sp. CC11G whole genome shotgun (WGS) project has
            the project accession NZ_JBWBZC000000000.  This version of the
            project (01) has the accession number NZ_JBWBZC010000000, and
            consists of sequences JBWBZC010000001-JBWBZC010000043.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date             :: MAY-2021
            Assembly Method           :: Canu v. 1
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: NA
            Genome Coverage           :: 50x
            Sequencing Technology     :: PacBio Sequel
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056174845.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 18:05:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,325
            CDSs (total)                      :: 5,251
            Genes (coding)                    :: 4,614
            CDSs (with protein)               :: 4,614
            Genes (RNA)                       :: 74
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 3, 4 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 57
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 637
            CDSs (without protein)            :: 637
            Pseudo Genes (ambiguous residues) :: 0 of 637
            Pseudo Genes (frameshifted)       :: 527 of 637
            Pseudo Genes (incomplete)         :: 133 of 637
            Pseudo Genes (internal stop)      :: 18 of 637
            Pseudo Genes (multiple problems)  :: 38 of 637
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5597247
                     /organism="Pseudomonas sp. CC11G"
                     /mol_type="genomic DNA"
                     /strain="CC11G"
                     /isolation_source="field"
                     /host="amphibian"
                     /db_xref="taxon:1556792"
                     /geo_loc_name="USA: Virginia,Blacksburg"
                     /lat_lon="37.229572 N 80.413840 W"
                     /collection_date="2012"
WGS         JBWBZC010000001-JBWBZC010000043
WGS_SCAFLD  NZ_JBWBZC010000001-NZ_JBWBZC010000043
//
LOCUS       NZ_JAJSPQ010000000   6452708 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas alloputida strain NMI3088_05, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAJSPQ000000000
VERSION     NZ_JAJSPQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN23773707
            Assembly: GCF_021284645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas alloputida
  ORGANISM  Pseudomonas alloputida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6452708)
  AUTHORS   Urbanowicz,P., Izdebski,R., Biedrzycka,M., Literacka,E. and
            Gniadkowski,M.
  TITLE     Molecular epidemiology of MBL-producing Pseudomonas putida group in
            Poland, 2003-2016
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6452708)
  AUTHORS   Urbanowicz,P., Izdebski,R. and Gniadkowski,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-DEC-2021) Molecular Microbiology, National Medicines
            Institute, Chelmska 30/34, Warsaw 00-725, Poland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAJSPQ000000000.1.
            The Pseudomonas alloputida whole genome shotgun (WGS) project has
            the project accession NZ_JAJSPQ000000000.  This version of the
            project (01) has the accession number NZ_JAJSPQ010000000, and
            consists of sequences JAJSPQ010000001-JAJSPQ010000142.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 01-FEB-2019
            Assembly Method        :: SPAdes v. 3.10. 0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 40x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_021284645.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:03:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,076
            CDSs (total)                      :: 6,006
            Genes (coding)                    :: 5,848
            CDSs (with protein)               :: 5,848
            Genes (RNA)                       :: 70
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 158
            CDSs (without protein)            :: 158
            Pseudo Genes (ambiguous residues) :: 0 of 158
            Pseudo Genes (frameshifted)       :: 41 of 158
            Pseudo Genes (incomplete)         :: 119 of 158
            Pseudo Genes (internal stop)      :: 17 of 158
            Pseudo Genes (multiple problems)  :: 17 of 158
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6452708
                     /organism="Pseudomonas alloputida"
                     /mol_type="genomic DNA"
                     /strain="NMI3088_05"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:2093743"
                     /geo_loc_name="Poland: Poznan"
                     /collection_date="2005-08-17"
                     /collected_by="National Medicines Institute"
                     /genotype="ST69"
WGS         JAJSPQ010000001-JAJSPQ010000142
WGS_SCAFLD  NZ_JAJSPQ010000001-NZ_JAJSPQ010000142
//
LOCUS       NZ_JAJSQT010000000   6330466 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas alloputida strain NMI6396_12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAJSQT000000000
VERSION     NZ_JAJSQT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN23773736
            Assembly: GCF_021282945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas alloputida
  ORGANISM  Pseudomonas alloputida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6330466)
  AUTHORS   Urbanowicz,P., Izdebski,R., Biedrzycka,M., Literacka,E. and
            Gniadkowski,M.
  TITLE     Molecular epidemiology of MBL-producing Pseudomonas putida group in
            Poland, 2003-2016
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6330466)
  AUTHORS   Urbanowicz,P., Izdebski,R. and Gniadkowski,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-DEC-2021) Molecular Microbiology, National Medicines
            Institute, Chelmska 30/34, Warsaw 00-725, Poland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAJSQT000000000.1.
            The Pseudomonas alloputida whole genome shotgun (WGS) project has
            the project accession NZ_JAJSQT000000000.  This version of the
            project (01) has the accession number NZ_JAJSQT010000000, and
            consists of sequences JAJSQT010000001-JAJSQT010000151.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 01-FEB-2019
            Assembly Method        :: SPAdes v. 3.10. 0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 40x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_021282945.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:00:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,955
            CDSs (total)                      :: 5,885
            Genes (coding)                    :: 5,723
            CDSs (with protein)               :: 5,723
            Genes (RNA)                       :: 70
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 61
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 162
            CDSs (without protein)            :: 162
            Pseudo Genes (ambiguous residues) :: 0 of 162
            Pseudo Genes (frameshifted)       :: 33 of 162
            Pseudo Genes (incomplete)         :: 131 of 162
            Pseudo Genes (internal stop)      :: 21 of 162
            Pseudo Genes (multiple problems)  :: 21 of 162
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6330466
                     /organism="Pseudomonas alloputida"
                     /mol_type="genomic DNA"
                     /strain="NMI6396_12"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:2093743"
                     /geo_loc_name="Poland: Opole"
                     /collection_date="2012-10-20"
                     /collected_by="National Medicines Institute"
                     /genotype="ST78"
WGS         JAJSQT010000001-JAJSQT010000151
WGS_SCAFLD  NZ_JAJSQT010000001-NZ_JAJSQT010000151
//
LOCUS       NZ_JAJSRE010000000   6426528 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas alloputida strain NMI5033_13, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAJSRE000000000
VERSION     NZ_JAJSRE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN23773747
            Assembly: GCF_021282425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas alloputida
  ORGANISM  Pseudomonas alloputida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6426528)
  AUTHORS   Urbanowicz,P., Izdebski,R., Biedrzycka,M., Literacka,E. and
            Gniadkowski,M.
  TITLE     Molecular epidemiology of MBL-producing Pseudomonas putida group in
            Poland, 2003-2016
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6426528)
  AUTHORS   Urbanowicz,P., Izdebski,R. and Gniadkowski,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-DEC-2021) Molecular Microbiology, National Medicines
            Institute, Chelmska 30/34, Warsaw 00-725, Poland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAJSRE000000000.1.
            The Pseudomonas alloputida whole genome shotgun (WGS) project has
            the project accession NZ_JAJSRE000000000.  This version of the
            project (01) has the accession number NZ_JAJSRE010000000, and
            consists of sequences JAJSRE010000001-JAJSRE010000157.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 01-FEB-2019
            Assembly Method        :: SPAdes v. 3.10. 0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 40x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_021282425.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:48:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,063
            CDSs (total)                      :: 5,996
            Genes (coding)                    :: 5,839
            CDSs (with protein)               :: 5,839
            Genes (RNA)                       :: 67
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 157
            CDSs (without protein)            :: 157
            Pseudo Genes (ambiguous residues) :: 0 of 157
            Pseudo Genes (frameshifted)       :: 42 of 157
            Pseudo Genes (incomplete)         :: 117 of 157
            Pseudo Genes (internal stop)      :: 17 of 157
            Pseudo Genes (multiple problems)  :: 17 of 157
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6426528
                     /organism="Pseudomonas alloputida"
                     /mol_type="genomic DNA"
                     /strain="NMI5033_13"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:2093743"
                     /geo_loc_name="Poland: Warszawa"
                     /collection_date="2013-10-31"
                     /collected_by="National Medicines Institute"
                     /genotype="ST69"
WGS         JAJSRE010000001-JAJSRE010000157
WGS_SCAFLD  NZ_JAJSRE010000001-NZ_JAJSRE010000157
//
LOCUS       NZ_JBGFFG010000000   3689593 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudoxanthomonas sp. LjRoot204_2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBGFFG000000000
VERSION     NZ_JBGFFG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN42959550
            Assembly: GCF_056175765.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudoxanthomonas sp. LjRoot204_2
  ORGANISM  Pseudoxanthomonas sp. LjRoot204_2
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Pseudoxanthomonas.
REFERENCE   1  (bases 1 to 3689593)
  AUTHORS   Selten,G., Lamouche,F., Gomez Repolles,A., Tao,K., Blahovska,Z. and
            Radutoiu,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-AUG-2024) Plant-Microbe Interactions, Utrecht
            University, Padualaan 8, Utrecht, Utrecht 3584 CH, Netherlands
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBGFFG000000000.1.
            The Pseudoxanthomonas sp. LjRoot204_2 whole genome shotgun (WGS)
            project has the project accession NZ_JBGFFG000000000.  This version
            of the project (01) has the accession number NZ_JBGFFG010000000,
            and consists of sequences JBGFFG010000001-JBGFFG010000749.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: A5 v. A5-miseq version 20160825
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 13x
            Sequencing Technology  :: Illumina NovaSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056175765.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:38:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,918
            CDSs (total)                      :: 3,873
            Genes (coding)                    :: 3,681
            CDSs (with protein)               :: 3,681
            Genes (RNA)                       :: 45
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 192
            CDSs (without protein)            :: 192
            Pseudo Genes (ambiguous residues) :: 0 of 192
            Pseudo Genes (frameshifted)       :: 10 of 192
            Pseudo Genes (incomplete)         :: 182 of 192
            Pseudo Genes (internal stop)      :: 4 of 192
            Pseudo Genes (multiple problems)  :: 4 of 192
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3689593
                     /organism="Pseudoxanthomonas sp. LjRoot204_2"
                     /mol_type="genomic DNA"
                     /strain="LjRoot204_2"
                     /isolation_source="root"
                     /host="Lotus japonicus Gifu"
                     /db_xref="taxon:3240875"
                     /geo_loc_name="Germany: Cologne"
                     /collection_date="2017"
                     /identified_by="Gijs Selten and Adrian Gomez Repolles"
WGS         JBGFFG010000001-JBGFFG010000749
WGS_SCAFLD  NZ_JBGFFG010000001-NZ_JBGFFG010000749
//
LOCUS       NZ_JBPKAL010000000   6221267 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas alloputida strain SMN1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBPKAL000000000
VERSION     NZ_JBPKAL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN49529367
            Assembly: GCF_051216655.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas alloputida
  ORGANISM  Pseudomonas alloputida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6221267)
  AUTHORS   Ketehouli,T., Trub,M.R., Goss,E. and Martins,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-JUN-2025) Plant Pathology, University of Florida,
            2550 Hull Road, Gainesville, FL 32611, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPKAL000000000.1.
            The Pseudomonas alloputida whole genome shotgun (WGS) project has
            the project accession NZ_JBPKAL000000000.  This version of the
            project (01) has the accession number NZ_JBPKAL010000000, and
            consists of sequences JBPKAL010000001-JBPKAL010000184.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from PI: Samuel Martins,
            Department of Plant Pathology, University of Florida, Gainesville,
            Florida.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 06-OCT-2024
            Assembly Method        :: SPAdes v. October-2024
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 81.5x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051216655.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:09:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,692
            CDSs (total)                      :: 5,631
            Genes (coding)                    :: 5,524
            CDSs (with protein)               :: 5,524
            Genes (RNA)                       :: 61
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 107
            CDSs (without protein)            :: 107
            Pseudo Genes (ambiguous residues) :: 0 of 107
            Pseudo Genes (frameshifted)       :: 25 of 107
            Pseudo Genes (incomplete)         :: 85 of 107
            Pseudo Genes (internal stop)      :: 11 of 107
            Pseudo Genes (multiple problems)  :: 11 of 107
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6221267
                     /organism="Pseudomonas alloputida"
                     /mol_type="genomic DNA"
                     /strain="SMN1"
                     /host="Citrus reticulata"
                     /db_xref="taxon:2093743"
                     /geo_loc_name="USA: Clermont, Florida"
                     /collection_date="2024-05-02"
WGS         JBPKAL010000001-JBPKAL010000184
WGS_SCAFLD  NZ_JBPKAL010000001-NZ_JBPKAL010000184
//
LOCUS       NZ_QUZU01000000      6702324 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas kairouanensis strain KC12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QUZU00000000
VERSION     NZ_QUZU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09781217
            Assembly: GCF_004682055.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas kairouanensis
  ORGANISM  Pseudomonas kairouanensis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6702324)
  AUTHORS   Oueslati,M., Mulet,M., Gomila,M., Berge,O., Hajlaoui,M.R.,
            Lalucat,J., Sadfi-Zouaoui,N. and Garcia-Valdes,E.
  TITLE     New species of pathogenic Pseudomonas isolated from citrus in
            Tunisia: Proposal of Pseudomonas kairouanensis sp. nov. and
            Pseudomonas nabeulensis sp. nov
  JOURNAL   Syst Appl Microbiol 42 (3), 348-359 (2019)
   PUBMED   30910423
REFERENCE   2  (bases 1 to 6702324)
  AUTHORS   Maroua,O., Mulet,M., Gomila,M., Berge,O., Lalucat,J.,
            Sadfi-Zouaoi,N. and Garcia-Valdes,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-AUG-2018) Microbiologia, Biologia, University of
            Balearic Islands, Ctra. Valldemossa, km. 7.5, Palma de Mallorca,
            Balearic Islands 07122, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QUZU00000000.1.
            The Pseudomonas kairouanensis whole genome shotgun (WGS) project
            has the project accession NZ_QUZU00000000.  This version of the
            project (01) has the accession number NZ_QUZU01000000, and consists
            of sequences QUZU01000001-QUZU01000107.
            Bacteria and source DNA available from University of the Balearic
            Islands.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 26-JUL-2018
            Assembly Method        :: Newbler v. 2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 130.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004682055.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:25:23
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,212
            CDSs (total)                      :: 6,144
            Genes (coding)                    :: 6,058
            CDSs (with protein)               :: 6,058
            Genes (RNA)                       :: 68
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 86
            CDSs (without protein)            :: 86
            Pseudo Genes (ambiguous residues) :: 0 of 86
            Pseudo Genes (frameshifted)       :: 13 of 86
            Pseudo Genes (incomplete)         :: 76 of 86
            Pseudo Genes (internal stop)      :: 7 of 86
            Pseudo Genes (multiple problems)  :: 10 of 86
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6702324
                     /organism="Pseudomonas kairouanensis"
                     /mol_type="genomic DNA"
                     /strain="KC12"
                     /isolation_source="citrus"
                     /type_material="type strain of Pseudomonas kairouanensis"
                     /db_xref="taxon:2293832"
                     /geo_loc_name="Tunisia: Kairouan, Sbikha"
                     /collection_date="2017"
WGS         QUZU01000001-QUZU01000107
WGS_SCAFLD  NZ_QUZU01000001-NZ_QUZU01000107
//
LOCUS       NZ_VFEP01000000      6374365 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas fluorescens strain DSM 50090, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VFEP00000000
VERSION     NZ_VFEP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12027180
            Assembly: GCF_007858165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas fluorescens
  ORGANISM  Pseudomonas fluorescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6374365)
  AUTHORS   Hofmann,K., Huptas,C., Doll,E., Scherer,S. and Wenning,M.
  TITLE     Pseudomonas bimorpha sp. nov. isolated from bovine raw milk and
            skim milk concentrate
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6374365)
  AUTHORS   Huptas,C., Von Neubeck,M., Hofmann,K., Wenning,M. and Scherer,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUN-2019) Chair of Microbial Ecology, ZIEL Institute
            for Food an Health, Technische Universitaet Muenchen,
            Weihenstephaner Berg 3, Freising, Bayern 85354, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VFEP00000000.1.
            The Pseudomonas fluorescens whole genome shotgun (WGS) project has
            the project accession NZ_VFEP00000000.  This version of the project
            (01) has the accession number NZ_VFEP01000000, and consists of
            sequences VFEP01000001-VFEP01000031.
            Bacteria and source DNA available from DSMZ.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2014
            Assembly Method        :: SPAdes v. 2.5.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007858165.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:38:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,885
            CDSs (total)                      :: 5,813
            Genes (coding)                    :: 5,725
            CDSs (with protein)               :: 5,725
            Genes (RNA)                       :: 72
            rRNAs                             :: 6, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 1 (5S, 16S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 88
            CDSs (without protein)            :: 88
            Pseudo Genes (ambiguous residues) :: 0 of 88
            Pseudo Genes (frameshifted)       :: 16 of 88
            Pseudo Genes (incomplete)         :: 76 of 88
            Pseudo Genes (internal stop)      :: 7 of 88
            Pseudo Genes (multiple problems)  :: 10 of 88
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6374365
                     /organism="Pseudomonas fluorescens"
                     /mol_type="genomic DNA"
                     /strain="DSM 50090"
                     /isolation_source="pre-filter tanks"
                     /culture_collection="ATCC:13525"
                     /culture_collection="DSM:50090"
                     /type_material="type strain of Pseudomonas fluorescens"
                     /db_xref="taxon:294"
                     /geo_loc_name="United Kingdom"
WGS         VFEP01000001-VFEP01000031
WGS_SCAFLD  NZ_VFEP01000001-NZ_VFEP01000031
//
LOCUS       NZ_JABWQE010000000   6249690 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas lurida strain PGSB 8273, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JABWQE000000000
VERSION     NZ_JABWQE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN15248359
            Assembly: GCF_014268265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas lurida
  ORGANISM  Pseudomonas lurida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6249690)
  AUTHORS   Girard,L., Lood,C., Rokni-Zadeh,H., van Noort,V., Lavigne,R. and De
            Mot,R.
  TITLE     Reliable Identification of Environmental Pseudomonas Isolates Using
            the rpoD Gene
  JOURNAL   Microorganisms 8 (8), 1166 (2020)
   PUBMED   32752051
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6249690)
  AUTHORS   Lood,C. and Girard,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-JUL-2020) Division Animal and Human Health
            Engineering, KU Leuven, Kasteelpark Arenberg 21, Leuven 3001,
            Belgium
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JABWQE000000000.1.
            The Pseudomonas lurida whole genome shotgun (WGS) project has the
            project accession NZ_JABWQE000000000.  This version of the project
            (01) has the accession number NZ_JABWQE010000000, and consists of
            sequences JABWQE010000001-JABWQE010000061.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.13.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 40x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_014268265.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:01:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,820
            CDSs (total)                      :: 5,745
            Genes (coding)                    :: 5,655
            CDSs (with protein)               :: 5,655
            Genes (RNA)                       :: 75
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 4 (5S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 90
            CDSs (without protein)            :: 90
            Pseudo Genes (ambiguous residues) :: 0 of 90
            Pseudo Genes (frameshifted)       :: 27 of 90
            Pseudo Genes (incomplete)         :: 75 of 90
            Pseudo Genes (internal stop)      :: 17 of 90
            Pseudo Genes (multiple problems)  :: 23 of 90
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6249690
                     /organism="Pseudomonas lurida"
                     /mol_type="genomic DNA"
                     /strain="PGSB 8273"
                     /isolation_source="Maize rhizosphere"
                     /db_xref="taxon:244566"
                     /geo_loc_name="Belgium"
                     /collection_date="1994"
WGS         JABWQE010000001-JABWQE010000061
WGS_SCAFLD  NZ_JABWQE010000001-NZ_JABWQE010000061
//
LOCUS       NZ_JAJSRF020000000   6844061 bp    DNA     linear   BCT 26-MAR-2026
DEFINITION  Pseudomonas alloputida strain NMI5768_13, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAJSRF000000000
VERSION     NZ_JAJSRF000000000.2
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN23773748
            Assembly: GCF_021282465.2
KEYWORDS    WGS; RefSeq.
SOURCE      Pseudomonas alloputida
  ORGANISM  Pseudomonas alloputida
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pseudomonadales; Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6844061)
  AUTHORS   Urbanowicz,P., Izdebski,R., Biedrzycka,M. and Gniadkowski,M.
  TITLE     MBL-encoding genomic islands in Pseudomonas spp. in Poland
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6844061)
  AUTHORS   Urbanowicz,P. and Izdebski,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-JUN-2023) Molecular Microbiology, National Medicines
            Institute, Chelmska 30/34, Warsaw 00-725, Poland
REFERENCE   3  (bases 1 to 6844061)
  AUTHORS   Urbanowicz,P., Izdebski,R. and Gniadkowski,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-DEC-2021) Molecular Microbiology, National Medicines
            Institute, Chelmska 30/34, Warsaw 00-725, Poland
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAJSRF000000000.2.
            
            On Jun 28, 2023 this sequence version replaced
            NZ_JAJSRF000000000.1.
            The Pseudomonas alloputida whole genome shotgun (WGS) project has
            the project accession NZ_JAJSRF000000000.  This version of the
            project (02) has the accession number NZ_JAJSRF020000000, and
            consists of sequences JAJSRF020000001-JAJSRF020000005.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 29-JAN-2020
            Assembly Method        :: Unicycler v. 0.4.8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Illumina HiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_021282465.2-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:17:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,494
            CDSs (total)                      :: 6,392
            Genes (coding)                    :: 6,226
            CDSs (with protein)               :: 6,226
            Genes (RNA)                       :: 102
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 41 of 166
            Pseudo Genes (incomplete)         :: 123 of 166
            Pseudo Genes (internal stop)      :: 24 of 166
            Pseudo Genes (multiple problems)  :: 20 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6844061
                     /organism="Pseudomonas alloputida"
                     /mol_type="genomic DNA"
                     /strain="NMI5768_13"
                     /isolation_source="urine"
                     /host="Homo sapiens"
                     /db_xref="taxon:2093743"
                     /geo_loc_name="Poland: Warszawa"
                     /collection_date="2013-12-11"
                     /collected_by="National Medicines Institute"
                     /genotype="ST69"
WGS         JAJSRF020000001-JAJSRF020000005
WGS_SCAFLD  NZ_JAJSRF020000001-NZ_JAJSRF020000005
//
LOCUS       NZ_JBCPUH010000000   2791208 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain 65, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPUH000000000
VERSION     NZ_JBCPUH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065854
            Assembly: GCF_045910235.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2791208)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2791208)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPUH000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPUH000000000.  This version of the
            project (01) has the accession number NZ_JBCPUH010000000, and
            consists of sequences JBCPUH010000001-JBCPUH010000135.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045910235.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:56:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,800
            CDSs (total)                      :: 2,736
            Genes (coding)                    :: 2,629
            CDSs (with protein)               :: 2,629
            Genes (RNA)                       :: 64
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (5S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 107
            CDSs (without protein)            :: 107
            Pseudo Genes (ambiguous residues) :: 0 of 107
            Pseudo Genes (frameshifted)       :: 56 of 107
            Pseudo Genes (incomplete)         :: 54 of 107
            Pseudo Genes (internal stop)      :: 22 of 107
            Pseudo Genes (multiple problems)  :: 20 of 107
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2791208
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="65"
                     /isolation_source="Raw milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Henan"
                     /collection_date="2020-06"
                     /collected_by="Zekun Li"
WGS         JBCPUH010000001-JBCPUH010000135
WGS_SCAFLD  NZ_JBCPUH010000001-NZ_JBCPUH010000135
//
LOCUS       NZ_JBCPTL010000000   2733226 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain CA2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPTL000000000
VERSION     NZ_JBCPTL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065876
            Assembly: GCF_045909775.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2733226)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2733226)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPTL000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPTL000000000.  This version of the
            project (01) has the accession number NZ_JBCPTL010000000, and
            consists of sequences JBCPTL010000001-JBCPTL010000056.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045909775.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:47:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,711
            CDSs (total)                      :: 2,649
            Genes (coding)                    :: 2,574
            CDSs (with protein)               :: 2,574
            Genes (RNA)                       :: 62
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2 (5S, 16S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 47 of 75
            Pseudo Genes (incomplete)         :: 28 of 75
            Pseudo Genes (internal stop)      :: 16 of 75
            Pseudo Genes (multiple problems)  :: 15 of 75
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2733226
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="CA2"
                     /isolation_source="Raw milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Inner Mongolia autonomous region"
                     /collection_date="2020-08"
                     /collected_by="Zekun Li"
WGS         JBCPTL010000001-JBCPTL010000056
WGS_SCAFLD  NZ_JBCPTL010000001-NZ_JBCPTL010000056
//
LOCUS       NZ_JBCPUF010000000   2760307 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain 70, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPUF000000000
VERSION     NZ_JBCPUF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065856
            Assembly: GCF_045910175.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2760307)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2760307)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPUF000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPUF000000000.  This version of the
            project (01) has the accession number NZ_JBCPUF010000000, and
            consists of sequences JBCPUF010000001-JBCPUF010000082.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045910175.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 14:18:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,790
            CDSs (total)                      :: 2,729
            Genes (coding)                    :: 2,645
            CDSs (with protein)               :: 2,645
            Genes (RNA)                       :: 61
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 84
            CDSs (without protein)            :: 84
            Pseudo Genes (ambiguous residues) :: 0 of 84
            Pseudo Genes (frameshifted)       :: 45 of 84
            Pseudo Genes (incomplete)         :: 40 of 84
            Pseudo Genes (internal stop)      :: 19 of 84
            Pseudo Genes (multiple problems)  :: 15 of 84
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2760307
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="70"
                     /isolation_source="Raw milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Henan"
                     /collection_date="2020-06"
                     /collected_by="Zekun Li"
WGS         JBCPUF010000001-JBCPUF010000082
WGS_SCAFLD  NZ_JBCPUF010000001-NZ_JBCPUF010000082
//
LOCUS       NZ_JBCPUW010000000   2809661 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain 46, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPUW000000000
VERSION     NZ_JBCPUW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065839
            Assembly: GCF_045910495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2809661)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2809661)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPUW000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPUW000000000.  This version of the
            project (01) has the accession number NZ_JBCPUW010000000, and
            consists of sequences JBCPUW010000001-JBCPUW010000098.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045910495.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 14:09:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,834
            CDSs (total)                      :: 2,769
            Genes (coding)                    :: 2,678
            CDSs (with protein)               :: 2,678
            Genes (RNA)                       :: 65
            rRNAs                             :: 2, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 4, 2 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 91
            CDSs (without protein)            :: 91
            Pseudo Genes (ambiguous residues) :: 0 of 91
            Pseudo Genes (frameshifted)       :: 47 of 91
            Pseudo Genes (incomplete)         :: 43 of 91
            Pseudo Genes (internal stop)      :: 21 of 91
            Pseudo Genes (multiple problems)  :: 15 of 91
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2809661
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="46"
                     /isolation_source="Raw milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Henan"
                     /collection_date="2020-06"
                     /collected_by="Zekun Li"
WGS         JBCPUW010000001-JBCPUW010000098
WGS_SCAFLD  NZ_JBCPUW010000001-NZ_JBCPUW010000098
//
LOCUS       NZ_JAOWTN010000000   2708827 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain BSI_362.01, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAOWTN000000000
VERSION     NZ_JAOWTN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN31230874
            Assembly: GCF_030337265.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2708827)
  AUTHORS   Schwartz,D.J., Shalon,N., Wardenburg,K., DeVeaux,A., Wallace,M.A.,
            Hall-Moore,C., Ndao,I.M., Sullivan,J.E., Radmacher,P., Escobedo,M.,
            Burnham,C.D., Warner,B.B., Tarr,P.I. and Dantas,G.
  TITLE     Gut pathogen colonization precedes bloodstream infection in the
            neonatal intensive care unit
  JOURNAL   Sci Transl Med 15 (694), eadg5562 (2023)
   PUBMED   37134153
  REMARK    Erratum:[Sci Transl Med. 2024 May;16(745):eadp7701. doi:
            10.1126/scitranslmed.adp7701. PMID: 38691623]
REFERENCE   2  (bases 1 to 2708827)
  AUTHORS   Schwartz,D.J., Shalon,N., Wardenburg,K., Deveaux,A., Paruthiyil,S.,
            Wallace,M., Hall-Moore,C., Burnham,C.-A.D., Warner,B., Tarr,P.I.
            and Dantas,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2022) Department of Pediatrics, Washington
            University in St. Louis, 660 S. Euclid Ave, Saint Louis, MO 63110,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAOWTN000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JAOWTN000000000.  This version of the
            project (01) has the accession number NZ_JAOWTN010000000, and
            consists of sequences JAOWTN010000001-JAOWTN010000013.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: SEP-2020
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_030337265.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:32:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,686
            CDSs (total)                      :: 2,619
            Genes (coding)                    :: 2,539
            CDSs (with protein)               :: 2,539
            Genes (RNA)                       :: 67
            rRNAs                             :: 4, 4, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 4, 1 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 80
            CDSs (without protein)            :: 80
            Pseudo Genes (ambiguous residues) :: 0 of 80
            Pseudo Genes (frameshifted)       :: 47 of 80
            Pseudo Genes (incomplete)         :: 31 of 80
            Pseudo Genes (internal stop)      :: 12 of 80
            Pseudo Genes (multiple problems)  :: 9 of 80
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2708827
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="BSI_362.01"
                     /isolation_source="blood from hospitalized preterm
                     neonate"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="USA"
                     /lat_lon="38.6270 N 90.1994 W"
                     /collection_date="2009-09/2013-08"
                     /collected_by="Washington University School of Medicine
                     Clinical Microbiology Laboratory"
WGS         JAOWTN010000001-JAOWTN010000013
WGS_SCAFLD  NZ_JAOWTN010000001-NZ_JAOWTN010000013
//
LOCUS       NZ_WIRO01000000      6836834 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium meliloti strain KH12g, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WIRO00000000
VERSION     NZ_WIRO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766401
            Assembly: GCF_009599625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium meliloti (Rhizobium meliloti)
  ORGANISM  Sinorhizobium meliloti
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 6836834)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6836834)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WIRO00000000.1.
            The Sinorhizobium meliloti whole genome shotgun (WGS) project has
            the project accession NZ_WIRO00000000.  This version of the project
            (01) has the accession number NZ_WIRO01000000, and consists of
            sequences WIRO01000001-WIRO01000166.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009599625.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:46:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,532
            CDSs (total)                      :: 6,459
            Genes (coding)                    :: 6,258
            CDSs (with protein)               :: 6,258
            Genes (RNA)                       :: 73
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 201
            CDSs (without protein)            :: 201
            Pseudo Genes (ambiguous residues) :: 0 of 201
            Pseudo Genes (frameshifted)       :: 110 of 201
            Pseudo Genes (incomplete)         :: 122 of 201
            Pseudo Genes (internal stop)      :: 28 of 201
            Pseudo Genes (multiple problems)  :: 53 of 201
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6836834
                     /organism="Sinorhizobium meliloti"
                     /mol_type="genomic DNA"
                     /strain="KH12g"
                     /isolation_source="plant root nodules"
                     /host="Medicago truncatula"
                     /db_xref="taxon:382"
                     /geo_loc_name="France"
WGS         WIRO01000001-WIRO01000166
WGS_SCAFLD  NZ_WIRO01000001-NZ_WIRO01000166
//
LOCUS       NZ_JBJMXX010000000   4647189 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Infantis strain
            YZU1485, whole genome shotgun sequencing project.
ACCESSION   NZ_JBJMXX000000000
VERSION     NZ_JBJMXX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45124527
            Assembly: GCF_045808985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Infantis
  ORGANISM  Salmonella enterica subsp. enterica serovar Infantis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4647189)
  AUTHORS   Mang,C.
  TITLE     Salmonella enterica subsp. enterica serovar Infantis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4647189)
  AUTHORS   Mang,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2024) Jiangsu Key Laboratory of Zoonosis,
            Yangzhou University, 48 East Wenhui Road, Yangzhou, Jiangsu 225009,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJMXX000000000.1.
            The Salmonella enterica subsp. enterica serovar Infantis whole
            genome shotgun (WGS) project has the project accession
            NZ_JBJMXX000000000.  This version of the project (01) has the
            accession number NZ_JBJMXX010000000, and consists of sequences
            JBJMXX010000001-JBJMXX010000057.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 20-DEC-2021
            Assembly Method        :: SPAdes v. SPAdes 3.15
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045808985.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 14:00:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,555
            CDSs (total)                      :: 4,450
            Genes (coding)                    :: 4,333
            CDSs (with protein)               :: 4,333
            Genes (RNA)                       :: 105
            rRNAs                             :: 4, 4, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 4, 3, 6 (5S, 16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 16
            Pseudo Genes (total)              :: 117
            CDSs (without protein)            :: 117
            Pseudo Genes (ambiguous residues) :: 0 of 117
            Pseudo Genes (frameshifted)       :: 48 of 117
            Pseudo Genes (incomplete)         :: 86 of 117
            Pseudo Genes (internal stop)      :: 17 of 117
            Pseudo Genes (multiple problems)  :: 32 of 117
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4647189
                     /organism="Salmonella enterica subsp. enterica serovar
                     Infantis"
                     /mol_type="genomic DNA"
                     /strain="YZU1485"
                     /serovar="Infantis"
                     /isolation_source="egg carton"
                     /sub_species="enterica"
                     /db_xref="taxon:595"
                     /geo_loc_name="China: Nan Tong"
                     /collection_date="2019-09-26"
                     /collected_by="Meng Chuang"
WGS         JBJMXX010000001-JBJMXX010000057
WGS_SCAFLD  NZ_JBJMXX010000001-NZ_JBJMXX010000057
//
LOCUS       NZ_JBJMXV010000000   4647541 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Infantis strain
            YZU1483, whole genome shotgun sequencing project.
ACCESSION   NZ_JBJMXV000000000
VERSION     NZ_JBJMXV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45124525
            Assembly: GCF_045809065.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Infantis
  ORGANISM  Salmonella enterica subsp. enterica serovar Infantis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4647541)
  AUTHORS   Mang,C.
  TITLE     Salmonella enterica subsp. enterica serovar Infantis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4647541)
  AUTHORS   Mang,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2024) Jiangsu Key Laboratory of Zoonosis,
            Yangzhou University, 48 East Wenhui Road, Yangzhou, Jiangsu 225009,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJMXV000000000.1.
            The Salmonella enterica subsp. enterica serovar Infantis whole
            genome shotgun (WGS) project has the project accession
            NZ_JBJMXV000000000.  This version of the project (01) has the
            accession number NZ_JBJMXV010000000, and consists of sequences
            JBJMXV010000001-JBJMXV010000059.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 20-DEC-2021
            Assembly Method        :: SPAdes v. SPAdes 3.15
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045809065.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:57:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,556
            CDSs (total)                      :: 4,453
            Genes (coding)                    :: 4,334
            CDSs (with protein)               :: 4,334
            Genes (RNA)                       :: 103
            rRNAs                             :: 4, 3, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 4, 2, 6 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 17
            Pseudo Genes (total)              :: 119
            CDSs (without protein)            :: 119
            Pseudo Genes (ambiguous residues) :: 0 of 119
            Pseudo Genes (frameshifted)       :: 48 of 119
            Pseudo Genes (incomplete)         :: 88 of 119
            Pseudo Genes (internal stop)      :: 17 of 119
            Pseudo Genes (multiple problems)  :: 32 of 119
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4647541
                     /organism="Salmonella enterica subsp. enterica serovar
                     Infantis"
                     /mol_type="genomic DNA"
                     /strain="YZU1483"
                     /serovar="Infantis"
                     /isolation_source="equipment"
                     /sub_species="enterica"
                     /db_xref="taxon:595"
                     /geo_loc_name="China: Nan Tong"
                     /collection_date="2019-09-26"
                     /collected_by="Meng Chuang"
WGS         JBJMXV010000001-JBJMXV010000059
WGS_SCAFLD  NZ_JBJMXV010000001-NZ_JBJMXV010000059
//
LOCUS       NZ_JBCPSX010000000   2756318 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain EB7, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPSX000000000
VERSION     NZ_JBCPSX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065890
            Assembly: GCF_045909515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2756318)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2756318)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPSX000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPSX000000000.  This version of the
            project (01) has the accession number NZ_JBCPSX010000000, and
            consists of sequences JBCPSX010000001-JBCPSX010000165.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045909515.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:52:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,733
            CDSs (total)                      :: 2,677
            Genes (coding)                    :: 2,562
            CDSs (with protein)               :: 2,562
            Genes (RNA)                       :: 56
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 115
            CDSs (without protein)            :: 115
            Pseudo Genes (ambiguous residues) :: 0 of 115
            Pseudo Genes (frameshifted)       :: 58 of 115
            Pseudo Genes (incomplete)         :: 48 of 115
            Pseudo Genes (internal stop)      :: 23 of 115
            Pseudo Genes (multiple problems)  :: 11 of 115
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2756318
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="EB7"
                     /isolation_source="Mastitis milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Inner Mongolia autonomous region"
                     /collection_date="2020-08"
                     /collected_by="Zekun Li"
WGS         JBCPSX010000001-JBCPSX010000165
WGS_SCAFLD  NZ_JBCPSX010000001-NZ_JBCPSX010000165
//
LOCUS       NZ_JBCPTD010000000   2739749 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain EA6, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPTD000000000
VERSION     NZ_JBCPTD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065884
            Assembly: GCF_045909635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2739749)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2739749)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPTD000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPTD000000000.  This version of the
            project (01) has the accession number NZ_JBCPTD010000000, and
            consists of sequences JBCPTD010000001-JBCPTD010000137.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045909635.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:48:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,713
            CDSs (total)                      :: 2,658
            Genes (coding)                    :: 2,543
            CDSs (with protein)               :: 2,543
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 115
            CDSs (without protein)            :: 115
            Pseudo Genes (ambiguous residues) :: 1 of 115
            Pseudo Genes (frameshifted)       :: 57 of 115
            Pseudo Genes (incomplete)         :: 48 of 115
            Pseudo Genes (internal stop)      :: 22 of 115
            Pseudo Genes (multiple problems)  :: 10 of 115
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2739749
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="EA6"
                     /isolation_source="Raw milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Inner Mongolia autonomous region"
                     /collection_date="2020-08"
                     /collected_by="Zekun Li"
WGS         JBCPTD010000001-JBCPTD010000137
WGS_SCAFLD  NZ_JBCPTD010000001-NZ_JBCPTD010000137
//
LOCUS       NZ_JBCPTW010000000   2856307 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain 82-1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPTW000000000
VERSION     NZ_JBCPTW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065865
            Assembly: GCF_045910035.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2856307)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2856307)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPTW000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPTW000000000.  This version of the
            project (01) has the accession number NZ_JBCPTW010000000, and
            consists of sequences JBCPTW010000001-JBCPTW010000114.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045910035.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:54:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,913
            CDSs (total)                      :: 2,854
            Genes (coding)                    :: 2,736
            CDSs (with protein)               :: 2,736
            Genes (RNA)                       :: 59
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 46 of 118
            Pseudo Genes (incomplete)         :: 61 of 118
            Pseudo Genes (internal stop)      :: 25 of 118
            Pseudo Genes (multiple problems)  :: 14 of 118
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2856307
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="82-1"
                     /isolation_source="Raw milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Henan"
                     /collection_date="2020-06"
                     /collected_by="Zekun Li"
WGS         JBCPTW010000001-JBCPTW010000114
WGS_SCAFLD  NZ_JBCPTW010000001-NZ_JBCPTW010000114
//
LOCUS       NZ_WISP01000000      7166571 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium meliloti strain M30, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WISP00000000
VERSION     NZ_WISP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766428
            Assembly: GCF_009599735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium meliloti (Rhizobium meliloti)
  ORGANISM  Sinorhizobium meliloti
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 7166571)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7166571)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WISP00000000.1.
            The Sinorhizobium meliloti whole genome shotgun (WGS) project has
            the project accession NZ_WISP00000000.  This version of the project
            (01) has the accession number NZ_WISP01000000, and consists of
            sequences WISP01000001-WISP01000227.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009599735.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:53:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,990
            CDSs (total)                      :: 6,916
            Genes (coding)                    :: 6,528
            CDSs (with protein)               :: 6,528
            Genes (RNA)                       :: 74
            rRNAs                             :: 4, 5, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 5, 4 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 388
            CDSs (without protein)            :: 388
            Pseudo Genes (ambiguous residues) :: 1 of 388
            Pseudo Genes (frameshifted)       :: 216 of 388
            Pseudo Genes (incomplete)         :: 250 of 388
            Pseudo Genes (internal stop)      :: 35 of 388
            Pseudo Genes (multiple problems)  :: 102 of 388
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7166571
                     /organism="Sinorhizobium meliloti"
                     /mol_type="genomic DNA"
                     /strain="M30"
                     /isolation_source="plant root nodules"
                     /host="Medicago polymorpha"
                     /db_xref="taxon:382"
                     /geo_loc_name="Syria"
WGS         WISP01000001-WISP01000227
WGS_SCAFLD  NZ_WISP01000001-NZ_WISP01000227
//
LOCUS       NZ_WISD01000000      7147571 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium medicae strain M102, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WISD00000000
VERSION     NZ_WISD00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766416
            Assembly: GCF_009601495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium medicae (Ensifer medicae)
  ORGANISM  Sinorhizobium medicae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 7147571)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7147571)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WISD00000000.1.
            The Sinorhizobium medicae whole genome shotgun (WGS) project has
            the project accession NZ_WISD00000000.  This version of the project
            (01) has the accession number NZ_WISD01000000, and consists of
            sequences WISD01000001-WISD01000242.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009601495.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:40:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,094
            CDSs (total)                      :: 7,006
            Genes (coding)                    :: 6,551
            CDSs (with protein)               :: 6,551
            Genes (RNA)                       :: 88
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 455
            CDSs (without protein)            :: 455
            Pseudo Genes (ambiguous residues) :: 0 of 455
            Pseudo Genes (frameshifted)       :: 255 of 455
            Pseudo Genes (incomplete)         :: 278 of 455
            Pseudo Genes (internal stop)      :: 47 of 455
            Pseudo Genes (multiple problems)  :: 110 of 455
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7147571
                     /organism="Sinorhizobium medicae"
                     /mol_type="genomic DNA"
                     /strain="M102"
                     /isolation_source="plant root nodules"
                     /host="Medicago truncatula"
                     /db_xref="taxon:110321"
                     /geo_loc_name="Syria"
WGS         WISD01000001-WISD01000242
WGS_SCAFLD  NZ_WISD01000001-NZ_WISD01000242
//
LOCUS       NZ_JBJMXR010000000   4694128 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Infantis strain
            YZU1479, whole genome shotgun sequencing project.
ACCESSION   NZ_JBJMXR000000000
VERSION     NZ_JBJMXR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45124521
            Assembly: GCF_045809225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Infantis
  ORGANISM  Salmonella enterica subsp. enterica serovar Infantis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4694128)
  AUTHORS   Mang,C.
  TITLE     Salmonella enterica subsp. enterica serovar Infantis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4694128)
  AUTHORS   Mang,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2024) Jiangsu Key Laboratory of Zoonosis,
            Yangzhou University, 48 East Wenhui Road, Yangzhou, Jiangsu 225009,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJMXR000000000.1.
            The Salmonella enterica subsp. enterica serovar Infantis whole
            genome shotgun (WGS) project has the project accession
            NZ_JBJMXR000000000.  This version of the project (01) has the
            accession number NZ_JBJMXR010000000, and consists of sequences
            JBJMXR010000001-JBJMXR010000059.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 20-DEC-2021
            Assembly Method        :: SPAdes v. SPAdes 3.15
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045809225.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:53:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,592
            CDSs (total)                      :: 4,488
            Genes (coding)                    :: 4,374
            CDSs (with protein)               :: 4,374
            Genes (RNA)                       :: 104
            rRNAs                             :: 5, 3, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 5, 2, 7 (5S, 16S, 23S)
            tRNAs                             :: 72
            ncRNAs                            :: 17
            Pseudo Genes (total)              :: 114
            CDSs (without protein)            :: 114
            Pseudo Genes (ambiguous residues) :: 0 of 114
            Pseudo Genes (frameshifted)       :: 48 of 114
            Pseudo Genes (incomplete)         :: 85 of 114
            Pseudo Genes (internal stop)      :: 16 of 114
            Pseudo Genes (multiple problems)  :: 32 of 114
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4694128
                     /organism="Salmonella enterica subsp. enterica serovar
                     Infantis"
                     /mol_type="genomic DNA"
                     /strain="YZU1479"
                     /serovar="Infantis"
                     /isolation_source="equipment"
                     /sub_species="enterica"
                     /db_xref="taxon:595"
                     /geo_loc_name="China: Nan Tong"
                     /collection_date="2019-09-26"
                     /collected_by="Meng Chuang"
WGS         JBJMXR010000001-JBJMXR010000059
WGS_SCAFLD  NZ_JBJMXR010000001-NZ_JBJMXR010000059
//
LOCUS       NZ_WIRP01000000      6986841 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium meliloti strain KH16b, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WIRP00000000
VERSION     NZ_WIRP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766402
            Assembly: GCF_009599845.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium meliloti (Rhizobium meliloti)
  ORGANISM  Sinorhizobium meliloti
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 6986841)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6986841)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WIRP00000000.1.
            The Sinorhizobium meliloti whole genome shotgun (WGS) project has
            the project accession NZ_WIRP00000000.  This version of the project
            (01) has the accession number NZ_WIRP01000000, and consists of
            sequences WIRP01000001-WIRP01000242.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009599845.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:53:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,773
            CDSs (total)                      :: 6,688
            Genes (coding)                    :: 6,389
            CDSs (with protein)               :: 6,389
            Genes (RNA)                       :: 85
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 299
            CDSs (without protein)            :: 299
            Pseudo Genes (ambiguous residues) :: 0 of 299
            Pseudo Genes (frameshifted)       :: 169 of 299
            Pseudo Genes (incomplete)         :: 207 of 299
            Pseudo Genes (internal stop)      :: 20 of 299
            Pseudo Genes (multiple problems)  :: 90 of 299
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6986841
                     /organism="Sinorhizobium meliloti"
                     /mol_type="genomic DNA"
                     /strain="KH16b"
                     /isolation_source="plant root nodules"
                     /host="Medicago truncatula"
                     /db_xref="taxon:382"
                     /geo_loc_name="France"
WGS         WIRP01000001-WIRP01000242
WGS_SCAFLD  NZ_WIRP01000001-NZ_WIRP01000242
//
LOCUS       NZ_JBJCJB010000000   2691419 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain Sa13358, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJCJB000000000
VERSION     NZ_JBJCJB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43403995
            Assembly: GCF_045760525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2691419)
  AUTHORS   Pindaru,A., Barbu,I.C., Sarbu,E., Mitache,M., Marutescu,L. and
            Chifiriuc,C.
  TITLE     Advanced Algorithm for Assessing Antimicrobial and Anti-Pathogenic
            Efficacy of Chemical Disinfectants Against Resistant ESKAPE
            Bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2691419)
  AUTHORS   Barbu,I.C., Gheorghe-Barbu,I., Dragomir,R.-I., Paraschiv,S.,
            Banica,L. and Surleac,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2024) Microbiology, University of Bucharest,
            Independentei 91-95, Bucharest 050095, Romania
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCJB000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBJCJB000000000.  This version of the
            project (01) has the accession number NZ_JBJCJB010000000, and
            consists of sequences JBJCJB010000001-JBJCJB010000722.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 06-JUL-2024
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 22x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045760525.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:28:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,904
            CDSs (total)                      :: 2,849
            Genes (coding)                    :: 2,658
            CDSs (with protein)               :: 2,658
            Genes (RNA)                       :: 55
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 191
            CDSs (without protein)            :: 191
            Pseudo Genes (ambiguous residues) :: 0 of 191
            Pseudo Genes (frameshifted)       :: 36 of 191
            Pseudo Genes (incomplete)         :: 151 of 191
            Pseudo Genes (internal stop)      :: 19 of 191
            Pseudo Genes (multiple problems)  :: 14 of 191
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2691419
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="Sa13358"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Romania: Galati"
                     /collection_date="2020"
WGS         JBJCJB010000001-JBJCJB010000722
WGS_SCAFLD  NZ_JBJCJB010000001-NZ_JBJCJB010000722
//
LOCUS       NZ_JBJNWF010000000   2832972 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain SVF2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJNWF000000000
VERSION     NZ_JBJNWF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45158357
            Assembly: GCF_045897435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2832972)
  AUTHORS   Letuka,L. and George,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2024) Life Sciences, Central University of
            Technology, 1 Park road, Bloemfontein, Free state 9300, South
            Africa
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJNWF000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBJNWF000000000.  This version of the
            project (01) has the accession number NZ_JBJNWF010000000, and
            consists of sequences JBJNWF010000001-JBJNWF010000003.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: HGAP v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 140.0x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045897435.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 14:07:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,836
            CDSs (total)                      :: 2,755
            Genes (coding)                    :: 2,664
            CDSs (with protein)               :: 2,664
            Genes (RNA)                       :: 81
            rRNAs                             :: 7, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 91
            CDSs (without protein)            :: 91
            Pseudo Genes (ambiguous residues) :: 0 of 91
            Pseudo Genes (frameshifted)       :: 45 of 91
            Pseudo Genes (incomplete)         :: 37 of 91
            Pseudo Genes (internal stop)      :: 23 of 91
            Pseudo Genes (multiple problems)  :: 12 of 91
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2832972
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="SVF2"
                     /isolation_source="food"
                     /db_xref="taxon:1280"
                     /geo_loc_name="South Africa: Bloemfontein"
                     /lat_lon="29.1303 S 26.2358 E"
                     /collection_date="2022"
                     /collected_by="Letlotlo Letuka"
WGS         JBJNWF010000001-JBJNWF010000003
WGS_SCAFLD  NZ_JBJNWF010000001-NZ_JBJNWF010000003
//
LOCUS       NZ_JBCPSV010000000   2766185 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain EC4, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPSV000000000
VERSION     NZ_JBCPSV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065892
            Assembly: GCF_045909435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2766185)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2766185)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPSV000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPSV000000000.  This version of the
            project (01) has the accession number NZ_JBCPSV010000000, and
            consists of sequences JBCPSV010000001-JBCPSV010000078.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045909435.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:48:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,771
            CDSs (total)                      :: 2,711
            Genes (coding)                    :: 2,644
            CDSs (with protein)               :: 2,644
            Genes (RNA)                       :: 60
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 39 of 67
            Pseudo Genes (incomplete)         :: 30 of 67
            Pseudo Genes (internal stop)      :: 15 of 67
            Pseudo Genes (multiple problems)  :: 15 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2766185
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="EC4"
                     /isolation_source="Nose swabs from mastitis dairy cows"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Inner Mongolia autonomous region"
                     /collection_date="2020-08"
                     /collected_by="Zekun Li"
WGS         JBCPSV010000001-JBCPSV010000078
WGS_SCAFLD  NZ_JBCPSV010000001-NZ_JBCPSV010000078
//
LOCUS       NZ_WIRJ01000000      7143046 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium meliloti strain HM007-10, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WIRJ00000000
VERSION     NZ_WIRJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766394
            Assembly: GCF_009600055.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium meliloti (Rhizobium meliloti)
  ORGANISM  Sinorhizobium meliloti
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 7143046)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7143046)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WIRJ00000000.1.
            The Sinorhizobium meliloti whole genome shotgun (WGS) project has
            the project accession NZ_WIRJ00000000.  This version of the project
            (01) has the accession number NZ_WIRJ01000000, and consists of
            sequences WIRJ01000001-WIRJ01000216.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009600055.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:00:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,880
            CDSs (total)                      :: 6,799
            Genes (coding)                    :: 6,521
            CDSs (with protein)               :: 6,521
            Genes (RNA)                       :: 81
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 278
            CDSs (without protein)            :: 278
            Pseudo Genes (ambiguous residues) :: 0 of 278
            Pseudo Genes (frameshifted)       :: 155 of 278
            Pseudo Genes (incomplete)         :: 183 of 278
            Pseudo Genes (internal stop)      :: 19 of 278
            Pseudo Genes (multiple problems)  :: 75 of 278
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7143046
                     /organism="Sinorhizobium meliloti"
                     /mol_type="genomic DNA"
                     /strain="HM007-10"
                     /isolation_source="plant root nodules"
                     /host="Medicago truncatula"
                     /db_xref="taxon:382"
                     /geo_loc_name="France"
WGS         WIRJ01000001-WIRJ01000216
WGS_SCAFLD  NZ_WIRJ01000001-NZ_WIRJ01000216
//
LOCUS       NZ_JBCPSY010000000   2688939 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain EB6, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPSY000000000
VERSION     NZ_JBCPSY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065889
            Assembly: GCF_045909555.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2688939)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2688939)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPSY000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPSY000000000.  This version of the
            project (01) has the accession number NZ_JBCPSY010000000, and
            consists of sequences JBCPSY010000001-JBCPSY010000072.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045909555.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:45:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,639
            CDSs (total)                      :: 2,583
            Genes (coding)                    :: 2,472
            CDSs (with protein)               :: 2,472
            Genes (RNA)                       :: 56
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 0 of 111
            Pseudo Genes (frameshifted)       :: 59 of 111
            Pseudo Genes (incomplete)         :: 44 of 111
            Pseudo Genes (internal stop)      :: 22 of 111
            Pseudo Genes (multiple problems)  :: 11 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2688939
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="EB6"
                     /isolation_source="Mastitis milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Inner Mongolia autonomous region"
                     /collection_date="2020-08"
                     /collected_by="Zekun Li"
WGS         JBCPSY010000001-JBCPSY010000072
WGS_SCAFLD  NZ_JBCPSY010000001-NZ_JBCPSY010000072
//
LOCUS       NZ_WITA01000000      6933276 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium fredii strain USDA207, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WITA00000000
VERSION     NZ_WITA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766439
            Assembly: GCF_009601515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium fredii (Rhizobium fredii)
  ORGANISM  Sinorhizobium fredii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 6933276)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6933276)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WITA00000000.1.
            The Sinorhizobium fredii whole genome shotgun (WGS) project has the
            project accession NZ_WITA00000000.  This version of the project
            (01) has the accession number NZ_WITA01000000, and consists of
            sequences WITA01000001-WITA01000287.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009601515.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:00:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,708
            CDSs (total)                      :: 6,633
            Genes (coding)                    :: 6,283
            CDSs (with protein)               :: 6,283
            Genes (RNA)                       :: 75
            rRNAs                             :: 5, 2, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 2, 5 (5S, 16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 350
            CDSs (without protein)            :: 350
            Pseudo Genes (ambiguous residues) :: 0 of 350
            Pseudo Genes (frameshifted)       :: 159 of 350
            Pseudo Genes (incomplete)         :: 243 of 350
            Pseudo Genes (internal stop)      :: 35 of 350
            Pseudo Genes (multiple problems)  :: 79 of 350
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6933276
                     /organism="Sinorhizobium fredii"
                     /mol_type="genomic DNA"
                     /strain="USDA207"
                     /isolation_source="plant root nodules"
                     /host="Glycine max"
                     /db_xref="taxon:380"
                     /geo_loc_name="China"
WGS         WITA01000001-WITA01000287
WGS_SCAFLD  NZ_WITA01000001-NZ_WITA01000287
//
LOCUS       NZ_JBCPTG010000000   2743367 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain EA3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPTG000000000
VERSION     NZ_JBCPTG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065881
            Assembly: GCF_045909695.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2743367)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2743367)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPTG000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPTG000000000.  This version of the
            project (01) has the accession number NZ_JBCPTG010000000, and
            consists of sequences JBCPTG010000001-JBCPTG010000110.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045909695.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:53:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,724
            CDSs (total)                      :: 2,668
            Genes (coding)                    :: 2,552
            CDSs (with protein)               :: 2,552
            Genes (RNA)                       :: 56
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 116
            CDSs (without protein)            :: 116
            Pseudo Genes (ambiguous residues) :: 0 of 116
            Pseudo Genes (frameshifted)       :: 58 of 116
            Pseudo Genes (incomplete)         :: 49 of 116
            Pseudo Genes (internal stop)      :: 21 of 116
            Pseudo Genes (multiple problems)  :: 10 of 116
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2743367
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="EA3"
                     /isolation_source="Raw milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Inner Mongolia autonomous region"
                     /collection_date="2020-08"
                     /collected_by="Zekun Li"
WGS         JBCPTG010000001-JBCPTG010000110
WGS_SCAFLD  NZ_JBCPTG010000001-NZ_JBCPTG010000110
//
LOCUS       NZ_JBCPTM010000000   2778553 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain CA1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPTM000000000
VERSION     NZ_JBCPTM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065875
            Assembly: GCF_045909795.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2778553)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2778553)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPTM000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPTM000000000.  This version of the
            project (01) has the accession number NZ_JBCPTM010000000, and
            consists of sequences JBCPTM010000001-JBCPTM010000147.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045909795.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:53:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,764
            CDSs (total)                      :: 2,704
            Genes (coding)                    :: 2,583
            CDSs (with protein)               :: 2,583
            Genes (RNA)                       :: 60
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 121
            CDSs (without protein)            :: 121
            Pseudo Genes (ambiguous residues) :: 1 of 121
            Pseudo Genes (frameshifted)       :: 60 of 121
            Pseudo Genes (incomplete)         :: 52 of 121
            Pseudo Genes (internal stop)      :: 24 of 121
            Pseudo Genes (multiple problems)  :: 12 of 121
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2778553
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="CA1"
                     /isolation_source="Raw milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Inner Mongolia autonomous region"
                     /collection_date="2020-08"
                     /collected_by="Zekun Li"
WGS         JBCPTM010000001-JBCPTM010000147
WGS_SCAFLD  NZ_JBCPTM010000001-NZ_JBCPTM010000147
//
LOCUS       NZ_JBCPTV010000000   2881381 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain 82, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPTV000000000
VERSION     NZ_JBCPTV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065866
            Assembly: GCF_045909995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2881381)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2881381)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPTV000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPTV000000000.  This version of the
            project (01) has the accession number NZ_JBCPTV010000000, and
            consists of sequences JBCPTV010000001-JBCPTV010000139.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045909995.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:56:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,942
            CDSs (total)                      :: 2,881
            Genes (coding)                    :: 2,762
            CDSs (with protein)               :: 2,762
            Genes (RNA)                       :: 61
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 119
            CDSs (without protein)            :: 119
            Pseudo Genes (ambiguous residues) :: 0 of 119
            Pseudo Genes (frameshifted)       :: 47 of 119
            Pseudo Genes (incomplete)         :: 62 of 119
            Pseudo Genes (internal stop)      :: 25 of 119
            Pseudo Genes (multiple problems)  :: 14 of 119
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2881381
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="82"
                     /isolation_source="Raw milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Henan"
                     /collection_date="2020-06"
                     /collected_by="Zekun Li"
WGS         JBCPTV010000001-JBCPTV010000139
WGS_SCAFLD  NZ_JBCPTV010000001-NZ_JBCPTV010000139
//
LOCUS       NZ_WISU01000000      7024372 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium meliloti strain T027, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WISU00000000
VERSION     NZ_WISU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766433
            Assembly: GCF_009601605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium meliloti (Rhizobium meliloti)
  ORGANISM  Sinorhizobium meliloti
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 7024372)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7024372)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WISU00000000.1.
            The Sinorhizobium meliloti whole genome shotgun (WGS) project has
            the project accession NZ_WISU00000000.  This version of the project
            (01) has the accession number NZ_WISU01000000, and consists of
            sequences WISU01000001-WISU01000187.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009601605.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:05:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,657
            CDSs (total)                      :: 6,589
            Genes (coding)                    :: 6,304
            CDSs (with protein)               :: 6,304
            Genes (RNA)                       :: 68
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 285
            CDSs (without protein)            :: 285
            Pseudo Genes (ambiguous residues) :: 0 of 285
            Pseudo Genes (frameshifted)       :: 171 of 285
            Pseudo Genes (incomplete)         :: 188 of 285
            Pseudo Genes (internal stop)      :: 24 of 285
            Pseudo Genes (multiple problems)  :: 91 of 285
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7024372
                     /organism="Sinorhizobium meliloti"
                     /mol_type="genomic DNA"
                     /strain="T027"
                     /isolation_source="plant root nodules"
                     /host="Medicago truncatula"
                     /db_xref="taxon:382"
                     /geo_loc_name="Tunisia"
WGS         WISU01000001-WISU01000187
WGS_SCAFLD  NZ_WISU01000001-NZ_WISU01000187
//
LOCUS       NZ_JBJJNN010000000   2815237 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain MRSA_40_Hy, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJJNN000000000
VERSION     NZ_JBJJNN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44253512
            Assembly: GCF_045801125.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2815237)
  AUTHORS   Cipriani,G., Mazzon,R., Helmersen,K., Wagner,G., Aamot,H.V. and
            Ferreira,F.A.
  TITLE     Evaluation of whole genome sequencing protocols for detection of
            antimicrobial resistance, virulence factors, and mobile genetic
            elements in antimicrobial-resistant bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2815237)
  AUTHORS   Cipriani,G., Helmersen,K., Mazzon,R., Wagner,G., Aamot,H.V. and
            Ferreira,F.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-NOV-2024) Department of Microbiology, Immunology and
            Parasitology (MIP), Universidade Federal de Santa Catarina (UFSC),
            Trindade campus, setor F, CCB block G, Florianopolis 88040-900,
            Brazil
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJJNN000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBJJNN000000000.  This version of the
            project (01) has the accession number NZ_JBJJNN010000000, and
            consists of sequences JBJJNN010000001-JBJJNN010000011.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Unicycler v. v.0.5.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: GridION; Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045801125.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:53:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,797
            CDSs (total)                      :: 2,716
            Genes (coding)                    :: 2,583
            CDSs (with protein)               :: 2,583
            Genes (RNA)                       :: 81
            rRNAs                             :: 6, 7, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 5, 6 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 133
            CDSs (without protein)            :: 133
            Pseudo Genes (ambiguous residues) :: 0 of 133
            Pseudo Genes (frameshifted)       :: 86 of 133
            Pseudo Genes (incomplete)         :: 43 of 133
            Pseudo Genes (internal stop)      :: 29 of 133
            Pseudo Genes (multiple problems)  :: 22 of 133
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2815237
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="MRSA_40_Hy"
                     /isolation_source="clinical sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Norway"
                     /lat_lon="59.93 N 10.99 E"
                     /collected_by="Ahus"
WGS         JBJJNN010000001-JBJJNN010000011
WGS_SCAFLD  NZ_JBJJNN010000001-NZ_JBJJNN010000011
//
LOCUS       NZ_JAACLK010000000   5138168 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Serratia marcescens strain SER_501, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAACLK000000000
VERSION     NZ_JAACLK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13897177
            Assembly: GCF_009939185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (bases 1 to 5138168)
  AUTHORS   Iovleva,A.V., Doi,Y., Jimenez,A. and Abbo,L.M.
  TITLE     Outbreak of KPC-3-producing Serratia marcescens in South Florida
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5138168)
  AUTHORS   Iovleva,A.V., Doi,Y., Jimenez,A. and Abbo,L.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JAN-2020) Medicine/Infectious Diseases, University of
            Pittsburgh, Scaife Hall, Suite 829 3550 Terrace Street, Pittsburgh,
            PA 15213, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAACLK000000000.1.
            The Serratia marcescens whole genome shotgun (WGS) project has the
            project accession NZ_JAACLK000000000.  This version of the project
            (01) has the accession number NZ_JAACLK010000000, and consists of
            sequences JAACLK010000001-JAACLK010000052.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 84x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009939185.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:58:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,920
            CDSs (total)                      :: 4,811
            Genes (coding)                    :: 4,767
            CDSs (with protein)               :: 4,767
            Genes (RNA)                       :: 109
            rRNAs                             :: 7, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1 (5S, 23S)
            partial rRNAs                     :: 1, 4, 1 (5S, 16S, 23S)
            tRNAs                             :: 82
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 45
            CDSs (without protein)            :: 44
            Pseudo Genes (ambiguous residues) :: 0 of 45
            Pseudo Genes (frameshifted)       :: 7 of 45
            Pseudo Genes (incomplete)         :: 38 of 45
            Pseudo Genes (internal stop)      :: 4 of 45
            Pseudo Genes (multiple problems)  :: 4 of 45
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5138168
                     /organism="Serratia marcescens"
                     /mol_type="genomic DNA"
                     /strain="SER_501"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:615"
                     /geo_loc_name="USA: Miami"
                     /lat_lon="25.7617 N 80.1918 W"
                     /collection_date="2018"
                     /collected_by="Jackson Memorial Hospital"
WGS         JAACLK010000001-JAACLK010000052
WGS_SCAFLD  NZ_JAACLK010000001-NZ_JAACLK010000052
//
LOCUS       NZ_WIRQ01000000      6883532 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium meliloti strain KH30a, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WIRQ00000000
VERSION     NZ_WIRQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766403
            Assembly: GCF_009599805.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium meliloti (Rhizobium meliloti)
  ORGANISM  Sinorhizobium meliloti
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 6883532)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6883532)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WIRQ00000000.1.
            The Sinorhizobium meliloti whole genome shotgun (WGS) project has
            the project accession NZ_WIRQ00000000.  This version of the project
            (01) has the accession number NZ_WIRQ01000000, and consists of
            sequences WIRQ01000001-WIRQ01000151.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009599805.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:42:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,562
            CDSs (total)                      :: 6,478
            Genes (coding)                    :: 6,240
            CDSs (with protein)               :: 6,240
            Genes (RNA)                       :: 84
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 238
            CDSs (without protein)            :: 238
            Pseudo Genes (ambiguous residues) :: 1 of 238
            Pseudo Genes (frameshifted)       :: 138 of 238
            Pseudo Genes (incomplete)         :: 146 of 238
            Pseudo Genes (internal stop)      :: 26 of 238
            Pseudo Genes (multiple problems)  :: 68 of 238
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6883532
                     /organism="Sinorhizobium meliloti"
                     /mol_type="genomic DNA"
                     /strain="KH30a"
                     /isolation_source="plant root nodules"
                     /host="Medicago truncatula"
                     /db_xref="taxon:382"
                     /geo_loc_name="France"
WGS         WIRQ01000001-WIRQ01000151
WGS_SCAFLD  NZ_WIRQ01000001-NZ_WIRQ01000151
//
LOCUS       NZ_WISM01000000      7206247 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium meliloti strain M249, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WISM00000000
VERSION     NZ_WISM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766425
            Assembly: GCF_009601205.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium meliloti (Rhizobium meliloti)
  ORGANISM  Sinorhizobium meliloti
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 7206247)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7206247)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WISM00000000.1.
            The Sinorhizobium meliloti whole genome shotgun (WGS) project has
            the project accession NZ_WISM00000000.  This version of the project
            (01) has the accession number NZ_WISM01000000, and consists of
            sequences WISM01000001-WISM01000273.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009601205.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:57:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,026
            CDSs (total)                      :: 6,947
            Genes (coding)                    :: 6,521
            CDSs (with protein)               :: 6,521
            Genes (RNA)                       :: 79
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 426
            CDSs (without protein)            :: 426
            Pseudo Genes (ambiguous residues) :: 0 of 426
            Pseudo Genes (frameshifted)       :: 242 of 426
            Pseudo Genes (incomplete)         :: 286 of 426
            Pseudo Genes (internal stop)      :: 41 of 426
            Pseudo Genes (multiple problems)  :: 127 of 426
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7206247
                     /organism="Sinorhizobium meliloti"
                     /mol_type="genomic DNA"
                     /strain="M249"
                     /isolation_source="plant root nodules"
                     /host="Medicago truncatula"
                     /db_xref="taxon:382"
                     /geo_loc_name="Jordan"
WGS         WISM01000001-WISM01000273
WGS_SCAFLD  NZ_WISM01000001-NZ_WISM01000273
//
LOCUS       NZ_CAYTCL010000000   2708387 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain MSSA02451 isolate MSSA02451, whole
            genome shotgun sequencing project.
ACCESSION   NZ_CAYTCL000000000
VERSION     NZ_CAYTCL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA117477668
            Assembly: GCF_964436425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2708387)
  AUTHORS   Reuter,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2024) Universitaetsklinikum Freiburg, Institute
            for infection prevention and control, Breisacher Strasse 115B,
            79106 Freiburg, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAYTCL000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_CAYTCL000000000.  This version of the
            project (01) has the accession number NZ_CAYTCL010000000, and
            consists of sequences CAYTCL010000001-CAYTCL010000034.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964436425.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:25:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,680
            CDSs (total)                      :: 2,613
            Genes (coding)                    :: 2,526
            CDSs (with protein)               :: 2,526
            Genes (RNA)                       :: 67
            rRNAs                             :: 3, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1 (5S, 16S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 87
            CDSs (without protein)            :: 87
            Pseudo Genes (ambiguous residues) :: 0 of 87
            Pseudo Genes (frameshifted)       :: 33 of 87
            Pseudo Genes (incomplete)         :: 52 of 87
            Pseudo Genes (internal stop)      :: 25 of 87
            Pseudo Genes (multiple problems)  :: 20 of 87
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2708387
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="MSSA02451"
                     /isolate="MSSA02451"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Germany"
                     /lat_lon="47.99 N 7.84 E"
                     /collection_date="2019"
WGS         CAYTCL010000001-CAYTCL010000034
WGS_SCAFLD  NZ_CAYTCL010000001-NZ_CAYTCL010000034
//
LOCUS       NZ_NAZF01000000      5001177 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Typhimurium strain
            174/01, whole genome shotgun sequencing project.
ACCESSION   NZ_NAZF00000000
VERSION     NZ_NAZF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06627137
            Assembly: GCF_045838615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Typhimurium (Salmonella
            typhimurium)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhimurium
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5001177)
  AUTHORS   Rodicio,M.R.
  TITLE     A full genome of Salmonella enterica serovar Typhimurium
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5001177)
  AUTHORS   Rodicio,M.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAR-2017) Functional Biology, University of Oviedo,
            Julian Claveria, Oviedo, Asturias 33006, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NAZF00000000.1.
            The Salmonella enterica subsp. enterica serovar Typhimurium whole
            genome shotgun (WGS) project has the project accession
            NZ_NAZF00000000.  This version of the project (01) has the
            accession number NZ_NAZF01000000, and consists of sequences
            NAZF01000001-NAZF01000064.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.10.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045838615.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 14:00:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,938
            CDSs (total)                      :: 4,843
            Genes (coding)                    :: 4,703
            CDSs (with protein)               :: 4,703
            Genes (RNA)                       :: 95
            rRNAs                             :: 8, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 8 (5S)
            tRNAs                             :: 72
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 140
            CDSs (without protein)            :: 140
            Pseudo Genes (ambiguous residues) :: 0 of 140
            Pseudo Genes (frameshifted)       :: 45 of 140
            Pseudo Genes (incomplete)         :: 108 of 140
            Pseudo Genes (internal stop)      :: 21 of 140
            Pseudo Genes (multiple problems)  :: 32 of 140
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5001177
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhimurium"
                     /mol_type="genomic DNA"
                     /strain="174/01"
                     /serovar="Typhimurium"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90371"
                     /geo_loc_name="Spain: Asturias"
                     /lat_lon="43.357 N 5.868 W"
                     /collection_date="2001"
                     /collected_by="LSP"
WGS         NAZF01000001-NAZF01000064
WGS_SCAFLD  NZ_NAZF01000001-NZ_NAZF01000064
//
LOCUS       NZ_JBJLWL010000000   2841793 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain 100, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJLWL000000000
VERSION     NZ_JBJLWL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45122636
            Assembly: GCF_045800615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2841793)
  AUTHORS   Chen,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2024) Clinical Microbiology Laboratory, The
            Second Affiliated Hospital of Zhejiang University School of
            Medicine, Jiefang Road 88, Hangzhou, Zhejiang 310009, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJLWL000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBJLWL000000000.  This version of the
            project (01) has the accession number NZ_JBJLWL010000000, and
            consists of sequences JBJLWL010000001-JBJLWL010000037.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200.0x
            Sequencing Technology  :: PacBio Sequel
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800615.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:37:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,842
            CDSs (total)                      :: 2,778
            Genes (coding)                    :: 2,680
            CDSs (with protein)               :: 2,680
            Genes (RNA)                       :: 64
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 98
            CDSs (without protein)            :: 98
            Pseudo Genes (ambiguous residues) :: 0 of 98
            Pseudo Genes (frameshifted)       :: 43 of 98
            Pseudo Genes (incomplete)         :: 55 of 98
            Pseudo Genes (internal stop)      :: 24 of 98
            Pseudo Genes (multiple problems)  :: 20 of 98
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2841793
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="100"
                     /isolation_source="gut"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Zhejiang"
                     /lat_lon="30 N 121 E"
                     /collection_date="2024-01-02"
                     /collected_by="The Second Affiliated Hospital of Zhejiang
                     University School of Medicine"
WGS         JBJLWL010000001-JBJLWL010000037
WGS_SCAFLD  NZ_JBJLWL010000001-NZ_JBJLWL010000037
//
LOCUS       NZ_WISW01000000      7139056 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium meliloti strain T094, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WISW00000000
VERSION     NZ_WISW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766435
            Assembly: GCF_009601415.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium meliloti (Rhizobium meliloti)
  ORGANISM  Sinorhizobium meliloti
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 7139056)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7139056)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WISW00000000.1.
            The Sinorhizobium meliloti whole genome shotgun (WGS) project has
            the project accession NZ_WISW00000000.  This version of the project
            (01) has the accession number NZ_WISW01000000, and consists of
            sequences WISW01000001-WISW01000195.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009601415.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:03:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,906
            CDSs (total)                      :: 6,827
            Genes (coding)                    :: 6,569
            CDSs (with protein)               :: 6,569
            Genes (RNA)                       :: 79
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 258
            CDSs (without protein)            :: 258
            Pseudo Genes (ambiguous residues) :: 0 of 258
            Pseudo Genes (frameshifted)       :: 148 of 258
            Pseudo Genes (incomplete)         :: 157 of 258
            Pseudo Genes (internal stop)      :: 30 of 258
            Pseudo Genes (multiple problems)  :: 71 of 258
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7139056
                     /organism="Sinorhizobium meliloti"
                     /mol_type="genomic DNA"
                     /strain="T094"
                     /isolation_source="plant root nodules"
                     /host="Medicago truncatula"
                     /db_xref="taxon:382"
                     /geo_loc_name="Tunisia"
WGS         WISW01000001-WISW01000195
WGS_SCAFLD  NZ_WISW01000001-NZ_WISW01000195
//
LOCUS       NZ_VISX01000000      6635687 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium medicae strain M14-1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VISX00000000
VERSION     NZ_VISX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11512014
            Assembly: GCF_007827675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium medicae (Ensifer medicae)
  ORGANISM  Sinorhizobium medicae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 6635687)
  AUTHORS   Whitman,W.
  TITLE     Genomic Encyclopedia of Type Strains, Phase IV (KMG-V): Genome
            sequencing to study the core and pangenomes of soil and
            plant-associated prokaryotes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6635687)
  AUTHORS   Whitman,W., Huntemann,M., Clum,A., Pillay,M., Palaniappan,K.,
            Varghese,N., Mikhailova,N., Stamatis,D., Reddy,T., Daum,C.,
            Shapiro,N., Ivanova,N., Kyrpides,N. and Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JUN-2019) Prokaryotic Super Group, DOE Joint Genome
            Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VISX00000000.1.
            The Sinorhizobium medicae whole genome shotgun (WGS) project has
            the project accession NZ_VISX00000000.  This version of the project
            (01) has the accession number NZ_VISX01000000, and consists of
            sequences VISX01000001-VISX01000093.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 226.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007827675.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:36:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,380
            CDSs (total)                      :: 6,325
            Genes (coding)                    :: 6,040
            CDSs (with protein)               :: 6,040
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 285
            CDSs (without protein)            :: 285
            Pseudo Genes (ambiguous residues) :: 0 of 285
            Pseudo Genes (frameshifted)       :: 164 of 285
            Pseudo Genes (incomplete)         :: 190 of 285
            Pseudo Genes (internal stop)      :: 37 of 285
            Pseudo Genes (multiple problems)  :: 92 of 285
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6635687
                     /organism="Sinorhizobium medicae"
                     /mol_type="genomic DNA"
                     /strain="M14-1"
                     /db_xref="taxon:110321"
WGS         VISX01000001-VISX01000093
WGS_SCAFLD  NZ_VISX01000001-NZ_VISX01000093
//
LOCUS       NZ_JAOWTB010000000   5032522 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Serratia nevei strain BSI_273.01, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAOWTB000000000
VERSION     NZ_JAOWTB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN31230862
            Assembly: GCF_030337475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Serratia nevei
  ORGANISM  Serratia nevei
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (bases 1 to 5032522)
  AUTHORS   Schwartz,D.J., Shalon,N., Wardenburg,K., DeVeaux,A., Wallace,M.A.,
            Hall-Moore,C., Ndao,I.M., Sullivan,J.E., Radmacher,P., Escobedo,M.,
            Burnham,C.D., Warner,B.B., Tarr,P.I. and Dantas,G.
  TITLE     Gut pathogen colonization precedes bloodstream infection in the
            neonatal intensive care unit
  JOURNAL   Sci Transl Med 15 (694), eadg5562 (2023)
   PUBMED   37134153
  REMARK    Erratum:[Sci Transl Med. 2024 May;16(745):eadp7701. doi:
            10.1126/scitranslmed.adp7701. PMID: 38691623]
REFERENCE   2  (bases 1 to 5032522)
  AUTHORS   Schwartz,D.J., Shalon,N., Wardenburg,K., Deveaux,A., Paruthiyil,S.,
            Wallace,M., Hall-Moore,C., Burnham,C.-A.D., Warner,B., Tarr,P.I.
            and Dantas,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2022) Department of Pediatrics, Washington
            University in St. Louis, 660 S. Euclid Ave, Saint Louis, MO 63110,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAOWTB000000000.1.
            The Serratia nevei whole genome shotgun (WGS) project has the
            project accession NZ_JAOWTB000000000.  This version of the project
            (01) has the accession number NZ_JAOWTB010000000, and consists of
            sequences JAOWTB010000001-JAOWTB010000018.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: SEP-2020
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_030337475.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:49:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,792
            CDSs (total)                      :: 4,693
            Genes (coding)                    :: 4,669
            CDSs (with protein)               :: 4,669
            Genes (RNA)                       :: 99
            rRNAs                             :: 6, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1 (5S, 23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 78
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 25
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 25
            Pseudo Genes (frameshifted)       :: 7 of 25
            Pseudo Genes (incomplete)         :: 17 of 25
            Pseudo Genes (internal stop)      :: 3 of 25
            Pseudo Genes (multiple problems)  :: 3 of 25
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5032522
                     /organism="Serratia nevei"
                     /mol_type="genomic DNA"
                     /strain="BSI_273.01"
                     /isolation_source="blood from hospitalized preterm
                     neonate"
                     /host="Homo sapiens"
                     /db_xref="taxon:2703794"
                     /geo_loc_name="USA"
                     /lat_lon="38.6270 N 90.1994 W"
                     /collection_date="2009-09/2013-08"
                     /collected_by="Washington University School of Medicine
                     Clinical Microbiology Laboratory"
WGS         JAOWTB010000001-JAOWTB010000018
WGS_SCAFLD  NZ_JAOWTB010000001-NZ_JAOWTB010000018
//
LOCUS       NZ_WISJ01000000      7128614 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium meliloti strain M210, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WISJ00000000
VERSION     NZ_WISJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766422
            Assembly: GCF_009601615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium meliloti (Rhizobium meliloti)
  ORGANISM  Sinorhizobium meliloti
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 7128614)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7128614)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WISJ00000000.1.
            The Sinorhizobium meliloti whole genome shotgun (WGS) project has
            the project accession NZ_WISJ00000000.  This version of the project
            (01) has the accession number NZ_WISJ01000000, and consists of
            sequences WISJ01000001-WISJ01000190.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009601615.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:04:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,851
            CDSs (total)                      :: 6,767
            Genes (coding)                    :: 6,468
            CDSs (with protein)               :: 6,468
            Genes (RNA)                       :: 84
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 299
            CDSs (without protein)            :: 299
            Pseudo Genes (ambiguous residues) :: 0 of 299
            Pseudo Genes (frameshifted)       :: 171 of 299
            Pseudo Genes (incomplete)         :: 182 of 299
            Pseudo Genes (internal stop)      :: 26 of 299
            Pseudo Genes (multiple problems)  :: 75 of 299
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7128614
                     /organism="Sinorhizobium meliloti"
                     /mol_type="genomic DNA"
                     /strain="M210"
                     /isolation_source="plant root nodules"
                     /host="Medicago noeana"
                     /db_xref="taxon:382"
                     /geo_loc_name="Turkey"
WGS         WISJ01000001-WISJ01000190
WGS_SCAFLD  NZ_WISJ01000001-NZ_WISJ01000190
//
LOCUS       NZ_WIRT01000000      6914831 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium medicae strain KH36b, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WIRT00000000
VERSION     NZ_WIRT00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766406
            Assembly: GCF_009599775.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium medicae (Ensifer medicae)
  ORGANISM  Sinorhizobium medicae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 6914831)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6914831)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WIRT00000000.1.
            The Sinorhizobium medicae whole genome shotgun (WGS) project has
            the project accession NZ_WIRT00000000.  This version of the project
            (01) has the accession number NZ_WIRT01000000, and consists of
            sequences WIRT01000001-WIRT01000178.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009599775.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:56:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,747
            CDSs (total)                      :: 6,661
            Genes (coding)                    :: 6,305
            CDSs (with protein)               :: 6,305
            Genes (RNA)                       :: 86
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 356
            CDSs (without protein)            :: 356
            Pseudo Genes (ambiguous residues) :: 0 of 356
            Pseudo Genes (frameshifted)       :: 213 of 356
            Pseudo Genes (incomplete)         :: 226 of 356
            Pseudo Genes (internal stop)      :: 41 of 356
            Pseudo Genes (multiple problems)  :: 109 of 356
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6914831
                     /organism="Sinorhizobium medicae"
                     /mol_type="genomic DNA"
                     /strain="KH36b"
                     /isolation_source="plant root nodules"
                     /host="Medicago truncatula"
                     /db_xref="taxon:110321"
                     /geo_loc_name="France"
WGS         WIRT01000001-WIRT01000178
WGS_SCAFLD  NZ_WIRT01000001-NZ_WIRT01000178
//
LOCUS       NZ_WIRW01000000      6863074 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium meliloti strain KH46b, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WIRW00000000
VERSION     NZ_WIRW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766409
            Assembly: GCF_009599835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium meliloti (Rhizobium meliloti)
  ORGANISM  Sinorhizobium meliloti
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 6863074)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6863074)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WIRW00000000.1.
            The Sinorhizobium meliloti whole genome shotgun (WGS) project has
            the project accession NZ_WIRW00000000.  This version of the project
            (01) has the accession number NZ_WIRW01000000, and consists of
            sequences WIRW01000001-WIRW01000171.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009599835.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:43:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,621
            CDSs (total)                      :: 6,539
            Genes (coding)                    :: 6,285
            CDSs (with protein)               :: 6,285
            Genes (RNA)                       :: 82
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 254
            CDSs (without protein)            :: 254
            Pseudo Genes (ambiguous residues) :: 0 of 254
            Pseudo Genes (frameshifted)       :: 147 of 254
            Pseudo Genes (incomplete)         :: 173 of 254
            Pseudo Genes (internal stop)      :: 25 of 254
            Pseudo Genes (multiple problems)  :: 84 of 254
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6863074
                     /organism="Sinorhizobium meliloti"
                     /mol_type="genomic DNA"
                     /strain="KH46b"
                     /isolation_source="plant root nodules"
                     /host="Medicago truncatula"
                     /db_xref="taxon:382"
                     /geo_loc_name="France"
WGS         WIRW01000001-WIRW01000171
WGS_SCAFLD  NZ_WIRW01000001-NZ_WIRW01000171
//
LOCUS       NZ_DATHXO010000000   2300494 bp    DNA     linear   ENV 27-MAR-2026
DEFINITION  MAG: Schnuerera sp. isolate SMAG_U16187, whole genome shotgun
            sequencing project.
ACCESSION   NZ_DATHXO000000000
VERSION     NZ_DATHXO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37935683
            Sequence Read Archive: SRR9721663
            Assembly: GCF_035459645.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq; TPA:assembly.
SOURCE      Schnuerera sp. (soil metagenome)
  ORGANISM  Schnuerera sp.
            Bacteria; Bacillati; Bacillota; Tissierellia; Tissierellales;
            Tepidimicrobiaceae; Schnuerera.
REFERENCE   1  (bases 1 to 2300494)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. doi:
            10.1038/s41467-023-44072-7. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2300494)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            DATHXO000000000.1.
            The Schnuerera sp. whole genome shotgun (WGS) project has the
            project accession NZ_DATHXO000000000.  This version of the project
            (01) has the accession number NZ_DATHXO010000000, and consists of
            sequences DATHXO010000001-DATHXO010000550.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_035459645.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:44:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,603
            CDSs (total)                      :: 2,562
            Genes (coding)                    :: 2,484
            CDSs (with protein)               :: 2,484
            Genes (RNA)                       :: 41
            rRNAs                             :: 1, 2 (5S, 16S)
            partial rRNAs                     :: 1, 2 (5S, 16S)
            tRNAs                             :: 36
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 78
            CDSs (without protein)            :: 78
            Pseudo Genes (ambiguous residues) :: 0 of 78
            Pseudo Genes (frameshifted)       :: 3 of 78
            Pseudo Genes (incomplete)         :: 74 of 78
            Pseudo Genes (internal stop)      :: 1 of 78
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2300494
                     /organism="Schnuerera sp."
                     /mol_type="genomic DNA"
                     /isolate="SMAG_U16187"
                     /isolation_source="soil"
                     /db_xref="taxon:2794844"
                     /environmental_sample
                     /geo_loc_name="India"
                     /lat_lon="26.25 N 80.23 E"
                     /metagenome_source="soil metagenome"
                     /metagenomic
WGS         DATHXO010000001-DATHXO010000550
WGS_SCAFLD  NZ_DATHXO010000001-NZ_DATHXO010000550
//
LOCUS       NZ_JBJMXY010000000   4647637 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Infantis strain
            YZU1486, whole genome shotgun sequencing project.
ACCESSION   NZ_JBJMXY000000000
VERSION     NZ_JBJMXY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45124528
            Assembly: GCF_045808925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Infantis
  ORGANISM  Salmonella enterica subsp. enterica serovar Infantis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4647637)
  AUTHORS   Mang,C.
  TITLE     Salmonella enterica subsp. enterica serovar Infantis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4647637)
  AUTHORS   Mang,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2024) Jiangsu Key Laboratory of Zoonosis,
            Yangzhou University, 48 East Wenhui Road, Yangzhou, Jiangsu 225009,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJMXY000000000.1.
            The Salmonella enterica subsp. enterica serovar Infantis whole
            genome shotgun (WGS) project has the project accession
            NZ_JBJMXY000000000.  This version of the project (01) has the
            accession number NZ_JBJMXY010000000, and consists of sequences
            JBJMXY010000001-JBJMXY010000059.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 20-DEC-2021
            Assembly Method        :: SPAdes v. SPAdes 3.15
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045808925.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:51:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,561
            CDSs (total)                      :: 4,454
            Genes (coding)                    :: 4,337
            CDSs (with protein)               :: 4,337
            Genes (RNA)                       :: 107
            rRNAs                             :: 4, 4, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 4, 3, 6 (5S, 16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 18
            Pseudo Genes (total)              :: 117
            CDSs (without protein)            :: 117
            Pseudo Genes (ambiguous residues) :: 0 of 117
            Pseudo Genes (frameshifted)       :: 48 of 117
            Pseudo Genes (incomplete)         :: 87 of 117
            Pseudo Genes (internal stop)      :: 17 of 117
            Pseudo Genes (multiple problems)  :: 32 of 117
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4647637
                     /organism="Salmonella enterica subsp. enterica serovar
                     Infantis"
                     /mol_type="genomic DNA"
                     /strain="YZU1486"
                     /serovar="Infantis"
                     /isolation_source="egg white"
                     /host="animal"
                     /sub_species="enterica"
                     /db_xref="taxon:595"
                     /geo_loc_name="China: Nan Tong"
                     /collection_date="2019-09-26"
                     /collected_by="Meng Chuang"
WGS         JBJMXY010000001-JBJMXY010000059
WGS_SCAFLD  NZ_JBJMXY010000001-NZ_JBJMXY010000059
//
LOCUS       NZ_WISV01000000      7363027 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium meliloti strain T073, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WISV00000000
VERSION     NZ_WISV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766434
            Assembly: GCF_009601355.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium meliloti (Rhizobium meliloti)
  ORGANISM  Sinorhizobium meliloti
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 7363027)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7363027)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WISV00000000.1.
            The Sinorhizobium meliloti whole genome shotgun (WGS) project has
            the project accession NZ_WISV00000000.  This version of the project
            (01) has the accession number NZ_WISV01000000, and consists of
            sequences WISV01000001-WISV01000266.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009601355.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:01:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,096
            CDSs (total)                      :: 7,021
            Genes (coding)                    :: 6,672
            CDSs (with protein)               :: 6,672
            Genes (RNA)                       :: 75
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 349
            CDSs (without protein)            :: 349
            Pseudo Genes (ambiguous residues) :: 0 of 349
            Pseudo Genes (frameshifted)       :: 179 of 349
            Pseudo Genes (incomplete)         :: 236 of 349
            Pseudo Genes (internal stop)      :: 24 of 349
            Pseudo Genes (multiple problems)  :: 85 of 349
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7363027
                     /organism="Sinorhizobium meliloti"
                     /mol_type="genomic DNA"
                     /strain="T073"
                     /isolation_source="plant root nodules"
                     /host="Medicago truncatula"
                     /db_xref="taxon:382"
                     /geo_loc_name="Tunisia"
WGS         WISV01000001-WISV01000266
WGS_SCAFLD  NZ_WISV01000001-NZ_WISV01000266
//
LOCUS       NZ_NAZH01000000      4888702 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Typhimurium strain LSP
            45/00, whole genome shotgun sequencing project.
ACCESSION   NZ_NAZH00000000
VERSION     NZ_NAZH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06627358
            Assembly: GCF_045838655.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Typhimurium (Salmonella
            typhimurium)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhimurium
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4888702)
  AUTHORS   Rodicio,M.R.
  TITLE     A full genome of Salmonella enterica serovar Typhimurium
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4888702)
  AUTHORS   Rodicio,M.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAR-2017) Functional Biology, University of Oviedo,
            Julian Claveria, Oviedo, Asturias 33006, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NAZH00000000.1.
            The Salmonella enterica subsp. enterica serovar Typhimurium whole
            genome shotgun (WGS) project has the project accession
            NZ_NAZH00000000.  This version of the project (01) has the
            accession number NZ_NAZH01000000, and consists of sequences
            NAZH01000001-NAZH01000071.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.10.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045838655.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 14:04:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,817
            CDSs (total)                      :: 4,721
            Genes (coding)                    :: 4,595
            CDSs (with protein)               :: 4,595
            Genes (RNA)                       :: 96
            rRNAs                             :: 6, 4, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 5, 3 (5S, 16S)
            tRNAs                             :: 74
            ncRNAs                            :: 11
            Pseudo Genes (total)              :: 126
            CDSs (without protein)            :: 126
            Pseudo Genes (ambiguous residues) :: 0 of 126
            Pseudo Genes (frameshifted)       :: 33 of 126
            Pseudo Genes (incomplete)         :: 107 of 126
            Pseudo Genes (internal stop)      :: 15 of 126
            Pseudo Genes (multiple problems)  :: 27 of 126
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4888702
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhimurium"
                     /mol_type="genomic DNA"
                     /strain="LSP 45/00"
                     /serovar="Typhimurium"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90371"
                     /geo_loc_name="Spain: Asturias"
                     /lat_lon="43.357 N 5.868 W"
                     /collection_date="2005"
                     /collected_by="LSP"
WGS         NAZH01000001-NAZH01000071
WGS_SCAFLD  NZ_NAZH01000001-NZ_NAZH01000071
//
LOCUS       NZ_WISF01000000      7237988 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium medicae strain M161, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WISF00000000
VERSION     NZ_WISF00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766418
            Assembly: GCF_009601295.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium medicae (Ensifer medicae)
  ORGANISM  Sinorhizobium medicae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 7237988)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7237988)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WISF00000000.1.
            The Sinorhizobium medicae whole genome shotgun (WGS) project has
            the project accession NZ_WISF00000000.  This version of the project
            (01) has the accession number NZ_WISF01000000, and consists of
            sequences WISF01000001-WISF01000221.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009601295.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:53:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,104
            CDSs (total)                      :: 7,020
            Genes (coding)                    :: 6,660
            CDSs (with protein)               :: 6,660
            Genes (RNA)                       :: 84
            rRNAs                             :: 5, 5, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 2 (5S, 16S, 23S)
            partial rRNAs                     :: 6 (23S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 360
            CDSs (without protein)            :: 360
            Pseudo Genes (ambiguous residues) :: 0 of 360
            Pseudo Genes (frameshifted)       :: 206 of 360
            Pseudo Genes (incomplete)         :: 236 of 360
            Pseudo Genes (internal stop)      :: 41 of 360
            Pseudo Genes (multiple problems)  :: 106 of 360
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7237988
                     /organism="Sinorhizobium medicae"
                     /mol_type="genomic DNA"
                     /strain="M161"
                     /isolation_source="plant root nodules"
                     /host="Medicago noeana"
                     /db_xref="taxon:110321"
                     /geo_loc_name="Syria"
WGS         WISF01000001-WISF01000221
WGS_SCAFLD  NZ_WISF01000001-NZ_WISF01000221
//
LOCUS       NZ_VISY01000000      6667919 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium medicae strain SF3.41, whole genome shotgun
            sequencing project.
ACCESSION   NZ_VISY00000000
VERSION     NZ_VISY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11511975
            Assembly: GCF_007827705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium medicae (Ensifer medicae)
  ORGANISM  Sinorhizobium medicae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 6667919)
  AUTHORS   Whitman,W.
  TITLE     Genomic Encyclopedia of Type Strains, Phase IV (KMG-V): Genome
            sequencing to study the core and pangenomes of soil and
            plant-associated prokaryotes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6667919)
  AUTHORS   Whitman,W., Huntemann,M., Clum,A., Pillay,M., Palaniappan,K.,
            Varghese,N., Mikhailova,N., Stamatis,D., Reddy,T., Daum,C.,
            Shapiro,N., Ivanova,N., Kyrpides,N. and Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JUN-2019) Prokaryotic Super Group, DOE Joint Genome
            Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VISY00000000.1.
            The Sinorhizobium medicae whole genome shotgun (WGS) project has
            the project accession NZ_VISY00000000.  This version of the project
            (01) has the accession number NZ_VISY01000000, and consists of
            sequences VISY01000001-VISY01000065.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 225.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007827705.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:38:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,350
            CDSs (total)                      :: 6,296
            Genes (coding)                    :: 6,053
            CDSs (with protein)               :: 6,053
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 243
            CDSs (without protein)            :: 243
            Pseudo Genes (ambiguous residues) :: 0 of 243
            Pseudo Genes (frameshifted)       :: 157 of 243
            Pseudo Genes (incomplete)         :: 153 of 243
            Pseudo Genes (internal stop)      :: 30 of 243
            Pseudo Genes (multiple problems)  :: 86 of 243
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6667919
                     /organism="Sinorhizobium medicae"
                     /mol_type="genomic DNA"
                     /strain="SF3.41"
                     /db_xref="taxon:110321"
WGS         VISY01000001-VISY01000065
WGS_SCAFLD  NZ_VISY01000001-NZ_VISY01000065
//
LOCUS       NZ_WISE01000000      7000883 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium meliloti strain M156, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WISE00000000
VERSION     NZ_WISE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766417
            Assembly: GCF_009601585.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium meliloti (Rhizobium meliloti)
  ORGANISM  Sinorhizobium meliloti
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 7000883)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7000883)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WISE00000000.1.
            The Sinorhizobium meliloti whole genome shotgun (WGS) project has
            the project accession NZ_WISE00000000.  This version of the project
            (01) has the accession number NZ_WISE01000000, and consists of
            sequences WISE01000001-WISE01000229.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009601585.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:58:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,734
            CDSs (total)                      :: 6,656
            Genes (coding)                    :: 6,340
            CDSs (with protein)               :: 6,340
            Genes (RNA)                       :: 78
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 316
            CDSs (without protein)            :: 316
            Pseudo Genes (ambiguous residues) :: 1 of 316
            Pseudo Genes (frameshifted)       :: 178 of 316
            Pseudo Genes (incomplete)         :: 191 of 316
            Pseudo Genes (internal stop)      :: 34 of 316
            Pseudo Genes (multiple problems)  :: 79 of 316
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7000883
                     /organism="Sinorhizobium meliloti"
                     /mol_type="genomic DNA"
                     /strain="M156"
                     /isolation_source="plant root nodules"
                     /host="Medicago rigidula"
                     /db_xref="taxon:382"
                     /geo_loc_name="Syria"
WGS         WISE01000001-WISE01000229
WGS_SCAFLD  NZ_WISE01000001-NZ_WISE01000229
//
LOCUS       NZ_JAACLL010000000   5158219 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Serratia marcescens strain SER_502, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAACLL000000000
VERSION     NZ_JAACLL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13897178
            Assembly: GCF_009939145.1
KEYWORDS    WGS; RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (bases 1 to 5158219)
  AUTHORS   Iovleva,A.V., Doi,Y., Jimenez,A. and Abbo,L.M.
  TITLE     Outbreak of KPC-3-producing Serratia marcescens in South Florida
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5158219)
  AUTHORS   Iovleva,A.V., Doi,Y., Jimenez,A. and Abbo,L.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JAN-2020) Medicine/Infectious Diseases, University of
            Pittsburgh, Scaife Hall, Suite 829 3550 Terrace Street, Pittsburgh,
            PA 15213, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAACLL000000000.1.
            The Serratia marcescens whole genome shotgun (WGS) project has the
            project accession NZ_JAACLL000000000.  This version of the project
            (01) has the accession number NZ_JAACLL010000000, and consists of
            sequences JAACLL010000001-JAACLL010000034.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 133x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009939145.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:09:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,901
            CDSs (total)                      :: 4,799
            Genes (coding)                    :: 4,756
            CDSs (with protein)               :: 4,756
            Genes (RNA)                       :: 102
            rRNAs                             :: 6, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 81
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 44
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 44
            Pseudo Genes (frameshifted)       :: 14 of 44
            Pseudo Genes (incomplete)         :: 31 of 44
            Pseudo Genes (internal stop)      :: 8 of 44
            Pseudo Genes (multiple problems)  :: 8 of 44
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5158219
                     /organism="Serratia marcescens"
                     /mol_type="genomic DNA"
                     /strain="SER_502"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:615"
                     /geo_loc_name="USA: Miami"
                     /lat_lon="25.7617 N 80.1918 W"
                     /collection_date="2018"
                     /collected_by="Jackson Memorial Hospital"
WGS         JAACLL010000001-JAACLL010000034
WGS_SCAFLD  NZ_JAACLL010000001-NZ_JAACLL010000034
//
LOCUS       NZ_JBJMXZ010000000   4647589 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Infantis strain
            YZU1487, whole genome shotgun sequencing project.
ACCESSION   NZ_JBJMXZ000000000
VERSION     NZ_JBJMXZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45124529
            Assembly: GCF_045808965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Infantis
  ORGANISM  Salmonella enterica subsp. enterica serovar Infantis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4647589)
  AUTHORS   Mang,C.
  TITLE     Salmonella enterica subsp. enterica serovar Infantis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4647589)
  AUTHORS   Mang,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2024) Jiangsu Key Laboratory of Zoonosis,
            Yangzhou University, 48 East Wenhui Road, Yangzhou, Jiangsu 225009,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJMXZ000000000.1.
            The Salmonella enterica subsp. enterica serovar Infantis whole
            genome shotgun (WGS) project has the project accession
            NZ_JBJMXZ000000000.  This version of the project (01) has the
            accession number NZ_JBJMXZ010000000, and consists of sequences
            JBJMXZ010000001-JBJMXZ010000061.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 20-DEC-2021
            Assembly Method        :: SPAdes v. SPAdes 3.15
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045808965.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:52:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,556
            CDSs (total)                      :: 4,449
            Genes (coding)                    :: 4,332
            CDSs (with protein)               :: 4,332
            Genes (RNA)                       :: 107
            rRNAs                             :: 4, 3, 7 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 3, 7 (5S, 16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 17
            Pseudo Genes (total)              :: 117
            CDSs (without protein)            :: 117
            Pseudo Genes (ambiguous residues) :: 0 of 117
            Pseudo Genes (frameshifted)       :: 48 of 117
            Pseudo Genes (incomplete)         :: 86 of 117
            Pseudo Genes (internal stop)      :: 17 of 117
            Pseudo Genes (multiple problems)  :: 32 of 117
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4647589
                     /organism="Salmonella enterica subsp. enterica serovar
                     Infantis"
                     /mol_type="genomic DNA"
                     /strain="YZU1487"
                     /serovar="Infantis"
                     /isolation_source="egg white"
                     /host="animal"
                     /sub_species="enterica"
                     /db_xref="taxon:595"
                     /geo_loc_name="China: Nan Tong"
                     /collection_date="2019-09-26"
                     /collected_by="Meng Chuang"
WGS         JBJMXZ010000001-JBJMXZ010000061
WGS_SCAFLD  NZ_JBJMXZ010000001-NZ_JBJMXZ010000061
//
LOCUS       NZ_JBJMXS010000000   4647998 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Infantis strain
            YZU1480, whole genome shotgun sequencing project.
ACCESSION   NZ_JBJMXS000000000
VERSION     NZ_JBJMXS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45124522
            Assembly: GCF_045809245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Infantis
  ORGANISM  Salmonella enterica subsp. enterica serovar Infantis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4647998)
  AUTHORS   Mang,C.
  TITLE     Salmonella enterica subsp. enterica serovar Infantis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4647998)
  AUTHORS   Mang,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2024) Jiangsu Key Laboratory of Zoonosis,
            Yangzhou University, 48 East Wenhui Road, Yangzhou, Jiangsu 225009,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJMXS000000000.1.
            The Salmonella enterica subsp. enterica serovar Infantis whole
            genome shotgun (WGS) project has the project accession
            NZ_JBJMXS000000000.  This version of the project (01) has the
            accession number NZ_JBJMXS010000000, and consists of sequences
            JBJMXS010000001-JBJMXS010000060.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 20-DEC-2021
            Assembly Method        :: SPAdes v. SPAdes 3.15
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045809245.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:42:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,562
            CDSs (total)                      :: 4,452
            Genes (coding)                    :: 4,333
            CDSs (with protein)               :: 4,333
            Genes (RNA)                       :: 110
            rRNAs                             :: 4, 4, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 4, 3, 7 (5S, 16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 19
            Pseudo Genes (total)              :: 119
            CDSs (without protein)            :: 119
            Pseudo Genes (ambiguous residues) :: 0 of 119
            Pseudo Genes (frameshifted)       :: 48 of 119
            Pseudo Genes (incomplete)         :: 88 of 119
            Pseudo Genes (internal stop)      :: 17 of 119
            Pseudo Genes (multiple problems)  :: 32 of 119
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4647998
                     /organism="Salmonella enterica subsp. enterica serovar
                     Infantis"
                     /mol_type="genomic DNA"
                     /strain="YZU1480"
                     /serovar="Infantis"
                     /isolation_source="egg shell"
                     /host="animal"
                     /sub_species="enterica"
                     /db_xref="taxon:595"
                     /geo_loc_name="China: Nan Tong"
                     /collection_date="2019-09-26"
                     /collected_by="Meng Chuang"
WGS         JBJMXS010000001-JBJMXS010000060
WGS_SCAFLD  NZ_JBJMXS010000001-NZ_JBJMXS010000060
//
LOCUS       NZ_NAZG01000000      5011606 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Typhimurium strain
            CNM179/02, whole genome shotgun sequencing project.
ACCESSION   NZ_NAZG00000000
VERSION     NZ_NAZG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06627357
            Assembly: GCF_045838635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Typhimurium (Salmonella
            typhimurium)
  ORGANISM  Salmonella enterica subsp. enterica serovar Typhimurium
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 5011606)
  AUTHORS   Rodicio,M.R.
  TITLE     A full genome of Salmonella enterica serovar Typhimurium
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5011606)
  AUTHORS   Rodicio,M.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-MAR-2017) Functional Biology, University of Oviedo,
            Julian Claveria, Oviedo, Asturias 33006, Spain
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            NAZG00000000.1.
            The Salmonella enterica subsp. enterica serovar Typhimurium whole
            genome shotgun (WGS) project has the project accession
            NZ_NAZG00000000.  This version of the project (01) has the
            accession number NZ_NAZG01000000, and consists of sequences
            NAZG01000001-NAZG01000085.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.10.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045838635.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:55:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,950
            CDSs (total)                      :: 4,845
            Genes (coding)                    :: 4,700
            CDSs (with protein)               :: 4,700
            Genes (RNA)                       :: 105
            rRNAs                             :: 8, 5, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1 (5S, 16S)
            partial rRNAs                     :: 3, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 12
            Pseudo Genes (total)              :: 145
            CDSs (without protein)            :: 145
            Pseudo Genes (ambiguous residues) :: 0 of 145
            Pseudo Genes (frameshifted)       :: 45 of 145
            Pseudo Genes (incomplete)         :: 114 of 145
            Pseudo Genes (internal stop)      :: 19 of 145
            Pseudo Genes (multiple problems)  :: 31 of 145
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5011606
                     /organism="Salmonella enterica subsp. enterica serovar
                     Typhimurium"
                     /mol_type="genomic DNA"
                     /strain="CNM179/02"
                     /serovar="Typhimurium"
                     /host="Homo sapiens"
                     /sub_species="enterica"
                     /db_xref="taxon:90371"
                     /geo_loc_name="Spain: Toledo"
                     /lat_lon="39.57 N 3.51 W"
                     /collection_date="2002"
                     /collected_by="CNM"
WGS         NAZG01000001-NAZG01000085
WGS_SCAFLD  NZ_NAZG01000001-NZ_NAZG01000085
//
LOCUS       NZ_WISB01000000      7177701 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium medicae strain M1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WISB00000000
VERSION     NZ_WISB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766414
            Assembly: GCF_009601285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium medicae (Ensifer medicae)
  ORGANISM  Sinorhizobium medicae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 7177701)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7177701)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WISB00000000.1.
            The Sinorhizobium medicae whole genome shotgun (WGS) project has
            the project accession NZ_WISB00000000.  This version of the project
            (01) has the accession number NZ_WISB01000000, and consists of
            sequences WISB01000001-WISB01000254.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009601285.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:03:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,090
            CDSs (total)                      :: 7,005
            Genes (coding)                    :: 6,609
            CDSs (with protein)               :: 6,609
            Genes (RNA)                       :: 85
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 396
            CDSs (without protein)            :: 396
            Pseudo Genes (ambiguous residues) :: 0 of 396
            Pseudo Genes (frameshifted)       :: 213 of 396
            Pseudo Genes (incomplete)         :: 267 of 396
            Pseudo Genes (internal stop)      :: 45 of 396
            Pseudo Genes (multiple problems)  :: 116 of 396
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7177701
                     /organism="Sinorhizobium medicae"
                     /mol_type="genomic DNA"
                     /strain="M1"
                     /isolation_source="plant root nodules"
                     /host="Medicago orbicularis"
                     /db_xref="taxon:110321"
                     /geo_loc_name="Syria"
WGS         WISB01000001-WISB01000254
WGS_SCAFLD  NZ_WISB01000001-NZ_WISB01000254
//
LOCUS       NZ_WISG01000000      7176562 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium meliloti strain M162, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WISG00000000
VERSION     NZ_WISG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766419
            Assembly: GCF_009601485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium meliloti (Rhizobium meliloti)
  ORGANISM  Sinorhizobium meliloti
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 7176562)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7176562)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WISG00000000.1.
            The Sinorhizobium meliloti whole genome shotgun (WGS) project has
            the project accession NZ_WISG00000000.  This version of the project
            (01) has the accession number NZ_WISG01000000, and consists of
            sequences WISG01000001-WISG01000233.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009601485.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:03:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,021
            CDSs (total)                      :: 6,933
            Genes (coding)                    :: 6,568
            CDSs (with protein)               :: 6,568
            Genes (RNA)                       :: 88
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 365
            CDSs (without protein)            :: 365
            Pseudo Genes (ambiguous residues) :: 0 of 365
            Pseudo Genes (frameshifted)       :: 217 of 365
            Pseudo Genes (incomplete)         :: 231 of 365
            Pseudo Genes (internal stop)      :: 37 of 365
            Pseudo Genes (multiple problems)  :: 106 of 365
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7176562
                     /organism="Sinorhizobium meliloti"
                     /mol_type="genomic DNA"
                     /strain="M162"
                     /isolation_source="plant root nodules"
                     /host="Medicago truncatula"
                     /db_xref="taxon:382"
                     /geo_loc_name="Syria"
WGS         WISG01000001-WISG01000233
WGS_SCAFLD  NZ_WISG01000001-NZ_WISG01000233
//
LOCUS       NZ_JAACLP010000000   5264776 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Serratia marcescens strain SER_525, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAACLP000000000
VERSION     NZ_JAACLP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13897187
            Assembly: GCF_009938955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Serratia marcescens
  ORGANISM  Serratia marcescens
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (bases 1 to 5264776)
  AUTHORS   Iovleva,A.V., Doi,Y., Jimenez,A. and Abbo,L.M.
  TITLE     Outbreak of KPC-3-producing Serratia marcescens in South Florida
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5264776)
  AUTHORS   Iovleva,A.V., Doi,Y., Jimenez,A. and Abbo,L.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JAN-2020) Medicine/Infectious Diseases, University of
            Pittsburgh, Scaife Hall, Suite 829 3550 Terrace Street, Pittsburgh,
            PA 15213, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAACLP000000000.1.
            The Serratia marcescens whole genome shotgun (WGS) project has the
            project accession NZ_JAACLP000000000.  This version of the project
            (01) has the accession number NZ_JAACLP010000000, and consists of
            sequences JAACLP010000001-JAACLP010000044.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. 3.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 342x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009938955.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:02:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,035
            CDSs (total)                      :: 4,926
            Genes (coding)                    :: 4,883
            CDSs (with protein)               :: 4,883
            Genes (RNA)                       :: 109
            rRNAs                             :: 7, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (16S, 23S)
            tRNAs                             :: 80
            ncRNAs                            :: 18
            Pseudo Genes (total)              :: 44
            CDSs (without protein)            :: 43
            Pseudo Genes (ambiguous residues) :: 0 of 44
            Pseudo Genes (frameshifted)       :: 12 of 44
            Pseudo Genes (incomplete)         :: 33 of 44
            Pseudo Genes (internal stop)      :: 3 of 44
            Pseudo Genes (multiple problems)  :: 5 of 44
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5264776
                     /organism="Serratia marcescens"
                     /mol_type="genomic DNA"
                     /strain="SER_525"
                     /isolation_source="sputum"
                     /host="Homo sapiens"
                     /db_xref="taxon:615"
                     /geo_loc_name="USA: Miami"
                     /lat_lon="25.7617 N 80.1918 W"
                     /collection_date="2018"
                     /collected_by="Jackson Memorial Hospital"
WGS         JAACLP010000001-JAACLP010000044
WGS_SCAFLD  NZ_JAACLP010000001-NZ_JAACLP010000044
//
LOCUS       NZ_WIRH01000000      7160828 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium medicae strain A321, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WIRH00000000
VERSION     NZ_WIRH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766392
            Assembly: GCF_009599935.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium medicae (Ensifer medicae)
  ORGANISM  Sinorhizobium medicae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 7160828)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7160828)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WIRH00000000.1.
            The Sinorhizobium medicae whole genome shotgun (WGS) project has
            the project accession NZ_WIRH00000000.  This version of the project
            (01) has the accession number NZ_WIRH01000000, and consists of
            sequences WIRH01000001-WIRH01000221.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009599935.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:47:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,994
            CDSs (total)                      :: 6,915
            Genes (coding)                    :: 6,521
            CDSs (with protein)               :: 6,521
            Genes (RNA)                       :: 79
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 394
            CDSs (without protein)            :: 394
            Pseudo Genes (ambiguous residues) :: 0 of 394
            Pseudo Genes (frameshifted)       :: 254 of 394
            Pseudo Genes (incomplete)         :: 264 of 394
            Pseudo Genes (internal stop)      :: 48 of 394
            Pseudo Genes (multiple problems)  :: 150 of 394
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7160828
                     /organism="Sinorhizobium medicae"
                     /mol_type="genomic DNA"
                     /strain="A321"
                     /isolation_source="plant root nodules"
                     /host="Medicago truncatula"
                     /type_material="type strain of Sinorhizobium medicae"
                     /db_xref="taxon:110321"
                     /geo_loc_name="France"
WGS         WIRH01000001-WIRH01000221
WGS_SCAFLD  NZ_WIRH01000001-NZ_WIRH01000221
//
LOCUS       NZ_JBJMXW010000000   4648035 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Infantis strain
            YZU1484, whole genome shotgun sequencing project.
ACCESSION   NZ_JBJMXW000000000
VERSION     NZ_JBJMXW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45124526
            Assembly: GCF_045809085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Infantis
  ORGANISM  Salmonella enterica subsp. enterica serovar Infantis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4648035)
  AUTHORS   Mang,C.
  TITLE     Salmonella enterica subsp. enterica serovar Infantis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4648035)
  AUTHORS   Mang,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2024) Jiangsu Key Laboratory of Zoonosis,
            Yangzhou University, 48 East Wenhui Road, Yangzhou, Jiangsu 225009,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJMXW000000000.1.
            The Salmonella enterica subsp. enterica serovar Infantis whole
            genome shotgun (WGS) project has the project accession
            NZ_JBJMXW000000000.  This version of the project (01) has the
            accession number NZ_JBJMXW010000000, and consists of sequences
            JBJMXW010000001-JBJMXW010000059.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 20-DEC-2021
            Assembly Method        :: SPAdes v. SPAdes 3.15
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045809085.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:57:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,560
            CDSs (total)                      :: 4,450
            Genes (coding)                    :: 4,333
            CDSs (with protein)               :: 4,333
            Genes (RNA)                       :: 110
            rRNAs                             :: 4, 4, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 4, 3, 7 (5S, 16S, 23S)
            tRNAs                             :: 78
            ncRNAs                            :: 17
            Pseudo Genes (total)              :: 117
            CDSs (without protein)            :: 117
            Pseudo Genes (ambiguous residues) :: 0 of 117
            Pseudo Genes (frameshifted)       :: 48 of 117
            Pseudo Genes (incomplete)         :: 86 of 117
            Pseudo Genes (internal stop)      :: 17 of 117
            Pseudo Genes (multiple problems)  :: 32 of 117
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4648035
                     /organism="Salmonella enterica subsp. enterica serovar
                     Infantis"
                     /mol_type="genomic DNA"
                     /strain="YZU1484"
                     /serovar="Infantis"
                     /isolation_source="egg carton"
                     /sub_species="enterica"
                     /db_xref="taxon:595"
                     /geo_loc_name="China: Nan Tong"
                     /collection_date="2019-09-26"
                     /collected_by="Meng Chuang"
WGS         JBJMXW010000001-JBJMXW010000059
WGS_SCAFLD  NZ_JBJMXW010000001-NZ_JBJMXW010000059
//
LOCUS       NZ_WIRI01000000      6985073 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium meliloti strain HM006-1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WIRI00000000
VERSION     NZ_WIRI00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766393
            Assembly: GCF_009599635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium meliloti (Rhizobium meliloti)
  ORGANISM  Sinorhizobium meliloti
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 6985073)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6985073)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WIRI00000000.1.
            The Sinorhizobium meliloti whole genome shotgun (WGS) project has
            the project accession NZ_WIRI00000000.  This version of the project
            (01) has the accession number NZ_WIRI01000000, and consists of
            sequences WIRI01000001-WIRI01000528.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009599635.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:55:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,823
            CDSs (total)                      :: 6,767
            Genes (coding)                    :: 6,463
            CDSs (with protein)               :: 6,463
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 304
            CDSs (without protein)            :: 304
            Pseudo Genes (ambiguous residues) :: 0 of 304
            Pseudo Genes (frameshifted)       :: 179 of 304
            Pseudo Genes (incomplete)         :: 205 of 304
            Pseudo Genes (internal stop)      :: 23 of 304
            Pseudo Genes (multiple problems)  :: 96 of 304
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6985073
                     /organism="Sinorhizobium meliloti"
                     /mol_type="genomic DNA"
                     /strain="HM006-1"
                     /isolation_source="plant root nodules"
                     /host="Medicago truncatula"
                     /db_xref="taxon:382"
                     /geo_loc_name="France"
WGS         WIRI01000001-WIRI01000528
WGS_SCAFLD  NZ_WIRI01000001-NZ_WIRI01000528
//
LOCUS       NZ_WISA01000000      6878291 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium medicae strain KH53b, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WISA00000000
VERSION     NZ_WISA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766413
            Assembly: GCF_009599855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium medicae (Ensifer medicae)
  ORGANISM  Sinorhizobium medicae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 6878291)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6878291)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WISA00000000.1.
            The Sinorhizobium medicae whole genome shotgun (WGS) project has
            the project accession NZ_WISA00000000.  This version of the project
            (01) has the accession number NZ_WISA01000000, and consists of
            sequences WISA01000001-WISA01000164.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009599855.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:36:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,745
            CDSs (total)                      :: 6,665
            Genes (coding)                    :: 6,304
            CDSs (with protein)               :: 6,304
            Genes (RNA)                       :: 80
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 361
            CDSs (without protein)            :: 361
            Pseudo Genes (ambiguous residues) :: 1 of 361
            Pseudo Genes (frameshifted)       :: 216 of 361
            Pseudo Genes (incomplete)         :: 247 of 361
            Pseudo Genes (internal stop)      :: 40 of 361
            Pseudo Genes (multiple problems)  :: 128 of 361
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6878291
                     /organism="Sinorhizobium medicae"
                     /mol_type="genomic DNA"
                     /strain="KH53b"
                     /isolation_source="plant root nodules"
                     /host="Medicago truncatula"
                     /db_xref="taxon:110321"
                     /geo_loc_name="France"
WGS         WISA01000001-WISA01000164
WGS_SCAFLD  NZ_WISA01000001-NZ_WISA01000164
//
LOCUS       NZ_WISZ01000000      7152016 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium fredii strain USDA205, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WISZ00000000
VERSION     NZ_WISZ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766438
            Assembly: GCF_009601405.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium fredii (Rhizobium fredii)
  ORGANISM  Sinorhizobium fredii
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 7152016)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7152016)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WISZ00000000.1.
            The Sinorhizobium fredii whole genome shotgun (WGS) project has the
            project accession NZ_WISZ00000000.  This version of the project
            (01) has the accession number NZ_WISZ01000000, and consists of
            sequences WISZ01000001-WISZ01000255.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009601405.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:51:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,898
            CDSs (total)                      :: 6,827
            Genes (coding)                    :: 6,469
            CDSs (with protein)               :: 6,469
            Genes (RNA)                       :: 71
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 358
            CDSs (without protein)            :: 358
            Pseudo Genes (ambiguous residues) :: 0 of 358
            Pseudo Genes (frameshifted)       :: 173 of 358
            Pseudo Genes (incomplete)         :: 247 of 358
            Pseudo Genes (internal stop)      :: 29 of 358
            Pseudo Genes (multiple problems)  :: 85 of 358
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7152016
                     /organism="Sinorhizobium fredii"
                     /mol_type="genomic DNA"
                     /strain="USDA205"
                     /isolation_source="plant root nodules"
                     /host="Glycine max"
                     /type_material="type strain of Rhizobium fredii"
                     /db_xref="taxon:380"
                     /geo_loc_name="China"
WGS         WISZ01000001-WISZ01000255
WGS_SCAFLD  NZ_WISZ01000001-NZ_WISZ01000255
//
LOCUS       NZ_WISX01000000      7531728 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium meliloti strain USDA1002, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WISX00000000
VERSION     NZ_WISX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766436
            Assembly: GCF_009601385.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium meliloti (Rhizobium meliloti)
  ORGANISM  Sinorhizobium meliloti
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 7531728)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7531728)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WISX00000000.1.
            The Sinorhizobium meliloti whole genome shotgun (WGS) project has
            the project accession NZ_WISX00000000.  This version of the project
            (01) has the accession number NZ_WISX01000000, and consists of
            sequences WISX01000001-WISX01000359.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009601385.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:06:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,491
            CDSs (total)                      :: 7,429
            Genes (coding)                    :: 7,013
            CDSs (with protein)               :: 7,013
            Genes (RNA)                       :: 62
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 416
            CDSs (without protein)            :: 416
            Pseudo Genes (ambiguous residues) :: 0 of 416
            Pseudo Genes (frameshifted)       :: 225 of 416
            Pseudo Genes (incomplete)         :: 268 of 416
            Pseudo Genes (internal stop)      :: 30 of 416
            Pseudo Genes (multiple problems)  :: 98 of 416
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7531728
                     /organism="Sinorhizobium meliloti"
                     /mol_type="genomic DNA"
                     /strain="USDA1002"
                     /isolation_source="plant root nodules"
                     /host="Medicago sativa"
                     /type_material="type strain of Rhizobium meliloti"
                     /db_xref="taxon:382"
                     /geo_loc_name="USA"
WGS         WISX01000001-WISX01000359
WGS_SCAFLD  NZ_WISX01000001-NZ_WISX01000359
//
LOCUS       NZ_WISQ01000000      7002589 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium medicae strain M58, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WISQ00000000
VERSION     NZ_WISQ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766429
            Assembly: GCF_009599705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium medicae (Ensifer medicae)
  ORGANISM  Sinorhizobium medicae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 7002589)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7002589)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WISQ00000000.1.
            The Sinorhizobium medicae whole genome shotgun (WGS) project has
            the project accession NZ_WISQ00000000.  This version of the project
            (01) has the accession number NZ_WISQ01000000, and consists of
            sequences WISQ01000001-WISQ01000162.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009599705.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:05:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,905
            CDSs (total)                      :: 6,819
            Genes (coding)                    :: 6,428
            CDSs (with protein)               :: 6,428
            Genes (RNA)                       :: 86
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 391
            CDSs (without protein)            :: 391
            Pseudo Genes (ambiguous residues) :: 0 of 391
            Pseudo Genes (frameshifted)       :: 230 of 391
            Pseudo Genes (incomplete)         :: 251 of 391
            Pseudo Genes (internal stop)      :: 40 of 391
            Pseudo Genes (multiple problems)  :: 112 of 391
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7002589
                     /organism="Sinorhizobium medicae"
                     /mol_type="genomic DNA"
                     /strain="M58"
                     /isolation_source="plant root nodules"
                     /host="Medicago rotata"
                     /db_xref="taxon:110321"
                     /geo_loc_name="Jordan"
WGS         WISQ01000001-WISQ01000162
WGS_SCAFLD  NZ_WISQ01000001-NZ_WISQ01000162
//
LOCUS       NZ_WISY01000000      7540803 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium meliloti strain USDA1021, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WISY00000000
VERSION     NZ_WISY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766437
            Assembly: GCF_009601435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium meliloti (Rhizobium meliloti)
  ORGANISM  Sinorhizobium meliloti
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 7540803)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7540803)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WISY00000000.1.
            The Sinorhizobium meliloti whole genome shotgun (WGS) project has
            the project accession NZ_WISY00000000.  This version of the project
            (01) has the accession number NZ_WISY01000000, and consists of
            sequences WISY01000001-WISY01000254.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009601435.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:40:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,461
            CDSs (total)                      :: 7,380
            Genes (coding)                    :: 6,947
            CDSs (with protein)               :: 6,947
            Genes (RNA)                       :: 81
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 433
            CDSs (without protein)            :: 433
            Pseudo Genes (ambiguous residues) :: 0 of 433
            Pseudo Genes (frameshifted)       :: 228 of 433
            Pseudo Genes (incomplete)         :: 278 of 433
            Pseudo Genes (internal stop)      :: 30 of 433
            Pseudo Genes (multiple problems)  :: 92 of 433
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7540803
                     /organism="Sinorhizobium meliloti"
                     /mol_type="genomic DNA"
                     /strain="USDA1021"
                     /isolation_source="plant root nodules"
                     /host="Medicago sativa"
                     /db_xref="taxon:382"
                     /geo_loc_name="USA"
WGS         WISY01000001-WISY01000254
WGS_SCAFLD  NZ_WISY01000001-NZ_WISY01000254
//
LOCUS       NZ_WIRY01000000      6854597 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium meliloti strain KH48e, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WIRY00000000
VERSION     NZ_WIRY00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766411
            Assembly: GCF_009599945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium meliloti (Rhizobium meliloti)
  ORGANISM  Sinorhizobium meliloti
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 6854597)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6854597)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WIRY00000000.1.
            The Sinorhizobium meliloti whole genome shotgun (WGS) project has
            the project accession NZ_WIRY00000000.  This version of the project
            (01) has the accession number NZ_WIRY01000000, and consists of
            sequences WIRY01000001-WIRY01000205.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009599945.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:54:15
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,553
            CDSs (total)                      :: 6,483
            Genes (coding)                    :: 6,273
            CDSs (with protein)               :: 6,273
            Genes (RNA)                       :: 70
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 210
            CDSs (without protein)            :: 210
            Pseudo Genes (ambiguous residues) :: 0 of 210
            Pseudo Genes (frameshifted)       :: 121 of 210
            Pseudo Genes (incomplete)         :: 135 of 210
            Pseudo Genes (internal stop)      :: 24 of 210
            Pseudo Genes (multiple problems)  :: 60 of 210
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6854597
                     /organism="Sinorhizobium meliloti"
                     /mol_type="genomic DNA"
                     /strain="KH48e"
                     /isolation_source="plant root nodules"
                     /host="Medicago truncatula"
                     /db_xref="taxon:382"
                     /geo_loc_name="France"
WGS         WIRY01000001-WIRY01000205
WGS_SCAFLD  NZ_WIRY01000001-NZ_WIRY01000205
//
LOCUS       NZ_JBWBUB010000000   4096942 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Shewanella sp. QJM3NY_23, whole genome shotgun sequencing project.
ACCESSION   NZ_JBWBUB000000000
VERSION     NZ_JBWBUB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449780
            Assembly: GCF_056173105.1
KEYWORDS    WGS; RefSeq.
SOURCE      Shewanella sp. QJM3NY_23
  ORGANISM  Shewanella sp. QJM3NY_23
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Alteromonadales; Shewanellaceae; Shewanella.
REFERENCE   1  (bases 1 to 4096942)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4096942)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBUB000000000.1.
            The Shewanella sp. QJM3NY_23 whole genome shotgun (WGS) project has
            the project accession NZ_JBWBUB000000000.  This version of the
            project (01) has the accession number NZ_JBWBUB010000000, and
            consists of sequences JBWBUB010000001-JBWBUB010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 347.2x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173105.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:43:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,627
            CDSs (total)                      :: 3,495
            Genes (coding)                    :: 3,427
            CDSs (with protein)               :: 3,427
            Genes (RNA)                       :: 132
            rRNAs                             :: 10, 9, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 10, 9, 9 (5S, 16S, 23S)
            tRNAs                             :: 99
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 68
            CDSs (without protein)            :: 68
            Pseudo Genes (ambiguous residues) :: 0 of 68
            Pseudo Genes (frameshifted)       :: 22 of 68
            Pseudo Genes (incomplete)         :: 34 of 68
            Pseudo Genes (internal stop)      :: 22 of 68
            Pseudo Genes (multiple problems)  :: 10 of 68
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4096942
                     /organism="Shewanella sp. QJM3NY_23"
                     /mol_type="genomic DNA"
                     /strain="QJM3NY_23"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569839"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBUB010000001-JBWBUB010000002
WGS_SCAFLD  NZ_CM149657
WGS_SCAFLD  NZ_JBWBUB010000002
//
LOCUS       NZ_WIRK01000000      7252554 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium meliloti strain HM007-12, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WIRK00000000
VERSION     NZ_WIRK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766396
            Assembly: GCF_009599605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium meliloti (Rhizobium meliloti)
  ORGANISM  Sinorhizobium meliloti
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 7252554)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7252554)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WIRK00000000.1.
            The Sinorhizobium meliloti whole genome shotgun (WGS) project has
            the project accession NZ_WIRK00000000.  This version of the project
            (01) has the accession number NZ_WIRK01000000, and consists of
            sequences WIRK01000001-WIRK01000156.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009599605.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:52:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,001
            CDSs (total)                      :: 6,916
            Genes (coding)                    :: 6,599
            CDSs (with protein)               :: 6,599
            Genes (RNA)                       :: 85
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 317
            CDSs (without protein)            :: 317
            Pseudo Genes (ambiguous residues) :: 0 of 317
            Pseudo Genes (frameshifted)       :: 189 of 317
            Pseudo Genes (incomplete)         :: 209 of 317
            Pseudo Genes (internal stop)      :: 26 of 317
            Pseudo Genes (multiple problems)  :: 99 of 317
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7252554
                     /organism="Sinorhizobium meliloti"
                     /mol_type="genomic DNA"
                     /strain="HM007-12"
                     /isolation_source="plant root nodules"
                     /host="Medicago truncatula"
                     /db_xref="taxon:382"
                     /geo_loc_name="France"
WGS         WIRK01000001-WIRK01000156
WGS_SCAFLD  NZ_WIRK01000001-NZ_WIRK01000156
//
LOCUS       NZ_WISI01000000      7150355 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium medicae strain M2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WISI00000000
VERSION     NZ_WISI00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766421
            Assembly: GCF_009601305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium medicae (Ensifer medicae)
  ORGANISM  Sinorhizobium medicae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 7150355)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7150355)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WISI00000000.1.
            The Sinorhizobium medicae whole genome shotgun (WGS) project has
            the project accession NZ_WISI00000000.  This version of the project
            (01) has the accession number NZ_WISI01000000, and consists of
            sequences WISI01000001-WISI01000242.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009601305.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:56:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,077
            CDSs (total)                      :: 6,992
            Genes (coding)                    :: 6,587
            CDSs (with protein)               :: 6,587
            Genes (RNA)                       :: 85
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 405
            CDSs (without protein)            :: 405
            Pseudo Genes (ambiguous residues) :: 1 of 405
            Pseudo Genes (frameshifted)       :: 214 of 405
            Pseudo Genes (incomplete)         :: 275 of 405
            Pseudo Genes (internal stop)      :: 45 of 405
            Pseudo Genes (multiple problems)  :: 117 of 405
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7150355
                     /organism="Sinorhizobium medicae"
                     /mol_type="genomic DNA"
                     /strain="M2"
                     /isolation_source="plant root nodules"
                     /host="Medicago blancheana"
                     /db_xref="taxon:110321"
                     /geo_loc_name="Syria"
WGS         WISI01000001-WISI01000242
WGS_SCAFLD  NZ_WISI01000001-NZ_WISI01000242
//
LOCUS       NZ_JBJMXT010000000   4647366 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Infantis strain
            YZU1481, whole genome shotgun sequencing project.
ACCESSION   NZ_JBJMXT000000000
VERSION     NZ_JBJMXT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45124523
            Assembly: GCF_045808935.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Infantis
  ORGANISM  Salmonella enterica subsp. enterica serovar Infantis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4647366)
  AUTHORS   Mang,C.
  TITLE     Salmonella enterica subsp. enterica serovar Infantis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4647366)
  AUTHORS   Mang,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2024) Jiangsu Key Laboratory of Zoonosis,
            Yangzhou University, 48 East Wenhui Road, Yangzhou, Jiangsu 225009,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJMXT000000000.1.
            The Salmonella enterica subsp. enterica serovar Infantis whole
            genome shotgun (WGS) project has the project accession
            NZ_JBJMXT000000000.  This version of the project (01) has the
            accession number NZ_JBJMXT010000000, and consists of sequences
            JBJMXT010000001-JBJMXT010000061.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 20-DEC-2021
            Assembly Method        :: SPAdes v. SPAdes 3.15
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045808935.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:52:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,556
            CDSs (total)                      :: 4,451
            Genes (coding)                    :: 4,334
            CDSs (with protein)               :: 4,334
            Genes (RNA)                       :: 105
            rRNAs                             :: 4, 3, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 4, 2, 6 (5S, 16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 18
            Pseudo Genes (total)              :: 117
            CDSs (without protein)            :: 117
            Pseudo Genes (ambiguous residues) :: 0 of 117
            Pseudo Genes (frameshifted)       :: 48 of 117
            Pseudo Genes (incomplete)         :: 86 of 117
            Pseudo Genes (internal stop)      :: 17 of 117
            Pseudo Genes (multiple problems)  :: 32 of 117
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4647366
                     /organism="Salmonella enterica subsp. enterica serovar
                     Infantis"
                     /mol_type="genomic DNA"
                     /strain="YZU1481"
                     /serovar="Infantis"
                     /isolation_source="egg carton"
                     /sub_species="enterica"
                     /db_xref="taxon:595"
                     /geo_loc_name="China: Nan Tong"
                     /collection_date="2019-09-26"
                     /collected_by="Meng Chuang"
WGS         JBJMXT010000001-JBJMXT010000061
WGS_SCAFLD  NZ_JBJMXT010000001-NZ_JBJMXT010000061
//
LOCUS       NZ_VITC01000000      6410087 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium medicae strain M26-2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VITC00000000
VERSION     NZ_VITC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN11512016
            Assembly: GCF_007827735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium medicae (Ensifer medicae)
  ORGANISM  Sinorhizobium medicae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 6410087)
  AUTHORS   Whitman,W.
  TITLE     Genomic Encyclopedia of Type Strains, Phase IV (KMG-V): Genome
            sequencing to study the core and pangenomes of soil and
            plant-associated prokaryotes
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 6410087)
  AUTHORS   Whitman,W., Huntemann,M., Clum,A., Pillay,M., Palaniappan,K.,
            Varghese,N., Mikhailova,N., Stamatis,D., Reddy,T., Daum,C.,
            Shapiro,N., Ivanova,N., Kyrpides,N. and Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JUN-2019) Prokaryotic Super Group, DOE Joint Genome
            Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VITC00000000.1.
            The Sinorhizobium medicae whole genome shotgun (WGS) project has
            the project accession NZ_VITC00000000.  This version of the project
            (01) has the accession number NZ_VITC01000000, and consists of
            sequences VITC01000001-VITC01000055.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.12.0
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 234.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_007827735.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:42:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,097
            CDSs (total)                      :: 6,041
            Genes (coding)                    :: 5,816
            CDSs (with protein)               :: 5,816
            Genes (RNA)                       :: 56
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 225
            CDSs (without protein)            :: 225
            Pseudo Genes (ambiguous residues) :: 0 of 225
            Pseudo Genes (frameshifted)       :: 140 of 225
            Pseudo Genes (incomplete)         :: 153 of 225
            Pseudo Genes (internal stop)      :: 26 of 225
            Pseudo Genes (multiple problems)  :: 80 of 225
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6410087
                     /organism="Sinorhizobium medicae"
                     /mol_type="genomic DNA"
                     /strain="M26-2"
                     /db_xref="taxon:110321"
WGS         VITC01000001-VITC01000055
WGS_SCAFLD  NZ_VITC01000001-NZ_VITC01000055
//
LOCUS       NZ_WISC01000000      6907039 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium meliloti strain M10, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WISC00000000
VERSION     NZ_WISC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766415
            Assembly: GCF_009601325.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium meliloti (Rhizobium meliloti)
  ORGANISM  Sinorhizobium meliloti
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 6907039)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6907039)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WISC00000000.1.
            The Sinorhizobium meliloti whole genome shotgun (WGS) project has
            the project accession NZ_WISC00000000.  This version of the project
            (01) has the accession number NZ_WISC01000000, and consists of
            sequences WISC01000001-WISC01000231.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009601325.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:53:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,704
            CDSs (total)                      :: 6,620
            Genes (coding)                    :: 6,340
            CDSs (with protein)               :: 6,340
            Genes (RNA)                       :: 84
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 280
            CDSs (without protein)            :: 280
            Pseudo Genes (ambiguous residues) :: 1 of 280
            Pseudo Genes (frameshifted)       :: 158 of 280
            Pseudo Genes (incomplete)         :: 192 of 280
            Pseudo Genes (internal stop)      :: 23 of 280
            Pseudo Genes (multiple problems)  :: 88 of 280
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6907039
                     /organism="Sinorhizobium meliloti"
                     /mol_type="genomic DNA"
                     /strain="M10"
                     /isolation_source="plant root nodules"
                     /host="Medicago blancheana"
                     /db_xref="taxon:382"
                     /geo_loc_name="Syria"
WGS         WISC01000001-WISC01000231
WGS_SCAFLD  NZ_WISC01000001-NZ_WISC01000231
//
LOCUS       NZ_WISH01000000      7157850 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium meliloti strain M195, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WISH00000000
VERSION     NZ_WISH00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766420
            Assembly: GCF_009601525.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium meliloti (Rhizobium meliloti)
  ORGANISM  Sinorhizobium meliloti
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 7157850)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7157850)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WISH00000000.1.
            The Sinorhizobium meliloti whole genome shotgun (WGS) project has
            the project accession NZ_WISH00000000.  This version of the project
            (01) has the accession number NZ_WISH01000000, and consists of
            sequences WISH01000001-WISH01000162.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009601525.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:05:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,945
            CDSs (total)                      :: 6,862
            Genes (coding)                    :: 6,586
            CDSs (with protein)               :: 6,586
            Genes (RNA)                       :: 83
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 276
            CDSs (without protein)            :: 276
            Pseudo Genes (ambiguous residues) :: 0 of 276
            Pseudo Genes (frameshifted)       :: 150 of 276
            Pseudo Genes (incomplete)         :: 179 of 276
            Pseudo Genes (internal stop)      :: 32 of 276
            Pseudo Genes (multiple problems)  :: 76 of 276
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7157850
                     /organism="Sinorhizobium meliloti"
                     /mol_type="genomic DNA"
                     /strain="M195"
                     /isolation_source="plant root nodules"
                     /host="Medicago rigidula"
                     /db_xref="taxon:382"
                     /geo_loc_name="Turkey"
WGS         WISH01000001-WISH01000162
WGS_SCAFLD  NZ_WISH01000001-NZ_WISH01000162
//
LOCUS       NZ_CDVEAQ010000000   4959970 bp    DNA     linear   ENV 27-MAR-2026
DEFINITION  MAG: Salipiger bermudensis isolate MarMAG_005448, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVEAQ000000000
VERSION     NZ_CDVEAQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737378
            Assembly: GCF_977660635.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Salipiger bermudensis (marine metagenome)
  ORGANISM  Salipiger bermudensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (bases 1 to 4959970)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVEAQ000000000.1.
            The Salipiger bermudensis whole genome shotgun (WGS) project has
            the project accession NZ_CDVEAQ000000000.  This version of the
            project (01) has the accession number NZ_CDVEAQ010000000, and
            consists of sequences CDVEAQ010000001-CDVEAQ010000126.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977660635.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:35:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,799
            CDSs (total)                      :: 4,759
            Genes (coding)                    :: 4,715
            CDSs (with protein)               :: 4,715
            Genes (RNA)                       :: 40
            tRNAs                             :: 37
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 44
            CDSs (without protein)            :: 44
            Pseudo Genes (ambiguous residues) :: 0 of 44
            Pseudo Genes (frameshifted)       :: 10 of 44
            Pseudo Genes (incomplete)         :: 37 of 44
            Pseudo Genes (internal stop)      :: 6 of 44
            Pseudo Genes (multiple problems)  :: 7 of 44
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4959970
                     /organism="Salipiger bermudensis"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_005448"
                     /isolation_source="Mariana Trench, free-living
                     microorganism in surface water"
                     /db_xref="taxon:344736"
                     /environmental_sample
                     /geo_loc_name="Pacific Ocean"
                     /collection_date="2016-09-15"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVEAQ010000001-CDVEAQ010000126
WGS_SCAFLD  NZ_CDVEAQ010000001-NZ_CDVEAQ010000126
//
LOCUS       NZ_WIRR01000000      7095995 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium meliloti strain KH35b, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WIRR00000000
VERSION     NZ_WIRR00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766404
            Assembly: GCF_009599725.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium meliloti (Rhizobium meliloti)
  ORGANISM  Sinorhizobium meliloti
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 7095995)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7095995)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WIRR00000000.1.
            The Sinorhizobium meliloti whole genome shotgun (WGS) project has
            the project accession NZ_WIRR00000000.  This version of the project
            (01) has the accession number NZ_WIRR01000000, and consists of
            sequences WIRR01000001-WIRR01000150.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009599725.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:50:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,755
            CDSs (total)                      :: 6,672
            Genes (coding)                    :: 6,421
            CDSs (with protein)               :: 6,421
            Genes (RNA)                       :: 83
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 251
            CDSs (without protein)            :: 251
            Pseudo Genes (ambiguous residues) :: 1 of 251
            Pseudo Genes (frameshifted)       :: 163 of 251
            Pseudo Genes (incomplete)         :: 144 of 251
            Pseudo Genes (internal stop)      :: 31 of 251
            Pseudo Genes (multiple problems)  :: 82 of 251
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7095995
                     /organism="Sinorhizobium meliloti"
                     /mol_type="genomic DNA"
                     /strain="KH35b"
                     /isolation_source="plant root nodules"
                     /host="Medicago truncatula"
                     /db_xref="taxon:382"
                     /geo_loc_name="France"
WGS         WIRR01000001-WIRR01000150
WGS_SCAFLD  NZ_WIRR01000001-NZ_WIRR01000150
//
LOCUS       NZ_QXNK01000000      2361479 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Rodentibacter pneumotropicus strain FD987, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QXNK00000000
VERSION     NZ_QXNK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09984076
            Assembly: GCF_004795405.1
KEYWORDS    WGS; RefSeq.
SOURCE      Rodentibacter pneumotropicus
  ORGANISM  Rodentibacter pneumotropicus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Rodentibacter.
REFERENCE   1  (bases 1 to 2361479)
  AUTHORS   Adhikary,S., Bisgaard,M., Boot,R., Benga,L., Nicklas,W. and
            Christensen,H.
  TITLE     Development of multi locus sequence typing (MLST) of Rodentibacter
            pneumotropicus
  JOURNAL   Vet Microbiol 231, 11-17 (2019)
   PUBMED   30955797
REFERENCE   2  (bases 1 to 2361479)
  AUTHORS   Christensen,H., Benga,L. and Adhikary,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2018) Veterinary Animal Sciences, University of
            Copenhagen, Stigbojlen 4, Frederiksberg, MI 1870 C, Denmark
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QXNK00000000.1.
            The Rodentibacter pneumotropicus whole genome shotgun (WGS) project
            has the project accession NZ_QXNK00000000.  This version of the
            project (01) has the accession number NZ_QXNK01000000, and consists
            of sequences QXNK01000001-QXNK01000121.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 63.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004795405.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:50:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,340
            CDSs (total)                      :: 2,288
            Genes (coding)                    :: 2,216
            CDSs (with protein)               :: 2,216
            Genes (RNA)                       :: 52
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 23S)
            partial rRNAs                     :: 3 (16S)
            tRNAs                             :: 43
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 72
            CDSs (without protein)            :: 72
            Pseudo Genes (ambiguous residues) :: 0 of 72
            Pseudo Genes (frameshifted)       :: 23 of 72
            Pseudo Genes (incomplete)         :: 57 of 72
            Pseudo Genes (internal stop)      :: 5 of 72
            Pseudo Genes (multiple problems)  :: 11 of 72
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2361479
                     /organism="Rodentibacter pneumotropicus"
                     /mol_type="genomic DNA"
                     /strain="FD987"
                     /host="rat"
                     /db_xref="taxon:758"
                     /geo_loc_name="Australia"
                     /collection_date="1987"
WGS         QXNK01000001-QXNK01000121
WGS_SCAFLD  NZ_QXNK01000001-NZ_QXNK01000121
//
LOCUS       NZ_WISN01000000      7235903 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium meliloti strain M268, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WISN00000000
VERSION     NZ_WISN00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766426
            Assembly: GCF_009601115.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium meliloti (Rhizobium meliloti)
  ORGANISM  Sinorhizobium meliloti
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 7235903)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7235903)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WISN00000000.1.
            The Sinorhizobium meliloti whole genome shotgun (WGS) project has
            the project accession NZ_WISN00000000.  This version of the project
            (01) has the accession number NZ_WISN01000000, and consists of
            sequences WISN01000001-WISN01000339.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009601115.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:59:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,020
            CDSs (total)                      :: 6,944
            Genes (coding)                    :: 6,511
            CDSs (with protein)               :: 6,511
            Genes (RNA)                       :: 76
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 57
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 433
            CDSs (without protein)            :: 433
            Pseudo Genes (ambiguous residues) :: 1 of 433
            Pseudo Genes (frameshifted)       :: 254 of 433
            Pseudo Genes (incomplete)         :: 282 of 433
            Pseudo Genes (internal stop)      :: 37 of 433
            Pseudo Genes (multiple problems)  :: 131 of 433
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7235903
                     /organism="Sinorhizobium meliloti"
                     /mol_type="genomic DNA"
                     /strain="M268"
                     /isolation_source="plant root nodules"
                     /host="Medicago orbicularis"
                     /db_xref="taxon:382"
                     /geo_loc_name="Jordan"
WGS         WISN01000001-WISN01000339
WGS_SCAFLD  NZ_WISN01000001-NZ_WISN01000339
//
LOCUS       NZ_WIRM01000000      6962958 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium meliloti strain HM013-1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WIRM00000000
VERSION     NZ_WIRM00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766399
            Assembly: GCF_009599645.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium meliloti (Rhizobium meliloti)
  ORGANISM  Sinorhizobium meliloti
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 6962958)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6962958)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WIRM00000000.1.
            The Sinorhizobium meliloti whole genome shotgun (WGS) project has
            the project accession NZ_WIRM00000000.  This version of the project
            (01) has the accession number NZ_WIRM01000000, and consists of
            sequences WIRM01000001-WIRM01000168.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009599645.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:51:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,703
            CDSs (total)                      :: 6,621
            Genes (coding)                    :: 6,340
            CDSs (with protein)               :: 6,340
            Genes (RNA)                       :: 82
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 281
            CDSs (without protein)            :: 281
            Pseudo Genes (ambiguous residues) :: 0 of 281
            Pseudo Genes (frameshifted)       :: 161 of 281
            Pseudo Genes (incomplete)         :: 185 of 281
            Pseudo Genes (internal stop)      :: 22 of 281
            Pseudo Genes (multiple problems)  :: 83 of 281
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6962958
                     /organism="Sinorhizobium meliloti"
                     /mol_type="genomic DNA"
                     /strain="HM013-1"
                     /isolation_source="plant root nodules"
                     /host="Medicago truncatula"
                     /db_xref="taxon:382"
                     /geo_loc_name="France"
WGS         WIRM01000001-WIRM01000168
WGS_SCAFLD  NZ_WIRM01000001-NZ_WIRM01000168
//
LOCUS       NZ_CDVDFX010000000   4196115 bp    DNA     linear   ENV 27-MAR-2026
DEFINITION  MAG: Roseivivax marinus isolate MarMAG_114186, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CDVDFX000000000
VERSION     NZ_CDVDFX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737307
            Assembly: GCF_977655225.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Roseivivax marinus (marine metagenome)
  ORGANISM  Roseivivax marinus
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Roseivivax.
REFERENCE   1  (bases 1 to 4196115)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVDFX000000000.1.
            The Roseivivax marinus whole genome shotgun (WGS) project has the
            project accession NZ_CDVDFX000000000.  This version of the project
            (01) has the accession number NZ_CDVDFX010000000, and consists of
            sequences CDVDFX010000001-CDVDFX010000087.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977655225.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:34:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,987
            CDSs (total)                      :: 3,947
            Genes (coding)                    :: 3,902
            CDSs (with protein)               :: 3,902
            Genes (RNA)                       :: 40
            tRNAs                             :: 38
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 45
            CDSs (without protein)            :: 45
            Pseudo Genes (ambiguous residues) :: 0 of 45
            Pseudo Genes (frameshifted)       :: 5 of 45
            Pseudo Genes (incomplete)         :: 40 of 45
            Pseudo Genes (internal stop)      :: 5 of 45
            Pseudo Genes (multiple problems)  :: 4 of 45
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4196115
                     /organism="Roseivivax marinus"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_114186"
                     /isolation_source="Mariana Trench, particle-associated
                     microorganism abyssal water (4,000 m)"
                     /db_xref="taxon:1379903"
                     /environmental_sample
                     /geo_loc_name="Pacific Ocean"
                     /collection_date="2016-09-15"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVDFX010000001-CDVDFX010000087
WGS_SCAFLD  NZ_CDVDFX010000001-NZ_CDVDFX010000087
//
LOCUS       NZ_WIRV01000000      6925272 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium medicae strain KH36d, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WIRV00000000
VERSION     NZ_WIRV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766408
            Assembly: GCF_009599825.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium medicae (Ensifer medicae)
  ORGANISM  Sinorhizobium medicae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 6925272)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6925272)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WIRV00000000.1.
            The Sinorhizobium medicae whole genome shotgun (WGS) project has
            the project accession NZ_WIRV00000000.  This version of the project
            (01) has the accession number NZ_WIRV01000000, and consists of
            sequences WIRV01000001-WIRV01000182.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009599825.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:48:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,756
            CDSs (total)                      :: 6,680
            Genes (coding)                    :: 6,333
            CDSs (with protein)               :: 6,333
            Genes (RNA)                       :: 76
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 347
            CDSs (without protein)            :: 347
            Pseudo Genes (ambiguous residues) :: 0 of 347
            Pseudo Genes (frameshifted)       :: 212 of 347
            Pseudo Genes (incomplete)         :: 216 of 347
            Pseudo Genes (internal stop)      :: 39 of 347
            Pseudo Genes (multiple problems)  :: 106 of 347
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6925272
                     /organism="Sinorhizobium medicae"
                     /mol_type="genomic DNA"
                     /strain="KH36d"
                     /isolation_source="plant root nodules"
                     /host="Medicago truncatula"
                     /db_xref="taxon:110321"
                     /geo_loc_name="France"
WGS         WIRV01000001-WIRV01000182
WGS_SCAFLD  NZ_WIRV01000001-NZ_WIRV01000182
//
LOCUS       NZ_QXNJ01000000      2269789 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Rodentibacter pneumotropicus strain 691_11, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QXNJ00000000
VERSION     NZ_QXNJ00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09983961
            Assembly: GCF_004795385.1
KEYWORDS    WGS; RefSeq.
SOURCE      Rodentibacter pneumotropicus
  ORGANISM  Rodentibacter pneumotropicus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Rodentibacter.
REFERENCE   1  (bases 1 to 2269789)
  AUTHORS   Adhikary,S., Bisgaard,M., Boot,R., Benga,L., Nicklas,W. and
            Christensen,H.
  TITLE     Development of multi locus sequence typing (MLST) of Rodentibacter
            pneumotropicus
  JOURNAL   Vet Microbiol 231, 11-17 (2019)
   PUBMED   30955797
REFERENCE   2  (bases 1 to 2269789)
  AUTHORS   Christensen,H., Benga,L. and Adhikary,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2018) Veterinary Animal Sciences, University of
            Copenhagen, Stigbojlen 4, Frederiksberg, MI 1870 C, Denmark
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QXNJ00000000.1.
            The Rodentibacter pneumotropicus whole genome shotgun (WGS) project
            has the project accession NZ_QXNJ00000000.  This version of the
            project (01) has the accession number NZ_QXNJ01000000, and consists
            of sequences QXNJ01000001-QXNJ01000097.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 46.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004795385.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:32:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,176
            CDSs (total)                      :: 2,124
            Genes (coding)                    :: 2,060
            CDSs (with protein)               :: 2,060
            Genes (RNA)                       :: 52
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 23 of 64
            Pseudo Genes (incomplete)         :: 43 of 64
            Pseudo Genes (internal stop)      :: 13 of 64
            Pseudo Genes (multiple problems)  :: 14 of 64
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2269789
                     /organism="Rodentibacter pneumotropicus"
                     /mol_type="genomic DNA"
                     /strain="691_11"
                     /host="mouse"
                     /db_xref="taxon:758"
                     /geo_loc_name="Germany"
                     /collection_date="2011"
WGS         QXNJ01000001-QXNJ01000097
WGS_SCAFLD  NZ_QXNJ01000001-NZ_QXNJ01000097
//
LOCUS       NZ_JBJMXQ010000000   4647706 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Infantis strain
            YZU1478, whole genome shotgun sequencing project.
ACCESSION   NZ_JBJMXQ000000000
VERSION     NZ_JBJMXQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45124520
            Assembly: GCF_045808905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Infantis
  ORGANISM  Salmonella enterica subsp. enterica serovar Infantis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4647706)
  AUTHORS   Mang,C.
  TITLE     Salmonella enterica subsp. enterica serovar Infantis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4647706)
  AUTHORS   Mang,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2024) Jiangsu Key Laboratory of Zoonosis,
            Yangzhou University, 48 East Wenhui Road, Yangzhou, Jiangsu 225009,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJMXQ000000000.1.
            The Salmonella enterica subsp. enterica serovar Infantis whole
            genome shotgun (WGS) project has the project accession
            NZ_JBJMXQ000000000.  This version of the project (01) has the
            accession number NZ_JBJMXQ010000000, and consists of sequences
            JBJMXQ010000001-JBJMXQ010000060.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 20-DEC-2021
            Assembly Method        :: SPAdes v. SPAdes 3.15
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045808905.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:48:57
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,561
            CDSs (total)                      :: 4,456
            Genes (coding)                    :: 4,337
            CDSs (with protein)               :: 4,337
            Genes (RNA)                       :: 105
            rRNAs                             :: 4, 3, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 4, 2, 6 (5S, 16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 17
            Pseudo Genes (total)              :: 119
            CDSs (without protein)            :: 119
            Pseudo Genes (ambiguous residues) :: 0 of 119
            Pseudo Genes (frameshifted)       :: 48 of 119
            Pseudo Genes (incomplete)         :: 89 of 119
            Pseudo Genes (internal stop)      :: 17 of 119
            Pseudo Genes (multiple problems)  :: 32 of 119
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4647706
                     /organism="Salmonella enterica subsp. enterica serovar
                     Infantis"
                     /mol_type="genomic DNA"
                     /strain="YZU1478"
                     /serovar="Infantis"
                     /isolation_source="egg shell"
                     /host="animal"
                     /sub_species="enterica"
                     /db_xref="taxon:595"
                     /geo_loc_name="China: Nan Tong"
                     /collection_date="2019-08-20"
                     /collected_by="Meng Chuang"
WGS         JBJMXQ010000001-JBJMXQ010000060
WGS_SCAFLD  NZ_JBJMXQ010000001-NZ_JBJMXQ010000060
//
LOCUS       NZ_WIRX01000000      7058082 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium meliloti strain KH46c, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WIRX00000000
VERSION     NZ_WIRX00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766410
            Assembly: GCF_009599925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium meliloti (Rhizobium meliloti)
  ORGANISM  Sinorhizobium meliloti
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 7058082)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7058082)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WIRX00000000.1.
            The Sinorhizobium meliloti whole genome shotgun (WGS) project has
            the project accession NZ_WIRX00000000.  This version of the project
            (01) has the accession number NZ_WIRX01000000, and consists of
            sequences WIRX01000001-WIRX01000251.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009599925.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:01:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,893
            CDSs (total)                      :: 6,816
            Genes (coding)                    :: 6,501
            CDSs (with protein)               :: 6,501
            Genes (RNA)                       :: 77
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 315
            CDSs (without protein)            :: 315
            Pseudo Genes (ambiguous residues) :: 0 of 315
            Pseudo Genes (frameshifted)       :: 177 of 315
            Pseudo Genes (incomplete)         :: 214 of 315
            Pseudo Genes (internal stop)      :: 32 of 315
            Pseudo Genes (multiple problems)  :: 98 of 315
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7058082
                     /organism="Sinorhizobium meliloti"
                     /mol_type="genomic DNA"
                     /strain="KH46c"
                     /isolation_source="plant root nodules"
                     /host="Medicago truncatula"
                     /db_xref="taxon:382"
                     /geo_loc_name="France"
WGS         WIRX01000001-WIRX01000251
WGS_SCAFLD  NZ_WIRX01000001-NZ_WIRX01000251
//
LOCUS       NZ_JBJMXU010000000   4647484 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Infantis strain
            YZU1482, whole genome shotgun sequencing project.
ACCESSION   NZ_JBJMXU000000000
VERSION     NZ_JBJMXU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45124524
            Assembly: GCF_045809165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Infantis
  ORGANISM  Salmonella enterica subsp. enterica serovar Infantis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4647484)
  AUTHORS   Mang,C.
  TITLE     Salmonella enterica subsp. enterica serovar Infantis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4647484)
  AUTHORS   Mang,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2024) Jiangsu Key Laboratory of Zoonosis,
            Yangzhou University, 48 East Wenhui Road, Yangzhou, Jiangsu 225009,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJMXU000000000.1.
            The Salmonella enterica subsp. enterica serovar Infantis whole
            genome shotgun (WGS) project has the project accession
            NZ_JBJMXU000000000.  This version of the project (01) has the
            accession number NZ_JBJMXU010000000, and consists of sequences
            JBJMXU010000001-JBJMXU010000057.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 20-DEC-2021
            Assembly Method        :: SPAdes v. SPAdes 3.15
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045809165.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:47:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,557
            CDSs (total)                      :: 4,450
            Genes (coding)                    :: 4,333
            CDSs (with protein)               :: 4,333
            Genes (RNA)                       :: 107
            rRNAs                             :: 4, 3, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 4, 2, 6 (5S, 16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 18
            Pseudo Genes (total)              :: 117
            CDSs (without protein)            :: 117
            Pseudo Genes (ambiguous residues) :: 0 of 117
            Pseudo Genes (frameshifted)       :: 48 of 117
            Pseudo Genes (incomplete)         :: 86 of 117
            Pseudo Genes (internal stop)      :: 17 of 117
            Pseudo Genes (multiple problems)  :: 32 of 117
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4647484
                     /organism="Salmonella enterica subsp. enterica serovar
                     Infantis"
                     /mol_type="genomic DNA"
                     /strain="YZU1482"
                     /serovar="Infantis"
                     /isolation_source="equipment"
                     /sub_species="enterica"
                     /db_xref="taxon:595"
                     /geo_loc_name="China: Nan Tong"
                     /collection_date="2019-09-26"
                     /collected_by="Meng Chuang"
WGS         JBJMXU010000001-JBJMXU010000057
WGS_SCAFLD  NZ_JBJMXU010000001-NZ_JBJMXU010000057
//
LOCUS       NZ_WIRS01000000      7136693 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium meliloti strain KH35c, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WIRS00000000
VERSION     NZ_WIRS00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766405
            Assembly: GCF_009599715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium meliloti (Rhizobium meliloti)
  ORGANISM  Sinorhizobium meliloti
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 7136693)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7136693)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WIRS00000000.1.
            The Sinorhizobium meliloti whole genome shotgun (WGS) project has
            the project accession NZ_WIRS00000000.  This version of the project
            (01) has the accession number NZ_WIRS01000000, and consists of
            sequences WIRS01000001-WIRS01000265.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009599715.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:54:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,834
            CDSs (total)                      :: 6,756
            Genes (coding)                    :: 6,494
            CDSs (with protein)               :: 6,494
            Genes (RNA)                       :: 78
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 262
            CDSs (without protein)            :: 262
            Pseudo Genes (ambiguous residues) :: 0 of 262
            Pseudo Genes (frameshifted)       :: 144 of 262
            Pseudo Genes (incomplete)         :: 169 of 262
            Pseudo Genes (internal stop)      :: 19 of 262
            Pseudo Genes (multiple problems)  :: 66 of 262
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7136693
                     /organism="Sinorhizobium meliloti"
                     /mol_type="genomic DNA"
                     /strain="KH35c"
                     /isolation_source="plant root nodules"
                     /host="Medicago truncatula"
                     /db_xref="taxon:382"
                     /geo_loc_name="France"
WGS         WIRS01000001-WIRS01000265
WGS_SCAFLD  NZ_WIRS01000001-NZ_WIRS01000265
//
LOCUS       NZ_WIRU01000000      7216647 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium medicae strain KH36c, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WIRU00000000
VERSION     NZ_WIRU00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766407
            Assembly: GCF_009599905.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium medicae (Ensifer medicae)
  ORGANISM  Sinorhizobium medicae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 7216647)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7216647)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WIRU00000000.1.
            The Sinorhizobium medicae whole genome shotgun (WGS) project has
            the project accession NZ_WIRU00000000.  This version of the project
            (01) has the accession number NZ_WIRU01000000, and consists of
            sequences WIRU01000001-WIRU01000175.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009599905.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:01:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,070
            CDSs (total)                      :: 6,978
            Genes (coding)                    :: 6,592
            CDSs (with protein)               :: 6,592
            Genes (RNA)                       :: 92
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 386
            CDSs (without protein)            :: 386
            Pseudo Genes (ambiguous residues) :: 0 of 386
            Pseudo Genes (frameshifted)       :: 237 of 386
            Pseudo Genes (incomplete)         :: 233 of 386
            Pseudo Genes (internal stop)      :: 42 of 386
            Pseudo Genes (multiple problems)  :: 111 of 386
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7216647
                     /organism="Sinorhizobium medicae"
                     /mol_type="genomic DNA"
                     /strain="KH36c"
                     /isolation_source="plant root nodules"
                     /host="Medicago truncatula"
                     /db_xref="taxon:110321"
                     /geo_loc_name="France"
WGS         WIRU01000001-WIRU01000175
WGS_SCAFLD  NZ_WIRU01000001-NZ_WIRU01000175
//
LOCUS       NZ_WIRN01000000      7205044 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium meliloti strain HM015-1, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WIRN00000000
VERSION     NZ_WIRN00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766400
            Assembly: GCF_009599615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium meliloti (Rhizobium meliloti)
  ORGANISM  Sinorhizobium meliloti
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 7205044)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7205044)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WIRN00000000.1.
            The Sinorhizobium meliloti whole genome shotgun (WGS) project has
            the project accession NZ_WIRN00000000.  This version of the project
            (01) has the accession number NZ_WIRN01000000, and consists of
            sequences WIRN01000001-WIRN01000202.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009599615.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:44:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,007
            CDSs (total)                      :: 6,900
            Genes (coding)                    :: 6,603
            CDSs (with protein)               :: 6,603
            Genes (RNA)                       :: 107
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 84
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 297
            CDSs (without protein)            :: 297
            Pseudo Genes (ambiguous residues) :: 0 of 297
            Pseudo Genes (frameshifted)       :: 156 of 297
            Pseudo Genes (incomplete)         :: 191 of 297
            Pseudo Genes (internal stop)      :: 28 of 297
            Pseudo Genes (multiple problems)  :: 69 of 297
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7205044
                     /organism="Sinorhizobium meliloti"
                     /mol_type="genomic DNA"
                     /strain="HM015-1"
                     /isolation_source="plant root nodules"
                     /host="Medicago truncatula"
                     /db_xref="taxon:382"
                     /geo_loc_name="France"
WGS         WIRN01000001-WIRN01000202
WGS_SCAFLD  NZ_WIRN01000001-NZ_WIRN01000202
//
LOCUS       NZ_WIRL01000000      7283458 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium meliloti strain HM007-17, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WIRL00000000
VERSION     NZ_WIRL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766398
            Assembly: GCF_009600005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium meliloti (Rhizobium meliloti)
  ORGANISM  Sinorhizobium meliloti
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 7283458)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7283458)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WIRL00000000.1.
            The Sinorhizobium meliloti whole genome shotgun (WGS) project has
            the project accession NZ_WIRL00000000.  This version of the project
            (01) has the accession number NZ_WIRL01000000, and consists of
            sequences WIRL01000001-WIRL01000131.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009600005.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:35:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,967
            CDSs (total)                      :: 6,882
            Genes (coding)                    :: 6,601
            CDSs (with protein)               :: 6,601
            Genes (RNA)                       :: 85
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 281
            CDSs (without protein)            :: 281
            Pseudo Genes (ambiguous residues) :: 0 of 281
            Pseudo Genes (frameshifted)       :: 171 of 281
            Pseudo Genes (incomplete)         :: 180 of 281
            Pseudo Genes (internal stop)      :: 22 of 281
            Pseudo Genes (multiple problems)  :: 88 of 281
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7283458
                     /organism="Sinorhizobium meliloti"
                     /mol_type="genomic DNA"
                     /strain="HM007-17"
                     /isolation_source="plant root nodules"
                     /host="Medicago truncatula"
                     /db_xref="taxon:382"
                     /geo_loc_name="France"
WGS         WIRL01000001-WIRL01000131
WGS_SCAFLD  NZ_WIRL01000001-NZ_WIRL01000131
//
LOCUS       NZ_JBJDIZ010000000   4682202 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Salmonella enterica strain MRS-24_2324, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJDIZ000000000
VERSION     NZ_JBJDIZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44603168
            Assembly: GCF_045760485.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica
  ORGANISM  Salmonella enterica
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4682202)
  AUTHORS   Kornschober,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-NOV-2024) NRC Salmonella Austria, Austrian Agency for
            Health and Food Safety, Beethovenstrasse 6, Graz 8010, Austria
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJDIZ000000000.1.
            The Salmonella enterica whole genome shotgun (WGS) project has the
            project accession NZ_JBJDIZ000000000.  This version of the project
            (01) has the accession number NZ_JBJDIZ010000000, and consists of
            sequences JBJDIZ010000001-JBJDIZ010000115.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 27-SEP-2024
            Assembly Method        :: SPAdes v. 4.0.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 86.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045760485.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:31:46
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,573
            CDSs (total)                      :: 4,443
            Genes (coding)                    :: 4,327
            CDSs (with protein)               :: 4,327
            Genes (RNA)                       :: 130
            rRNAs                             :: 9, 8, 20 (5S, 16S, 23S)
            complete rRNAs                    :: 7 (5S)
            partial rRNAs                     :: 2, 8, 20 (5S, 16S, 23S)
            tRNAs                             :: 79
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 116
            CDSs (without protein)            :: 116
            Pseudo Genes (ambiguous residues) :: 0 of 116
            Pseudo Genes (frameshifted)       :: 44 of 116
            Pseudo Genes (incomplete)         :: 93 of 116
            Pseudo Genes (internal stop)      :: 20 of 116
            Pseudo Genes (multiple problems)  :: 36 of 116
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4682202
                     /organism="Salmonella enterica"
                     /mol_type="genomic DNA"
                     /strain="MRS-24_2324"
                     /isolation_source="rocket salad"
                     /db_xref="taxon:28901"
                     /geo_loc_name="Austria: Graz"
                     /lat_lon="47.07 N 15.42 E"
                     /collection_date="2024-09-12"
                     /collected_by="health authorities"
WGS         JBJDIZ010000001-JBJDIZ010000115
WGS_SCAFLD  NZ_JBJDIZ010000001-NZ_JBJDIZ010000115
//
LOCUS       NZ_JBJMYA010000000   4735745 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Infantis strain
            YZU1488, whole genome shotgun sequencing project.
ACCESSION   NZ_JBJMYA000000000
VERSION     NZ_JBJMYA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45124530
            Assembly: GCF_045809045.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Infantis
  ORGANISM  Salmonella enterica subsp. enterica serovar Infantis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4735745)
  AUTHORS   Mang,C.
  TITLE     Salmonella enterica subsp. enterica serovar Infantis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4735745)
  AUTHORS   Mang,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2024) Jiangsu Key Laboratory of Zoonosis,
            Yangzhou University, 48 East Wenhui Road, Yangzhou, Jiangsu 225009,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJMYA000000000.1.
            The Salmonella enterica subsp. enterica serovar Infantis whole
            genome shotgun (WGS) project has the project accession
            NZ_JBJMYA000000000.  This version of the project (01) has the
            accession number NZ_JBJMYA010000000, and consists of sequences
            JBJMYA010000001-JBJMYA010000062.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 20-DEC-2021
            Assembly Method        :: SPAdes v. SPAdes 3.15
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045809045.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:44:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,665
            CDSs (total)                      :: 4,556
            Genes (coding)                    :: 4,437
            CDSs (with protein)               :: 4,437
            Genes (RNA)                       :: 109
            rRNAs                             :: 4, 4, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 4, 3, 7 (5S, 16S, 23S)
            tRNAs                             :: 76
            ncRNAs                            :: 18
            Pseudo Genes (total)              :: 119
            CDSs (without protein)            :: 119
            Pseudo Genes (ambiguous residues) :: 0 of 119
            Pseudo Genes (frameshifted)       :: 48 of 119
            Pseudo Genes (incomplete)         :: 89 of 119
            Pseudo Genes (internal stop)      :: 17 of 119
            Pseudo Genes (multiple problems)  :: 32 of 119
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4735745
                     /organism="Salmonella enterica subsp. enterica serovar
                     Infantis"
                     /mol_type="genomic DNA"
                     /strain="YZU1488"
                     /serovar="Infantis"
                     /isolation_source="egg carton"
                     /sub_species="enterica"
                     /db_xref="taxon:595"
                     /geo_loc_name="China: Nan Tong"
                     /collection_date="2019-09-26"
                     /collected_by="Meng Chuang"
WGS         JBJMYA010000001-JBJMYA010000062
WGS_SCAFLD  NZ_JBJMYA010000001-NZ_JBJMYA010000062
//
LOCUS       NZ_WIST01000000      7394774 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium meliloti strain Rm41, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WIST00000000
VERSION     NZ_WIST00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766432
            Assembly: GCF_009601625.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium meliloti (Rhizobium meliloti)
  ORGANISM  Sinorhizobium meliloti
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 7394774)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7394774)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WIST00000000.1.
            The Sinorhizobium meliloti whole genome shotgun (WGS) project has
            the project accession NZ_WIST00000000.  This version of the project
            (01) has the accession number NZ_WIST01000000, and consists of
            sequences WIST01000001-WIST01000190.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009601625.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:13:21
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,199
            CDSs (total)                      :: 7,120
            Genes (coding)                    :: 6,820
            CDSs (with protein)               :: 6,820
            Genes (RNA)                       :: 79
            rRNAs                             :: 5, 5, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 5, 5 (5S, 16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 300
            CDSs (without protein)            :: 300
            Pseudo Genes (ambiguous residues) :: 0 of 300
            Pseudo Genes (frameshifted)       :: 188 of 300
            Pseudo Genes (incomplete)         :: 175 of 300
            Pseudo Genes (internal stop)      :: 26 of 300
            Pseudo Genes (multiple problems)  :: 79 of 300
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7394774
                     /organism="Sinorhizobium meliloti"
                     /mol_type="genomic DNA"
                     /strain="Rm41"
                     /isolation_source="plant root nodules"
                     /host="Medicago sativa"
                     /db_xref="taxon:382"
                     /geo_loc_name="Hungary"
WGS         WIST01000001-WIST01000190
WGS_SCAFLD  NZ_WIST01000001-NZ_WIST01000190
//
LOCUS       NZ_QXNE01000000      2361615 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Rodentibacter pneumotropicus strain 602_16, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QXNE00000000
VERSION     NZ_QXNE00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09983114
            Assembly: GCF_004795435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Rodentibacter pneumotropicus
  ORGANISM  Rodentibacter pneumotropicus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Rodentibacter.
REFERENCE   1  (bases 1 to 2361615)
  AUTHORS   Adhikary,S., Bisgaard,M., Boot,R., Benga,L., Nicklas,W. and
            Christensen,H.
  TITLE     Development of multi locus sequence typing (MLST) of Rodentibacter
            pneumotropicus
  JOURNAL   Vet Microbiol 231, 11-17 (2019)
   PUBMED   30955797
REFERENCE   2  (bases 1 to 2361615)
  AUTHORS   Christensen,H., Benga,L. and Adhikary,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2018) Veterinary Animal Sciences, University of
            Copenhagen, Stigbojlen 4, Frederiksberg, MI 1870 C, Denmark
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QXNE00000000.1.
            The Rodentibacter pneumotropicus whole genome shotgun (WGS) project
            has the project accession NZ_QXNE00000000.  This version of the
            project (01) has the accession number NZ_QXNE01000000, and consists
            of sequences QXNE01000001-QXNE01000118.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 67.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004795435.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:49:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,342
            CDSs (total)                      :: 2,293
            Genes (coding)                    :: 2,234
            CDSs (with protein)               :: 2,234
            Genes (RNA)                       :: 49
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 21 of 59
            Pseudo Genes (incomplete)         :: 47 of 59
            Pseudo Genes (internal stop)      :: 4 of 59
            Pseudo Genes (multiple problems)  :: 11 of 59
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2361615
                     /organism="Rodentibacter pneumotropicus"
                     /mol_type="genomic DNA"
                     /strain="602_16"
                     /host="Mouse"
                     /db_xref="taxon:758"
                     /geo_loc_name="Germany"
                     /collection_date="2016"
WGS         QXNE01000001-QXNE01000118
WGS_SCAFLD  NZ_QXNE01000001-NZ_QXNE01000118
//
LOCUS       NZ_WISO01000000      7800381 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium meliloti strain M270, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WISO00000000
VERSION     NZ_WISO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766427
            Assembly: GCF_009601255.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium meliloti (Rhizobium meliloti)
  ORGANISM  Sinorhizobium meliloti
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 7800381)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7800381)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WISO00000000.1.
            The Sinorhizobium meliloti whole genome shotgun (WGS) project has
            the project accession NZ_WISO00000000.  This version of the project
            (01) has the accession number NZ_WISO01000000, and consists of
            sequences WISO01000001-WISO01000377.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009601255.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:06:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,943
            CDSs (total)                      :: 7,857
            Genes (coding)                    :: 7,259
            CDSs (with protein)               :: 7,259
            Genes (RNA)                       :: 86
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 598
            CDSs (without protein)            :: 598
            Pseudo Genes (ambiguous residues) :: 2 of 598
            Pseudo Genes (frameshifted)       :: 371 of 598
            Pseudo Genes (incomplete)         :: 369 of 598
            Pseudo Genes (internal stop)      :: 52 of 598
            Pseudo Genes (multiple problems)  :: 182 of 598
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7800381
                     /organism="Sinorhizobium meliloti"
                     /mol_type="genomic DNA"
                     /strain="M270"
                     /isolation_source="plant root nodules"
                     /host="Medicago truncatula"
                     /db_xref="taxon:382"
                     /geo_loc_name="Jordan"
WGS         WISO01000001-WISO01000377
WGS_SCAFLD  NZ_WISO01000001-NZ_WISO01000377
//
LOCUS       NZ_JBJMYB010000000   4647796 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Infantis strain
            YZU1489, whole genome shotgun sequencing project.
ACCESSION   NZ_JBJMYB000000000
VERSION     NZ_JBJMYB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45124531
            Assembly: GCF_045809025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Infantis
  ORGANISM  Salmonella enterica subsp. enterica serovar Infantis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4647796)
  AUTHORS   Mang,C.
  TITLE     Salmonella enterica subsp. enterica serovar Infantis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4647796)
  AUTHORS   Mang,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2024) Jiangsu Key Laboratory of Zoonosis,
            Yangzhou University, 48 East Wenhui Road, Yangzhou, Jiangsu 225009,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJMYB000000000.1.
            The Salmonella enterica subsp. enterica serovar Infantis whole
            genome shotgun (WGS) project has the project accession
            NZ_JBJMYB000000000.  This version of the project (01) has the
            accession number NZ_JBJMYB010000000, and consists of sequences
            JBJMYB010000001-JBJMYB010000062.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 20-DEC-2021
            Assembly Method        :: SPAdes v. SPAdes 3.15
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045809025.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:58:02
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,556
            CDSs (total)                      :: 4,451
            Genes (coding)                    :: 4,332
            CDSs (with protein)               :: 4,332
            Genes (RNA)                       :: 105
            rRNAs                             :: 4, 3, 6 (5S, 16S, 23S)
            partial rRNAs                     :: 4, 3, 6 (5S, 16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 18
            Pseudo Genes (total)              :: 119
            CDSs (without protein)            :: 119
            Pseudo Genes (ambiguous residues) :: 0 of 119
            Pseudo Genes (frameshifted)       :: 48 of 119
            Pseudo Genes (incomplete)         :: 88 of 119
            Pseudo Genes (internal stop)      :: 17 of 119
            Pseudo Genes (multiple problems)  :: 32 of 119
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4647796
                     /organism="Salmonella enterica subsp. enterica serovar
                     Infantis"
                     /mol_type="genomic DNA"
                     /strain="YZU1489"
                     /serovar="Infantis"
                     /isolation_source="egg carton"
                     /sub_species="enterica"
                     /db_xref="taxon:595"
                     /geo_loc_name="China: Nan Tong"
                     /collection_date="2019-09-26"
                     /collected_by="Meng Chuang"
WGS         JBJMYB010000001-JBJMYB010000062
WGS_SCAFLD  NZ_JBJMYB010000001-NZ_JBJMYB010000062
//
LOCUS       NZ_QXNG01000000      2415519 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Rodentibacter pneumotropicus strain 1596_07, whole genome shotgun
            sequencing project.
ACCESSION   NZ_QXNG00000000
VERSION     NZ_QXNG00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09983833
            Assembly: GCF_004795315.1
KEYWORDS    WGS; RefSeq.
SOURCE      Rodentibacter pneumotropicus
  ORGANISM  Rodentibacter pneumotropicus
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Pasteurellales; Pasteurellaceae; Rodentibacter.
REFERENCE   1  (bases 1 to 2415519)
  AUTHORS   Adhikary,S., Bisgaard,M., Boot,R., Benga,L., Nicklas,W. and
            Christensen,H.
  TITLE     Development of multi locus sequence typing (MLST) of Rodentibacter
            pneumotropicus
  JOURNAL   Vet Microbiol 231, 11-17 (2019)
   PUBMED   30955797
REFERENCE   2  (bases 1 to 2415519)
  AUTHORS   Christensen,H., Benga,L. and Adhikary,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-SEP-2018) Veterinary Animal Sciences, University of
            Copenhagen, Stigbojlen 4, Frederiksberg, MI 1870 C, Denmark
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            QXNG00000000.1.
            The Rodentibacter pneumotropicus whole genome shotgun (WGS) project
            has the project accession NZ_QXNG00000000.  This version of the
            project (01) has the accession number NZ_QXNG01000000, and consists
            of sequences QXNG01000001-QXNG01000162.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: CLC NGS Cell v. 8
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 41.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_004795315.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 09:36:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,367
            CDSs (total)                      :: 2,319
            Genes (coding)                    :: 2,249
            CDSs (with protein)               :: 2,249
            Genes (RNA)                       :: 48
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 40
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 22 of 70
            Pseudo Genes (incomplete)         :: 49 of 70
            Pseudo Genes (internal stop)      :: 13 of 70
            Pseudo Genes (multiple problems)  :: 13 of 70
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2415519
                     /organism="Rodentibacter pneumotropicus"
                     /mol_type="genomic DNA"
                     /strain="1596_07"
                     /host="mouse"
                     /db_xref="taxon:758"
                     /geo_loc_name="Germany"
                     /collection_date="2007"
WGS         QXNG01000001-QXNG01000162
WGS_SCAFLD  NZ_QXNG01000001-NZ_QXNG01000162
//
LOCUS       NZ_WISL01000000      7115987 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium meliloti strain M243, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WISL00000000
VERSION     NZ_WISL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766424
            Assembly: GCF_009601185.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium meliloti (Rhizobium meliloti)
  ORGANISM  Sinorhizobium meliloti
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 7115987)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7115987)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WISL00000000.1.
            The Sinorhizobium meliloti whole genome shotgun (WGS) project has
            the project accession NZ_WISL00000000.  This version of the project
            (01) has the accession number NZ_WISL01000000, and consists of
            sequences WISL01000001-WISL01000154.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009601185.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:02:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,836
            CDSs (total)                      :: 6,747
            Genes (coding)                    :: 6,453
            CDSs (with protein)               :: 6,453
            Genes (RNA)                       :: 89
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 294
            CDSs (without protein)            :: 294
            Pseudo Genes (ambiguous residues) :: 1 of 294
            Pseudo Genes (frameshifted)       :: 168 of 294
            Pseudo Genes (incomplete)         :: 187 of 294
            Pseudo Genes (internal stop)      :: 27 of 294
            Pseudo Genes (multiple problems)  :: 83 of 294
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7115987
                     /organism="Sinorhizobium meliloti"
                     /mol_type="genomic DNA"
                     /strain="M243"
                     /isolation_source="plant root nodules"
                     /host="Medicago rotata"
                     /db_xref="taxon:382"
                     /geo_loc_name="Jordan"
WGS         WISL01000001-WISL01000154
WGS_SCAFLD  NZ_WISL01000001-NZ_WISL01000154
//
LOCUS       NZ_CDVDSY010000000   4965900 bp    DNA     linear   ENV 27-MAR-2026
DEFINITION  MAG: Salipiger bermudensis isolate MarMAG_005451, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVDSY000000000
VERSION     NZ_CDVDSY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737237
            Assembly: GCF_977658605.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Salipiger bermudensis (marine metagenome)
  ORGANISM  Salipiger bermudensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodobacterales; Roseobacteraceae; Salipiger.
REFERENCE   1  (bases 1 to 4965900)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVDSY000000000.1.
            The Salipiger bermudensis whole genome shotgun (WGS) project has
            the project accession NZ_CDVDSY000000000.  This version of the
            project (01) has the accession number NZ_CDVDSY010000000, and
            consists of sequences CDVDSY010000001-CDVDSY010000140.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977658605.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:45:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,761
            CDSs (total)                      :: 4,724
            Genes (coding)                    :: 4,663
            CDSs (with protein)               :: 4,663
            Genes (RNA)                       :: 37
            tRNAs                             :: 34
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 61
            CDSs (without protein)            :: 61
            Pseudo Genes (ambiguous residues) :: 0 of 61
            Pseudo Genes (frameshifted)       :: 12 of 61
            Pseudo Genes (incomplete)         :: 52 of 61
            Pseudo Genes (internal stop)      :: 7 of 61
            Pseudo Genes (multiple problems)  :: 8 of 61
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4965900
                     /organism="Salipiger bermudensis"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_005451"
                     /isolation_source="Mariana Trench, free-living
                     microorganism abyssal water (4,000 m)"
                     /db_xref="taxon:344736"
                     /environmental_sample
                     /geo_loc_name="Pacific Ocean"
                     /collection_date="2016-09-15"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVDSY010000001-CDVDSY010000140
WGS_SCAFLD  NZ_CDVDSY010000001-NZ_CDVDSY010000140
//
LOCUS       NZ_WISK01000000      7470055 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium medicae strain M22, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WISK00000000
VERSION     NZ_WISK00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766423
            Assembly: GCF_009601655.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium medicae (Ensifer medicae)
  ORGANISM  Sinorhizobium medicae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 7470055)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7470055)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WISK00000000.1.
            The Sinorhizobium medicae whole genome shotgun (WGS) project has
            the project accession NZ_WISK00000000.  This version of the project
            (01) has the accession number NZ_WISK01000000, and consists of
            sequences WISK01000001-WISK01000214.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009601655.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:55:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,305
            CDSs (total)                      :: 7,219
            Genes (coding)                    :: 6,786
            CDSs (with protein)               :: 6,786
            Genes (RNA)                       :: 86
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 64
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 433
            CDSs (without protein)            :: 433
            Pseudo Genes (ambiguous residues) :: 0 of 433
            Pseudo Genes (frameshifted)       :: 263 of 433
            Pseudo Genes (incomplete)         :: 283 of 433
            Pseudo Genes (internal stop)      :: 50 of 433
            Pseudo Genes (multiple problems)  :: 143 of 433
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7470055
                     /organism="Sinorhizobium medicae"
                     /mol_type="genomic DNA"
                     /strain="M22"
                     /isolation_source="plant root nodules"
                     /host="Medicago polymorpha"
                     /db_xref="taxon:110321"
                     /geo_loc_name="Syria"
WGS         WISK01000001-WISK01000214
WGS_SCAFLD  NZ_WISK01000001-NZ_WISK01000214
//
LOCUS       NZ_JBCPST010000000   2740005 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain IA1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPST000000000
VERSION     NZ_JBCPST000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065894
            Assembly: GCF_045909415.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2740005)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2740005)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPST000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPST000000000.  This version of the
            project (01) has the accession number NZ_JBCPST010000000, and
            consists of sequences JBCPST010000001-JBCPST010000073.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045909415.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:45:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,750
            CDSs (total)                      :: 2,686
            Genes (coding)                    :: 2,591
            CDSs (with protein)               :: 2,591
            Genes (RNA)                       :: 64
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 95
            CDSs (without protein)            :: 95
            Pseudo Genes (ambiguous residues) :: 0 of 95
            Pseudo Genes (frameshifted)       :: 41 of 95
            Pseudo Genes (incomplete)         :: 47 of 95
            Pseudo Genes (internal stop)      :: 23 of 95
            Pseudo Genes (multiple problems)  :: 15 of 95
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2740005
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="IA1"
                     /isolation_source="Raw milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Inner Mongolia autonomous region"
                     /collection_date="2020-08"
                     /collected_by="Zekun Li"
WGS         JBCPST010000001-JBCPST010000073
WGS_SCAFLD  NZ_JBCPST010000001-NZ_JBCPST010000073
//
LOCUS       NZ_JBCPTI010000000   2728246 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain EA1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPTI000000000
VERSION     NZ_JBCPTI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065879
            Assembly: GCF_045909735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2728246)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2728246)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPTI000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPTI000000000.  This version of the
            project (01) has the accession number NZ_JBCPTI010000000, and
            consists of sequences JBCPTI010000001-JBCPTI010000103.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045909735.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:53:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,706
            CDSs (total)                      :: 2,650
            Genes (coding)                    :: 2,532
            CDSs (with protein)               :: 2,532
            Genes (RNA)                       :: 56
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 59 of 118
            Pseudo Genes (incomplete)         :: 50 of 118
            Pseudo Genes (internal stop)      :: 21 of 118
            Pseudo Genes (multiple problems)  :: 10 of 118
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2728246
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="EA1"
                     /isolation_source="Raw milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Inner Mongolia autonomous region"
                     /collection_date="2020-08"
                     /collected_by="Zekun Li"
WGS         JBCPTI010000001-JBCPTI010000103
WGS_SCAFLD  NZ_JBCPTI010000001-NZ_JBCPTI010000103
//
LOCUS       NZ_JBCPTE010000000   2725737 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain EA5, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPTE000000000
VERSION     NZ_JBCPTE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065883
            Assembly: GCF_045909655.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2725737)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2725737)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPTE000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPTE000000000.  This version of the
            project (01) has the accession number NZ_JBCPTE010000000, and
            consists of sequences JBCPTE010000001-JBCPTE010000082.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045909655.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:47:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,712
            CDSs (total)                      :: 2,656
            Genes (coding)                    :: 2,540
            CDSs (with protein)               :: 2,540
            Genes (RNA)                       :: 56
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 116
            CDSs (without protein)            :: 116
            Pseudo Genes (ambiguous residues) :: 0 of 116
            Pseudo Genes (frameshifted)       :: 58 of 116
            Pseudo Genes (incomplete)         :: 48 of 116
            Pseudo Genes (internal stop)      :: 22 of 116
            Pseudo Genes (multiple problems)  :: 10 of 116
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2725737
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="EA5"
                     /isolation_source="Raw milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Inner Mongolia autonomous region"
                     /collection_date="2020-08"
                     /collected_by="Zekun Li"
WGS         JBCPTE010000001-JBCPTE010000082
WGS_SCAFLD  NZ_JBCPTE010000001-NZ_JBCPTE010000082
//
LOCUS       NZ_CDVHHM010000000   3425100 bp    DNA     linear   ENV 27-MAR-2026
DEFINITION  MAG: Salegentibacter mishustinae isolate MarMAG_112940, whole
            genome shotgun sequencing project.
ACCESSION   NZ_CDVHHM000000000
VERSION     NZ_CDVHHM000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737359
            Assembly: GCF_977682655.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Salegentibacter mishustinae (marine metagenome)
  ORGANISM  Salegentibacter mishustinae
            Bacteria; Pseudomonadati; Bacteroidota; Flavobacteriia;
            Flavobacteriales; Flavobacteriaceae; Salegentibacter.
REFERENCE   1  (bases 1 to 3425100)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVHHM000000000.1.
            The Salegentibacter mishustinae whole genome shotgun (WGS) project
            has the project accession NZ_CDVHHM000000000.  This version of the
            project (01) has the accession number NZ_CDVHHM010000000, and
            consists of sequences CDVHHM010000001-CDVHHM010000668.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977682655.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:24:43
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,501
            CDSs (total)                      :: 3,469
            Genes (coding)                    :: 3,295
            CDSs (with protein)               :: 3,295
            Genes (RNA)                       :: 32
            tRNAs                             :: 29
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 174
            CDSs (without protein)            :: 174
            Pseudo Genes (ambiguous residues) :: 0 of 174
            Pseudo Genes (frameshifted)       :: 5 of 174
            Pseudo Genes (incomplete)         :: 167 of 174
            Pseudo Genes (internal stop)      :: 7 of 174
            Pseudo Genes (multiple problems)  :: 4 of 174
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3425100
                     /organism="Salegentibacter mishustinae"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_112940"
                     /isolation_source="Mariana Trench, particle-associated
                     microorganism abyssal water (4,000 m)"
                     /db_xref="taxon:270918"
                     /environmental_sample
                     /geo_loc_name="Pacific Ocean"
                     /collection_date="2016-09-15"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVHHM010000001-CDVHHM010000668
WGS_SCAFLD  NZ_CDVHHM010000001-NZ_CDVHHM010000668
//
LOCUS       NZ_JBCPTT010000000   2841858 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain 93, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPTT000000000
VERSION     NZ_JBCPTT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065868
            Assembly: GCF_045909955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2841858)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2841858)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPTT000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPTT000000000.  This version of the
            project (01) has the accession number NZ_JBCPTT010000000, and
            consists of sequences JBCPTT010000001-JBCPTT010000078.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045909955.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 14:08:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,902
            CDSs (total)                      :: 2,840
            Genes (coding)                    :: 2,748
            CDSs (with protein)               :: 2,748
            Genes (RNA)                       :: 62
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 46 of 92
            Pseudo Genes (incomplete)         :: 48 of 92
            Pseudo Genes (internal stop)      :: 19 of 92
            Pseudo Genes (multiple problems)  :: 16 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2841858
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="93"
                     /isolation_source="Raw milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Henan"
                     /collection_date="2020-06"
                     /collected_by="Zekun Li"
WGS         JBCPTT010000001-JBCPTT010000078
WGS_SCAFLD  NZ_JBCPTT010000001-NZ_JBCPTT010000078
//
LOCUS       NZ_JBCPWF010000000   2771869 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain 109, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPWF000000000
VERSION     NZ_JBCPWF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065803
            Assembly: GCF_045911215.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2771869)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2771869)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPWF000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPWF000000000.  This version of the
            project (01) has the accession number NZ_JBCPWF010000000, and
            consists of sequences JBCPWF010000001-JBCPWF010000066.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045911215.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:56:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,780
            CDSs (total)                      :: 2,717
            Genes (coding)                    :: 2,625
            CDSs (with protein)               :: 2,625
            Genes (RNA)                       :: 63
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 58 of 92
            Pseudo Genes (incomplete)         :: 34 of 92
            Pseudo Genes (internal stop)      :: 16 of 92
            Pseudo Genes (multiple problems)  :: 15 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2771869
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="109"
                     /isolation_source="Raw milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Henan"
                     /collection_date="2020-06"
                     /collected_by="Zekun Li"
WGS         JBCPWF010000001-JBCPWF010000066
WGS_SCAFLD  NZ_JBCPWF010000001-NZ_JBCPWF010000066
//
LOCUS       NZ_WITB01000000      6159528 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium saheli strain USDA4893, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WITB00000000
VERSION     NZ_WITB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766440
            Assembly: GCF_009601395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium saheli (Ensifer saheli)
  ORGANISM  Sinorhizobium saheli
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 6159528)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6159528)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WITB00000000.1.
            The Sinorhizobium saheli whole genome shotgun (WGS) project has the
            project accession NZ_WITB00000000.  This version of the project
            (01) has the accession number NZ_WITB01000000, and consists of
            sequences WITB01000001-WITB01000200.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009601395.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:42:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,859
            CDSs (total)                      :: 5,793
            Genes (coding)                    :: 5,599
            CDSs (with protein)               :: 5,599
            Genes (RNA)                       :: 66
            rRNAs                             :: 1, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 194
            CDSs (without protein)            :: 194
            Pseudo Genes (ambiguous residues) :: 1 of 194
            Pseudo Genes (frameshifted)       :: 102 of 194
            Pseudo Genes (incomplete)         :: 126 of 194
            Pseudo Genes (internal stop)      :: 12 of 194
            Pseudo Genes (multiple problems)  :: 44 of 194
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6159528
                     /organism="Sinorhizobium saheli"
                     /mol_type="genomic DNA"
                     /strain="USDA4893"
                     /isolation_source="plant root nodules"
                     /host="Sesbania cannabina"
                     /db_xref="taxon:36856"
                     /geo_loc_name="Senegal"
WGS         WITB01000001-WITB01000200
WGS_SCAFLD  NZ_WITB01000001-NZ_WITB01000200
//
LOCUS       NZ_JBCPTS010000000   2785044 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain 94, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPTS000000000
VERSION     NZ_JBCPTS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065869
            Assembly: GCF_045909975.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2785044)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2785044)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPTS000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPTS000000000.  This version of the
            project (01) has the accession number NZ_JBCPTS010000000, and
            consists of sequences JBCPTS010000001-JBCPTS010000089.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045909975.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 14:05:44
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,812
            CDSs (total)                      :: 2,752
            Genes (coding)                    :: 2,668
            CDSs (with protein)               :: 2,668
            Genes (RNA)                       :: 60
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 84
            CDSs (without protein)            :: 84
            Pseudo Genes (ambiguous residues) :: 0 of 84
            Pseudo Genes (frameshifted)       :: 43 of 84
            Pseudo Genes (incomplete)         :: 43 of 84
            Pseudo Genes (internal stop)      :: 17 of 84
            Pseudo Genes (multiple problems)  :: 15 of 84
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2785044
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="94"
                     /isolation_source="Raw milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Henan"
                     /collection_date="2020-06"
                     /collected_by="Zekun Li"
WGS         JBCPTS010000001-JBCPTS010000089
WGS_SCAFLD  NZ_JBCPTS010000001-NZ_JBCPTS010000089
//
LOCUS       NZ_JBWBUE010000000   5787930 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Roseibium sp. QJM3NY_11, whole genome shotgun sequencing project.
ACCESSION   NZ_JBWBUE000000000
VERSION     NZ_JBWBUE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449777
            Assembly: GCF_056173175.1
KEYWORDS    WGS; RefSeq.
SOURCE      Roseibium sp. QJM3NY_11
  ORGANISM  Roseibium sp. QJM3NY_11
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Stappiaceae; Roseibium.
REFERENCE   1  (bases 1 to 5787930)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 5787930)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBUE000000000.1.
            The Roseibium sp. QJM3NY_11 whole genome shotgun (WGS) project has
            the project accession NZ_JBWBUE000000000.  This version of the
            project (01) has the accession number NZ_JBWBUE010000000, and
            consists of sequence JBWBUE010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 51x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173175.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:53:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,299
            CDSs (total)                      :: 5,235
            Genes (coding)                    :: 5,176
            CDSs (with protein)               :: 5,176
            Genes (RNA)                       :: 64
            rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 59
            CDSs (without protein)            :: 59
            Pseudo Genes (ambiguous residues) :: 0 of 59
            Pseudo Genes (frameshifted)       :: 29 of 59
            Pseudo Genes (incomplete)         :: 32 of 59
            Pseudo Genes (internal stop)      :: 3 of 59
            Pseudo Genes (multiple problems)  :: 5 of 59
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5787930
                     /organism="Roseibium sp. QJM3NY_11"
                     /mol_type="genomic DNA"
                     /strain="QJM3NY_11"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569836"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBUE010000001
WGS_SCAFLD  NZ_CM149660
//
LOCUS       NZ_DASQPW010000000   4989702 bp    DNA     linear   ENV 27-MAR-2026
DEFINITION  MAG: Stackebrandtia sp. isolate SMAG_U10840, whole genome shotgun
            sequencing project.
ACCESSION   NZ_DASQPW000000000
VERSION     NZ_DASQPW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37946318
            Sequence Read Archive: SRR5915997
            Assembly: GCF_035643755.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq; TPA:assembly.
SOURCE      Stackebrandtia sp. (soil metagenome)
  ORGANISM  Stackebrandtia sp.
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Glycomycetales;
            Glycomycetaceae; Stackebrandtia.
REFERENCE   1  (bases 1 to 4989702)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. doi:
            10.1038/s41467-023-44072-7. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4989702)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            DASQPW000000000.1.
            The Stackebrandtia sp. whole genome shotgun (WGS) project has the
            project accession NZ_DASQPW000000000.  This version of the project
            (01) has the accession number NZ_DASQPW010000000, and consists of
            sequences DASQPW010000001-DASQPW010000325.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_035643755.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 08:54:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,097
            CDSs (total)                      :: 5,049
            Genes (coding)                    :: 4,824
            CDSs (with protein)               :: 4,824
            Genes (RNA)                       :: 48
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 44
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 225
            CDSs (without protein)            :: 225
            Pseudo Genes (ambiguous residues) :: 0 of 225
            Pseudo Genes (frameshifted)       :: 5 of 225
            Pseudo Genes (incomplete)         :: 221 of 225
            Pseudo Genes (internal stop)      :: 1 of 225
            Pseudo Genes (multiple problems)  :: 2 of 225
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4989702
                     /organism="Stackebrandtia sp."
                     /mol_type="genomic DNA"
                     /isolate="SMAG_U10840"
                     /isolation_source="soil"
                     /db_xref="taxon:2023065"
                     /environmental_sample
                     /lat_lon="42.61742 S 147.42263 E"
                     /metagenome_source="soil metagenome"
                     /metagenomic
WGS         DASQPW010000001-DASQPW010000325
WGS_SCAFLD  NZ_DASQPW010000001-NZ_DASQPW010000325
//
LOCUS       NZ_DATJLI010000000   2816356 bp    DNA     linear   ENV 27-MAR-2026
DEFINITION  MAG: Sphingomonas sp. isolate SMAG_U15615, whole genome shotgun
            sequencing project.
ACCESSION   NZ_DATJLI000000000
VERSION     NZ_DATJLI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37937189
            Sequence Read Archive: SRR908272
            Assembly: GCF_035490575.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq; TPA:assembly.
SOURCE      Sphingomonas sp. (soil metagenome)
  ORGANISM  Sphingomonas sp.
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (bases 1 to 2816356)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. doi:
            10.1038/s41467-023-44072-7. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2816356)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            DATJLI000000000.1.
            The Sphingomonas sp. whole genome shotgun (WGS) project has the
            project accession NZ_DATJLI000000000.  This version of the project
            (01) has the accession number NZ_DATJLI010000000, and consists of
            sequences DATJLI010000001-DATJLI010000189.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_035490575.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:47:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,858
            CDSs (total)                      :: 2,817
            Genes (coding)                    :: 2,754
            CDSs (with protein)               :: 2,754
            Genes (RNA)                       :: 41
            tRNAs                             :: 38
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 7 of 63
            Pseudo Genes (incomplete)         :: 61 of 63
            Pseudo Genes (internal stop)      :: 4 of 63
            Pseudo Genes (multiple problems)  :: 6 of 63
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2816356
                     /organism="Sphingomonas sp."
                     /mol_type="genomic DNA"
                     /isolate="SMAG_U15615"
                     /isolation_source="soil"
                     /db_xref="taxon:28214"
                     /environmental_sample
                     /geo_loc_name="Israel"
                     /lat_lon="31.99 N 34.82 E"
                     /metagenome_source="soil metagenome"
                     /metagenomic
WGS         DATJLI010000001-DATJLI010000189
WGS_SCAFLD  NZ_DATJLI010000001-NZ_DATJLI010000189
//
LOCUS       NZ_JBWBUD010000000   4306969 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Rossellomorea sp. QJM3NY_18, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWBUD000000000
VERSION     NZ_JBWBUD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449778
            Assembly: GCF_056173145.1
KEYWORDS    WGS; RefSeq.
SOURCE      Rossellomorea sp. QJM3NY_18
  ORGANISM  Rossellomorea sp. QJM3NY_18
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae;
            Rossellomorea.
REFERENCE   1  (bases 1 to 4306969)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4306969)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBUD000000000.1.
            The Rossellomorea sp. QJM3NY_18 whole genome shotgun (WGS) project
            has the project accession NZ_JBWBUD000000000.  This version of the
            project (01) has the accession number NZ_JBWBUD010000000, and
            consists of sequence JBWBUD010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 299.4x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173145.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:49:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,422
            CDSs (total)                      :: 4,273
            Genes (coding)                    :: 4,251
            CDSs (with protein)               :: 4,251
            Genes (RNA)                       :: 149
            rRNAs                             :: 11, 11, 11 (5S, 16S, 23S)
            complete rRNAs                    :: 11, 11, 11 (5S, 16S, 23S)
            tRNAs                             :: 111
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 22
            CDSs (without protein)            :: 22
            Pseudo Genes (ambiguous residues) :: 0 of 22
            Pseudo Genes (frameshifted)       :: 8 of 22
            Pseudo Genes (incomplete)         :: 12 of 22
            Pseudo Genes (internal stop)      :: 4 of 22
            Pseudo Genes (multiple problems)  :: 2 of 22
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4306969
                     /organism="Rossellomorea sp. QJM3NY_18"
                     /mol_type="genomic DNA"
                     /strain="QJM3NY_18"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569837"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBUD010000001
WGS_SCAFLD  NZ_CM149659
//
LOCUS       NZ_WITC01000000      7081256 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sinorhizobium terangae strain USDA4894, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WITC00000000
VERSION     NZ_WITC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN00766441
            Assembly: GCF_009601505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sinorhizobium terangae (Ensifer terangae)
  ORGANISM  Sinorhizobium terangae
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
            Sinorhizobium.
REFERENCE   1  (bases 1 to 7081256)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B.D., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudge,J., Bharti,A.K., Farmer,A.D.,
            May,G.D., Woodward,J.E., Medigue,C., Vallenet,D., Lajus,A.,
            Rouy,Z., Martinez-Vaz,B., Tiffin,P., Young,N.D. and Sadowsky,M.J.
  TITLE     Comparative genomics of the core and accessory genomes of 48
            Sinorhizobium strains comprising five genospecies
  JOURNAL   Genome Biol 14 (2), R17 (2013)
   PUBMED   23425606
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7081256)
  AUTHORS   Sugawara,M., Epstein,B., Badgley,B., Unno,T., Xu,L., Reese,J.,
            Gyaneshwar,P., Denny,R., Mudege,J., Bharti,A., Farmer,A., May,G.,
            Woodward,J., Medigue,C., Vallenet,D., Lajus,A., Rouy,Z.,
            Martinez-Vaz,B., Tiffin,P., Young,N. and Sadowsky,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) Plant and Microbial Biology, University of
            Minnesota, 140 Gortner Lab, 1479 Gortner Ave, St. Paul, MN 55108,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WITC00000000.1.
            The Sinorhizobium terangae whole genome shotgun (WGS) project has
            the project accession NZ_WITC00000000.  This version of the project
            (01) has the accession number NZ_WITC01000000, and consists of
            sequences WITC01000001-WITC01000139.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2010
            Assembly Method        :: ABySS v. 1.1.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 150x
            Sequencing Technology  :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009601505.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:48:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,736
            CDSs (total)                      :: 6,653
            Genes (coding)                    :: 6,369
            CDSs (with protein)               :: 6,369
            Genes (RNA)                       :: 83
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 284
            CDSs (without protein)            :: 284
            Pseudo Genes (ambiguous residues) :: 0 of 284
            Pseudo Genes (frameshifted)       :: 158 of 284
            Pseudo Genes (incomplete)         :: 203 of 284
            Pseudo Genes (internal stop)      :: 24 of 284
            Pseudo Genes (multiple problems)  :: 91 of 284
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7081256
                     /organism="Sinorhizobium terangae"
                     /mol_type="genomic DNA"
                     /strain="USDA4894"
                     /isolation_source="plant root nodules"
                     /host="Senegalia laeta"
                     /db_xref="taxon:110322"
                     /geo_loc_name="Senegal"
WGS         WITC01000001-WITC01000139
WGS_SCAFLD  NZ_WITC01000001-NZ_WITC01000139
//
LOCUS       NZ_JBJMXP010000000   4647555 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Salmonella enterica subsp. enterica serovar Infantis strain
            YZU1477, whole genome shotgun sequencing project.
ACCESSION   NZ_JBJMXP000000000
VERSION     NZ_JBJMXP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45124519
            Assembly: GCF_045808885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Salmonella enterica subsp. enterica serovar Infantis
  ORGANISM  Salmonella enterica subsp. enterica serovar Infantis
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Salmonella.
REFERENCE   1  (bases 1 to 4647555)
  AUTHORS   Mang,C.
  TITLE     Salmonella enterica subsp. enterica serovar Infantis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4647555)
  AUTHORS   Mang,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2024) Jiangsu Key Laboratory of Zoonosis,
            Yangzhou University, 48 East Wenhui Road, Yangzhou, Jiangsu 225009,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJMXP000000000.1.
            The Salmonella enterica subsp. enterica serovar Infantis whole
            genome shotgun (WGS) project has the project accession
            NZ_JBJMXP000000000.  This version of the project (01) has the
            accession number NZ_JBJMXP010000000, and consists of sequences
            JBJMXP010000001-JBJMXP010000058.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 20-DEC-2021
            Assembly Method        :: SPAdes v. SPAdes 3.15
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045808885.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:42:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,556
            CDSs (total)                      :: 4,451
            Genes (coding)                    :: 4,334
            CDSs (with protein)               :: 4,334
            Genes (RNA)                       :: 105
            rRNAs                             :: 4, 3, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 4, 2, 6 (5S, 16S, 23S)
            tRNAs                             :: 75
            ncRNAs                            :: 17
            Pseudo Genes (total)              :: 117
            CDSs (without protein)            :: 117
            Pseudo Genes (ambiguous residues) :: 0 of 117
            Pseudo Genes (frameshifted)       :: 48 of 117
            Pseudo Genes (incomplete)         :: 86 of 117
            Pseudo Genes (internal stop)      :: 17 of 117
            Pseudo Genes (multiple problems)  :: 32 of 117
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4647555
                     /organism="Salmonella enterica subsp. enterica serovar
                     Infantis"
                     /mol_type="genomic DNA"
                     /strain="YZU1477"
                     /serovar="Infantis"
                     /isolation_source="egg shell"
                     /host="animal"
                     /sub_species="enterica"
                     /db_xref="taxon:595"
                     /geo_loc_name="China: Nan Tong"
                     /collection_date="2019-08-20"
                     /collected_by="Meng Chuang"
WGS         JBJMXP010000001-JBJMXP010000058
WGS_SCAFLD  NZ_JBJMXP010000001-NZ_JBJMXP010000058
//
LOCUS       NZ_JAOWTL010000000   2683994 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain BSI_254.01, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAOWTL000000000
VERSION     NZ_JAOWTL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN31230872
            Assembly: GCF_030337285.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2683994)
  AUTHORS   Schwartz,D.J., Shalon,N., Wardenburg,K., DeVeaux,A., Wallace,M.A.,
            Hall-Moore,C., Ndao,I.M., Sullivan,J.E., Radmacher,P., Escobedo,M.,
            Burnham,C.D., Warner,B.B., Tarr,P.I. and Dantas,G.
  TITLE     Gut pathogen colonization precedes bloodstream infection in the
            neonatal intensive care unit
  JOURNAL   Sci Transl Med 15 (694), eadg5562 (2023)
   PUBMED   37134153
  REMARK    Erratum:[Sci Transl Med. 2024 May;16(745):eadp7701. doi:
            10.1126/scitranslmed.adp7701. PMID: 38691623]
REFERENCE   2  (bases 1 to 2683994)
  AUTHORS   Schwartz,D.J., Shalon,N., Wardenburg,K., Deveaux,A., Paruthiyil,S.,
            Wallace,M., Hall-Moore,C., Burnham,C.-A.D., Warner,B., Tarr,P.I.
            and Dantas,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2022) Department of Pediatrics, Washington
            University in St. Louis, 660 S. Euclid Ave, Saint Louis, MO 63110,
            USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAOWTL000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JAOWTL000000000.  This version of the
            project (01) has the accession number NZ_JAOWTL010000000, and
            consists of sequences JAOWTL010000001-JAOWTL010000020.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: SEP-2020
            Assembly Method        :: SPAdes v. 3.14.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_030337285.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:40:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,658
            CDSs (total)                      :: 2,590
            Genes (coding)                    :: 2,516
            CDSs (with protein)               :: 2,516
            Genes (RNA)                       :: 68
            rRNAs                             :: 4, 3, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 16S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 74
            CDSs (without protein)            :: 74
            Pseudo Genes (ambiguous residues) :: 0 of 74
            Pseudo Genes (frameshifted)       :: 37 of 74
            Pseudo Genes (incomplete)         :: 34 of 74
            Pseudo Genes (internal stop)      :: 20 of 74
            Pseudo Genes (multiple problems)  :: 16 of 74
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2683994
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="BSI_254.01"
                     /isolation_source="blood from hospitalized preterm
                     neonate"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="USA"
                     /lat_lon="38.6270 N 90.1994 W"
                     /collection_date="2009-09/2013-08"
                     /collected_by="Washington University School of Medicine
                     Clinical Microbiology Laboratory"
WGS         JAOWTL010000001-JAOWTL010000020
WGS_SCAFLD  NZ_JAOWTL010000001-NZ_JAOWTL010000020
//
LOCUS       NZ_JAXCWU010000000   3824795 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Sphingomonas sp. CFBP8993, whole genome shotgun sequencing project.
ACCESSION   NZ_JAXCWU000000000
VERSION     NZ_JAXCWU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN38288747
            Assembly: GCF_034044895.1
KEYWORDS    WGS; RefSeq.
SOURCE      Sphingomonas sp. CFBP8993
  ORGANISM  Sphingomonas sp. CFBP8993
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Sphingomonadales; Sphingomonadaceae; Sphingomonas.
REFERENCE   1  (bases 1 to 3824795)
  AUTHORS   Arnault,G., Marais,C., Preveaux,A., Briand,M., Poisson,A.S.,
            Sarniguet,A., Barret,M. and Simonin,M.
  TITLE     Seedling microbiota engineering using bacterial synthetic community
            inoculation on seeds
  JOURNAL   FEMS Microbiol Ecol 100 (4) (2024)
   PUBMED   38503562
  REMARK    Erratum:[FEMS Microbiol Ecol. 2024 May 14;100(6):fiae065. doi:
            10.1093/femsec/fiae065. PMID: 38748655]
REFERENCE   2  (bases 1 to 3824795)
  AUTHORS   Arnault,G., Marais,C., Preveaux,A., Briand,M., Poisson,A.S.,
            Sarniguet,A., Barret,M. and Simonin,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-NOV-2023) SPE, INRAE, rue Georges Morel, Beaucouze
            49071, France
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAXCWU000000000.1.
            The Sphingomonas sp. CFBP8993 whole genome shotgun (WGS) project
            has the project accession NZ_JAXCWU000000000.  This version of the
            project (01) has the accession number NZ_JAXCWU010000000, and
            consists of sequences JAXCWU010000001-JAXCWU010000017.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: JAN-2022
            Assembly Method        :: SPAdes v. 3.15.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 313.734102504775x
            Sequencing Technology  :: DNBseq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_034044895.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:40:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,524
            CDSs (total)                      :: 3,467
            Genes (coding)                    :: 3,440
            CDSs (with protein)               :: 3,440
            Genes (RNA)                       :: 57
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 51
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 27
            CDSs (without protein)            :: 27
            Pseudo Genes (ambiguous residues) :: 0 of 27
            Pseudo Genes (frameshifted)       :: 14 of 27
            Pseudo Genes (incomplete)         :: 20 of 27
            Pseudo Genes (internal stop)      :: 3 of 27
            Pseudo Genes (multiple problems)  :: 9 of 27
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3824795
                     /organism="Sphingomonas sp. CFBP8993"
                     /mol_type="genomic DNA"
                     /strain="CFBP8993"
                     /isolation_source="seedling"
                     /host="Phaseolus vulgaris"
                     /culture_collection="CIRM-CFBP:CFBP8993"
                     /db_xref="taxon:3096526"
                     /geo_loc_name="France: Brain sur l'Authion,
                     Maine-et-Loire"
                     /collection_date="2021-01"
                     /genotype="Linex"
WGS         JAXCWU010000001-JAXCWU010000017
WGS_SCAFLD  NZ_JAXCWU010000001-NZ_JAXCWU010000017
//
LOCUS       NZ_JBWBUC010000000   2380766 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Rothia sp. QJM3NY_36, whole genome shotgun sequencing project.
ACCESSION   NZ_JBWBUC000000000
VERSION     NZ_JBWBUC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449779
            Assembly: GCF_056173115.1
KEYWORDS    WGS; RefSeq.
SOURCE      Rothia sp. QJM3NY_36
  ORGANISM  Rothia sp. QJM3NY_36
            Bacteria; Bacillati; Actinomycetota; Actinomycetes; Micrococcales;
            Micrococcaceae; Rothia.
REFERENCE   1  (bases 1 to 2380766)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2380766)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBUC000000000.1.
            The Rothia sp. QJM3NY_36 whole genome shotgun (WGS) project has the
            project accession NZ_JBWBUC000000000.  This version of the project
            (01) has the accession number NZ_JBWBUC010000000, and consists of
            sequence JBWBUC010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 104.6x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173115.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:34:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,132
            CDSs (total)                      :: 2,072
            Genes (coding)                    :: 2,044
            CDSs (with protein)               :: 2,044
            Genes (RNA)                       :: 60
            rRNAs                             :: 4, 3, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 3, 3 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 7 of 28
            Pseudo Genes (incomplete)         :: 20 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 4 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2380766
                     /organism="Rothia sp. QJM3NY_36"
                     /mol_type="genomic DNA"
                     /strain="QJM3NY_36"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569838"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBUC010000001
WGS_SCAFLD  NZ_CM149658
//
LOCUS       NZ_JBWBUA010000000   3957637 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Solibacillus sp. iso_87, whole genome shotgun sequencing project.
ACCESSION   NZ_JBWBUA000000000
VERSION     NZ_JBWBUA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449781
            Assembly: GCF_056173085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Solibacillus sp. iso_87
  ORGANISM  Solibacillus sp. iso_87
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Caryophanaceae; Solibacillus.
REFERENCE   1  (bases 1 to 3957637)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3957637)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBUA000000000.1.
            The Solibacillus sp. iso_87 whole genome shotgun (WGS) project has
            the project accession NZ_JBWBUA000000000.  This version of the
            project (01) has the accession number NZ_JBWBUA010000000, and
            consists of sequences JBWBUA010000001-JBWBUA010000002.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 181.4x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173085.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:43:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,048
            CDSs (total)                      :: 3,891
            Genes (coding)                    :: 3,829
            CDSs (with protein)               :: 3,829
            Genes (RNA)                       :: 157
            rRNAs                             :: 12, 12, 12 (5S, 16S, 23S)
            complete rRNAs                    :: 12, 12, 12 (5S, 16S, 23S)
            tRNAs                             :: 116
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 62
            CDSs (without protein)            :: 62
            Pseudo Genes (ambiguous residues) :: 0 of 62
            Pseudo Genes (frameshifted)       :: 22 of 62
            Pseudo Genes (incomplete)         :: 43 of 62
            Pseudo Genes (internal stop)      :: 12 of 62
            Pseudo Genes (multiple problems)  :: 14 of 62
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3957637
                     /organism="Solibacillus sp. iso_87"
                     /mol_type="genomic DNA"
                     /strain="iso_87"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569840"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBUA010000001-JBWBUA010000002
WGS_SCAFLD  NZ_CM149656
WGS_SCAFLD  NZ_JBWBUA010000002
//
LOCUS       NZ_JBAFUD010000000   4033766 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae strain 18-VB00197, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBAFUD000000000
VERSION     NZ_JBAFUD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37977884
            Assembly: GCF_037462915.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4033766)
  AUTHORS   Fleischmann,S.
  TITLE     NOVC from German coastal regions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4033766)
  AUTHORS   Fleischmann,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JAN-2024) School of Veterinary Medicine; Institute of
            Food Safety and Food Hygiene, Freie Universitaet Berlin, Koenigsweg
            69, Berlin 14163, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAFUD000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JBAFUD000000000.  This version of the project
            (01) has the accession number NZ_JBAFUD010000000, and consists of
            sequences JBAFUD010000001-JBAFUD010000209.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 11x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037462915.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:30:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,790
            CDSs (total)                      :: 3,672
            Genes (coding)                    :: 3,560
            CDSs (with protein)               :: 3,560
            Genes (RNA)                       :: 118
            rRNAs                             :: 6, 6, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1 (5S, 16S)
            partial rRNAs                     :: 5, 9 (16S, 23S)
            tRNAs                             :: 93
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 112
            CDSs (without protein)            :: 112
            Pseudo Genes (ambiguous residues) :: 0 of 112
            Pseudo Genes (frameshifted)       :: 27 of 112
            Pseudo Genes (incomplete)         :: 88 of 112
            Pseudo Genes (internal stop)      :: 10 of 112
            Pseudo Genes (multiple problems)  :: 12 of 112
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4033766
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /strain="18-VB00197"
                     /serotype="non-O1/non-O139"
                     /isolation_source="water"
                     /db_xref="taxon:666"
                     /geo_loc_name="Germany: Baltic Sea"
                     /collection_date="2017-07-24"
WGS         JBAFUD010000001-JBAFUD010000209
WGS_SCAFLD  NZ_JBAFUD010000001-NZ_JBAFUD010000209
//
LOCUS       NZ_JBAFUE010000000   4076276 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae strain 18-VB00111, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBAFUE000000000
VERSION     NZ_JBAFUE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37977881
            Assembly: GCF_037462975.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4076276)
  AUTHORS   Fleischmann,S.
  TITLE     NOVC from German coastal regions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4076276)
  AUTHORS   Fleischmann,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-JAN-2024) School of Veterinary Medicine; Institute of
            Food Safety and Food Hygiene, Freie Universitaet Berlin, Koenigsweg
            69, Berlin 14163, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAFUE000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JBAFUE000000000.  This version of the project
            (01) has the accession number NZ_JBAFUE010000000, and consists of
            sequences JBAFUE010000001-JBAFUE010000191.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 23x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037462975.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:39:22
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,791
            CDSs (total)                      :: 3,680
            Genes (coding)                    :: 3,579
            CDSs (with protein)               :: 3,579
            Genes (RNA)                       :: 111
            rRNAs                             :: 6, 12, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1 (5S, 23S)
            partial rRNAs                     :: 12 (16S)
            tRNAs                             :: 88
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 101
            CDSs (without protein)            :: 101
            Pseudo Genes (ambiguous residues) :: 0 of 101
            Pseudo Genes (frameshifted)       :: 25 of 101
            Pseudo Genes (incomplete)         :: 72 of 101
            Pseudo Genes (internal stop)      :: 11 of 101
            Pseudo Genes (multiple problems)  :: 7 of 101
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4076276
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /strain="18-VB00111"
                     /serotype="non-O1/non-O139"
                     /isolation_source="water"
                     /db_xref="taxon:666"
                     /geo_loc_name="Germany: North Sea"
                     /collection_date="2017-08-15"
WGS         JBAFUE010000001-JBAFUE010000191
WGS_SCAFLD  NZ_JBAFUE010000001-NZ_JBAFUE010000191
//
LOCUS       NZ_JAYDCE010000000   4064028 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae strain 18-VB00405, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAYDCE000000000
VERSION     NZ_JAYDCE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37977892
            Assembly: GCF_037462765.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4064028)
  AUTHORS   Fleischmann,S.
  TITLE     NOVC from German coastal regions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4064028)
  AUTHORS   Fleischmann,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) School of Veterinary Medicine; Institute of
            Food Safety and Food Hygiene, Freie Universitaet Berlin, Koenigsweg
            69, Berlin 14163, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAYDCE000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JAYDCE000000000.  This version of the project
            (01) has the accession number NZ_JAYDCE010000000, and consists of
            sequences JAYDCE010000001-JAYDCE010000158.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 9x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037462765.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:38:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,783
            CDSs (total)                      :: 3,665
            Genes (coding)                    :: 3,587
            CDSs (with protein)               :: 3,587
            Genes (RNA)                       :: 118
            rRNAs                             :: 10, 8, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 6 (5S)
            partial rRNAs                     :: 4, 8, 5 (5S, 16S, 23S)
            tRNAs                             :: 91
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 78
            CDSs (without protein)            :: 78
            Pseudo Genes (ambiguous residues) :: 0 of 78
            Pseudo Genes (frameshifted)       :: 28 of 78
            Pseudo Genes (incomplete)         :: 45 of 78
            Pseudo Genes (internal stop)      :: 11 of 78
            Pseudo Genes (multiple problems)  :: 6 of 78
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4064028
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /strain="18-VB00405"
                     /serotype="non-O1/non-O139"
                     /isolation_source="water"
                     /db_xref="taxon:666"
                     /geo_loc_name="Germany: Baltic Sea"
                     /collection_date="2018-05-28"
WGS         JAYDCE010000001-JAYDCE010000158
WGS_SCAFLD  NZ_JAYDCE010000001-NZ_JAYDCE010000158
//
LOCUS       NZ_JBAFTX010000000   4015354 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae strain 18-VB00536, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBAFTX000000000
VERSION     NZ_JBAFTX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37977893
            Assembly: GCF_037462735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4015354)
  AUTHORS   Fleischmann,S.
  TITLE     NOVC from German coastal regions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4015354)
  AUTHORS   Fleischmann,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JAN-2024) School of Veterinary Medicine; Institute of
            Food Safety and Food Hygiene, Freie Universitaet Berlin, Koenigsweg
            69, Berlin 14163, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAFTX000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JBAFTX000000000.  This version of the project
            (01) has the accession number NZ_JBAFTX010000000, and consists of
            sequences JBAFTX010000001-JBAFTX010000196.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 12x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037462735.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:38:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,811
            CDSs (total)                      :: 3,685
            Genes (coding)                    :: 3,599
            CDSs (with protein)               :: 3,599
            Genes (RNA)                       :: 126
            rRNAs                             :: 10, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 1 (5S, 16S)
            partial rRNAs                     :: 2, 7, 8 (5S, 16S, 23S)
            tRNAs                             :: 96
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 86
            CDSs (without protein)            :: 86
            Pseudo Genes (ambiguous residues) :: 0 of 86
            Pseudo Genes (frameshifted)       :: 16 of 86
            Pseudo Genes (incomplete)         :: 70 of 86
            Pseudo Genes (internal stop)      :: 10 of 86
            Pseudo Genes (multiple problems)  :: 9 of 86
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4015354
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /strain="18-VB00536"
                     /serotype="non-O1/non-O139"
                     /isolation_source="water"
                     /db_xref="taxon:666"
                     /geo_loc_name="Germany: Baltic Sea"
                     /collection_date="2018-06-11"
WGS         JBAFTX010000001-JBAFTX010000196
WGS_SCAFLD  NZ_JBAFTX010000001-NZ_JBAFTX010000196
//
LOCUS       NZ_JACMIA010000000   5129558 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Stappia quadratibracata strain 28M-7, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JACMIA000000000
VERSION     NZ_JACMIA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN15802511
            Assembly: GCF_014252955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stappia quadratibracata
  ORGANISM  Stappia quadratibracata
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Hyphomicrobiales; Stappiaceae; Stappia.
REFERENCE   1  (bases 1 to 5129558)
  AUTHORS   Williams,S.E., Stennett,H.L., Devine,A.J., Song,Z., Back,C.R.,
            Wang,L., Mantell,J., Neal,C., Jepson,M.A., Essex-Lopresti,A.E.,
            Sellars,J.D., Stach,J.E.M., Willis,C.L., Curnow,P. and Race,P.R.
  TITLE     OSMAC guided bioprospecting of Atlantic sponges reveals novel
            bacterial species and evidence for the antimicrobial thiazole
            alkaloid agrochelin II
  JOURNAL   Appl Environ Microbiol 92 (3), e0187725 (2026)
   PUBMED   41700857
REFERENCE   2  (bases 1 to 5129558)
  AUTHORS   Stennett,H.L. and Williams,S.E.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-AUG-2020) Biochemistry, University of Bristol,
            Department of Biochemistry, Biomedical Sciences Building,
            University Walk, Bristol BS8 1TD, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JACMIA000000000.1.
            The Stappia quadratibracata whole genome shotgun (WGS) project has
            the project accession NZ_JACMIA000000000.  This version of the
            project (01) has the accession number NZ_JACMIA010000000, and
            consists of sequences JACMIA010000001-JACMIA010000011.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Paul Race, University of
            Bristol, BS8 1TD.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: AUG-2019
            Assembly Method        :: Unicycler v. 0.4.6
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 96.0x
            Sequencing Technology  :: Illumina MiSeq; Oxford Nanopore MinION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_014252955.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:50:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,665
            CDSs (total)                      :: 4,607
            Genes (coding)                    :: 4,576
            CDSs (with protein)               :: 4,576
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 31
            CDSs (without protein)            :: 31
            Pseudo Genes (ambiguous residues) :: 0 of 31
            Pseudo Genes (frameshifted)       :: 4 of 31
            Pseudo Genes (incomplete)         :: 26 of 31
            Pseudo Genes (internal stop)      :: 4 of 31
            Pseudo Genes (multiple problems)  :: 3 of 31
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5129558
                     /organism="Stappia quadratibracata"
                     /mol_type="genomic DNA"
                     /strain="28M-7"
                     /isolation_source="demosponge"
                     /type_material="type strain of Stappia quadratibracata"
                     /db_xref="taxon:2762596"
                     /geo_loc_name="Atlantic Ocean"
                     /lat_lon="5.63 N 26.96 W"
                     /collection_date="2015"
WGS         JACMIA010000001-JACMIA010000011
WGS_SCAFLD  NZ_JACMIA010000001-NZ_JACMIA010000011
//
LOCUS       NZ_JAYDBX010000000   4042245 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae strain 18-VB00598, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAYDBX000000000
VERSION     NZ_JAYDBX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37977905
            Assembly: GCF_037462505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4042245)
  AUTHORS   Fleischmann,S.
  TITLE     NOVC from German coastal regions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4042245)
  AUTHORS   Fleischmann,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) School of Veterinary Medicine; Institute of
            Food Safety and Food Hygiene, Freie Universitaet Berlin, Koenigsweg
            69, Berlin 14163, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAYDBX000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JAYDBX000000000.  This version of the project
            (01) has the accession number NZ_JAYDBX010000000, and consists of
            sequences JAYDBX010000001-JAYDBX010000207.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037462505.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:34:24
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,799
            CDSs (total)                      :: 3,679
            Genes (coding)                    :: 3,566
            CDSs (with protein)               :: 3,566
            Genes (RNA)                       :: 120
            rRNAs                             :: 7, 9, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 7 (5S)
            partial rRNAs                     :: 9, 9 (16S, 23S)
            tRNAs                             :: 91
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 113
            CDSs (without protein)            :: 113
            Pseudo Genes (ambiguous residues) :: 0 of 113
            Pseudo Genes (frameshifted)       :: 29 of 113
            Pseudo Genes (incomplete)         :: 87 of 113
            Pseudo Genes (internal stop)      :: 10 of 113
            Pseudo Genes (multiple problems)  :: 12 of 113
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4042245
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /strain="18-VB00598"
                     /serotype="non-O1/non-O139"
                     /isolation_source="water"
                     /db_xref="taxon:666"
                     /geo_loc_name="Germany: Baltic Sea"
                     /collection_date="2018-07-23"
WGS         JAYDBX010000001-JAYDBX010000207
WGS_SCAFLD  NZ_JAYDBX010000001-NZ_JAYDBX010000207
//
LOCUS       NZ_JAYDCF010000000   4011852 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae strain 18-VB00278, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAYDCF000000000
VERSION     NZ_JAYDCF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37977889
            Assembly: GCF_037462815.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4011852)
  AUTHORS   Fleischmann,S.
  TITLE     NOVC from German coastal regions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4011852)
  AUTHORS   Fleischmann,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) School of Veterinary Medicine; Institute of
            Food Safety and Food Hygiene, Freie Universitaet Berlin, Koenigsweg
            69, Berlin 14163, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAYDCF000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JAYDCF000000000.  This version of the project
            (01) has the accession number NZ_JAYDCF010000000, and consists of
            sequences JAYDCF010000001-JAYDCF010000067.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 9x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037462815.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:35:36
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,692
            CDSs (total)                      :: 3,570
            Genes (coding)                    :: 3,521
            CDSs (with protein)               :: 3,521
            Genes (RNA)                       :: 122
            rRNAs                             :: 8, 11, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6 (5S)
            partial rRNAs                     :: 2, 11, 6 (5S, 16S, 23S)
            tRNAs                             :: 93
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 49
            CDSs (without protein)            :: 49
            Pseudo Genes (ambiguous residues) :: 0 of 49
            Pseudo Genes (frameshifted)       :: 16 of 49
            Pseudo Genes (incomplete)         :: 26 of 49
            Pseudo Genes (internal stop)      :: 16 of 49
            Pseudo Genes (multiple problems)  :: 5 of 49
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4011852
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /strain="18-VB00278"
                     /serotype="non-O1/non-O139"
                     /isolation_source="sediment"
                     /db_xref="taxon:666"
                     /geo_loc_name="Germany: Baltic Sea"
                     /collection_date="2017-08-21"
WGS         JAYDCF010000001-JAYDCF010000067
WGS_SCAFLD  NZ_JAYDCF010000001-NZ_JAYDCF010000067
//
LOCUS       NZ_PZHW01000000      2270208 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus hominis strain SNUC 5746, whole genome shotgun
            sequencing project.
ACCESSION   NZ_PZHW00000000
VERSION     NZ_PZHW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06173082
            Assembly: GCF_003042305.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus hominis
  ORGANISM  Staphylococcus hominis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2270208)
  AUTHORS   Naushad,S., Barkema,H.W., Luby,C., Condas,L.A., Nobrega,D.B.,
            Carson,D.A. and De Buck,J.
  TITLE     Comprehensive Phylogenetic Analysis of Bovine Non-aureus
            Staphylococci Species Based on Whole-Genome Sequencing
  JOURNAL   Front Microbiol 7, 1990 (2016)
   PUBMED   28066335
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2270208)
  AUTHORS   Naushad,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-MAR-2018) Production Animal Health, University of
            Calgary, 3330 Hospital Drive NW, Calgary, Alberta T2N 4N1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PZHW00000000.1.
            The Staphylococcus hominis whole genome shotgun (WGS) project has
            the project accession NZ_PZHW00000000.  This version of the project
            (01) has the accession number NZ_PZHW01000000, and consists of
            sequences PZHW01000001-PZHW01000147.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 47x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003042305.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:17:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,367
            CDSs (total)                      :: 2,274
            Genes (coding)                    :: 2,183
            CDSs (with protein)               :: 2,183
            Genes (RNA)                       :: 93
            rRNAs                             :: 8, 12, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 7 (5S)
            partial rRNAs                     :: 1, 12, 8 (5S, 16S, 23S)
            tRNAs                             :: 61
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 91
            CDSs (without protein)            :: 91
            Pseudo Genes (ambiguous residues) :: 0 of 91
            Pseudo Genes (frameshifted)       :: 22 of 91
            Pseudo Genes (incomplete)         :: 73 of 91
            Pseudo Genes (internal stop)      :: 13 of 91
            Pseudo Genes (multiple problems)  :: 16 of 91
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2270208
                     /organism="Staphylococcus hominis"
                     /mol_type="genomic DNA"
                     /strain="SNUC 5746"
                     /isolation_source="Herd 324"
                     /host="Bos taurus"
                     /db_xref="taxon:1290"
                     /geo_loc_name="Canada: Quebec"
                     /collection_date="2008-02-27"
                     /collected_by="Canadian Bovine Mastitis Research Network
                     (CBMRN)"
WGS         PZHW01000001-PZHW01000147
WGS_SCAFLD  NZ_PZHW01000001-NZ_PZHW01000147
//
LOCUS       NZ_PZIB01000000      2265448 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus hominis strain SNUC 2444, whole genome shotgun
            sequencing project.
ACCESSION   NZ_PZIB00000000
VERSION     NZ_PZIB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06173075
            Assembly: GCF_003042465.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus hominis
  ORGANISM  Staphylococcus hominis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2265448)
  AUTHORS   Naushad,S., Barkema,H.W., Luby,C., Condas,L.A., Nobrega,D.B.,
            Carson,D.A. and De Buck,J.
  TITLE     Comprehensive Phylogenetic Analysis of Bovine Non-aureus
            Staphylococci Species Based on Whole-Genome Sequencing
  JOURNAL   Front Microbiol 7, 1990 (2016)
   PUBMED   28066335
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2265448)
  AUTHORS   Naushad,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-MAR-2018) Production Animal Health, University of
            Calgary, 3330 Hospital Drive NW, Calgary, Alberta T2N 4N1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PZIB00000000.1.
            The Staphylococcus hominis whole genome shotgun (WGS) project has
            the project accession NZ_PZIB00000000.  This version of the project
            (01) has the accession number NZ_PZIB01000000, and consists of
            sequences PZIB01000001-PZIB01000176.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003042465.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:22:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,314
            CDSs (total)                      :: 2,232
            Genes (coding)                    :: 2,160
            CDSs (with protein)               :: 2,160
            Genes (RNA)                       :: 82
            rRNAs                             :: 7, 9, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 8 (5S, 16S)
            tRNAs                             :: 61
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 72
            CDSs (without protein)            :: 72
            Pseudo Genes (ambiguous residues) :: 0 of 72
            Pseudo Genes (frameshifted)       :: 19 of 72
            Pseudo Genes (incomplete)         :: 53 of 72
            Pseudo Genes (internal stop)      :: 15 of 72
            Pseudo Genes (multiple problems)  :: 14 of 72
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2265448
                     /organism="Staphylococcus hominis"
                     /mol_type="genomic DNA"
                     /strain="SNUC 2444"
                     /isolation_source="Herd 416"
                     /host="Bos taurus"
                     /db_xref="taxon:1290"
                     /geo_loc_name="Canada: Atlantic"
                     /collection_date="2007-04-03"
                     /collected_by="Canadian Bovine Mastitis Research Network
                     (CBMRN)"
WGS         PZIB01000001-PZIB01000176
WGS_SCAFLD  NZ_PZIB01000001-NZ_PZIB01000176
//
LOCUS       NZ_JBWCAH010000000   4192039 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae isolate VC0968, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWCAH000000000
VERSION     NZ_JBWCAH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56501516
            Assembly: GCF_056175165.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4192039)
  AUTHORS   Jia,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAR-2026) Jiaxing Key Laboratory of Pathogenic
            Microbiology, JXCDC, Wenqiao road 486, Jiaxing, Zhejiang 314050,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWCAH000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JBWCAH000000000.  This version of the project
            (01) has the accession number NZ_JBWCAH010000000, and consists of
            sequences JBWCAH010000001-JBWCAH010000065.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.16
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 111x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056175165.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:43:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,870
            CDSs (total)                      :: 3,797
            Genes (coding)                    :: 3,745
            CDSs (with protein)               :: 3,745
            Genes (RNA)                       :: 73
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 65
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 52
            CDSs (without protein)            :: 52
            Pseudo Genes (ambiguous residues) :: 0 of 52
            Pseudo Genes (frameshifted)       :: 15 of 52
            Pseudo Genes (incomplete)         :: 38 of 52
            Pseudo Genes (internal stop)      :: 6 of 52
            Pseudo Genes (multiple problems)  :: 5 of 52
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4192039
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /serovar="O1"
                     /isolate="VC0968"
                     /isolation_source="environmental"
                     /db_xref="taxon:666"
                     /geo_loc_name="China"
                     /lat_lon="30.75 N 120.75 E"
                     /collection_date="2024"
                     /collected_by="JXCDC"
WGS         JBWCAH010000001-JBWCAH010000065
WGS_SCAFLD  NZ_JBWCAH010000001-NZ_JBWCAH010000065
//
LOCUS       NZ_JAACJI010000000   1772917 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Streptococcus pyogenes strain GCH124, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAACJI000000000
VERSION     NZ_JAACJI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13899304
            Assembly: GCF_009938925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus pyogenes
  ORGANISM  Streptococcus pyogenes
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1772917)
  AUTHORS   Lee,S. and Kim,S.
  TITLE     Comparative genome analysis of pathogenic Streptococcus pyogenes
            strain compared to nonpathogenic strain
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1772917)
  AUTHORS   Lee,S. and Kim,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JAN-2020) Department of Laboratory Medicine,
            Gyeongsang National University Changwon Hospital, 11,
            Samjeongja-ro, Seongsan-gu, Changwon 51472, Korea, Republic of
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAACJI000000000.1.
            The Streptococcus pyogenes whole genome shotgun (WGS) project has
            the project accession NZ_JAACJI000000000.  This version of the
            project (01) has the accession number NZ_JAACJI010000000, and
            consists of sequences JAACJI010000001-JAACJI010000011.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Department of Laboratory
            Medicine, Gyeongsang National University Changwon Hospital.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.10.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 422.8x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009938925.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:37:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,742
            CDSs (total)                      :: 1,692
            Genes (coding)                    :: 1,608
            CDSs (with protein)               :: 1,608
            Genes (RNA)                       :: 50
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 41
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 84
            CDSs (without protein)            :: 84
            Pseudo Genes (ambiguous residues) :: 0 of 84
            Pseudo Genes (frameshifted)       :: 34 of 84
            Pseudo Genes (incomplete)         :: 49 of 84
            Pseudo Genes (internal stop)      :: 27 of 84
            Pseudo Genes (multiple problems)  :: 21 of 84
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1772917
                     /organism="Streptococcus pyogenes"
                     /mol_type="genomic DNA"
                     /strain="GCH124"
                     /isolation_source="throat swab"
                     /host="Homo sapiens"
                     /db_xref="taxon:1314"
                     /geo_loc_name="South Korea:Jinju"
                     /collection_date="2002-01-01"
WGS         JAACJI010000001-JAACJI010000011
WGS_SCAFLD  NZ_JAACJI010000001-NZ_JAACJI010000011
//
LOCUS       NZ_JBWBTX010000000   7872998 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Streptomyces sp. 63XJN7_1_ISO-PGPR-S23-121, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBWBTX000000000
VERSION     NZ_JBWBTX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449791
            Assembly: GCF_056173025.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces sp. 63XJN7_1_ISO-PGPR-S23-121
  ORGANISM  Streptomyces sp. 63XJN7_1_ISO-PGPR-S23-121
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 7872998)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7872998)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBTX000000000.1.
            The Streptomyces sp. 63XJN7_1_ISO-PGPR-S23-121 whole genome shotgun
            (WGS) project has the project accession NZ_JBWBTX000000000.  This
            version of the project (01) has the accession number
            NZ_JBWBTX010000000, and consists of sequence JBWBTX010000001.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 86.6x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056173025.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 18:29:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,053
            CDSs (total)                      :: 6,966
            Genes (coding)                    :: 6,692
            CDSs (with protein)               :: 6,692
            Genes (RNA)                       :: 87
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 274
            CDSs (without protein)            :: 274
            Pseudo Genes (ambiguous residues) :: 0 of 274
            Pseudo Genes (frameshifted)       :: 134 of 274
            Pseudo Genes (incomplete)         :: 176 of 274
            Pseudo Genes (internal stop)      :: 14 of 274
            Pseudo Genes (multiple problems)  :: 47 of 274
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7872998
                     /organism="Streptomyces sp. 63XJN7_1_ISO-PGPR-S23-121"
                     /mol_type="genomic DNA"
                     /strain="63XJN7_1_ISO-PGPR-S23-121"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569850"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBTX010000001
WGS_SCAFLD  NZ_CM149653
//
LOCUS       NZ_JBAFUG010000000   4066998 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae strain 18-VB00104, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBAFUG000000000
VERSION     NZ_JBAFUG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37977879
            Assembly: GCF_037463005.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4066998)
  AUTHORS   Fleischmann,S.
  TITLE     NOVC from German coastal regions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4066998)
  AUTHORS   Fleischmann,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-JAN-2024) School of Veterinary Medicine; Institute of
            Food Safety and Food Hygiene, Freie Universitaet Berlin, Koenigsweg
            69, Berlin 14163, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAFUG000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JBAFUG000000000.  This version of the project
            (01) has the accession number NZ_JBAFUG010000000, and consists of
            sequences JBAFUG010000001-JBAFUG010000182.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 26x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037463005.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:31:33
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,779
            CDSs (total)                      :: 3,665
            Genes (coding)                    :: 3,569
            CDSs (with protein)               :: 3,569
            Genes (RNA)                       :: 114
            rRNAs                             :: 7, 11, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1 (5S, 23S)
            partial rRNAs                     :: 11 (16S)
            tRNAs                             :: 91
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 96
            CDSs (without protein)            :: 96
            Pseudo Genes (ambiguous residues) :: 0 of 96
            Pseudo Genes (frameshifted)       :: 23 of 96
            Pseudo Genes (incomplete)         :: 70 of 96
            Pseudo Genes (internal stop)      :: 11 of 96
            Pseudo Genes (multiple problems)  :: 8 of 96
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4066998
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /strain="18-VB00104"
                     /serotype="non-O1/non-O139"
                     /isolation_source="water"
                     /db_xref="taxon:666"
                     /geo_loc_name="Germany: North Sea"
                     /collection_date="2017-08-15"
WGS         JBAFUG010000001-JBAFUG010000182
WGS_SCAFLD  NZ_JBAFUG010000001-NZ_JBAFUG010000182
//
LOCUS       NZ_PZDB01000000      2418953 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus capitis strain SNUC 2784, whole genome shotgun
            sequencing project.
ACCESSION   NZ_PZDB00000000
VERSION     NZ_PZDB00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06172851
            Assembly: GCF_003040615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus capitis
  ORGANISM  Staphylococcus capitis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2418953)
  AUTHORS   Naushad,S., Barkema,H.W., Luby,C., Condas,L.A., Nobrega,D.B.,
            Carson,D.A. and De Buck,J.
  TITLE     Comprehensive Phylogenetic Analysis of Bovine Non-aureus
            Staphylococci Species Based on Whole-Genome Sequencing
  JOURNAL   Front Microbiol 7, 1990 (2016)
   PUBMED   28066335
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2418953)
  AUTHORS   Naushad,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-MAR-2018) Production Animal Health, University of
            Calgary, 3330 Hospital Drive NW, Calgary, Alberta T2N 4N1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PZDB00000000.1.
            The Staphylococcus capitis whole genome shotgun (WGS) project has
            the project accession NZ_PZDB00000000.  This version of the project
            (01) has the accession number NZ_PZDB01000000, and consists of
            sequences PZDB01000001-PZDB01000132.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003040615.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:28:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,389
            CDSs (total)                      :: 2,302
            Genes (coding)                    :: 2,246
            CDSs (with protein)               :: 2,246
            Genes (RNA)                       :: 87
            rRNAs                             :: 7, 6, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1 (5S, 16S)
            partial rRNAs                     :: 5, 8 (16S, 23S)
            tRNAs                             :: 62
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 56
            CDSs (without protein)            :: 56
            Pseudo Genes (ambiguous residues) :: 0 of 56
            Pseudo Genes (frameshifted)       :: 16 of 56
            Pseudo Genes (incomplete)         :: 41 of 56
            Pseudo Genes (internal stop)      :: 11 of 56
            Pseudo Genes (multiple problems)  :: 10 of 56
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2418953
                     /organism="Staphylococcus capitis"
                     /mol_type="genomic DNA"
                     /strain="SNUC 2784"
                     /isolation_source="Herd 409"
                     /host="Bos taurus"
                     /db_xref="taxon:29388"
                     /geo_loc_name="Canada: Atlantic"
                     /collection_date="2007-04-05"
                     /collected_by="Canadian Bovine Mastitis Research Network
                     (CBMRN)"
WGS         PZDB01000001-PZDB01000132
WGS_SCAFLD  NZ_PZDB01000001-NZ_PZDB01000132
//
LOCUS       NZ_PDCL01000000      7875407 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Streptomyces filamentosus strain ATCC 23958, whole genome shotgun
            sequencing project.
ACCESSION   NZ_PDCL00000000
VERSION     NZ_PDCL00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN07709102
            Assembly: GCF_008634015.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces filamentosus (Streptomyces roseosporus)
  ORGANISM  Streptomyces filamentosus
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 7875407)
  AUTHORS   Lee,N. and Cho,B.-K.
  TITLE     Streptomyces genome completion
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7875407)
  AUTHORS   Lee,N. and Cho,B.-K.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2018) Biological Science, KAIST, 291 Daehak-ro,
            Daejeon 34141, South Korea
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PDCL00000000.1.
            The Streptomyces filamentosus whole genome shotgun (WGS) project
            has the project accession NZ_PDCL00000000.  This version of the
            project (01) has the accession number NZ_PDCL01000000, and consists
            of sequences PDCL01000001-PDCL01000002.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: HGAP v. 2.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_008634015.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:19:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,190
            CDSs (total)                      :: 7,092
            Genes (coding)                    :: 6,954
            CDSs (with protein)               :: 6,954
            Genes (RNA)                       :: 98
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 71
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 138
            CDSs (without protein)            :: 138
            Pseudo Genes (ambiguous residues) :: 0 of 138
            Pseudo Genes (frameshifted)       :: 53 of 138
            Pseudo Genes (incomplete)         :: 98 of 138
            Pseudo Genes (internal stop)      :: 9 of 138
            Pseudo Genes (multiple problems)  :: 19 of 138
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7875407
                     /organism="Streptomyces filamentosus"
                     /mol_type="genomic DNA"
                     /strain="ATCC 23958"
                     /isolation_source="soil"
                     /culture_collection="ATCC:23958"
                     /type_material="type strain of Streptomyces roseosporus"
                     /db_xref="taxon:67294"
WGS         PDCL01000001-PDCL01000002
WGS_SCAFLD  NZ_PDCL01000001-NZ_PDCL01000002
//
LOCUS       NZ_JBWCAE010000000   4185919 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae isolate VC0901, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWCAE000000000
VERSION     NZ_JBWCAE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56501513
            Assembly: GCF_056175245.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4185919)
  AUTHORS   Jia,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAR-2026) Jiaxing Key Laboratory of Pathogenic
            Microbiology, JXCDC, Wenqiao road 486, Jiaxing, Zhejiang 314050,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWCAE000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JBWCAE000000000.  This version of the project
            (01) has the accession number NZ_JBWCAE010000000, and consists of
            sequences JBWCAE010000001-JBWCAE010000122.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.13
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 108x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056175245.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:39:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,869
            CDSs (total)                      :: 3,826
            Genes (coding)                    :: 3,739
            CDSs (with protein)               :: 3,739
            Genes (RNA)                       :: 43
            rRNAs                             :: 2, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 1 (5S, 23S)
            tRNAs                             :: 36
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 87
            CDSs (without protein)            :: 87
            Pseudo Genes (ambiguous residues) :: 0 of 87
            Pseudo Genes (frameshifted)       :: 14 of 87
            Pseudo Genes (incomplete)         :: 75 of 87
            Pseudo Genes (internal stop)      :: 5 of 87
            Pseudo Genes (multiple problems)  :: 5 of 87
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4185919
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /serovar="O1"
                     /isolate="VC0901"
                     /isolation_source="environmental"
                     /db_xref="taxon:666"
                     /geo_loc_name="China"
                     /lat_lon="30.75 N 120.75 E"
                     /collection_date="2024"
                     /collected_by="JXCDC"
WGS         JBWCAE010000001-JBWCAE010000122
WGS_SCAFLD  NZ_JBWCAE010000001-NZ_JBWCAE010000122
//
LOCUS       NZ_PZIA01000000      2297219 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus hominis strain SNUC 2620, whole genome shotgun
            sequencing project.
ACCESSION   NZ_PZIA00000000
VERSION     NZ_PZIA00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN06173076
            Assembly: GCF_003042385.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus hominis
  ORGANISM  Staphylococcus hominis
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2297219)
  AUTHORS   Naushad,S., Barkema,H.W., Luby,C., Condas,L.A., Nobrega,D.B.,
            Carson,D.A. and De Buck,J.
  TITLE     Comprehensive Phylogenetic Analysis of Bovine Non-aureus
            Staphylococci Species Based on Whole-Genome Sequencing
  JOURNAL   Front Microbiol 7, 1990 (2016)
   PUBMED   28066335
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2297219)
  AUTHORS   Naushad,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-MAR-2018) Production Animal Health, University of
            Calgary, 3330 Hospital Drive NW, Calgary, Alberta T2N 4N1, Canada
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            PZIA00000000.1.
            The Staphylococcus hominis whole genome shotgun (WGS) project has
            the project accession NZ_PZIA00000000.  This version of the project
            (01) has the accession number NZ_PZIA01000000, and consists of
            sequences PZIA01000001-PZIA01000146.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 49x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_003042385.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:22:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,337
            CDSs (total)                      :: 2,260
            Genes (coding)                    :: 2,178
            CDSs (with protein)               :: 2,178
            Genes (RNA)                       :: 77
            rRNAs                             :: 7, 6, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 5 (5S, 16S)
            tRNAs                             :: 59
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 23 of 82
            Pseudo Genes (incomplete)         :: 66 of 82
            Pseudo Genes (internal stop)      :: 14 of 82
            Pseudo Genes (multiple problems)  :: 18 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2297219
                     /organism="Staphylococcus hominis"
                     /mol_type="genomic DNA"
                     /strain="SNUC 2620"
                     /isolation_source="Herd 315"
                     /host="Bos taurus"
                     /db_xref="taxon:1290"
                     /geo_loc_name="Canada: Quebec"
                     /collection_date="2007-04-17"
                     /collected_by="Canadian Bovine Mastitis Research Network
                     (CBMRN)"
WGS         PZIA01000001-PZIA01000146
WGS_SCAFLD  NZ_PZIA01000001-NZ_PZIA01000146
//
LOCUS       NZ_JBWCAJ010000000   4024233 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae isolate VC1026, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWCAJ000000000
VERSION     NZ_JBWCAJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56501518
            Assembly: GCF_056175145.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4024233)
  AUTHORS   Jia,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAR-2026) Jiaxing Key Laboratory of Pathogenic
            Microbiology, JXCDC, Wenqiao road 486, Jiaxing, Zhejiang 314050,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWCAJ000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JBWCAJ000000000.  This version of the project
            (01) has the accession number NZ_JBWCAJ010000000, and consists of
            sequences JBWCAJ010000001-JBWCAJ010000073.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.18
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 113x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056175145.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:37:30
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,682
            CDSs (total)                      :: 3,604
            Genes (coding)                    :: 3,549
            CDSs (with protein)               :: 3,549
            Genes (RNA)                       :: 78
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 3, 1 (16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 55
            CDSs (without protein)            :: 55
            Pseudo Genes (ambiguous residues) :: 0 of 55
            Pseudo Genes (frameshifted)       :: 18 of 55
            Pseudo Genes (incomplete)         :: 33 of 55
            Pseudo Genes (internal stop)      :: 15 of 55
            Pseudo Genes (multiple problems)  :: 10 of 55
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4024233
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /serovar="O1"
                     /isolate="VC1026"
                     /isolation_source="clinical"
                     /db_xref="taxon:666"
                     /geo_loc_name="China"
                     /lat_lon="30.75 N 120.75 E"
                     /collection_date="2024"
                     /collected_by="JXCDC"
WGS         JBWCAJ010000001-JBWCAJ010000073
WGS_SCAFLD  NZ_JBWCAJ010000001-NZ_JBWCAJ010000073
//
LOCUS       NZ_JBSKBS010000000   7264910 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Streptomyces sp. DSM 120436, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBSKBS000000000
VERSION     NZ_JBSKBS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN53303097
            Assembly: GCF_055778765.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces sp. DSM 120436
  ORGANISM  Streptomyces sp. DSM 120436
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 7264910)
  AUTHORS   Hamid,M., Nouioui,I. and Mast,Y.
  TITLE     Streptomyces nubiansis sp. nov. and Streptomyces denigilensis sp.
            nov., two novel actinomycetes isolated from desert and riverine
            soils in Sudan
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7264910)
  AUTHORS   Hamid,M., Nouioui,I. and Mast,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2025) Department of Bioresources for Bioeconomy
            and Health Research, Leibniz Institute, DSMZ, Inhoffenstrasse 7 B,
            Braunschweig 38124, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBSKBS000000000.1.
            The Streptomyces sp. DSM 120436 whole genome shotgun (WGS) project
            has the project accession NZ_JBSKBS000000000.  This version of the
            project (01) has the accession number NZ_JBSKBS010000000, and
            consists of sequences JBSKBS010000001-JBSKBS010000005.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.7
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_055778765.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 08:22:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,492
            CDSs (total)                      :: 6,401
            Genes (coding)                    :: 6,151
            CDSs (with protein)               :: 6,151
            Genes (RNA)                       :: 91
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 250
            CDSs (without protein)            :: 250
            Pseudo Genes (ambiguous residues) :: 0 of 250
            Pseudo Genes (frameshifted)       :: 118 of 250
            Pseudo Genes (incomplete)         :: 189 of 250
            Pseudo Genes (internal stop)      :: 22 of 250
            Pseudo Genes (multiple problems)  :: 75 of 250
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7264910
                     /organism="Streptomyces sp. DSM 120436"
                     /mol_type="genomic DNA"
                     /strain="DSM 120436"
                     /isolation_source="soil"
                     /culture_collection="DSM:120436"
                     /db_xref="taxon:3470958"
                     /geo_loc_name="Sudan"
                     /collection_date="2016"
WGS         JBSKBS010000001-JBSKBS010000005
WGS_SCAFLD  NZ_JBSKBS010000001-NZ_JBSKBS010000005
//
LOCUS       NZ_JBWCAF010000000   4186596 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae isolate VC0902, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBWCAF000000000
VERSION     NZ_JBWCAF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN56501514
            Assembly: GCF_056175225.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4186596)
  AUTHORS   Jia,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAR-2026) Jiaxing Key Laboratory of Pathogenic
            Microbiology, JXCDC, Wenqiao road 486, Jiaxing, Zhejiang 314050,
            China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWCAF000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JBWCAF000000000.  This version of the project
            (01) has the accession number NZ_JBWCAF010000000, and consists of
            sequences JBWCAF010000001-JBWCAF010000128.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.14
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 109x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056175225.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 17:41:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,883
            CDSs (total)                      :: 3,830
            Genes (coding)                    :: 3,745
            CDSs (with protein)               :: 3,745
            Genes (RNA)                       :: 53
            rRNAs                             :: 3, 1 (5S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 1 (5S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 85
            CDSs (without protein)            :: 85
            Pseudo Genes (ambiguous residues) :: 0 of 85
            Pseudo Genes (frameshifted)       :: 14 of 85
            Pseudo Genes (incomplete)         :: 73 of 85
            Pseudo Genes (internal stop)      :: 5 of 85
            Pseudo Genes (multiple problems)  :: 5 of 85
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4186596
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /serovar="O1"
                     /isolate="VC0902"
                     /isolation_source="environmental"
                     /db_xref="taxon:666"
                     /geo_loc_name="China"
                     /lat_lon="30.75 N 120.75 E"
                     /collection_date="2024"
                     /collected_by="JXCDC"
WGS         JBWCAF010000001-JBWCAF010000128
WGS_SCAFLD  NZ_JBWCAF010000001-NZ_JBWCAF010000128
//
LOCUS       NZ_WIDP01000000      2230011 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Streptococcus agalactiae strain DPC7040, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WIDP00000000
VERSION     NZ_WIDP00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13111080
            Assembly: GCF_011682135.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus agalactiae
  ORGANISM  Streptococcus agalactiae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2230011)
  AUTHORS   Garcia-Gutierrez,E., O'Connor,P.M., Saalbach,G., Walsh,C.J.,
            Hegarty,J.W., Guinane,C.M., Mayer,M.J., Narbad,A. and Cotter,P.D.
  TITLE     First evidence of production of the lantibiotic nisin P
  JOURNAL   Sci Rep 10 (1), 3738 (2020)
   PUBMED   32111904
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2230011)
  AUTHORS   Hegarty,J.W., Guinane,C.M. and Cotter,P.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2019) GMH, Quadram Institute Bioscience, Colney
            Lane, Norwich Research Park, Norwich, Norfolk NR4 7UQ, United
            Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WIDP00000000.1.
            The Streptococcus agalactiae whole genome shotgun (WGS) project has
            the project accession NZ_WIDP00000000.  This version of the project
            (01) has the accession number NZ_WIDP01000000, and consists of
            sequences WIDP01000001-WIDP01000050.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Teagasc Moorepark.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2013
            Assembly Method        :: SPAdes v. 2.5.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 30.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_011682135.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:19:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,317
            CDSs (total)                      :: 2,222
            Genes (coding)                    :: 2,124
            CDSs (with protein)               :: 2,124
            Genes (RNA)                       :: 95
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 73
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 98
            CDSs (without protein)            :: 98
            Pseudo Genes (ambiguous residues) :: 0 of 98
            Pseudo Genes (frameshifted)       :: 33 of 98
            Pseudo Genes (incomplete)         :: 62 of 98
            Pseudo Genes (internal stop)      :: 25 of 98
            Pseudo Genes (multiple problems)  :: 16 of 98
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2230011
                     /organism="Streptococcus agalactiae"
                     /mol_type="genomic DNA"
                     /strain="DPC7040"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:1311"
                     /geo_loc_name="Ireland"
                     /collection_date="2013"
                     /identified_by="Enriqueta Garcia-Gutierrez"
WGS         WIDP01000001-WIDP01000050
WGS_SCAFLD  NZ_WIDP01000001-NZ_WIDP01000050
//
LOCUS       NZ_JACWJO010000000   1926796 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Streptococcus agalactiae strain 582, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JACWJO000000000
VERSION     NZ_JACWJO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN16073431
            Assembly: GCF_014875425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus agalactiae
  ORGANISM  Streptococcus agalactiae
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1926796)
  AUTHORS   Vuillemin,X., Hays,C., Plainvert,C., Dmytruk,N., Louis,M.,
            Touak,G., Saint-Pierre,B., Adoux,L., Letourneur,F., Frigo,A.,
            Poyart,C. and Tazi,A.
  TITLE     Invasive group B Streptococcus infections in non-pregnant adults: a
            retrospective study, France, 2007-2019
  JOURNAL   Clin Microbiol Infect 27 (1), 129 (2021)
   PUBMED   33007472
REFERENCE   2  (bases 1 to 1926796)
  AUTHORS   Plainvert,C., Touak,G., Adoux,L., Saint-Pierre,B., Letourneur,F.,
            Poyart,C. and Tazi,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-SEP-2020) U1016, Inserm, Rue Mechain, Paris 75014,
            France
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JACWJO000000000.1.
            The Streptococcus agalactiae whole genome shotgun (WGS) project has
            the project accession NZ_JACWJO000000000.  This version of the
            project (01) has the accession number NZ_JACWJO010000000, and
            consists of sequences JACWJO010000001-JACWJO010000078.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_014875425.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:18:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,957
            CDSs (total)                      :: 1,898
            Genes (coding)                    :: 1,808
            CDSs (with protein)               :: 1,808
            Genes (RNA)                       :: 59
            rRNAs                             :: 1, 3, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 3, 5 (16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 90
            CDSs (without protein)            :: 90
            Pseudo Genes (ambiguous residues) :: 0 of 90
            Pseudo Genes (frameshifted)       :: 34 of 90
            Pseudo Genes (incomplete)         :: 52 of 90
            Pseudo Genes (internal stop)      :: 16 of 90
            Pseudo Genes (multiple problems)  :: 8 of 90
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1926796
                     /organism="Streptococcus agalactiae"
                     /mol_type="genomic DNA"
                     /strain="582"
                     /isolation_source="blood"
                     /host="Homo sapiens"
                     /db_xref="taxon:1311"
                     /geo_loc_name="France"
                     /lat_lon="46.00 N 2.00 E"
                     /collection_date="2009"
                     /collected_by="CNR-Strep"
WGS         JACWJO010000001-JACWJO010000078
WGS_SCAFLD  NZ_JACWJO010000001-NZ_JACWJO010000078
//
LOCUS       NZ_VZNC01000000      2217842 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Streptococcus suis strain CPD22, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VZNC00000000
VERSION     NZ_VZNC00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12784759
            Assembly: GCF_018417935.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2217842)
  AUTHORS   Dong,X., Chao,Y., Zhou,Y., Zhou,R., Zhang,W., Fischetti,V.A.,
            Wang,X., Feng,Y. and Li,J.
  TITLE     The global emergence of a novel Streptococcus suis clade associated
            with human infections
  JOURNAL   EMBO Mol Med 13 (7), e13810 (2021)
   PUBMED   34137500
REFERENCE   2  (bases 1 to 2217842)
  AUTHORS   Li,J. and Dong,X.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-SEP-2019) College of Food Sciences & Technology,
            Huazhong Agricultural University, No. 1, Shizishan Street, Wuhan,
            Hubei 430070, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VZNC00000000.1.
            The Streptococcus suis whole genome shotgun (WGS) project has the
            project accession NZ_VZNC00000000.  This version of the project
            (01) has the accession number NZ_VZNC01000000, and consists of
            sequences VZNC01000001-VZNC01000084.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 500x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_018417935.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:15:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,291
            CDSs (total)                      :: 2,236
            Genes (coding)                    :: 2,149
            CDSs (with protein)               :: 2,149
            Genes (RNA)                       :: 55
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 87
            CDSs (without protein)            :: 87
            Pseudo Genes (ambiguous residues) :: 0 of 87
            Pseudo Genes (frameshifted)       :: 32 of 87
            Pseudo Genes (incomplete)         :: 56 of 87
            Pseudo Genes (internal stop)      :: 15 of 87
            Pseudo Genes (multiple problems)  :: 12 of 87
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2217842
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /strain="CPD22"
                     /host="pig"
                     /db_xref="taxon:1307"
                     /geo_loc_name="China"
                     /collection_date="2010"
WGS         VZNC01000001-VZNC01000084
WGS_SCAFLD  NZ_VZNC01000001-NZ_VZNC01000084
//
LOCUS       NZ_JAYDCA010000000   4062147 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae strain 18-VB00592, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAYDCA000000000
VERSION     NZ_JAYDCA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37977902
            Assembly: GCF_037462555.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4062147)
  AUTHORS   Fleischmann,S.
  TITLE     NOVC from German coastal regions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4062147)
  AUTHORS   Fleischmann,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) School of Veterinary Medicine; Institute of
            Food Safety and Food Hygiene, Freie Universitaet Berlin, Koenigsweg
            69, Berlin 14163, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAYDCA000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JAYDCA000000000.  This version of the project
            (01) has the accession number NZ_JAYDCA010000000, and consists of
            sequences JAYDCA010000001-JAYDCA010000411.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 18x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037462555.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:36:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,921
            CDSs (total)                      :: 3,795
            Genes (coding)                    :: 3,575
            CDSs (with protein)               :: 3,575
            Genes (RNA)                       :: 126
            rRNAs                             :: 7, 12, 10 (5S, 16S, 23S)
            complete rRNAs                    :: 6 (5S)
            partial rRNAs                     :: 1, 12, 10 (5S, 16S, 23S)
            tRNAs                             :: 93
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 220
            CDSs (without protein)            :: 220
            Pseudo Genes (ambiguous residues) :: 0 of 220
            Pseudo Genes (frameshifted)       :: 33 of 220
            Pseudo Genes (incomplete)         :: 188 of 220
            Pseudo Genes (internal stop)      :: 22 of 220
            Pseudo Genes (multiple problems)  :: 23 of 220
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4062147
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /strain="18-VB00592"
                     /serotype="non-O1/non-O139"
                     /isolation_source="water"
                     /db_xref="taxon:666"
                     /geo_loc_name="Germany: Baltic Sea"
                     /collection_date="2018-07-23"
WGS         JAYDCA010000001-JAYDCA010000411
WGS_SCAFLD  NZ_JAYDCA010000001-NZ_JAYDCA010000411
//
LOCUS       NZ_WPCW01000000      2023794 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Streptococcus catagoni strain 99-1/2017, whole genome shotgun
            sequencing project.
ACCESSION   NZ_WPCW00000000
VERSION     NZ_WPCW00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN13483526
            Assembly: GCF_011421425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus catagoni
  ORGANISM  Streptococcus catagoni
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2023794)
  AUTHORS   Eisenberg,T., Heydel,C., Prenger-Berninghoff,E., Mohammed,A.,
            Kling,U., Hamann,H.-P., Semmler,T., Muehldorfer,K., Kaempfer,P.,
            Blom,J. and Ewers,C.
  TITLE     Molecular characterization of new Streptobacillus species
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2023794)
  AUTHORS   Eisenberg,T., Heydel,C., Prenger-Berninghoff,E., Mohammed,A.,
            Kling,U., Hamann,H.-P., Semmler,T., Muehldorfer,K., Kaempfer,P.,
            Blom,J. and Ewers,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2019) NG 1 - Microbial Genomics, Robert Koch
            Institute, Nordufer 20, Berlin 13353, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WPCW00000000.1.
            The Streptococcus catagoni whole genome shotgun (WGS) project has
            the project accession NZ_WPCW00000000.  This version of the project
            (01) has the accession number NZ_WPCW01000000, and consists of
            sequences WPCW01000001-WPCW01000009.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 2019
            Assembly Method        :: SPAdes v. 3.9
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 90.0x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_011421425.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:05:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,012
            CDSs (total)                      :: 1,958
            Genes (coding)                    :: 1,867
            CDSs (with protein)               :: 1,867
            Genes (RNA)                       :: 54
            rRNAs                             :: 3, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 91
            CDSs (without protein)            :: 91
            Pseudo Genes (ambiguous residues) :: 0 of 91
            Pseudo Genes (frameshifted)       :: 44 of 91
            Pseudo Genes (incomplete)         :: 53 of 91
            Pseudo Genes (internal stop)      :: 20 of 91
            Pseudo Genes (multiple problems)  :: 24 of 91
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2023794
                     /organism="Streptococcus catagoni"
                     /mol_type="genomic DNA"
                     /strain="99-1/2017"
                     /isolation_source="lung"
                     /host="Catagonus wagneri"
                     /type_material="type strain of Streptococcus catagoni"
                     /db_xref="taxon:2654874"
                     /geo_loc_name="Germany"
                     /collection_date="2017"
WGS         WPCW01000001-WPCW01000009
WGS_SCAFLD  NZ_WPCW01000001-NZ_WPCW01000009
//
LOCUS       NZ_JAYDBY010000000   4010037 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae strain 18-VB00596, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAYDBY000000000
VERSION     NZ_JAYDBY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37977904
            Assembly: GCF_037462495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4010037)
  AUTHORS   Fleischmann,S.
  TITLE     NOVC from German coastal regions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4010037)
  AUTHORS   Fleischmann,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) School of Veterinary Medicine; Institute of
            Food Safety and Food Hygiene, Freie Universitaet Berlin, Koenigsweg
            69, Berlin 14163, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAYDBY000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JAYDBY000000000.  This version of the project
            (01) has the accession number NZ_JAYDBY010000000, and consists of
            sequences JAYDBY010000001-JAYDBY010000184.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 5x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037462495.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:28:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,794
            CDSs (total)                      :: 3,670
            Genes (coding)                    :: 3,590
            CDSs (with protein)               :: 3,590
            Genes (RNA)                       :: 124
            rRNAs                             :: 10, 12, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 1 (5S, 16S)
            partial rRNAs                     :: 2, 11, 7 (5S, 16S, 23S)
            tRNAs                             :: 91
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 80
            CDSs (without protein)            :: 80
            Pseudo Genes (ambiguous residues) :: 0 of 80
            Pseudo Genes (frameshifted)       :: 22 of 80
            Pseudo Genes (incomplete)         :: 52 of 80
            Pseudo Genes (internal stop)      :: 15 of 80
            Pseudo Genes (multiple problems)  :: 9 of 80
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4010037
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /strain="18-VB00596"
                     /serotype="non-O1/non-O139"
                     /isolation_source="water"
                     /db_xref="taxon:666"
                     /geo_loc_name="Germany: Baltic Sea"
                     /collection_date="2018-07-23"
WGS         JAYDBY010000001-JAYDBY010000184
WGS_SCAFLD  NZ_JAYDBY010000001-NZ_JAYDBY010000184
//
LOCUS       NZ_JBCPTB010000000   2750302 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain EB2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPTB000000000
VERSION     NZ_JBCPTB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065886
            Assembly: GCF_045909615.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2750302)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2750302)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPTB000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPTB000000000.  This version of the
            project (01) has the accession number NZ_JBCPTB010000000, and
            consists of sequences JBCPTB010000001-JBCPTB010000075.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045909615.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:46:52
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,752
            CDSs (total)                      :: 2,690
            Genes (coding)                    :: 2,627
            CDSs (with protein)               :: 2,627
            Genes (RNA)                       :: 62
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 63
            CDSs (without protein)            :: 63
            Pseudo Genes (ambiguous residues) :: 0 of 63
            Pseudo Genes (frameshifted)       :: 39 of 63
            Pseudo Genes (incomplete)         :: 26 of 63
            Pseudo Genes (internal stop)      :: 13 of 63
            Pseudo Genes (multiple problems)  :: 14 of 63
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2750302
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="EB2"
                     /isolation_source="Mastitis milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Inner Mongolia autonomous region"
                     /collection_date="2020-08"
                     /collected_by="Zekun Li"
WGS         JBCPTB010000001-JBCPTB010000075
WGS_SCAFLD  NZ_JBCPTB010000001-NZ_JBCPTB010000075
//
LOCUS       NZ_JBJMAD010000000   4999821 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Stenotrophomonas maltophilia strain UPSm3, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJMAD000000000
VERSION     NZ_JBJMAD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44521701
            Assembly: GCF_045800555.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
REFERENCE   1  (bases 1 to 4999821)
  AUTHORS   Cobe,B.L., Ozer,E.A., Nozick,S.H., Hauser,A.R. and Cianciotto,N.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-OCT-2024) Microbiology-Immunology, Northwestern
            University, 303 E Chicago Ave, Chicago, IL 60611, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJMAD000000000.1.
            The Stenotrophomonas maltophilia whole genome shotgun (WGS) project
            has the project accession NZ_JBJMAD000000000.  This version of the
            project (01) has the accession number NZ_JBJMAD010000000, and
            consists of sequences JBJMAD010000001-JBJMAD010000040.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.9.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 69x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800555.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:40:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,670
            CDSs (total)                      :: 4,588
            Genes (coding)                    :: 4,562
            CDSs (with protein)               :: 4,562
            Genes (RNA)                       :: 82
            rRNAs                             :: 5, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 70
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 8 of 26
            Pseudo Genes (incomplete)         :: 14 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            Pseudo Genes (multiple problems)  :: 2 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4999821
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /strain="UPSm3"
                     /isolation_source="respiratory sinuses"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /geo_loc_name="USA: Philadelphia"
                     /lat_lon="39.952305 N 75.193703 W"
                     /collection_date="2010"
                     /collected_by="Paul Edelstein"
WGS         JBJMAD010000001-JBJMAD010000040
WGS_SCAFLD  NZ_JBJMAD010000001-NZ_JBJMAD010000040
//
LOCUS       NZ_JBAFTZ010000000   4092276 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae strain 18-VB00287, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBAFTZ000000000
VERSION     NZ_JBAFTZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37977890
            Assembly: GCF_037462795.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4092276)
  AUTHORS   Fleischmann,S.
  TITLE     NOVC from German coastal regions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4092276)
  AUTHORS   Fleischmann,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JAN-2024) School of Veterinary Medicine; Institute of
            Food Safety and Food Hygiene, Freie Universitaet Berlin, Koenigsweg
            69, Berlin 14163, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAFTZ000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JBAFTZ000000000.  This version of the project
            (01) has the accession number NZ_JBAFTZ010000000, and consists of
            sequences JBAFTZ010000001-JBAFTZ010000140.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 13x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037462795.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:35:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,818
            CDSs (total)                      :: 3,699
            Genes (coding)                    :: 3,602
            CDSs (with protein)               :: 3,602
            Genes (RNA)                       :: 119
            rRNAs                             :: 13, 9, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 1 (5S, 23S)
            partial rRNAs                     :: 4, 9, 2 (5S, 16S, 23S)
            tRNAs                             :: 90
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 97
            CDSs (without protein)            :: 97
            Pseudo Genes (ambiguous residues) :: 0 of 97
            Pseudo Genes (frameshifted)       :: 34 of 97
            Pseudo Genes (incomplete)         :: 54 of 97
            Pseudo Genes (internal stop)      :: 26 of 97
            Pseudo Genes (multiple problems)  :: 12 of 97
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4092276
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /strain="18-VB00287"
                     /serotype="non-O1/non-O139"
                     /isolation_source="water"
                     /db_xref="taxon:666"
                     /geo_loc_name="Germany: North Sea"
                     /collection_date="2017-09-11"
WGS         JBAFTZ010000001-JBAFTZ010000140
WGS_SCAFLD  NZ_JBAFTZ010000001-NZ_JBAFTZ010000140
//
LOCUS       NZ_JBCPUC010000000   2747319 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain 75, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPUC000000000
VERSION     NZ_JBCPUC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065859
            Assembly: GCF_045910135.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2747319)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2747319)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPUC000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPUC000000000.  This version of the
            project (01) has the accession number NZ_JBCPUC010000000, and
            consists of sequences JBCPUC010000001-JBCPUC010000090.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045910135.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:53:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,765
            CDSs (total)                      :: 2,703
            Genes (coding)                    :: 2,586
            CDSs (with protein)               :: 2,586
            Genes (RNA)                       :: 62
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 117
            CDSs (without protein)            :: 117
            Pseudo Genes (ambiguous residues) :: 0 of 117
            Pseudo Genes (frameshifted)       :: 48 of 117
            Pseudo Genes (incomplete)         :: 58 of 117
            Pseudo Genes (internal stop)      :: 27 of 117
            Pseudo Genes (multiple problems)  :: 15 of 117
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2747319
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="75"
                     /isolation_source="Raw milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Henan"
                     /collection_date="2020-06"
                     /collected_by="Zekun Li"
WGS         JBCPUC010000001-JBCPUC010000090
WGS_SCAFLD  NZ_JBCPUC010000001-NZ_JBCPUC010000090
//
LOCUS       NZ_WABV01000000      1970362 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Streptococcus suis strain P1/7, whole genome shotgun sequencing
            project.
ACCESSION   NZ_WABV00000000
VERSION     NZ_WABV00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12783745
            Assembly: GCF_017655595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus suis
  ORGANISM  Streptococcus suis
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 1970362)
  AUTHORS   Okura,M., Auger,J.P., Shibahara,T., Goyette-Desjardins,G., Van
            Calsteren,M.R., Maruyama,F., Kawai,M., Osaki,M., Segura,M.,
            Gottschalk,M. and Takamatsu,D.
  TITLE     Capsular polysaccharide switching in Streptococcus suis modulates
            host cell interactions and virulence
  JOURNAL   Sci Rep 11 (1), 6513 (2021)
   PUBMED   33753801
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1970362)
  AUTHORS   Okura,M. and Maruyama,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-SEP-2019) Division of Bacterial and Parasitic
            Diseases, National Institute of Animal Health, 3-1-5 Kannondai,
            Tsukuba, Ibaraki 305-0856, Japan
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            WABV00000000.1.
            The Streptococcus suis whole genome shotgun (WGS) project has the
            project accession NZ_WABV00000000.  This version of the project
            (01) has the accession number NZ_WABV01000000, and consists of
            sequences WABV01000001-WABV01000029.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method           :: SPAdes v. 3.12.0; Unicycler v. 0.4.6
            Genome Representation     :: Full
            Expected Final Version    :: Yes
            Reference-guided Assembly :: GCA_000091905.1
            Genome Coverage           :: 679x
            Sequencing Technology     :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_017655595.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:19:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,916
            CDSs (total)                      :: 1,878
            Genes (coding)                    :: 1,828
            CDSs (with protein)               :: 1,828
            Genes (RNA)                       :: 38
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 31
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 50
            CDSs (without protein)            :: 50
            Pseudo Genes (ambiguous residues) :: 0 of 50
            Pseudo Genes (frameshifted)       :: 26 of 50
            Pseudo Genes (incomplete)         :: 24 of 50
            Pseudo Genes (internal stop)      :: 12 of 50
            Pseudo Genes (multiple problems)  :: 10 of 50
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1970362
                     /organism="Streptococcus suis"
                     /mol_type="genomic DNA"
                     /strain="P1/7"
                     /serotype="2"
                     /host="Sus scrofa"
                     /db_xref="taxon:1307"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2017"
WGS         WABV01000001-WABV01000029
WGS_SCAFLD  NZ_WABV01000001-NZ_WABV01000029
//
LOCUS       NZ_JBJNWE010000000   2855328 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain SVF1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJNWE000000000
VERSION     NZ_JBJNWE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN45157884
            Assembly: GCF_045897415.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2855328)
  AUTHORS   Letuka,L. and George,K.
  TITLE     Exploring the thread of Staphylococcus aureus in ready to eat foods
            from Mangaung Metropolitan Municipality, South Africa
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2855328)
  AUTHORS   Letuka,L. and George,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-DEC-2024) Life Sciences, Central University of
            Technology, 1 Park road, Bloemfontein, Free state 9300, South
            Africa
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJNWE000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBJNWE000000000.  This version of the
            project (01) has the accession number NZ_JBJNWE010000000, and
            consists of sequences JBJNWE010000001-JBJNWE010000005.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: HGAP v. 2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 140.0x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045897415.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:59:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,840
            CDSs (total)                      :: 2,757
            Genes (coding)                    :: 2,662
            CDSs (with protein)               :: 2,662
            Genes (RNA)                       :: 83
            rRNAs                             :: 7, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 60
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 95
            CDSs (without protein)            :: 95
            Pseudo Genes (ambiguous residues) :: 0 of 95
            Pseudo Genes (frameshifted)       :: 46 of 95
            Pseudo Genes (incomplete)         :: 40 of 95
            Pseudo Genes (internal stop)      :: 23 of 95
            Pseudo Genes (multiple problems)  :: 12 of 95
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2855328
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="SVF1"
                     /isolation_source="food"
                     /db_xref="taxon:1280"
                     /geo_loc_name="South Africa: Bloemfontein"
                     /lat_lon="29.1303 S 26.2358 E"
                     /collection_date="2022"
                     /collected_by="Letlotlo Letuka"
WGS         JBJNWE010000001-JBJNWE010000005
WGS_SCAFLD  NZ_JBJNWE010000001-NZ_JBJNWE010000005
//
LOCUS       NZ_JAYDCC010000000   4090892 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae strain 18-VB00587, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAYDCC000000000
VERSION     NZ_JAYDCC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37977899
            Assembly: GCF_037462605.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4090892)
  AUTHORS   Fleischmann,S.
  TITLE     NOVC from German coastal regions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4090892)
  AUTHORS   Fleischmann,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) School of Veterinary Medicine; Institute of
            Food Safety and Food Hygiene, Freie Universitaet Berlin, Koenigsweg
            69, Berlin 14163, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAYDCC000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JAYDCC000000000.  This version of the project
            (01) has the accession number NZ_JAYDCC010000000, and consists of
            sequences JAYDCC010000001-JAYDCC010000171.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 5x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037462605.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:33:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,863
            CDSs (total)                      :: 3,745
            Genes (coding)                    :: 3,653
            CDSs (with protein)               :: 3,653
            Genes (RNA)                       :: 118
            rRNAs                             :: 11, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 10 (5S)
            partial rRNAs                     :: 1, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 91
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 22 of 92
            Pseudo Genes (incomplete)         :: 64 of 92
            Pseudo Genes (internal stop)      :: 15 of 92
            Pseudo Genes (multiple problems)  :: 9 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4090892
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /strain="18-VB00587"
                     /serotype="non-O1/non-O139"
                     /isolation_source="water"
                     /db_xref="taxon:666"
                     /geo_loc_name="Germany: Baltic Sea"
                     /collection_date="2018-07-23"
WGS         JAYDCC010000001-JAYDCC010000171
WGS_SCAFLD  NZ_JAYDCC010000001-NZ_JAYDCC010000171
//
LOCUS       NZ_JBCPSW010000000   2698387 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain EC2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPSW000000000
VERSION     NZ_JBCPSW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065891
            Assembly: GCF_045909495.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2698387)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2698387)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPSW000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPSW000000000.  This version of the
            project (01) has the accession number NZ_JBCPSW010000000, and
            consists of sequences JBCPSW010000001-JBCPSW010000124.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045909495.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:55:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,641
            CDSs (total)                      :: 2,583
            Genes (coding)                    :: 2,473
            CDSs (with protein)               :: 2,473
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 2, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 1, 1, 3 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 110
            CDSs (without protein)            :: 110
            Pseudo Genes (ambiguous residues) :: 0 of 110
            Pseudo Genes (frameshifted)       :: 57 of 110
            Pseudo Genes (incomplete)         :: 44 of 110
            Pseudo Genes (internal stop)      :: 20 of 110
            Pseudo Genes (multiple problems)  :: 9 of 110
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2698387
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="EC2"
                     /isolation_source="Nose swabs from mastitis dairy cows"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Inner Mongolia autonomous region"
                     /collection_date="2020-08"
                     /collected_by="Zekun Li"
WGS         JBCPSW010000001-JBCPSW010000124
WGS_SCAFLD  NZ_JBCPSW010000001-NZ_JBCPSW010000124
//
LOCUS       NZ_JBAFTY010000000   4003607 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae strain 18-VB00347, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBAFTY000000000
VERSION     NZ_JBAFTY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37977891
            Assembly: GCF_037462755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4003607)
  AUTHORS   Fleischmann,S.
  TITLE     NOVC from German coastal regions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4003607)
  AUTHORS   Fleischmann,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JAN-2024) School of Veterinary Medicine; Institute of
            Food Safety and Food Hygiene, Freie Universitaet Berlin, Koenigsweg
            69, Berlin 14163, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAFTY000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JBAFTY000000000.  This version of the project
            (01) has the accession number NZ_JBAFTY010000000, and consists of
            sequences JBAFTY010000001-JBAFTY010000129.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 9x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037462755.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:38:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,677
            CDSs (total)                      :: 3,564
            Genes (coding)                    :: 3,462
            CDSs (with protein)               :: 3,462
            Genes (RNA)                       :: 113
            rRNAs                             :: 9, 13, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 1 (5S, 23S)
            partial rRNAs                     :: 1, 13 (5S, 16S)
            tRNAs                             :: 86
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 102
            CDSs (without protein)            :: 102
            Pseudo Genes (ambiguous residues) :: 0 of 102
            Pseudo Genes (frameshifted)       :: 47 of 102
            Pseudo Genes (incomplete)         :: 47 of 102
            Pseudo Genes (internal stop)      :: 21 of 102
            Pseudo Genes (multiple problems)  :: 9 of 102
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4003607
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /strain="18-VB00347"
                     /serotype="non-O1/non-O139"
                     /isolation_source="water"
                     /db_xref="taxon:666"
                     /geo_loc_name="Germany: North Sea"
                     /collection_date="2017-10-17"
WGS         JBAFTY010000001-JBAFTY010000129
WGS_SCAFLD  NZ_JBAFTY010000001-NZ_JBAFTY010000129
//
LOCUS       NZ_JBCPTJ010000000   2740205 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain CA4, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPTJ000000000
VERSION     NZ_JBCPTJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065878
            Assembly: GCF_045909755.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2740205)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2740205)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPTJ000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPTJ000000000.  This version of the
            project (01) has the accession number NZ_JBCPTJ010000000, and
            consists of sequences JBCPTJ010000001-JBCPTJ010000082.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045909755.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 14:13:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,721
            CDSs (total)                      :: 2,659
            Genes (coding)                    :: 2,581
            CDSs (with protein)               :: 2,581
            Genes (RNA)                       :: 62
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2 (5S, 16S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 78
            CDSs (without protein)            :: 78
            Pseudo Genes (ambiguous residues) :: 0 of 78
            Pseudo Genes (frameshifted)       :: 47 of 78
            Pseudo Genes (incomplete)         :: 32 of 78
            Pseudo Genes (internal stop)      :: 15 of 78
            Pseudo Genes (multiple problems)  :: 15 of 78
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2740205
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="CA4"
                     /isolation_source="Raw milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Inner Mongolia autonomous region"
                     /collection_date="2020-08"
                     /collected_by="Zekun Li"
WGS         JBCPTJ010000001-JBCPTJ010000082
WGS_SCAFLD  NZ_JBCPTJ010000001-NZ_JBCPTJ010000082
//
LOCUS       NZ_JBJMAC010000000   4740187 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Stenotrophomonas maltophilia strain UPSm5, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBJMAC000000000
VERSION     NZ_JBJMAC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN44521702
            Assembly: GCF_045800455.1
KEYWORDS    WGS; RefSeq.
SOURCE      Stenotrophomonas maltophilia
  ORGANISM  Stenotrophomonas maltophilia
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Lysobacterales; Lysobacteraceae; Stenotrophomonas; Stenotrophomonas
            maltophilia group.
REFERENCE   1  (bases 1 to 4740187)
  AUTHORS   Cobe,B.L., Ozer,E.A., Nozick,S.H., Hauser,A.R. and Cianciotto,N.P.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-OCT-2024) Microbiology-Immunology, Northwestern
            University, 303 E Chicago Ave, Chicago, IL 60611, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJMAC000000000.1.
            The Stenotrophomonas maltophilia whole genome shotgun (WGS) project
            has the project accession NZ_JBJMAC000000000.  This version of the
            project (01) has the accession number NZ_JBJMAC010000000, and
            consists of sequences JBJMAC010000001-JBJMAC010000033.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. v3.9.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 127x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045800455.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:39:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,423
            CDSs (total)                      :: 4,340
            Genes (coding)                    :: 4,312
            CDSs (with protein)               :: 4,312
            Genes (RNA)                       :: 83
            rRNAs                             :: 5, 4, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1 (5S, 23S)
            partial rRNAs                     :: 1, 4, 1 (5S, 16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 7 of 28
            Pseudo Genes (incomplete)         :: 20 of 28
            Pseudo Genes (internal stop)      :: 1 of 28
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4740187
                     /organism="Stenotrophomonas maltophilia"
                     /mol_type="genomic DNA"
                     /strain="UPSm5"
                     /isolation_source="respiratory sinuses"
                     /host="Homo sapiens"
                     /db_xref="taxon:40324"
                     /geo_loc_name="USA: Philadelphia"
                     /lat_lon="39.952305 N 75.193703 W"
                     /collection_date="2010"
                     /collected_by="Paul Edelstein"
WGS         JBJMAC010000001-JBJMAC010000033
WGS_SCAFLD  NZ_JBJMAC010000001-NZ_JBJMAC010000033
//
LOCUS       NZ_JBCPTY010000000   2795870 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain 8, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPTY000000000
VERSION     NZ_JBCPTY000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065863
            Assembly: GCF_045910055.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2795870)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2795870)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPTY000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPTY000000000.  This version of the
            project (01) has the accession number NZ_JBCPTY010000000, and
            consists of sequences JBCPTY010000001-JBCPTY010000093.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045910055.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:53:20
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,823
            CDSs (total)                      :: 2,761
            Genes (coding)                    :: 2,636
            CDSs (with protein)               :: 2,636
            Genes (RNA)                       :: 62
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 125
            CDSs (without protein)            :: 125
            Pseudo Genes (ambiguous residues) :: 0 of 125
            Pseudo Genes (frameshifted)       :: 53 of 125
            Pseudo Genes (incomplete)         :: 56 of 125
            Pseudo Genes (internal stop)      :: 31 of 125
            Pseudo Genes (multiple problems)  :: 14 of 125
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2795870
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="8"
                     /isolation_source="Raw milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Henan"
                     /collection_date="2020-06"
                     /collected_by="Zekun Li"
WGS         JBCPTY010000001-JBCPTY010000093
WGS_SCAFLD  NZ_JBCPTY010000001-NZ_JBCPTY010000093
//
LOCUS       NZ_JBAFUB010000000   4078565 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae strain 18-VB00271, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBAFUB000000000
VERSION     NZ_JBAFUB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37977886
            Assembly: GCF_037462875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4078565)
  AUTHORS   Fleischmann,S.
  TITLE     NOVC from German coastal regions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4078565)
  AUTHORS   Fleischmann,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JAN-2024) School of Veterinary Medicine; Institute of
            Food Safety and Food Hygiene, Freie Universitaet Berlin, Koenigsweg
            69, Berlin 14163, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAFUB000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JBAFUB000000000.  This version of the project
            (01) has the accession number NZ_JBAFUB010000000, and consists of
            sequences JBAFUB010000001-JBAFUB010000135.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037462875.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:35:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,802
            CDSs (total)                      :: 3,668
            Genes (coding)                    :: 3,585
            CDSs (with protein)               :: 3,585
            Genes (RNA)                       :: 134
            rRNAs                             :: 7, 19, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1 (5S, 23S)
            partial rRNAs                     :: 19, 5 (16S, 23S)
            tRNAs                             :: 98
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 83
            CDSs (without protein)            :: 83
            Pseudo Genes (ambiguous residues) :: 0 of 83
            Pseudo Genes (frameshifted)       :: 27 of 83
            Pseudo Genes (incomplete)         :: 56 of 83
            Pseudo Genes (internal stop)      :: 12 of 83
            Pseudo Genes (multiple problems)  :: 9 of 83
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4078565
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /strain="18-VB00271"
                     /serotype="non-O1/non-O139"
                     /isolation_source="sediment"
                     /db_xref="taxon:666"
                     /geo_loc_name="Germany: Baltic Sea"
                     /collection_date="2017-09-18"
WGS         JBAFUB010000001-JBAFUB010000135
WGS_SCAFLD  NZ_JBAFUB010000001-NZ_JBAFUB010000135
//
LOCUS       NZ_JAACYC010000000   2077643 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Streptococcus equi strain 18-026, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAACYC000000000
VERSION     NZ_JAACYC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12898376
            Assembly: GCF_009938945.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptococcus equi
  ORGANISM  Streptococcus equi
            Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales;
            Streptococcaceae; Streptococcus.
REFERENCE   1  (bases 1 to 2077643)
  AUTHORS   Morris,E.R.A.
  TITLE     Molecular epidemiological study of a strangles outbreak in Texas
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2077643)
  AUTHORS   Morris,E.R.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2020) Large Animal Clinical Sciences, Texas A&M
            University, 4475 TAMU, College Station, TX 77843, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAACYC000000000.1.
            The Streptococcus equi whole genome shotgun (WGS) project has the
            project accession NZ_JAACYC000000000.  This version of the project
            (01) has the accession number NZ_JAACYC010000000, and consists of
            sequences JAACYC010000001-JAACYC010000167.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.11.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 37x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_009938945.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 10:40:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,036
            CDSs (total)                      :: 1,996
            Genes (coding)                    :: 1,875
            CDSs (with protein)               :: 1,875
            Genes (RNA)                       :: 40
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 33
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 121
            CDSs (without protein)            :: 121
            Pseudo Genes (ambiguous residues) :: 0 of 121
            Pseudo Genes (frameshifted)       :: 30 of 121
            Pseudo Genes (incomplete)         :: 75 of 121
            Pseudo Genes (internal stop)      :: 25 of 121
            Pseudo Genes (multiple problems)  :: 8 of 121
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2077643
                     /organism="Streptococcus equi"
                     /mol_type="genomic DNA"
                     /strain="18-026"
                     /host="Equus caballus"
                     /db_xref="taxon:1336"
                     /geo_loc_name="USA: Texas"
                     /collection_date="2018"
WGS         JAACYC010000001-JAACYC010000167
WGS_SCAFLD  NZ_JAACYC010000001-NZ_JAACYC010000167
//
LOCUS       NZ_JBCPSZ010000000   2746462 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain EB4, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPSZ000000000
VERSION     NZ_JBCPSZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065888
            Assembly: GCF_045909535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2746462)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2746462)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPSZ000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPSZ000000000.  This version of the
            project (01) has the accession number NZ_JBCPSZ010000000, and
            consists of sequences JBCPSZ010000001-JBCPSZ010000122.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045909535.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:55:54
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,715
            CDSs (total)                      :: 2,659
            Genes (coding)                    :: 2,545
            CDSs (with protein)               :: 2,545
            Genes (RNA)                       :: 56
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 114
            CDSs (without protein)            :: 114
            Pseudo Genes (ambiguous residues) :: 1 of 114
            Pseudo Genes (frameshifted)       :: 57 of 114
            Pseudo Genes (incomplete)         :: 48 of 114
            Pseudo Genes (internal stop)      :: 21 of 114
            Pseudo Genes (multiple problems)  :: 10 of 114
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2746462
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="EB4"
                     /isolation_source="Mastitis milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Inner Mongolia autonomous region"
                     /collection_date="2020-08"
                     /collected_by="Zekun Li"
WGS         JBCPSZ010000001-JBCPSZ010000122
WGS_SCAFLD  NZ_JBCPSZ010000001-NZ_JBCPSZ010000122
//
LOCUS       NZ_JBCPWJ010000000   2792236 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain 101, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPWJ000000000
VERSION     NZ_JBCPWJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065799
            Assembly: GCF_045911315.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2792236)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2792236)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPWJ000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPWJ000000000.  This version of the
            project (01) has the accession number NZ_JBCPWJ010000000, and
            consists of sequences JBCPWJ010000001-JBCPWJ010000098.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045911315.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:55:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,800
            CDSs (total)                      :: 2,739
            Genes (coding)                    :: 2,616
            CDSs (with protein)               :: 2,616
            Genes (RNA)                       :: 61
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 52 of 123
            Pseudo Genes (incomplete)         :: 52 of 123
            Pseudo Genes (internal stop)      :: 31 of 123
            Pseudo Genes (multiple problems)  :: 12 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2792236
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="101"
                     /isolation_source="Raw milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Henan"
                     /collection_date="2020-06"
                     /collected_by="Zekun Li"
WGS         JBCPWJ010000001-JBCPWJ010000098
WGS_SCAFLD  NZ_JBCPWJ010000001-NZ_JBCPWJ010000098
//
LOCUS       NZ_JAYDBW010000000   4331692 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae strain 18-VB00600, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAYDBW000000000
VERSION     NZ_JAYDBW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37977906
            Assembly: GCF_037462405.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4331692)
  AUTHORS   Fleischmann,S.
  TITLE     NOVC from German coastal regions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4331692)
  AUTHORS   Fleischmann,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) School of Veterinary Medicine; Institute of
            Food Safety and Food Hygiene, Freie Universitaet Berlin, Koenigsweg
            69, Berlin 14163, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAYDBW000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JAYDBW000000000.  This version of the project
            (01) has the accession number NZ_JAYDBW010000000, and consists of
            sequences JAYDBW010000001-JAYDBW010000295.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 7x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037462405.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:29:27
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,223
            CDSs (total)                      :: 4,107
            Genes (coding)                    :: 3,918
            CDSs (with protein)               :: 3,918
            Genes (RNA)                       :: 116
            rRNAs                             :: 9, 7, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 6, 3 (5S, 16S, 23S)
            tRNAs                             :: 92
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 189
            CDSs (without protein)            :: 189
            Pseudo Genes (ambiguous residues) :: 0 of 189
            Pseudo Genes (frameshifted)       :: 37 of 189
            Pseudo Genes (incomplete)         :: 148 of 189
            Pseudo Genes (internal stop)      :: 29 of 189
            Pseudo Genes (multiple problems)  :: 25 of 189
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4331692
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /strain="18-VB00600"
                     /serotype="non-O1/non-O139"
                     /isolation_source="sediment"
                     /db_xref="taxon:666"
                     /geo_loc_name="Germany: Baltic Sea"
                     /collection_date="2018-07-23"
WGS         JAYDBW010000001-JAYDBW010000295
WGS_SCAFLD  NZ_JAYDBW010000001-NZ_JAYDBW010000295
//
LOCUS       NZ_JAYDCD010000000   4214760 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae strain 18-VB00569, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAYDCD000000000
VERSION     NZ_JAYDCD000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37977898
            Assembly: GCF_037462665.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4214760)
  AUTHORS   Fleischmann,S.
  TITLE     NOVC from German coastal regions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4214760)
  AUTHORS   Fleischmann,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) School of Veterinary Medicine; Institute of
            Food Safety and Food Hygiene, Freie Universitaet Berlin, Koenigsweg
            69, Berlin 14163, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAYDCD000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JAYDCD000000000.  This version of the project
            (01) has the accession number NZ_JAYDCD010000000, and consists of
            sequences JAYDCD010000001-JAYDCD010000543.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 18x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037462665.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:36:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,118
            CDSs (total)                      :: 3,981
            Genes (coding)                    :: 3,714
            CDSs (with protein)               :: 3,714
            Genes (RNA)                       :: 137
            rRNAs                             :: 11, 17, 11 (5S, 16S, 23S)
            complete rRNAs                    :: 7 (5S)
            partial rRNAs                     :: 4, 17, 11 (5S, 16S, 23S)
            tRNAs                             :: 94
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 267
            CDSs (without protein)            :: 267
            Pseudo Genes (ambiguous residues) :: 0 of 267
            Pseudo Genes (frameshifted)       :: 17 of 267
            Pseudo Genes (incomplete)         :: 247 of 267
            Pseudo Genes (internal stop)      :: 15 of 267
            Pseudo Genes (multiple problems)  :: 9 of 267
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4214760
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /strain="18-VB00569"
                     /serotype="non-O1/non-O139"
                     /isolation_source="water"
                     /db_xref="taxon:666"
                     /geo_loc_name="Germany: Baltic Sea"
                     /collection_date="2018-06-25"
WGS         JAYDCD010000001-JAYDCD010000543
WGS_SCAFLD  NZ_JAYDCD010000001-NZ_JAYDCD010000543
//
LOCUS       NZ_JBWBTR010000000   7762022 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Streptomyces sp. iso_22, whole genome shotgun sequencing project.
ACCESSION   NZ_JBWBTR000000000
VERSION     NZ_JBWBTR000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449798
            Assembly: GCF_056172915.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces sp. iso_22
  ORGANISM  Streptomyces sp. iso_22
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 7762022)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7762022)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBTR000000000.1.
            The Streptomyces sp. iso_22 whole genome shotgun (WGS) project has
            the project accession NZ_JBWBTR000000000.  This version of the
            project (01) has the accession number NZ_JBWBTR010000000, and
            consists of sequences JBWBTR010000001-JBWBTR010000003.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 34.4x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172915.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 18:22:32
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,794
            CDSs (total)                      :: 6,707
            Genes (coding)                    :: 6,547
            CDSs (with protein)               :: 6,547
            Genes (RNA)                       :: 87
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 160
            CDSs (without protein)            :: 160
            Pseudo Genes (ambiguous residues) :: 0 of 160
            Pseudo Genes (frameshifted)       :: 64 of 160
            Pseudo Genes (incomplete)         :: 119 of 160
            Pseudo Genes (internal stop)      :: 15 of 160
            Pseudo Genes (multiple problems)  :: 34 of 160
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7762022
                     /organism="Streptomyces sp. iso_22"
                     /mol_type="genomic DNA"
                     /strain="iso_22"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569857"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBTR010000001-JBWBTR010000003
WGS_SCAFLD  NZ_JBWBTR010000001-NZ_JBWBTR010000003
//
LOCUS       NZ_JBCPTH010000000   2753085 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain EA2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPTH000000000
VERSION     NZ_JBCPTH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065880
            Assembly: GCF_045909675.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2753085)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2753085)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPTH000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPTH000000000.  This version of the
            project (01) has the accession number NZ_JBCPTH010000000, and
            consists of sequences JBCPTH010000001-JBCPTH010000141.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045909675.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:52:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,726
            CDSs (total)                      :: 2,670
            Genes (coding)                    :: 2,559
            CDSs (with protein)               :: 2,559
            Genes (RNA)                       :: 56
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 111
            CDSs (without protein)            :: 111
            Pseudo Genes (ambiguous residues) :: 1 of 111
            Pseudo Genes (frameshifted)       :: 58 of 111
            Pseudo Genes (incomplete)         :: 45 of 111
            Pseudo Genes (internal stop)      :: 20 of 111
            Pseudo Genes (multiple problems)  :: 10 of 111
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2753085
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="EA2"
                     /isolation_source="Raw milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Inner Mongolia autonomous region"
                     /collection_date="2020-08"
                     /collected_by="Zekun Li"
WGS         JBCPTH010000001-JBCPTH010000141
WGS_SCAFLD  NZ_JBCPTH010000001-NZ_JBCPTH010000141
//
LOCUS       NZ_JAYDBU010000000   4311046 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae strain 18-VB00676, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAYDBU000000000
VERSION     NZ_JAYDBU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37977908
            Assembly: GCF_037462435.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4311046)
  AUTHORS   Fleischmann,S.
  TITLE     NOVC from German coastal regions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4311046)
  AUTHORS   Fleischmann,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) School of Veterinary Medicine; Institute of
            Food Safety and Food Hygiene, Freie Universitaet Berlin, Koenigsweg
            69, Berlin 14163, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAYDBU000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JAYDBU000000000.  This version of the project
            (01) has the accession number NZ_JAYDBU010000000, and consists of
            sequences JAYDBU010000001-JAYDBU010000286.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 6x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037462435.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:35:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,197
            CDSs (total)                      :: 4,078
            Genes (coding)                    :: 3,935
            CDSs (with protein)               :: 3,935
            Genes (RNA)                       :: 119
            rRNAs                             :: 7, 11, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 6 (5S)
            partial rRNAs                     :: 1, 11, 8 (5S, 16S, 23S)
            tRNAs                             :: 89
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 143
            CDSs (without protein)            :: 143
            Pseudo Genes (ambiguous residues) :: 0 of 143
            Pseudo Genes (frameshifted)       :: 31 of 143
            Pseudo Genes (incomplete)         :: 110 of 143
            Pseudo Genes (internal stop)      :: 24 of 143
            Pseudo Genes (multiple problems)  :: 22 of 143
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4311046
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /strain="18-VB00676"
                     /serotype="non-O1/non-O139"
                     /isolation_source="water"
                     /db_xref="taxon:666"
                     /geo_loc_name="Germany: Baltic Sea"
                     /collection_date="2018-09-03"
WGS         JAYDBU010000001-JAYDBU010000286
WGS_SCAFLD  NZ_JAYDBU010000001-NZ_JAYDBU010000286
//
LOCUS       NZ_JBCPTP010000000   2832130 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain BA2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPTP000000000
VERSION     NZ_JBCPTP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065872
            Assembly: GCF_045909875.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2832130)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2832130)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPTP000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPTP000000000.  This version of the
            project (01) has the accession number NZ_JBCPTP010000000, and
            consists of sequences JBCPTP010000001-JBCPTP010000154.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045909875.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:54:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,839
            CDSs (total)                      :: 2,780
            Genes (coding)                    :: 2,655
            CDSs (with protein)               :: 2,655
            Genes (RNA)                       :: 59
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 51
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 125
            CDSs (without protein)            :: 125
            Pseudo Genes (ambiguous residues) :: 0 of 125
            Pseudo Genes (frameshifted)       :: 55 of 125
            Pseudo Genes (incomplete)         :: 53 of 125
            Pseudo Genes (internal stop)      :: 32 of 125
            Pseudo Genes (multiple problems)  :: 14 of 125
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2832130
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="BA2"
                     /isolation_source="Raw milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Henan"
                     /collection_date="2020-06"
                     /collected_by="Zekun Li"
WGS         JBCPTP010000001-JBCPTP010000154
WGS_SCAFLD  NZ_JBCPTP010000001-NZ_JBCPTP010000154
//
LOCUS       NZ_JBCPTZ010000000   2813586 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain 79, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPTZ000000000
VERSION     NZ_JBCPTZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065862
            Assembly: GCF_045910075.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2813586)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2813586)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPTZ000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPTZ000000000.  This version of the
            project (01) has the accession number NZ_JBCPTZ010000000, and
            consists of sequences JBCPTZ010000001-JBCPTZ010000122.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045910075.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:53:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,860
            CDSs (total)                      :: 2,800
            Genes (coding)                    :: 2,657
            CDSs (with protein)               :: 2,657
            Genes (RNA)                       :: 60
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 143
            CDSs (without protein)            :: 143
            Pseudo Genes (ambiguous residues) :: 0 of 143
            Pseudo Genes (frameshifted)       :: 56 of 143
            Pseudo Genes (incomplete)         :: 70 of 143
            Pseudo Genes (internal stop)      :: 30 of 143
            Pseudo Genes (multiple problems)  :: 13 of 143
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2813586
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="79"
                     /isolation_source="Raw milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Henan"
                     /collection_date="2020-06"
                     /collected_by="Zekun Li"
WGS         JBCPTZ010000001-JBCPTZ010000122
WGS_SCAFLD  NZ_JBCPTZ010000001-NZ_JBCPTZ010000122
//
LOCUS       NZ_JBAFTT010000000   4140095 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae strain 18-VB00564, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBAFTT000000000
VERSION     NZ_JBAFTT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37977897
            Assembly: GCF_037462655.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4140095)
  AUTHORS   Fleischmann,S.
  TITLE     NOVC from German coastal regions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4140095)
  AUTHORS   Fleischmann,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JAN-2024) School of Veterinary Medicine; Institute of
            Food Safety and Food Hygiene, Freie Universitaet Berlin, Koenigsweg
            69, Berlin 14163, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAFTT000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JBAFTT000000000.  This version of the project
            (01) has the accession number NZ_JBAFTT010000000, and consists of
            sequences JBAFTT010000001-JBAFTT010000291.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 11x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037462655.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:32:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,980
            CDSs (total)                      :: 3,860
            Genes (coding)                    :: 3,694
            CDSs (with protein)               :: 3,694
            Genes (RNA)                       :: 120
            rRNAs                             :: 9, 10, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1 (5S, 23S)
            partial rRNAs                     :: 2, 10, 3 (5S, 16S, 23S)
            tRNAs                             :: 93
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 166
            CDSs (without protein)            :: 166
            Pseudo Genes (ambiguous residues) :: 0 of 166
            Pseudo Genes (frameshifted)       :: 36 of 166
            Pseudo Genes (incomplete)         :: 127 of 166
            Pseudo Genes (internal stop)      :: 29 of 166
            Pseudo Genes (multiple problems)  :: 26 of 166
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4140095
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /strain="18-VB00564"
                     /serotype="non-O1/non-O139"
                     /isolation_source="water"
                     /db_xref="taxon:666"
                     /geo_loc_name="Germany: Baltic Sea"
                     /collection_date="2018-09-03"
WGS         JBAFTT010000001-JBAFTT010000291
WGS_SCAFLD  NZ_JBAFTT010000001-NZ_JBAFTT010000291
//
LOCUS       NZ_JBCPUI010000000   2762028 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain 64, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPUI000000000
VERSION     NZ_JBCPUI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065853
            Assembly: GCF_045910255.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2762028)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2762028)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPUI000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPUI000000000.  This version of the
            project (01) has the accession number NZ_JBCPUI010000000, and
            consists of sequences JBCPUI010000001-JBCPUI010000086.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045910255.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:50:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,784
            CDSs (total)                      :: 2,724
            Genes (coding)                    :: 2,595
            CDSs (with protein)               :: 2,595
            Genes (RNA)                       :: 60
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 129
            CDSs (without protein)            :: 129
            Pseudo Genes (ambiguous residues) :: 0 of 129
            Pseudo Genes (frameshifted)       :: 56 of 129
            Pseudo Genes (incomplete)         :: 58 of 129
            Pseudo Genes (internal stop)      :: 31 of 129
            Pseudo Genes (multiple problems)  :: 15 of 129
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2762028
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="64"
                     /isolation_source="Raw milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Henan"
                     /collection_date="2020-06"
                     /collected_by="Zekun Li"
WGS         JBCPUI010000001-JBCPUI010000086
WGS_SCAFLD  NZ_JBCPUI010000001-NZ_JBCPUI010000086
//
LOCUS       NZ_JBCPUP010000000   2816341 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain 54, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPUP000000000
VERSION     NZ_JBCPUP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065846
            Assembly: GCF_045910395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2816341)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2816341)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPUP000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPUP000000000.  This version of the
            project (01) has the accession number NZ_JBCPUP010000000, and
            consists of sequences JBCPUP010000001-JBCPUP010000157.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045910395.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 14:07:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,853
            CDSs (total)                      :: 2,791
            Genes (coding)                    :: 2,685
            CDSs (with protein)               :: 2,685
            Genes (RNA)                       :: 62
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 2, 1 (5S, 16S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 106
            CDSs (without protein)            :: 106
            Pseudo Genes (ambiguous residues) :: 0 of 106
            Pseudo Genes (frameshifted)       :: 51 of 106
            Pseudo Genes (incomplete)         :: 55 of 106
            Pseudo Genes (internal stop)      :: 23 of 106
            Pseudo Genes (multiple problems)  :: 19 of 106
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2816341
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="54"
                     /isolation_source="Raw milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Henan"
                     /collection_date="2020-06"
                     /collected_by="Zekun Li"
WGS         JBCPUP010000001-JBCPUP010000157
WGS_SCAFLD  NZ_JBCPUP010000001-NZ_JBCPUP010000157
//
LOCUS       NZ_JBAFTV010000000   4021206 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae strain 18-VB00561, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBAFTV000000000
VERSION     NZ_JBAFTV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37977895
            Assembly: GCF_037462695.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4021206)
  AUTHORS   Fleischmann,S.
  TITLE     NOVC from German coastal regions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4021206)
  AUTHORS   Fleischmann,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JAN-2024) School of Veterinary Medicine; Institute of
            Food Safety and Food Hygiene, Freie Universitaet Berlin, Koenigsweg
            69, Berlin 14163, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAFTV000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JBAFTV000000000.  This version of the project
            (01) has the accession number NZ_JBAFTV010000000, and consists of
            sequences JBAFTV010000001-JBAFTV010000315.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 16x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037462695.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:34:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,813
            CDSs (total)                      :: 3,690
            Genes (coding)                    :: 3,525
            CDSs (with protein)               :: 3,525
            Genes (RNA)                       :: 123
            rRNAs                             :: 9, 12, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 1 (5S, 16S)
            partial rRNAs                     :: 1, 11, 6 (5S, 16S, 23S)
            tRNAs                             :: 92
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 165
            CDSs (without protein)            :: 165
            Pseudo Genes (ambiguous residues) :: 0 of 165
            Pseudo Genes (frameshifted)       :: 42 of 165
            Pseudo Genes (incomplete)         :: 124 of 165
            Pseudo Genes (internal stop)      :: 21 of 165
            Pseudo Genes (multiple problems)  :: 20 of 165
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4021206
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /strain="18-VB00561"
                     /serotype="non-O1/non-O139"
                     /isolation_source="water"
                     /db_xref="taxon:666"
                     /geo_loc_name="Germany: Baltic Sea"
                     /collection_date="2018-09-03"
WGS         JBAFTV010000001-JBAFTV010000315
WGS_SCAFLD  NZ_JBAFTV010000001-NZ_JBAFTV010000315
//
LOCUS       NZ_JBWBTU010000000   7193261 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Streptomyces sp. iso_23, whole genome shotgun sequencing project.
ACCESSION   NZ_JBWBTU000000000
VERSION     NZ_JBWBTU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449795
            Assembly: GCF_056172965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces sp. iso_23
  ORGANISM  Streptomyces sp. iso_23
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 7193261)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 7193261)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBTU000000000.1.
            The Streptomyces sp. iso_23 whole genome shotgun (WGS) project has
            the project accession NZ_JBWBTU000000000.  This version of the
            project (01) has the accession number NZ_JBWBTU010000000, and
            consists of sequences JBWBTU010000001-JBWBTU010000026.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 143.2x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172965.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 18:43:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,139
            CDSs (total)                      :: 6,047
            Genes (coding)                    :: 5,929
            CDSs (with protein)               :: 5,929
            Genes (RNA)                       :: 92
            rRNAs                             :: 7, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 118
            CDSs (without protein)            :: 118
            Pseudo Genes (ambiguous residues) :: 0 of 118
            Pseudo Genes (frameshifted)       :: 53 of 118
            Pseudo Genes (incomplete)         :: 86 of 118
            Pseudo Genes (internal stop)      :: 10 of 118
            Pseudo Genes (multiple problems)  :: 29 of 118
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7193261
                     /organism="Streptomyces sp. iso_23"
                     /mol_type="genomic DNA"
                     /strain="iso_23"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569854"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBTU010000001-JBWBTU010000026
WGS_SCAFLD  NZ_JBWBTU010000001-NZ_JBWBTU010000026
//
LOCUS       NZ_JBPJZU010000000   4990094 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Variovorax sucrosi strain ZT4R33, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBPJZU000000000
VERSION     NZ_JBPJZU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN49534245
            Assembly: GCF_051216635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Variovorax sucrosi
  ORGANISM  Variovorax sucrosi
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Variovorax.
REFERENCE   1  (bases 1 to 4990094)
  AUTHORS   Chen,Z. and Liu,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUN-2025) CGMCC, Institute of Microbiology, Chinese
            Academy of Sciences, NO. 1 West Beichen, Chaoyang District,
            Beijing, Beijing 100101, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPJZU000000000.1.
            The Variovorax sucrosi whole genome shotgun (WGS) project has the
            project accession NZ_JBPJZU000000000.  This version of the project
            (01) has the accession number NZ_JBPJZU010000000, and consists of
            sequences JBPJZU010000001-JBPJZU010000022.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051216635.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:03:12
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,771
            CDSs (total)                      :: 4,715
            Genes (coding)                    :: 4,671
            CDSs (with protein)               :: 4,671
            Genes (RNA)                       :: 56
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 44
            CDSs (without protein)            :: 44
            Pseudo Genes (ambiguous residues) :: 0 of 44
            Pseudo Genes (frameshifted)       :: 10 of 44
            Pseudo Genes (incomplete)         :: 38 of 44
            Pseudo Genes (internal stop)      :: 2 of 44
            Pseudo Genes (multiple problems)  :: 6 of 44
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4990094
                     /organism="Variovorax sucrosi"
                     /mol_type="genomic DNA"
                     /strain="ZT4R33"
                     /isolation_source="glacier"
                     /culture_collection="CGMCC:1.25067"
                     /type_material="type strain of Variovorax sucrosi"
                     /db_xref="taxon:3443743"
                     /geo_loc_name="China"
                     /collection_date="2016-10"
WGS         JBPJZU010000001-JBPJZU010000022
WGS_SCAFLD  NZ_JBPJZU010000001-NZ_JBPJZU010000022
//
LOCUS       NZ_CDVBYS010000000   4742945 bp    DNA     linear   ENV 27-MAR-2026
DEFINITION  MAG: Thalassospira xiamenensis isolate MarMAG_029637, whole genome
            shotgun sequencing project.
ACCESSION   NZ_CDVBYS000000000
VERSION     NZ_CDVBYS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120735761
            Assembly: GCF_977646585.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Thalassospira xiamenensis (subsurface metagenome)
  ORGANISM  Thalassospira xiamenensis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodospirillales; Thalassospiraceae; Thalassospira.
REFERENCE   1  (bases 1 to 4742945)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVBYS000000000.1.
            The Thalassospira xiamenensis whole genome shotgun (WGS) project
            has the project accession NZ_CDVBYS000000000.  This version of the
            project (01) has the accession number NZ_CDVBYS010000000, and
            consists of sequences CDVBYS010000001-CDVBYS010000039.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977646585.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 01:36:58
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,438
            CDSs (total)                      :: 4,387
            Genes (coding)                    :: 4,375
            CDSs (with protein)               :: 4,375
            Genes (RNA)                       :: 51
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 12
            CDSs (without protein)            :: 12
            Pseudo Genes (ambiguous residues) :: 0 of 12
            Pseudo Genes (frameshifted)       :: 1 of 12
            Pseudo Genes (incomplete)         :: 11 of 12
            Pseudo Genes (internal stop)      :: 0 of 12
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4742945
                     /organism="Thalassospira xiamenensis"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_029637"
                     /db_xref="taxon:220697"
                     /environmental_sample
                     /geo_loc_name="Atlantic Ocean"
                     /collection_date="2014-04-05"
                     /metagenome_source="subsurface metagenome"
                     /metagenomic
WGS         CDVBYS010000001-CDVBYS010000039
WGS_SCAFLD  NZ_CDVBYS010000001-NZ_CDVBYS010000039
//
LOCUS       NZ_JAYDBZ010000000   3973967 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae strain 18-VB00593, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAYDBZ000000000
VERSION     NZ_JAYDBZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37977903
            Assembly: GCF_037462545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 3973967)
  AUTHORS   Fleischmann,S.
  TITLE     NOVC from German coastal regions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3973967)
  AUTHORS   Fleischmann,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) School of Veterinary Medicine; Institute of
            Food Safety and Food Hygiene, Freie Universitaet Berlin, Koenigsweg
            69, Berlin 14163, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAYDBZ000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JAYDBZ000000000.  This version of the project
            (01) has the accession number NZ_JAYDBZ010000000, and consists of
            sequences JAYDBZ010000001-JAYDBZ010000211.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037462545.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:29:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,752
            CDSs (total)                      :: 3,617
            Genes (coding)                    :: 3,525
            CDSs (with protein)               :: 3,525
            Genes (RNA)                       :: 135
            rRNAs                             :: 11, 15, 11 (5S, 16S, 23S)
            complete rRNAs                    :: 9 (5S)
            partial rRNAs                     :: 2, 15, 11 (5S, 16S, 23S)
            tRNAs                             :: 94
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 92
            CDSs (without protein)            :: 92
            Pseudo Genes (ambiguous residues) :: 0 of 92
            Pseudo Genes (frameshifted)       :: 24 of 92
            Pseudo Genes (incomplete)         :: 71 of 92
            Pseudo Genes (internal stop)      :: 12 of 92
            Pseudo Genes (multiple problems)  :: 15 of 92
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3973967
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /strain="18-VB00593"
                     /serotype="non-O1/non-O139"
                     /isolation_source="water"
                     /db_xref="taxon:666"
                     /geo_loc_name="Germany: Baltic Sea"
                     /collection_date="2018-07-23"
WGS         JAYDBZ010000001-JAYDBZ010000211
WGS_SCAFLD  NZ_JAYDBZ010000001-NZ_JAYDBZ010000211
//
LOCUS       NZ_JBLWIE010000000   2205648 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Thermoanaerobacter mathranii strain LV49, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBLWIE000000000
VERSION     NZ_JBLWIE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN46555815
            Assembly: GCF_048381635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Thermoanaerobacter mathranii
  ORGANISM  Thermoanaerobacter mathranii
            Bacteria; Bacillati; Bacillota; Clostridia; Thermoanaerobacterales;
            Thermoanaerobacteraceae; Thermoanaerobacter; Thermoanaerobacter
            thermocopriae group.
REFERENCE   1  (bases 1 to 2205648)
  AUTHORS   Ryzhmanova,Y.V., Makhortykh,S., Shcherbakova,V.A. and Delegan,Y.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-FEB-2025) Skryabin Institute of Biochemistry and
            Physiology of Microorganisms, Russian Academy of Sciences, Federal
            Research Center 'Pushchino Scientific Center for Biological
            Research of the RAS', prospect Nauki 5, Pushchino 142290, Russia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBLWIE000000000.1.
            The Thermoanaerobacter mathranii whole genome shotgun (WGS) project
            has the project accession NZ_JBLWIE000000000.  This version of the
            project (01) has the accession number NZ_JBLWIE010000000, and
            consists of sequences JBLWIE010000001-JBLWIE010000025.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from VKM:B-3745.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 658.0x
            Sequencing Technology  :: MGI G-50
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_048381635.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:34:53
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,225
            CDSs (total)                      :: 2,165
            Genes (coding)                    :: 2,121
            CDSs (with protein)               :: 2,121
            Genes (RNA)                       :: 60
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 51
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 44
            CDSs (without protein)            :: 44
            Pseudo Genes (ambiguous residues) :: 0 of 44
            Pseudo Genes (frameshifted)       :: 22 of 44
            Pseudo Genes (incomplete)         :: 27 of 44
            Pseudo Genes (internal stop)      :: 8 of 44
            Pseudo Genes (multiple problems)  :: 13 of 44
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2205648
                     /organism="Thermoanaerobacter mathranii"
                     /mol_type="genomic DNA"
                     /strain="LV49"
                     /isolation_source="bottom sediments"
                     /culture_collection="VKM:B-3745"
                     /db_xref="taxon:583357"
                     /lab_host="laboratory of anaerobic microorganisms"
                     /geo_loc_name="Russia: Okhotsk Sea"
                     /lat_lon="51.0501 N 155.3156 E"
                     /collection_date="2023"
                     /collected_by="Ryzhmanova Y., Makhortykh S."
WGS         JBLWIE010000001-JBLWIE010000025
WGS_SCAFLD  NZ_JBLWIE010000001-NZ_JBLWIE010000025
//
LOCUS       NZ_JAYDCG010000000   3980305 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae strain 18-VB00273, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAYDCG000000000
VERSION     NZ_JAYDCG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37977887
            Assembly: GCF_037462855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 3980305)
  AUTHORS   Fleischmann,S.
  TITLE     NOVC from German coastal regions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3980305)
  AUTHORS   Fleischmann,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) School of Veterinary Medicine; Institute of
            Food Safety and Food Hygiene, Freie Universitaet Berlin, Koenigsweg
            69, Berlin 14163, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAYDCG000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JAYDCG000000000.  This version of the project
            (01) has the accession number NZ_JAYDCG010000000, and consists of
            sequences JAYDCG010000001-JAYDCG010000179.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 8x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037462855.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:34:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,703
            CDSs (total)                      :: 3,592
            Genes (coding)                    :: 3,525
            CDSs (with protein)               :: 3,525
            Genes (RNA)                       :: 111
            rRNAs                             :: 5, 10, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 5 (5S)
            partial rRNAs                     :: 10, 6 (16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 67
            CDSs (without protein)            :: 67
            Pseudo Genes (ambiguous residues) :: 0 of 67
            Pseudo Genes (frameshifted)       :: 20 of 67
            Pseudo Genes (incomplete)         :: 47 of 67
            Pseudo Genes (internal stop)      :: 9 of 67
            Pseudo Genes (multiple problems)  :: 9 of 67
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3980305
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /strain="18-VB00273"
                     /serotype="non-O1/non-O139"
                     /isolation_source="sediment"
                     /db_xref="taxon:666"
                     /geo_loc_name="Germany: Baltic Sea"
                     /collection_date="2017-09-18"
WGS         JAYDCG010000001-JAYDCG010000179
WGS_SCAFLD  NZ_JAYDCG010000001-NZ_JAYDCG010000179
//
LOCUS       NZ_JBPJZH010000000   5559816 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Variovorax restrictus strain LT1P1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBPJZH000000000
VERSION     NZ_JBPJZH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN49534232
            Assembly: GCF_051216715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Variovorax restrictus
  ORGANISM  Variovorax restrictus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Variovorax.
REFERENCE   1  (bases 1 to 5559816)
  AUTHORS   Chen,Z. and Liu,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUN-2025) CGMCC, Institute of Microbiology, Chinese
            Academy of Sciences, NO. 1 West Beichen, Chaoyang District,
            Beijing, Beijing 100101, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPJZH000000000.1.
            The Variovorax restrictus whole genome shotgun (WGS) project has
            the project accession NZ_JBPJZH000000000.  This version of the
            project (01) has the accession number NZ_JBPJZH010000000, and
            consists of sequences JBPJZH010000001-JBPJZH010000021.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051216715.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:10:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,321
            CDSs (total)                      :: 5,265
            Genes (coding)                    :: 5,207
            CDSs (with protein)               :: 5,207
            Genes (RNA)                       :: 56
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 58
            CDSs (without protein)            :: 58
            Pseudo Genes (ambiguous residues) :: 0 of 58
            Pseudo Genes (frameshifted)       :: 22 of 58
            Pseudo Genes (incomplete)         :: 41 of 58
            Pseudo Genes (internal stop)      :: 9 of 58
            Pseudo Genes (multiple problems)  :: 13 of 58
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5559816
                     /organism="Variovorax restrictus"
                     /mol_type="genomic DNA"
                     /strain="LT1P1"
                     /isolation_source="glacier"
                     /culture_collection="CGMCC:1.11725"
                     /type_material="type strain of Variovorax restrictus"
                     /db_xref="taxon:3443730"
                     /geo_loc_name="China"
                     /collection_date="2016-10"
WGS         JBPJZH010000001-JBPJZH010000021
WGS_SCAFLD  NZ_JBPJZH010000001-NZ_JBPJZH010000021
//
LOCUS       NZ_JAYDCB010000000   4011078 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae strain 18-VB00588, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAYDCB000000000
VERSION     NZ_JAYDCB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37977900
            Assembly: GCF_037462595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4011078)
  AUTHORS   Fleischmann,S.
  TITLE     NOVC from German coastal regions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4011078)
  AUTHORS   Fleischmann,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) School of Veterinary Medicine; Institute of
            Food Safety and Food Hygiene, Freie Universitaet Berlin, Koenigsweg
            69, Berlin 14163, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAYDCB000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JAYDCB000000000.  This version of the project
            (01) has the accession number NZ_JAYDCB010000000, and consists of
            sequences JAYDCB010000001-JAYDCB010000117.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 5x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037462595.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:28:39
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,753
            CDSs (total)                      :: 3,619
            Genes (coding)                    :: 3,545
            CDSs (with protein)               :: 3,545
            Genes (RNA)                       :: 134
            rRNAs                             :: 9, 17, 11 (5S, 16S, 23S)
            complete rRNAs                    :: 8 (5S)
            partial rRNAs                     :: 1, 17, 11 (5S, 16S, 23S)
            tRNAs                             :: 93
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 74
            CDSs (without protein)            :: 74
            Pseudo Genes (ambiguous residues) :: 0 of 74
            Pseudo Genes (frameshifted)       :: 20 of 74
            Pseudo Genes (incomplete)         :: 55 of 74
            Pseudo Genes (internal stop)      :: 9 of 74
            Pseudo Genes (multiple problems)  :: 10 of 74
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4011078
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /strain="18-VB00588"
                     /serotype="non-O1/non-O139"
                     /isolation_source="water"
                     /db_xref="taxon:666"
                     /geo_loc_name="Germany: Baltic Sea"
                     /collection_date="2018-07-23"
WGS         JAYDCB010000001-JAYDCB010000117
WGS_SCAFLD  NZ_JAYDCB010000001-NZ_JAYDCB010000117
//
LOCUS       NZ_JAYDCH010000000   4025134 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae strain 18-VB00162, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAYDCH000000000
VERSION     NZ_JAYDCH000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37977883
            Assembly: GCF_037462895.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4025134)
  AUTHORS   Fleischmann,S.
  TITLE     NOVC from German coastal regions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4025134)
  AUTHORS   Fleischmann,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) School of Veterinary Medicine; Institute of
            Food Safety and Food Hygiene, Freie Universitaet Berlin, Koenigsweg
            69, Berlin 14163, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAYDCH000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JAYDCH000000000.  This version of the project
            (01) has the accession number NZ_JAYDCH010000000, and consists of
            sequences JAYDCH010000001-JAYDCH010000142.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 5x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037462895.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:24:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,747
            CDSs (total)                      :: 3,625
            Genes (coding)                    :: 3,564
            CDSs (with protein)               :: 3,564
            Genes (RNA)                       :: 122
            rRNAs                             :: 7, 9, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1 (5S, 16S)
            partial rRNAs                     :: 8, 8 (16S, 23S)
            tRNAs                             :: 94
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 61
            CDSs (without protein)            :: 61
            Pseudo Genes (ambiguous residues) :: 0 of 61
            Pseudo Genes (frameshifted)       :: 24 of 61
            Pseudo Genes (incomplete)         :: 40 of 61
            Pseudo Genes (internal stop)      :: 11 of 61
            Pseudo Genes (multiple problems)  :: 13 of 61
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4025134
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /strain="18-VB00162"
                     /serotype="non-O1/non-O139"
                     /isolation_source="sediment"
                     /db_xref="taxon:666"
                     /geo_loc_name="Germany: North Sea"
                     /collection_date="2017-08-06"
WGS         JAYDCH010000001-JAYDCH010000142
WGS_SCAFLD  NZ_JAYDCH010000001-NZ_JAYDCH010000142
//
LOCUS       NZ_JBPJZT010000000   7455792 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Variovorax glacialis strain GT1P44, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBPJZT000000000
VERSION     NZ_JBPJZT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN49534244
            Assembly: GCF_051216375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Variovorax glacialis
  ORGANISM  Variovorax glacialis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Variovorax.
REFERENCE   1  (bases 1 to 7455792)
  AUTHORS   Chen,Z. and Liu,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUN-2025) CGMCC, Institute of Microbiology, Chinese
            Academy of Sciences, NO. 1 West Beichen, Chaoyang District,
            Beijing, Beijing 100101, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPJZT000000000.1.
            The Variovorax glacialis whole genome shotgun (WGS) project has the
            project accession NZ_JBPJZT000000000.  This version of the project
            (01) has the accession number NZ_JBPJZT010000000, and consists of
            sequences JBPJZT010000001-JBPJZT010000070.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051216375.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:15:04
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,126
            CDSs (total)                      :: 7,075
            Genes (coding)                    :: 6,941
            CDSs (with protein)               :: 6,941
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 45
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 134
            CDSs (without protein)            :: 134
            Pseudo Genes (ambiguous residues) :: 0 of 134
            Pseudo Genes (frameshifted)       :: 52 of 134
            Pseudo Genes (incomplete)         :: 106 of 134
            Pseudo Genes (internal stop)      :: 9 of 134
            Pseudo Genes (multiple problems)  :: 30 of 134
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7455792
                     /organism="Variovorax glacialis"
                     /mol_type="genomic DNA"
                     /strain="GT1P44"
                     /isolation_source="glacier"
                     /culture_collection="CGMCC:1.24874"
                     /type_material="type strain of Variovorax glacialis"
                     /db_xref="taxon:3443742"
                     /geo_loc_name="China"
                     /collection_date="2016-10"
WGS         JBPJZT010000001-JBPJZT010000070
WGS_SCAFLD  NZ_JBPJZT010000001-NZ_JBPJZT010000070
//
LOCUS       NZ_JBPJZJ010000000   6988622 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Variovorax pasteuri strain RB3P1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBPJZJ000000000
VERSION     NZ_JBPJZJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN49534234
            Assembly: GCF_051216455.1
KEYWORDS    WGS; RefSeq.
SOURCE      Variovorax pasteuri
  ORGANISM  Variovorax pasteuri
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Variovorax.
REFERENCE   1  (bases 1 to 6988622)
  AUTHORS   Chen,Z. and Liu,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUN-2025) CGMCC, Institute of Microbiology, Chinese
            Academy of Sciences, NO. 1 West Beichen, Chaoyang District,
            Beijing, Beijing 100101, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPJZJ000000000.1.
            The Variovorax pasteuri whole genome shotgun (WGS) project has the
            project accession NZ_JBPJZJ000000000.  This version of the project
            (01) has the accession number NZ_JBPJZJ010000000, and consists of
            sequences JBPJZJ010000001-JBPJZJ010000063.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051216455.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:11:38
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,749
            CDSs (total)                      :: 6,694
            Genes (coding)                    :: 6,581
            CDSs (with protein)               :: 6,581
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 49
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 113
            CDSs (without protein)            :: 113
            Pseudo Genes (ambiguous residues) :: 0 of 113
            Pseudo Genes (frameshifted)       :: 39 of 113
            Pseudo Genes (incomplete)         :: 94 of 113
            Pseudo Genes (internal stop)      :: 10 of 113
            Pseudo Genes (multiple problems)  :: 27 of 113
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6988622
                     /organism="Variovorax pasteuri"
                     /mol_type="genomic DNA"
                     /strain="RB3P1"
                     /isolation_source="glacier"
                     /culture_collection="CGMCC:1.11853"
                     /type_material="type strain of Variovorax pasteuri"
                     /db_xref="taxon:3443732"
                     /geo_loc_name="China"
                     /collection_date="2016-10"
WGS         JBPJZJ010000001-JBPJZJ010000063
WGS_SCAFLD  NZ_JBPJZJ010000001-NZ_JBPJZJ010000063
//
LOCUS       NZ_JBPJZP010000000   6933974 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Variovorax monticola strain GB4P3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBPJZP000000000
VERSION     NZ_JBPJZP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN49534240
            Assembly: GCF_051216855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Variovorax monticola
  ORGANISM  Variovorax monticola
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Variovorax.
REFERENCE   1  (bases 1 to 6933974)
  AUTHORS   Chen,Z. and Liu,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUN-2025) CGMCC, Institute of Microbiology, Chinese
            Academy of Sciences, NO. 1 West Beichen, Chaoyang District,
            Beijing, Beijing 100101, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPJZP000000000.1.
            The Variovorax monticola whole genome shotgun (WGS) project has the
            project accession NZ_JBPJZP000000000.  This version of the project
            (01) has the accession number NZ_JBPJZP010000000, and consists of
            sequences JBPJZP010000001-JBPJZP010000015.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051216855.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:32:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,486
            CDSs (total)                      :: 6,432
            Genes (coding)                    :: 6,386
            CDSs (with protein)               :: 6,386
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 46
            CDSs (without protein)            :: 46
            Pseudo Genes (ambiguous residues) :: 0 of 46
            Pseudo Genes (frameshifted)       :: 8 of 46
            Pseudo Genes (incomplete)         :: 38 of 46
            Pseudo Genes (internal stop)      :: 2 of 46
            Pseudo Genes (multiple problems)  :: 2 of 46
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6933974
                     /organism="Variovorax monticola"
                     /mol_type="genomic DNA"
                     /strain="GB4P3"
                     /isolation_source="glacier"
                     /culture_collection="CGMCC:1.24632"
                     /type_material="type strain of Variovorax monticola"
                     /db_xref="taxon:3443738"
                     /geo_loc_name="China"
                     /collection_date="2016-10"
WGS         JBPJZP010000001-JBPJZP010000015
WGS_SCAFLD  NZ_JBPJZP010000001-NZ_JBPJZP010000015
//
LOCUS       NZ_VTYO01000000      4208211 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio anguillarum strain 00-84-1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_VTYO00000000
VERSION     NZ_VTYO00000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN12668401
            Assembly: GCF_013113825.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio anguillarum (Listonella anguillarum)
  ORGANISM  Vibrio anguillarum
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4208211)
  AUTHORS   Kehlet-Delgado,H. and Mueller,R.S.
  TITLE     Draft genome sequencing and comparative genomics of
            hatchery-associated Vibrios
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4208211)
  AUTHORS   Kehlet-Delgado,H. and Mueller,R.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-SEP-2019) Microbiology, Oregon State University,
            Oregon State University, Corvallis, OR 97331, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            VTYO00000000.1.
            The Vibrio anguillarum whole genome shotgun (WGS) project has the
            project accession NZ_VTYO00000000.  This version of the project
            (01) has the accession number NZ_VTYO01000000, and consists of
            sequences VTYO01000001-VTYO01000144.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: idba_ud v. 1.0.6
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_013113825.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:27:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,892
            CDSs (total)                      :: 3,817
            Genes (coding)                    :: 3,764
            CDSs (with protein)               :: 3,764
            Genes (RNA)                       :: 75
            rRNAs                             :: 2, 1 (5S, 16S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 68
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 53
            CDSs (without protein)            :: 53
            Pseudo Genes (ambiguous residues) :: 0 of 53
            Pseudo Genes (frameshifted)       :: 20 of 53
            Pseudo Genes (incomplete)         :: 34 of 53
            Pseudo Genes (internal stop)      :: 5 of 53
            Pseudo Genes (multiple problems)  :: 5 of 53
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4208211
                     /organism="Vibrio anguillarum"
                     /mol_type="genomic DNA"
                     /strain="00-84-1"
                     /host="Panopea generosa"
                     /db_xref="taxon:55601"
                     /geo_loc_name="USA: Washington, Puget Sound"
                     /collection_date="2000"
WGS         VTYO01000001-VTYO01000144
WGS_SCAFLD  NZ_VTYO01000001-NZ_VTYO01000144
//
LOCUS       NZ_JAYDBT010000000   4097275 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae strain 18-VB00677, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAYDBT000000000
VERSION     NZ_JAYDBT000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37977909
            Assembly: GCF_037462425.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4097275)
  AUTHORS   Fleischmann,S.
  TITLE     NOVC from German coastal regions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4097275)
  AUTHORS   Fleischmann,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) School of Veterinary Medicine; Institute of
            Food Safety and Food Hygiene, Freie Universitaet Berlin, Koenigsweg
            69, Berlin 14163, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAYDBT000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JAYDBT000000000.  This version of the project
            (01) has the accession number NZ_JAYDBT010000000, and consists of
            sequences JAYDBT010000001-JAYDBT010000181.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037462425.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:29:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,834
            CDSs (total)                      :: 3,720
            Genes (coding)                    :: 3,625
            CDSs (with protein)               :: 3,625
            Genes (RNA)                       :: 114
            rRNAs                             :: 8, 7, 3 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 1 (5S, 16S)
            partial rRNAs                     :: 6, 3 (16S, 23S)
            tRNAs                             :: 92
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 95
            CDSs (without protein)            :: 95
            Pseudo Genes (ambiguous residues) :: 0 of 95
            Pseudo Genes (frameshifted)       :: 28 of 95
            Pseudo Genes (incomplete)         :: 64 of 95
            Pseudo Genes (internal stop)      :: 12 of 95
            Pseudo Genes (multiple problems)  :: 9 of 95
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4097275
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /strain="18-VB00677"
                     /serotype="non-O1/non-O139"
                     /isolation_source="water"
                     /db_xref="taxon:666"
                     /geo_loc_name="Germany: Baltic Sea"
                     /collection_date="2018-09-03"
WGS         JAYDBT010000001-JAYDBT010000181
WGS_SCAFLD  NZ_JAYDBT010000001-NZ_JAYDBT010000181
//
LOCUS       NZ_JBAFUC010000000   4136942 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae strain 18-VB00270, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBAFUC000000000
VERSION     NZ_JBAFUC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37977885
            Assembly: GCF_037462885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4136942)
  AUTHORS   Fleischmann,S.
  TITLE     NOVC from German coastal regions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4136942)
  AUTHORS   Fleischmann,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-JAN-2024) School of Veterinary Medicine; Institute of
            Food Safety and Food Hygiene, Freie Universitaet Berlin, Koenigsweg
            69, Berlin 14163, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAFUC000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JBAFUC000000000.  This version of the project
            (01) has the accession number NZ_JBAFUC010000000, and consists of
            sequences JBAFUC010000001-JBAFUC010000338.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 11x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037462885.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:38:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,983
            CDSs (total)                      :: 3,869
            Genes (coding)                    :: 3,698
            CDSs (with protein)               :: 3,698
            Genes (RNA)                       :: 114
            rRNAs                             :: 9, 7, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2, 6, 1 (5S, 16S, 23S)
            tRNAs                             :: 92
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 171
            CDSs (without protein)            :: 171
            Pseudo Genes (ambiguous residues) :: 0 of 171
            Pseudo Genes (frameshifted)       :: 34 of 171
            Pseudo Genes (incomplete)         :: 133 of 171
            Pseudo Genes (internal stop)      :: 25 of 171
            Pseudo Genes (multiple problems)  :: 21 of 171
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4136942
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /strain="18-VB00270"
                     /serotype="non-O1/non-O139"
                     /isolation_source="water"
                     /db_xref="taxon:666"
                     /geo_loc_name="Germany: Baltic Sea"
                     /collection_date="2017-09-18"
WGS         JBAFUC010000001-JBAFUC010000338
WGS_SCAFLD  NZ_JBAFUC010000001-NZ_JBAFUC010000338
//
LOCUS       NZ_JBWBTS010000000   8198348 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Streptomyces sp. iso_385, whole genome shotgun sequencing project.
ACCESSION   NZ_JBWBTS000000000
VERSION     NZ_JBWBTS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449797
            Assembly: GCF_056172925.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces sp. iso_385
  ORGANISM  Streptomyces sp. iso_385
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 8198348)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8198348)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBTS000000000.1.
            The Streptomyces sp. iso_385 whole genome shotgun (WGS) project has
            the project accession NZ_JBWBTS000000000.  This version of the
            project (01) has the accession number NZ_JBWBTS010000000, and
            consists of sequences JBWBTS010000001-JBWBTS010000073.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 100.7x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172925.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 18:43:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,316
            CDSs (total)                      :: 7,227
            Genes (coding)                    :: 7,089
            CDSs (with protein)               :: 7,089
            Genes (RNA)                       :: 89
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 68
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 138
            CDSs (without protein)            :: 138
            Pseudo Genes (ambiguous residues) :: 0 of 138
            Pseudo Genes (frameshifted)       :: 46 of 138
            Pseudo Genes (incomplete)         :: 109 of 138
            Pseudo Genes (internal stop)      :: 18 of 138
            Pseudo Genes (multiple problems)  :: 29 of 138
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8198348
                     /organism="Streptomyces sp. iso_385"
                     /mol_type="genomic DNA"
                     /strain="iso_385"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569856"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBTS010000001-JBWBTS010000073
WGS_SCAFLD  NZ_JBWBTS010000001-NZ_JBWBTS010000073
//
LOCUS       NZ_JBCPVW010000000   2802130 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain 121, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPVW000000000
VERSION     NZ_JBCPVW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065812
            Assembly: GCF_045911085.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2802130)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2802130)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPVW000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPVW000000000.  This version of the
            project (01) has the accession number NZ_JBCPVW010000000, and
            consists of sequences JBCPVW010000001-JBCPVW010000154.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045911085.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 14:05:56
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,804
            CDSs (total)                      :: 2,744
            Genes (coding)                    :: 2,628
            CDSs (with protein)               :: 2,628
            Genes (RNA)                       :: 60
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 116
            CDSs (without protein)            :: 116
            Pseudo Genes (ambiguous residues) :: 0 of 116
            Pseudo Genes (frameshifted)       :: 49 of 116
            Pseudo Genes (incomplete)         :: 61 of 116
            Pseudo Genes (internal stop)      :: 25 of 116
            Pseudo Genes (multiple problems)  :: 18 of 116
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2802130
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="121"
                     /isolation_source="Raw milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Henan"
                     /collection_date="2020-06"
                     /collected_by="Zekun Li"
WGS         JBCPVW010000001-JBCPVW010000154
WGS_SCAFLD  NZ_JBCPVW010000001-NZ_JBCPVW010000154
//
LOCUS       NZ_JBAFUF010000000   4074744 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae strain 18-VB00108, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBAFUF000000000
VERSION     NZ_JBAFUF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37977880
            Assembly: GCF_037462995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4074744)
  AUTHORS   Fleischmann,S.
  TITLE     NOVC from German coastal regions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4074744)
  AUTHORS   Fleischmann,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JAN-2024) School of Veterinary Medicine; Institute of
            Food Safety and Food Hygiene, Freie Universitaet Berlin, Koenigsweg
            69, Berlin 14163, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAFUF000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JBAFUF000000000.  This version of the project
            (01) has the accession number NZ_JBAFUF010000000, and consists of
            sequences JBAFUF010000001-JBAFUF010000178.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 18x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037462995.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:31:35
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,791
            CDSs (total)                      :: 3,675
            Genes (coding)                    :: 3,579
            CDSs (with protein)               :: 3,579
            Genes (RNA)                       :: 116
            rRNAs                             :: 6, 12, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1 (5S, 23S)
            partial rRNAs                     :: 12 (16S)
            tRNAs                             :: 93
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 96
            CDSs (without protein)            :: 96
            Pseudo Genes (ambiguous residues) :: 0 of 96
            Pseudo Genes (frameshifted)       :: 25 of 96
            Pseudo Genes (incomplete)         :: 67 of 96
            Pseudo Genes (internal stop)      :: 11 of 96
            Pseudo Genes (multiple problems)  :: 7 of 96
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4074744
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /strain="18-VB00108"
                     /serotype="non-O1/non-O139"
                     /isolation_source="water"
                     /db_xref="taxon:666"
                     /geo_loc_name="Germany: North Sea"
                     /collection_date="2017-08-15"
WGS         JBAFUF010000001-JBAFUF010000178
WGS_SCAFLD  NZ_JBAFUF010000001-NZ_JBAFUF010000178
//
LOCUS       NZ_JBCPWC010000000   2775225 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain 113, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPWC000000000
VERSION     NZ_JBCPWC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065806
            Assembly: GCF_045911255.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2775225)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2775225)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPWC000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPWC000000000.  This version of the
            project (01) has the accession number NZ_JBCPWC010000000, and
            consists of sequences JBCPWC010000001-JBCPWC010000100.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045911255.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:54:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,787
            CDSs (total)                      :: 2,726
            Genes (coding)                    :: 2,598
            CDSs (with protein)               :: 2,598
            Genes (RNA)                       :: 61
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 128
            CDSs (without protein)            :: 128
            Pseudo Genes (ambiguous residues) :: 0 of 128
            Pseudo Genes (frameshifted)       :: 53 of 128
            Pseudo Genes (incomplete)         :: 58 of 128
            Pseudo Genes (internal stop)      :: 30 of 128
            Pseudo Genes (multiple problems)  :: 13 of 128
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2775225
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="113"
                     /isolation_source="Raw milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Henan"
                     /collection_date="2020-06"
                     /collected_by="Zekun Li"
WGS         JBCPWC010000001-JBCPWC010000100
WGS_SCAFLD  NZ_JBCPWC010000001-NZ_JBCPWC010000100
//
LOCUS       NZ_JBAFTU010000000   4055271 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae strain 18-VB00563, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBAFTU000000000
VERSION     NZ_JBAFTU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37977896
            Assembly: GCF_037462635.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4055271)
  AUTHORS   Fleischmann,S.
  TITLE     NOVC from German coastal regions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4055271)
  AUTHORS   Fleischmann,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-JAN-2024) School of Veterinary Medicine; Institute of
            Food Safety and Food Hygiene, Freie Universitaet Berlin, Koenigsweg
            69, Berlin 14163, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAFTU000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JBAFTU000000000.  This version of the project
            (01) has the accession number NZ_JBAFTU010000000, and consists of
            sequences JBAFTU010000001-JBAFTU010000329.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 15x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037462635.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:31:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,863
            CDSs (total)                      :: 3,741
            Genes (coding)                    :: 3,584
            CDSs (with protein)               :: 3,584
            Genes (RNA)                       :: 122
            rRNAs                             :: 8, 12, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 6 (5S)
            partial rRNAs                     :: 2, 12, 8 (5S, 16S, 23S)
            tRNAs                             :: 90
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 157
            CDSs (without protein)            :: 157
            Pseudo Genes (ambiguous residues) :: 0 of 157
            Pseudo Genes (frameshifted)       :: 34 of 157
            Pseudo Genes (incomplete)         :: 123 of 157
            Pseudo Genes (internal stop)      :: 23 of 157
            Pseudo Genes (multiple problems)  :: 23 of 157
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4055271
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /strain="18-VB00563"
                     /serotype="non-O1/non-O139"
                     /isolation_source="water"
                     /db_xref="taxon:666"
                     /geo_loc_name="Germany: Baltic Sea"
                     /collection_date="2018-09-03"
WGS         JBAFTU010000001-JBAFTU010000329
WGS_SCAFLD  NZ_JBAFTU010000001-NZ_JBAFTU010000329
//
LOCUS       NZ_JBCPWL010000000   2720969 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain 7, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPWL000000000
VERSION     NZ_JBCPWL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065797
            Assembly: GCF_045911335.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2720969)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2720969)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPWL000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPWL000000000.  This version of the
            project (01) has the accession number NZ_JBCPWL010000000, and
            consists of sequences JBCPWL010000001-JBCPWL010000069.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045911335.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:59:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,720
            CDSs (total)                      :: 2,658
            Genes (coding)                    :: 2,565
            CDSs (with protein)               :: 2,565
            Genes (RNA)                       :: 62
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 2 (5S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 93
            CDSs (without protein)            :: 93
            Pseudo Genes (ambiguous residues) :: 0 of 93
            Pseudo Genes (frameshifted)       :: 46 of 93
            Pseudo Genes (incomplete)         :: 49 of 93
            Pseudo Genes (internal stop)      :: 21 of 93
            Pseudo Genes (multiple problems)  :: 19 of 93
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2720969
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="7"
                     /isolation_source="Raw milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Henan"
                     /collection_date="2020-06"
                     /collected_by="Zekun Li"
WGS         JBCPWL010000001-JBCPWL010000069
WGS_SCAFLD  NZ_JBCPWL010000001-NZ_JBCPWL010000069
//
LOCUS       NZ_JAYDCI010000000   3967421 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae strain 18-VB00160, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAYDCI000000000
VERSION     NZ_JAYDCI000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37977882
            Assembly: GCF_037462955.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 3967421)
  AUTHORS   Fleischmann,S.
  TITLE     NOVC from German coastal regions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3967421)
  AUTHORS   Fleischmann,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) School of Veterinary Medicine; Institute of
            Food Safety and Food Hygiene, Freie Universitaet Berlin, Koenigsweg
            69, Berlin 14163, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAYDCI000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JAYDCI000000000.  This version of the project
            (01) has the accession number NZ_JAYDCI010000000, and consists of
            sequences JAYDCI010000001-JAYDCI010000109.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 6x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037462955.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:33:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,704
            CDSs (total)                      :: 3,576
            Genes (coding)                    :: 3,515
            CDSs (with protein)               :: 3,515
            Genes (RNA)                       :: 128
            rRNAs                             :: 7, 12, 9 (5S, 16S, 23S)
            complete rRNAs                    :: 7 (5S)
            partial rRNAs                     :: 12, 9 (16S, 23S)
            tRNAs                             :: 96
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 61
            CDSs (without protein)            :: 61
            Pseudo Genes (ambiguous residues) :: 0 of 61
            Pseudo Genes (frameshifted)       :: 19 of 61
            Pseudo Genes (incomplete)         :: 40 of 61
            Pseudo Genes (internal stop)      :: 12 of 61
            Pseudo Genes (multiple problems)  :: 8 of 61
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3967421
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /strain="18-VB00160"
                     /serotype="non-O1/non-O139"
                     /isolation_source="water"
                     /db_xref="taxon:666"
                     /geo_loc_name="Germany: North Sea"
                     /collection_date="2017-08-06"
WGS         JAYDCI010000001-JAYDCI010000109
WGS_SCAFLD  NZ_JAYDCI010000001-NZ_JAYDCI010000109
//
LOCUS       NZ_JBCPUJ010000000   2784451 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain 63, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPUJ000000000
VERSION     NZ_JBCPUJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065852
            Assembly: GCF_045910295.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2784451)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2784451)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPUJ000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPUJ000000000.  This version of the
            project (01) has the accession number NZ_JBCPUJ010000000, and
            consists of sequences JBCPUJ010000001-JBCPUJ010000156.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045910295.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 14:02:01
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,787
            CDSs (total)                      :: 2,723
            Genes (coding)                    :: 2,608
            CDSs (with protein)               :: 2,608
            Genes (RNA)                       :: 64
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 2 (16S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 115
            CDSs (without protein)            :: 115
            Pseudo Genes (ambiguous residues) :: 0 of 115
            Pseudo Genes (frameshifted)       :: 45 of 115
            Pseudo Genes (incomplete)         :: 57 of 115
            Pseudo Genes (internal stop)      :: 29 of 115
            Pseudo Genes (multiple problems)  :: 15 of 115
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2784451
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="63"
                     /isolation_source="Raw milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Henan"
                     /collection_date="2020-06"
                     /collected_by="Zekun Li"
WGS         JBCPUJ010000001-JBCPUJ010000156
WGS_SCAFLD  NZ_JBCPUJ010000001-NZ_JBCPUJ010000156
//
LOCUS       NZ_JBWBTW010000000   8138564 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Streptomyces sp. iso_372, whole genome shotgun sequencing project.
ACCESSION   NZ_JBWBTW000000000
VERSION     NZ_JBWBTW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN54449793
            Assembly: GCF_056172995.1
KEYWORDS    WGS; RefSeq.
SOURCE      Streptomyces sp. iso_372
  ORGANISM  Streptomyces sp. iso_372
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Kitasatosporales; Streptomycetaceae; Streptomyces.
REFERENCE   1  (bases 1 to 8138564)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Endosphere and Rhizosphere Zostera marina associated bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 8138564)
  AUTHORS   Brache-Smith,D.-M.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2026) Molecular and Cell Biology, University of
            California Merced, 5200 Lake Rd, Merced, CA 95343, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBWBTW000000000.1.
            The Streptomyces sp. iso_372 whole genome shotgun (WGS) project has
            the project accession NZ_JBWBTW000000000.  This version of the
            project (01) has the accession number NZ_JBWBTW010000000, and
            consists of sequences JBWBTW010000001-JBWBTW010000027.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 04-FEB-2025
            Assembly Method        :: Flye v. v.2.9.5
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 50.3x
            Sequencing Technology  :: Oxford Nanopore PromethION
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_056172995.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 18:46:42
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,379
            CDSs (total)                      :: 7,289
            Genes (coding)                    :: 6,813
            CDSs (with protein)               :: 6,813
            Genes (RNA)                       :: 90
            rRNAs                             :: 6, 6, 6 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 6, 6 (5S, 16S, 23S)
            tRNAs                             :: 69
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 476
            CDSs (without protein)            :: 476
            Pseudo Genes (ambiguous residues) :: 0 of 476
            Pseudo Genes (frameshifted)       :: 217 of 476
            Pseudo Genes (incomplete)         :: 314 of 476
            Pseudo Genes (internal stop)      :: 23 of 476
            Pseudo Genes (multiple problems)  :: 74 of 476
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8138564
                     /organism="Streptomyces sp. iso_372"
                     /mol_type="genomic DNA"
                     /strain="iso_372"
                     /isolation_source="Marine intertidal mudflat"
                     /host="Zostera marina"
                     /db_xref="taxon:3569852"
                     /geo_loc_name="USA: Califronia, Bodega Bay"
                     /lat_lon="38.333446 N 123.058785 W"
                     /collection_date="2023-06-06"
WGS         JBWBTW010000001-JBWBTW010000027
WGS_SCAFLD  NZ_JBWBTW010000001-NZ_JBWBTW010000027
//
LOCUS       NZ_JAYDBV010000000   3979441 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae strain 18-VB00656, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JAYDBV000000000
VERSION     NZ_JAYDBV000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37977907
            Assembly: GCF_037462445.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 3979441)
  AUTHORS   Fleischmann,S.
  TITLE     NOVC from German coastal regions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3979441)
  AUTHORS   Fleischmann,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) School of Veterinary Medicine; Institute of
            Food Safety and Food Hygiene, Freie Universitaet Berlin, Koenigsweg
            69, Berlin 14163, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAYDBV000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JAYDBV000000000.  This version of the project
            (01) has the accession number NZ_JAYDBV010000000, and consists of
            sequences JAYDBV010000001-JAYDBV010000200.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 5x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037462445.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:32:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,794
            CDSs (total)                      :: 3,662
            Genes (coding)                    :: 3,569
            CDSs (with protein)               :: 3,569
            Genes (RNA)                       :: 132
            rRNAs                             :: 11, 12, 10 (5S, 16S, 23S)
            complete rRNAs                    :: 7 (5S)
            partial rRNAs                     :: 4, 12, 10 (5S, 16S, 23S)
            tRNAs                             :: 95
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 93
            CDSs (without protein)            :: 93
            Pseudo Genes (ambiguous residues) :: 0 of 93
            Pseudo Genes (frameshifted)       :: 24 of 93
            Pseudo Genes (incomplete)         :: 67 of 93
            Pseudo Genes (internal stop)      :: 5 of 93
            Pseudo Genes (multiple problems)  :: 3 of 93
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3979441
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /strain="18-VB00656"
                     /serotype="non-O1/non-O139"
                     /isolation_source="water"
                     /db_xref="taxon:666"
                     /geo_loc_name="Germany: Baltic Sea"
                     /collection_date="2018-09-03"
WGS         JAYDBV010000001-JAYDBV010000200
WGS_SCAFLD  NZ_JAYDBV010000001-NZ_JAYDBV010000200
//
LOCUS       NZ_JBAFTS010000000   4064370 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae strain 18-VB00589, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBAFTS000000000
VERSION     NZ_JBAFTS000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37977901
            Assembly: GCF_037462535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4064370)
  AUTHORS   Fleischmann,S.
  TITLE     NOVC from German coastal regions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4064370)
  AUTHORS   Fleischmann,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JAN-2024) School of Veterinary Medicine; Institute of
            Food Safety and Food Hygiene, Freie Universitaet Berlin, Koenigsweg
            69, Berlin 14163, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAFTS000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JBAFTS000000000.  This version of the project
            (01) has the accession number NZ_JBAFTS010000000, and consists of
            sequences JBAFTS010000001-JBAFTS010000236.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 9x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037462535.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:36:26
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,833
            CDSs (total)                      :: 3,704
            Genes (coding)                    :: 3,601
            CDSs (with protein)               :: 3,601
            Genes (RNA)                       :: 129
            rRNAs                             :: 10, 11, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8 (5S)
            partial rRNAs                     :: 2, 11, 8 (5S, 16S, 23S)
            tRNAs                             :: 96
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 103
            CDSs (without protein)            :: 103
            Pseudo Genes (ambiguous residues) :: 0 of 103
            Pseudo Genes (frameshifted)       :: 24 of 103
            Pseudo Genes (incomplete)         :: 80 of 103
            Pseudo Genes (internal stop)      :: 12 of 103
            Pseudo Genes (multiple problems)  :: 13 of 103
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4064370
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /strain="18-VB00589"
                     /serotype="non-O1/non-O139"
                     /isolation_source="water"
                     /db_xref="taxon:666"
                     /geo_loc_name="Germany: Baltic Sea"
                     /collection_date="2018-07-23"
WGS         JBAFTS010000001-JBAFTS010000236
WGS_SCAFLD  NZ_JBAFTS010000001-NZ_JBAFTS010000236
//
LOCUS       NZ_JBCPTF010000000   2726500 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain EA4, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPTF000000000
VERSION     NZ_JBCPTF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065882
            Assembly: GCF_045909715.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2726500)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2726500)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPTF000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPTF000000000.  This version of the
            project (01) has the accession number NZ_JBCPTF010000000, and
            consists of sequences JBCPTF010000001-JBCPTF010000154.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045909715.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:50:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,680
            CDSs (total)                      :: 2,622
            Genes (coding)                    :: 2,509
            CDSs (with protein)               :: 2,509
            Genes (RNA)                       :: 58
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 113
            CDSs (without protein)            :: 113
            Pseudo Genes (ambiguous residues) :: 1 of 113
            Pseudo Genes (frameshifted)       :: 59 of 113
            Pseudo Genes (incomplete)         :: 47 of 113
            Pseudo Genes (internal stop)      :: 22 of 113
            Pseudo Genes (multiple problems)  :: 12 of 113
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2726500
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="EA4"
                     /isolation_source="Raw milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Inner Mongolia autonomous region"
                     /collection_date="2020-08"
                     /collected_by="Zekun Li"
WGS         JBCPTF010000001-JBCPTF010000154
WGS_SCAFLD  NZ_JBCPTF010000001-NZ_JBCPTF010000154
//
LOCUS       NZ_JBPJZL010000000   7704432 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Variovorax multivorans strain ZT5R36, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPJZL000000000
VERSION     NZ_JBPJZL000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN49534236
            Assembly: GCF_051216835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Variovorax multivorans
  ORGANISM  Variovorax multivorans
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Variovorax.
REFERENCE   1  (bases 1 to 7704432)
  AUTHORS   Chen,Z. and Liu,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUN-2025) CGMCC, Institute of Microbiology, Chinese
            Academy of Sciences, NO. 1 West Beichen, Chaoyang District,
            Beijing, Beijing 100101, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPJZL000000000.1.
            The Variovorax multivorans whole genome shotgun (WGS) project has
            the project accession NZ_JBPJZL000000000.  This version of the
            project (01) has the accession number NZ_JBPJZL010000000, and
            consists of sequences JBPJZL010000001-JBPJZL010000055.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051216835.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:35:05
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,309
            CDSs (total)                      :: 7,247
            Genes (coding)                    :: 7,159
            CDSs (with protein)               :: 7,159
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 88
            CDSs (without protein)            :: 88
            Pseudo Genes (ambiguous residues) :: 0 of 88
            Pseudo Genes (frameshifted)       :: 22 of 88
            Pseudo Genes (incomplete)         :: 77 of 88
            Pseudo Genes (internal stop)      :: 6 of 88
            Pseudo Genes (multiple problems)  :: 16 of 88
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7704432
                     /organism="Variovorax multivorans"
                     /mol_type="genomic DNA"
                     /strain="ZT5R36"
                     /isolation_source="glacier"
                     /culture_collection="CGMCC:1.23587"
                     /type_material="type strain of Variovorax multivorans"
                     /db_xref="taxon:3443734"
                     /geo_loc_name="China"
                     /collection_date="2016-10"
WGS         JBPJZL010000001-JBPJZL010000055
WGS_SCAFLD  NZ_JBPJZL010000001-NZ_JBPJZL010000055
//
LOCUS       NZ_JBAFTW010000000   4021314 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae strain 18-VB00559, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBAFTW000000000
VERSION     NZ_JBAFTW000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37977894
            Assembly: GCF_037462705.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 4021314)
  AUTHORS   Fleischmann,S.
  TITLE     NOVC from German coastal regions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4021314)
  AUTHORS   Fleischmann,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JAN-2024) School of Veterinary Medicine; Institute of
            Food Safety and Food Hygiene, Freie Universitaet Berlin, Koenigsweg
            69, Berlin 14163, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAFTW000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JBAFTW000000000.  This version of the project
            (01) has the accession number NZ_JBAFTW010000000, and consists of
            sequences JBAFTW010000001-JBAFTW010000108.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 9x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037462705.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:33:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,696
            CDSs (total)                      :: 3,580
            Genes (coding)                    :: 3,509
            CDSs (with protein)               :: 3,509
            Genes (RNA)                       :: 116
            rRNAs                             :: 8, 7, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 7, 1 (5S, 16S)
            partial rRNAs                     :: 1, 6, 4 (5S, 16S, 23S)
            tRNAs                             :: 93
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 71
            CDSs (without protein)            :: 71
            Pseudo Genes (ambiguous residues) :: 0 of 71
            Pseudo Genes (frameshifted)       :: 30 of 71
            Pseudo Genes (incomplete)         :: 45 of 71
            Pseudo Genes (internal stop)      :: 12 of 71
            Pseudo Genes (multiple problems)  :: 14 of 71
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4021314
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /strain="18-VB00559"
                     /serotype="non-O1/non-O139"
                     /isolation_source="water"
                     /db_xref="taxon:666"
                     /geo_loc_name="Germany: Baltic Sea"
                     /collection_date="2018-09-03"
WGS         JBAFTW010000001-JBAFTW010000108
WGS_SCAFLD  NZ_JBAFTW010000001-NZ_JBAFTW010000108
//
LOCUS       NZ_JAURUP010000000   2576907 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Thermoanaerobacter pentosaceus strain DSM 25963, whole genome
            shotgun sequencing project.
ACCESSION   NZ_JAURUP000000000
VERSION     NZ_JAURUP000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN18242732
            Assembly: GCF_030803985.1
KEYWORDS    WGS; RefSeq.
SOURCE      Thermoanaerobacter pentosaceus
  ORGANISM  Thermoanaerobacter pentosaceus
            Bacteria; Bacillati; Bacillota; Clostridia; Thermoanaerobacterales;
            Thermoanaerobacteraceae; Thermoanaerobacter; Thermoanaerobacter
            thermocopriae group.
REFERENCE   1  (bases 1 to 2576907)
  AUTHORS   Goeker,M.
  TITLE     Genomic Encyclopedia of Type Strains, Phase IV (KMG-IV): sequencing
            the most valuable type-strain genomes for metagenomic binning,
            comparative biology and taxonomic classification
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2576907)
  AUTHORS   Goeker,M., Huntemann,M., Clum,A., Wang,J., Palaniappan,K.,
            Ritter,S., Chen,I.-M., Stamatis,D., Reddy,T., O'Malley,R., Daum,C.,
            Shapiro,N., Ivanova,N., Kyrpides,N. and Woyke,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-JUL-2023) Prokaryote Super Program, DOE Joint Genome
            Institute, 1 Cyclotron Road, Mail Stop: 91R0183, Berkeley, CA
            94720, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAURUP000000000.1.
            The Thermoanaerobacter pentosaceus whole genome shotgun (WGS)
            project has the project accession NZ_JAURUP000000000.  This version
            of the project (01) has the accession number NZ_JAURUP010000000,
            and consists of sequences JAURUP010000001-JAURUP010000076.
            pi_orcid: https://orcid.org/0000-0002-5144-6200.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.14.1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 372.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_030803985.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:30:40
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,636
            CDSs (total)                      :: 2,569
            Genes (coding)                    :: 2,487
            CDSs (with protein)               :: 2,487
            Genes (RNA)                       :: 67
            rRNAs                             :: 3, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 2, 3, 1 (5S, 16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 24 of 82
            Pseudo Genes (incomplete)         :: 65 of 82
            Pseudo Genes (internal stop)      :: 8 of 82
            Pseudo Genes (multiple problems)  :: 14 of 82
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2576907
                     /organism="Thermoanaerobacter pentosaceus"
                     /mol_type="genomic DNA"
                     /strain="DSM 25963"
                     /culture_collection="DSM:25963"
                     /type_material="type strain of Thermoanaerobacter
                     pentosaceus"
                     /db_xref="taxon:694059"
WGS         JAURUP010000001-JAURUP010000076
WGS_SCAFLD  NZ_JAURUP010000001-NZ_JAURUP010000076
//
LOCUS       NZ_JBAFUA010000000   3949506 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Vibrio cholerae strain 18-VB00275, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBAFUA000000000
VERSION     NZ_JBAFUA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37977888
            Assembly: GCF_037462835.1
KEYWORDS    WGS; RefSeq.
SOURCE      Vibrio cholerae
  ORGANISM  Vibrio cholerae
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Vibrionales; Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 3949506)
  AUTHORS   Fleischmann,S.
  TITLE     NOVC from German coastal regions
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3949506)
  AUTHORS   Fleischmann,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-JAN-2024) School of Veterinary Medicine; Institute of
            Food Safety and Food Hygiene, Freie Universitaet Berlin, Koenigsweg
            69, Berlin 14163, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBAFUA000000000.1.
            The Vibrio cholerae whole genome shotgun (WGS) project has the
            project accession NZ_JBAFUA000000000.  This version of the project
            (01) has the accession number NZ_JBAFUA010000000, and consists of
            sequences JBAFUA010000001-JBAFUA010000134.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Shovill v. v. 1.1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 5x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_037462835.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 11:32:14
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,686
            CDSs (total)                      :: 3,569
            Genes (coding)                    :: 3,504
            CDSs (with protein)               :: 3,504
            Genes (RNA)                       :: 117
            rRNAs                             :: 7, 10, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 6, 1 (5S, 16S)
            partial rRNAs                     :: 1, 9, 4 (5S, 16S, 23S)
            tRNAs                             :: 92
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 14 of 65
            Pseudo Genes (incomplete)         :: 48 of 65
            Pseudo Genes (internal stop)      :: 11 of 65
            Pseudo Genes (multiple problems)  :: 6 of 65
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3949506
                     /organism="Vibrio cholerae"
                     /mol_type="genomic DNA"
                     /strain="18-VB00275"
                     /serotype="non-O1/non-O139"
                     /isolation_source="sediment"
                     /db_xref="taxon:666"
                     /geo_loc_name="Germany: Baltic Sea"
                     /collection_date="2017-09-18"
WGS         JBAFUA010000001-JBAFUA010000134
WGS_SCAFLD  NZ_JBAFUA010000001-NZ_JBAFUA010000134
//
LOCUS       NZ_JBCPTA010000000   2712211 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain EB3, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPTA000000000
VERSION     NZ_JBCPTA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065887
            Assembly: GCF_045909595.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2712211)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2712211)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPTA000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPTA000000000.  This version of the
            project (01) has the accession number NZ_JBCPTA010000000, and
            consists of sequences JBCPTA010000001-JBCPTA010000097.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045909595.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:50:06
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,694
            CDSs (total)                      :: 2,634
            Genes (coding)                    :: 2,521
            CDSs (with protein)               :: 2,521
            Genes (RNA)                       :: 60
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 113
            CDSs (without protein)            :: 113
            Pseudo Genes (ambiguous residues) :: 1 of 113
            Pseudo Genes (frameshifted)       :: 60 of 113
            Pseudo Genes (incomplete)         :: 46 of 113
            Pseudo Genes (internal stop)      :: 22 of 113
            Pseudo Genes (multiple problems)  :: 12 of 113
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2712211
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="EB3"
                     /isolation_source="Mastitis milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Inner Mongolia autonomous region"
                     /collection_date="2020-08"
                     /collected_by="Zekun Li"
WGS         JBCPTA010000001-JBCPTA010000097
WGS_SCAFLD  NZ_JBCPTA010000001-NZ_JBCPTA010000097
//
LOCUS       NZ_JBCPTN010000000   2827151 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain BA4, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPTN000000000
VERSION     NZ_JBCPTN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065874
            Assembly: GCF_045909855.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2827151)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2827151)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPTN000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPTN000000000.  This version of the
            project (01) has the accession number NZ_JBCPTN010000000, and
            consists of sequences JBCPTN010000001-JBCPTN010000180.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045909855.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:52:16
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,841
            CDSs (total)                      :: 2,777
            Genes (coding)                    :: 2,647
            CDSs (with protein)               :: 2,647
            Genes (RNA)                       :: 64
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2 (5S)
            partial rRNAs                     :: 2, 2 (16S, 23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 130
            CDSs (without protein)            :: 130
            Pseudo Genes (ambiguous residues) :: 0 of 130
            Pseudo Genes (frameshifted)       :: 56 of 130
            Pseudo Genes (incomplete)         :: 60 of 130
            Pseudo Genes (internal stop)      :: 33 of 130
            Pseudo Genes (multiple problems)  :: 18 of 130
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2827151
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="BA4"
                     /isolation_source="Raw milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Inner Mongolia autonomous region"
                     /collection_date="2020-08"
                     /collected_by="Zekun Li"
WGS         JBCPTN010000001-JBCPTN010000180
WGS_SCAFLD  NZ_JBCPTN010000001-NZ_JBCPTN010000180
//
LOCUS       NZ_JBCPVZ010000000   2767128 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain 119, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPVZ000000000
VERSION     NZ_JBCPVZ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065809
            Assembly: GCF_045911135.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2767128)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2767128)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPVZ000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPVZ000000000.  This version of the
            project (01) has the accession number NZ_JBCPVZ010000000, and
            consists of sequences JBCPVZ010000001-JBCPVZ010000081.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045911135.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 14:08:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,779
            CDSs (total)                      :: 2,716
            Genes (coding)                    :: 2,634
            CDSs (with protein)               :: 2,634
            Genes (RNA)                       :: 63
            rRNAs                             :: 2, 4, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 4 (5S, 16S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 82
            CDSs (without protein)            :: 82
            Pseudo Genes (ambiguous residues) :: 0 of 82
            Pseudo Genes (frameshifted)       :: 44 of 82
            Pseudo Genes (incomplete)         :: 39 of 82
            Pseudo Genes (internal stop)      :: 19 of 82
            Pseudo Genes (multiple problems)  :: 16 of 82
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2767128
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="119"
                     /isolation_source="Raw milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Henan"
                     /collection_date="2020-06"
                     /collected_by="Zekun Li"
WGS         JBCPVZ010000001-JBCPVZ010000081
WGS_SCAFLD  NZ_JBCPVZ010000001-NZ_JBCPVZ010000081
//
LOCUS       NZ_JBPJZG010000000   7176883 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Variovorax trehalosi strain LT1R20, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBPJZG000000000
VERSION     NZ_JBPJZG000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN49534231
            Assembly: GCF_051216415.1
KEYWORDS    WGS; RefSeq.
SOURCE      Variovorax trehalosi
  ORGANISM  Variovorax trehalosi
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Variovorax.
REFERENCE   1  (bases 1 to 7176883)
  AUTHORS   Chen,Z. and Liu,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUN-2025) CGMCC, Institute of Microbiology, Chinese
            Academy of Sciences, NO. 1 West Beichen, Chaoyang District,
            Beijing, Beijing 100101, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPJZG000000000.1.
            The Variovorax trehalosi whole genome shotgun (WGS) project has the
            project accession NZ_JBPJZG000000000.  This version of the project
            (01) has the accession number NZ_JBPJZG010000000, and consists of
            sequences JBPJZG010000001-JBPJZG010000028.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051216415.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:20:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,713
            CDSs (total)                      :: 6,652
            Genes (coding)                    :: 6,591
            CDSs (with protein)               :: 6,591
            Genes (RNA)                       :: 61
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 55
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 61
            CDSs (without protein)            :: 61
            Pseudo Genes (ambiguous residues) :: 0 of 61
            Pseudo Genes (frameshifted)       :: 10 of 61
            Pseudo Genes (incomplete)         :: 57 of 61
            Pseudo Genes (internal stop)      :: 4 of 61
            Pseudo Genes (multiple problems)  :: 10 of 61
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7176883
                     /organism="Variovorax trehalosi"
                     /mol_type="genomic DNA"
                     /strain="LT1R20"
                     /isolation_source="glacier"
                     /culture_collection="CGMCC:1.11621"
                     /type_material="type strain of Variovorax trehalosi"
                     /db_xref="taxon:3443729"
                     /geo_loc_name="China"
                     /collection_date="2016-10"
WGS         JBPJZG010000001-JBPJZG010000028
WGS_SCAFLD  NZ_JBPJZG010000001-NZ_JBPJZG010000028
//
LOCUS       NZ_JBCPSU010000000   2749773 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain HA2, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPSU000000000
VERSION     NZ_JBCPSU000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065893
            Assembly: GCF_045909455.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2749773)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2749773)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPSU000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPSU000000000.  This version of the
            project (01) has the accession number NZ_JBCPSU010000000, and
            consists of sequences JBCPSU010000001-JBCPSU010000112.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045909455.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:51:51
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,765
            CDSs (total)                      :: 2,700
            Genes (coding)                    :: 2,604
            CDSs (with protein)               :: 2,604
            Genes (RNA)                       :: 65
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 2 (5S, 16S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 96
            CDSs (without protein)            :: 96
            Pseudo Genes (ambiguous residues) :: 0 of 96
            Pseudo Genes (frameshifted)       :: 41 of 96
            Pseudo Genes (incomplete)         :: 48 of 96
            Pseudo Genes (internal stop)      :: 24 of 96
            Pseudo Genes (multiple problems)  :: 15 of 96
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2749773
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="HA2"
                     /isolation_source="Raw milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Inner Mongolia autonomous region"
                     /collection_date="2020-08"
                     /collected_by="Zekun Li"
WGS         JBCPSU010000001-JBCPSU010000112
WGS_SCAFLD  NZ_JBCPSU010000001-NZ_JBCPSU010000112
//
LOCUS       NZ_JBCPTX010000000   2799712 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain 80-1, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPTX000000000
VERSION     NZ_JBCPTX000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065864
            Assembly: GCF_045910015.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2799712)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2799712)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPTX000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPTX000000000.  This version of the
            project (01) has the accession number NZ_JBCPTX010000000, and
            consists of sequences JBCPTX010000001-JBCPTX010000128.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045910015.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 13:59:28
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,809
            CDSs (total)                      :: 2,749
            Genes (coding)                    :: 2,624
            CDSs (with protein)               :: 2,624
            Genes (RNA)                       :: 60
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 52
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 125
            CDSs (without protein)            :: 125
            Pseudo Genes (ambiguous residues) :: 0 of 125
            Pseudo Genes (frameshifted)       :: 54 of 125
            Pseudo Genes (incomplete)         :: 55 of 125
            Pseudo Genes (internal stop)      :: 29 of 125
            Pseudo Genes (multiple problems)  :: 13 of 125
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2799712
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="80-1"
                     /isolation_source="Raw milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Henan"
                     /collection_date="2020-06"
                     /collected_by="Zekun Li"
WGS         JBCPTX010000001-JBCPTX010000128
WGS_SCAFLD  NZ_JBCPTX010000001-NZ_JBCPTX010000128
//
LOCUS       NZ_CDVKZB010000000   6384064 bp    DNA     linear   ENV 27-MAR-2026
DEFINITION  MAG: Tistrella mobilis isolate MarMAG_030669, whole genome shotgun
            sequencing project.
ACCESSION   NZ_CDVKZB000000000
VERSION     NZ_CDVKZB000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA120737563
            Assembly: GCF_977707525.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq.
SOURCE      Tistrella mobilis (marine metagenome)
  ORGANISM  Tistrella mobilis
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Geminicoccales; Geminicoccaceae; Tistrella.
REFERENCE   1  (bases 1 to 6384064)
  AUTHORS   Avila Santos,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2025) UFZ, Department of Computational Biology
            and Chemistry - Microbial Data Science group, Permoserstrasse 15,
            Leipzig, Germany
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CDVKZB000000000.1.
            The Tistrella mobilis whole genome shotgun (WGS) project has the
            project accession NZ_CDVKZB000000000.  This version of the project
            (01) has the accession number NZ_CDVKZB010000000, and consists of
            sequences CDVKZB010000001-CDVKZB010000035.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_977707525.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 19:22:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,609
            CDSs (total)                      :: 5,560
            Genes (coding)                    :: 5,515
            CDSs (with protein)               :: 5,515
            Genes (RNA)                       :: 49
            tRNAs                             :: 45
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 45
            CDSs (without protein)            :: 45
            Pseudo Genes (ambiguous residues) :: 0 of 45
            Pseudo Genes (frameshifted)       :: 11 of 45
            Pseudo Genes (incomplete)         :: 40 of 45
            Pseudo Genes (internal stop)      :: 2 of 45
            Pseudo Genes (multiple problems)  :: 8 of 45
            CRISPR Arrays                     :: 6
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6384064
                     /organism="Tistrella mobilis"
                     /mol_type="genomic DNA"
                     /isolate="MarMAG_030669"
                     /isolation_source="Mariana Trench, free-living
                     microorganism hadal water (9,600 m)"
                     /db_xref="taxon:171437"
                     /environmental_sample
                     /geo_loc_name="Pacific Ocean"
                     /collection_date="2016-09-16"
                     /metagenome_source="marine metagenome"
                     /metagenomic
WGS         CDVKZB010000001-CDVKZB010000035
WGS_SCAFLD  NZ_CDVKZB010000001-NZ_CDVKZB010000035
//
LOCUS       NZ_JBCPUO010000000   2757411 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain 55, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBCPUO000000000
VERSION     NZ_JBCPUO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN41065847
            Assembly: GCF_045910375.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2757411)
  AUTHORS   Cui,M., Wang,H., Li,Z., Han,N., Li,J., Peng,W., Zhang,X., Zhao,Q.
            and Wang,X.
  TITLE     Phenotypic and Molecular Characterization of Staphylococcus aureus
            in Dairy Farms from Henan Province and the Inner Mongolia
            Autonomous Region, China
  JOURNAL   Microorganisms 12 (11), 2150 (2024)
   PUBMED   39597539
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2757411)
  AUTHORS   Cui,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-APR-2024) The Department of Safety Evaluation, China
            Institute of Veterinary Drug Control, No. 8 South Street,
            Zhongguancun, Haidian District, Beijing, Beijing 100081, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBCPUO000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBCPUO000000000.  This version of the
            project (01) has the accession number NZ_JBCPUO010000000, and
            consists of sequences JBCPUO010000001-JBCPUO010000065.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045910375.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 14:04:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,767
            CDSs (total)                      :: 2,704
            Genes (coding)                    :: 2,619
            CDSs (with protein)               :: 2,619
            Genes (RNA)                       :: 63
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 53
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 85
            CDSs (without protein)            :: 85
            Pseudo Genes (ambiguous residues) :: 0 of 85
            Pseudo Genes (frameshifted)       :: 44 of 85
            Pseudo Genes (incomplete)         :: 42 of 85
            Pseudo Genes (internal stop)      :: 19 of 85
            Pseudo Genes (multiple problems)  :: 15 of 85
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2757411
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="55"
                     /isolation_source="Raw milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="China: Henan"
                     /collection_date="2020-06"
                     /collected_by="Zekun Li"
WGS         JBCPUO010000001-JBCPUO010000065
WGS_SCAFLD  NZ_JBCPUO010000001-NZ_JBCPUO010000065
//
LOCUS       NZ_JBJCJC010000000   2799480 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Staphylococcus aureus strain Sa10, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBJCJC000000000
VERSION     NZ_JBJCJC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN43403994
            Assembly: GCF_045760505.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 2799480)
  AUTHORS   Pindaru,A., Barbu,I.C., Sarbu,E., Mitache,M., Marutescu,L. and
            Chifiriuc,C.
  TITLE     Advanced Algorithm for Assessing Antimicrobial and Anti-Pathogenic
            Efficacy of Chemical Disinfectants Against Resistant ESKAPE
            Bacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2799480)
  AUTHORS   Barbu,I.C., Gheorghe-Barbu,I., Dragomir,R.-I., Paraschiv,S.,
            Banica,L. and Surleac,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-SEP-2024) Microbiology, University of Bucharest,
            Independentei 91-95, Bucharest 050095, Romania
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBJCJC000000000.1.
            The Staphylococcus aureus whole genome shotgun (WGS) project has
            the project accession NZ_JBJCJC000000000.  This version of the
            project (01) has the accession number NZ_JBJCJC010000000, and
            consists of sequences JBJCJC010000001-JBJCJC010000245.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 06-JUL-2024
            Assembly Method        :: SPAdes v. 3.13.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 37x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_045760505.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 12:29:50
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,850
            CDSs (total)                      :: 2,790
            Genes (coding)                    :: 2,699
            CDSs (with protein)               :: 2,699
            Genes (RNA)                       :: 60
            rRNAs                             :: 2, 3, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1, 3 (5S, 16S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 91
            CDSs (without protein)            :: 91
            Pseudo Genes (ambiguous residues) :: 0 of 91
            Pseudo Genes (frameshifted)       :: 40 of 91
            Pseudo Genes (incomplete)         :: 57 of 91
            Pseudo Genes (internal stop)      :: 13 of 91
            Pseudo Genes (multiple problems)  :: 18 of 91
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2799480
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="Sa10"
                     /host="Homo sapiens"
                     /db_xref="taxon:1280"
                     /geo_loc_name="Romania: Galati"
                     /collection_date="2020"
WGS         JBJCJC010000001-JBJCJC010000245
WGS_SCAFLD  NZ_JBJCJC010000001-NZ_JBJCJC010000245
//
LOCUS       NZ_JBPJZO010000000   5621679 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Variovorax nitratireducens strain RT4R15, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBPJZO000000000
VERSION     NZ_JBPJZO000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN49534239
            Assembly: GCF_051216545.1
KEYWORDS    WGS; RefSeq.
SOURCE      Variovorax nitratireducens
  ORGANISM  Variovorax nitratireducens
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Variovorax.
REFERENCE   1  (bases 1 to 5621679)
  AUTHORS   Chen,Z. and Liu,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUN-2025) CGMCC, Institute of Microbiology, Chinese
            Academy of Sciences, NO. 1 West Beichen, Chaoyang District,
            Beijing, Beijing 100101, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPJZO000000000.1.
            The Variovorax nitratireducens whole genome shotgun (WGS) project
            has the project accession NZ_JBPJZO000000000.  This version of the
            project (01) has the accession number NZ_JBPJZO010000000, and
            consists of sequences JBPJZO010000001-JBPJZO010000033.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051216545.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:05:49
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,432
            CDSs (total)                      :: 5,376
            Genes (coding)                    :: 5,277
            CDSs (with protein)               :: 5,277
            Genes (RNA)                       :: 56
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 99
            CDSs (without protein)            :: 99
            Pseudo Genes (ambiguous residues) :: 0 of 99
            Pseudo Genes (frameshifted)       :: 37 of 99
            Pseudo Genes (incomplete)         :: 81 of 99
            Pseudo Genes (internal stop)      :: 9 of 99
            Pseudo Genes (multiple problems)  :: 27 of 99
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5621679
                     /organism="Variovorax nitratireducens"
                     /mol_type="genomic DNA"
                     /strain="RT4R15"
                     /isolation_source="glacier"
                     /culture_collection="CGMCC:1.24376"
                     /type_material="type strain of Variovorax nitratireducens"
                     /db_xref="taxon:3443737"
                     /geo_loc_name="China"
                     /collection_date="2016-10"
WGS         JBPJZO010000001-JBPJZO010000033
WGS_SCAFLD  NZ_JBPJZO010000001-NZ_JBPJZO010000033
//
LOCUS       NZ_JAWLVJ010000000   4189912 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Terasakiella sediminum strain FCG-A23, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JAWLVJ000000000
VERSION     NZ_JAWLVJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN37733157
            Assembly: GCF_033100395.1
KEYWORDS    WGS; RefSeq.
SOURCE      Terasakiella sediminum
  ORGANISM  Terasakiella sediminum
            Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria;
            Rhodospirillales; Terasakiellaceae; Terasakiella.
REFERENCE   1  (bases 1 to 4189912)
  AUTHORS   Zhou,H., Qu,J., Lin,X., Wang,N., Jiang,Z., Lai,Q. and Xu,H.
  TITLE     Two Novel Thiosulfate-Oxidizing Species from Coastal Sediments
            Reveal Distinct Ecological Strategies: Pseudothioclava alba sp.
            nov. and Terasakiella sediminum sp. nov
  JOURNAL   Microorganisms 14 (2), 481 (2026)
   PUBMED   41753767
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4189912)
  AUTHORS   Xu,H. and Qu,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-OCT-2023) school of life sciences, XIAMEN University,
            Xiang'an South Road No. 422, Xiamen, Fujian 361102, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAWLVJ000000000.1.
            The Terasakiella sediminum whole genome shotgun (WGS) project has
            the project accession NZ_JAWLVJ000000000.  This version of the
            project (01) has the accession number NZ_JAWLVJ010000000, and
            consists of sequences JAWLVJ010000001-JAWLVJ010000082.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 10.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_033100395.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:31:07
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,992
            CDSs (total)                      :: 3,939
            Genes (coding)                    :: 3,915
            CDSs (with protein)               :: 3,915
            Genes (RNA)                       :: 53
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 24
            CDSs (without protein)            :: 24
            Pseudo Genes (ambiguous residues) :: 0 of 24
            Pseudo Genes (frameshifted)       :: 5 of 24
            Pseudo Genes (incomplete)         :: 19 of 24
            Pseudo Genes (internal stop)      :: 0 of 24
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4189912
                     /organism="Terasakiella sediminum"
                     /mol_type="genomic DNA"
                     /strain="FCG-A23"
                     /isolation_source="sediment"
                     /type_material="type strain of Terasakiella sediminum"
                     /db_xref="taxon:3080561"
                     /geo_loc_name="China: Guangxi"
                     /collection_date="2023-08"
WGS         JAWLVJ010000001-JAWLVJ010000082
WGS_SCAFLD  NZ_JAWLVJ010000001-NZ_JAWLVJ010000082
//
LOCUS       NZ_JBOEQA010000000   2360580 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Thermoanaerobacter mathranii strain LV19, whole genome shotgun
            sequencing project.
ACCESSION   NZ_JBOEQA000000000
VERSION     NZ_JBOEQA000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN48763325
            Assembly: GCF_050686075.1
KEYWORDS    WGS; RefSeq.
SOURCE      Thermoanaerobacter mathranii
  ORGANISM  Thermoanaerobacter mathranii
            Bacteria; Bacillati; Bacillota; Clostridia; Thermoanaerobacterales;
            Thermoanaerobacteraceae; Thermoanaerobacter; Thermoanaerobacter
            thermocopriae group.
REFERENCE   1  (bases 1 to 2360580)
  AUTHORS   Ryzhmanova,Y.V., Makhortykh,S., Shcherbakova,V.A. and Delegan,Y.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-MAY-2025) Skryabin Institute of Biochemistry and
            Physiology of Microorganisms, Russian Academy of Sciences, Federal
            Research Center 'Pushchino Scientific Center for Biological
            Research of the RAS', prospect Nauki 5, Pushchino 142290, Russia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBOEQA000000000.1.
            The Thermoanaerobacter mathranii whole genome shotgun (WGS) project
            has the project accession NZ_JBOEQA000000000.  This version of the
            project (01) has the accession number NZ_JBOEQA010000000, and
            consists of sequences JBOEQA010000001-JBOEQA010000037.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Bacteria and source DNA available from Thermoanaerobacter mathranii
            strain LV19, VKM:B-3930.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15.4
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 116.5x
            Sequencing Technology  :: MGI G-50
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_050686075.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:33:55
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,407
            CDSs (total)                      :: 2,348
            Genes (coding)                    :: 2,284
            CDSs (with protein)               :: 2,284
            Genes (RNA)                       :: 59
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (16S, 23S)
            partial rRNAs                     :: 3 (5S)
            tRNAs                             :: 49
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 64
            CDSs (without protein)            :: 64
            Pseudo Genes (ambiguous residues) :: 0 of 64
            Pseudo Genes (frameshifted)       :: 28 of 64
            Pseudo Genes (incomplete)         :: 50 of 64
            Pseudo Genes (internal stop)      :: 6 of 64
            Pseudo Genes (multiple problems)  :: 19 of 64
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2360580
                     /organism="Thermoanaerobacter mathranii"
                     /mol_type="genomic DNA"
                     /strain="LV19"
                     /isolation_source="bottom sediments"
                     /culture_collection="VKM:B-3930"
                     /db_xref="taxon:583357"
                     /geo_loc_name="Russia: Okhotsk Sea"
                     /lat_lon="51.31 N 154.3728 E"
                     /collection_date="2023"
                     /collected_by="Ryzhmanova Y., Makhortykh S."
                     /identified_by="Ryzhmanova Y., Makhortykh S."
WGS         JBOEQA010000001-JBOEQA010000037
WGS_SCAFLD  NZ_JBOEQA010000001-NZ_JBOEQA010000037
//
LOCUS       NZ_DBFCCJ010000000   2964649 bp    DNA     linear   ENV 27-MAR-2026
DEFINITION  MAG: Ventrimonas sp. isolate MAG5429, whole genome shotgun
            sequencing project.
ACCESSION   NZ_DBFCCJ000000000
VERSION     NZ_DBFCCJ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN46330450
            Sequence Read Archive: SRR11413691
            Assembly: GCF_048380235.1
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; RefSeq; TPA:assembly.
SOURCE      Ventrimonas sp. (human gut metagenome)
  ORGANISM  Ventrimonas sp.
            Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales;
            Lachnospiraceae; Ventrimonas.
REFERENCE   1  (bases 1 to 2964649)
  AUTHORS   Olekhnovich,E.I. and Kanaeva,V.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-JAN-2025) genomic research and computational biology
            lab, Federal Research and Clinical Centre of Physical-Chemical
            Medicine, Malaya Pirogovskaya, Moscow 119160, Russia
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            DBFCCJ000000000.1.
            The Ventrimonas sp. whole genome shotgun (WGS) project has the
            project accession NZ_DBFCCJ000000000.  This version of the project
            (01) has the accession number NZ_DBFCCJ010000000, and consists of
            sequences DBFCCJ010000001-DBFCCJ010000090.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 1
            Genome Representation  :: Full
            Expected Final Version :: No
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_048380235.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 06:42:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,741
            Genes (coding)                    :: 2,685
            CDSs (with protein)               :: 2,685
            Genes (RNA)                       :: 65
            rRNAs                             :: 1, 4 (16S, 23S)
            partial rRNAs                     :: 1, 4 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 56
            CDSs (without protein)            :: 56
            Pseudo Genes (ambiguous residues) :: 0 of 56
            Pseudo Genes (frameshifted)       :: 8 of 56
            Pseudo Genes (incomplete)         :: 49 of 56
            Pseudo Genes (internal stop)      :: 4 of 56
            Pseudo Genes (multiple problems)  :: 5 of 56
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2964649
                     /organism="Ventrimonas sp."
                     /mol_type="genomic DNA"
                     /isolate="MAG5429"
                     /isolation_source="gut"
                     /host="Homo sapiens"
                     /db_xref="taxon:3048889"
                     /environmental_sample
                     /geo_loc_name="China"
                     /lat_lon="39.90 N 116.41 E"
                     /collection_date="2018-04-19"
                     /metagenome_source="human gut metagenome"
                     /metagenomic
WGS         DBFCCJ010000001-DBFCCJ010000090
WGS_SCAFLD  NZ_DBFCCJ010000001-NZ_DBFCCJ010000090
//
LOCUS       NZ_JBPJZF010000000   6130132 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Variovorax frigidus strain LT1R16, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBPJZF000000000
VERSION     NZ_JBPJZF000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN49534230
            Assembly: GCF_051216515.1
KEYWORDS    WGS; RefSeq.
SOURCE      Variovorax frigidus
  ORGANISM  Variovorax frigidus
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Variovorax.
REFERENCE   1  (bases 1 to 6130132)
  AUTHORS   Chen,Z. and Liu,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUN-2025) CGMCC, Institute of Microbiology, Chinese
            Academy of Sciences, NO. 1 West Beichen, Chaoyang District,
            Beijing, Beijing 100101, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPJZF000000000.1.
            The Variovorax frigidus whole genome shotgun (WGS) project has the
            project accession NZ_JBPJZF000000000.  This version of the project
            (01) has the accession number NZ_JBPJZF010000000, and consists of
            sequences JBPJZF010000001-JBPJZF010000023.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051216515.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:08:48
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,686
            CDSs (total)                      :: 5,634
            Genes (coding)                    :: 5,565
            CDSs (with protein)               :: 5,565
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 46
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 23 of 69
            Pseudo Genes (incomplete)         :: 58 of 69
            Pseudo Genes (internal stop)      :: 9 of 69
            Pseudo Genes (multiple problems)  :: 18 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6130132
                     /organism="Variovorax frigidus"
                     /mol_type="genomic DNA"
                     /strain="LT1R16"
                     /isolation_source="glacier"
                     /culture_collection="CGMCC:1.11618"
                     /type_material="type strain of Variovorax frigidus"
                     /db_xref="taxon:3443728"
                     /geo_loc_name="China"
                     /collection_date="2016-10"
WGS         JBPJZF010000001-JBPJZF010000023
WGS_SCAFLD  NZ_JBPJZF010000001-NZ_JBPJZF010000023
//
LOCUS       NZ_JBPJZN010000000   7492386 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Variovorax pasteuri strain RB2P76, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBPJZN000000000
VERSION     NZ_JBPJZN000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN49534238
            Assembly: GCF_051216735.1
KEYWORDS    WGS; RefSeq.
SOURCE      Variovorax pasteuri
  ORGANISM  Variovorax pasteuri
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Variovorax.
REFERENCE   1  (bases 1 to 7492386)
  AUTHORS   Chen,Z. and Liu,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUN-2025) CGMCC, Institute of Microbiology, Chinese
            Academy of Sciences, NO. 1 West Beichen, Chaoyang District,
            Beijing, Beijing 100101, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPJZN000000000.1.
            The Variovorax pasteuri whole genome shotgun (WGS) project has the
            project accession NZ_JBPJZN000000000.  This version of the project
            (01) has the accession number NZ_JBPJZN010000000, and consists of
            sequences JBPJZN010000001-JBPJZN010000059.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051216735.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:14:45
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,093
            CDSs (total)                      :: 7,038
            Genes (coding)                    :: 6,944
            CDSs (with protein)               :: 6,944
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 49
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 94
            CDSs (without protein)            :: 94
            Pseudo Genes (ambiguous residues) :: 0 of 94
            Pseudo Genes (frameshifted)       :: 21 of 94
            Pseudo Genes (incomplete)         :: 82 of 94
            Pseudo Genes (internal stop)      :: 10 of 94
            Pseudo Genes (multiple problems)  :: 18 of 94
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7492386
                     /organism="Variovorax pasteuri"
                     /mol_type="genomic DNA"
                     /strain="RB2P76"
                     /isolation_source="glacier"
                     /culture_collection="CGMCC:1.23833"
                     /db_xref="taxon:3443732"
                     /geo_loc_name="China"
                     /collection_date="2016-10"
WGS         JBPJZN010000001-JBPJZN010000059
WGS_SCAFLD  NZ_JBPJZN010000001-NZ_JBPJZN010000059
//
LOCUS       NZ_JBPJZE010000000   5300378 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Variovorax glucosi strain RHLX14, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBPJZE000000000
VERSION     NZ_JBPJZE000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN49534229
            Assembly: GCF_051216695.1
KEYWORDS    WGS; RefSeq.
SOURCE      Variovorax glucosi
  ORGANISM  Variovorax glucosi
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Variovorax.
REFERENCE   1  (bases 1 to 5300378)
  AUTHORS   Chen,Z. and Liu,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUN-2025) CGMCC, Institute of Microbiology, Chinese
            Academy of Sciences, NO. 1 West Beichen, Chaoyang District,
            Beijing, Beijing 100101, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPJZE000000000.1.
            The Variovorax glucosi whole genome shotgun (WGS) project has the
            project accession NZ_JBPJZE000000000.  This version of the project
            (01) has the accession number NZ_JBPJZE010000000, and consists of
            sequences JBPJZE010000001-JBPJZE010000462.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051216695.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:13:18
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,309
            CDSs (total)                      :: 5,248
            Genes (coding)                    :: 5,079
            CDSs (with protein)               :: 5,079
            Genes (RNA)                       :: 61
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 52
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 169
            CDSs (without protein)            :: 169
            Pseudo Genes (ambiguous residues) :: 0 of 169
            Pseudo Genes (frameshifted)       :: 19 of 169
            Pseudo Genes (incomplete)         :: 147 of 169
            Pseudo Genes (internal stop)      :: 12 of 169
            Pseudo Genes (multiple problems)  :: 8 of 169
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5300378
                     /organism="Variovorax glucosi"
                     /mol_type="genomic DNA"
                     /strain="RHLX14"
                     /isolation_source="glacier"
                     /culture_collection="CGMCC:1.10104"
                     /type_material="type strain of Variovorax glucosi"
                     /db_xref="taxon:1259731"
                     /geo_loc_name="China"
                     /collection_date="2016-10"
WGS         JBPJZE010000001-JBPJZE010000462
WGS_SCAFLD  NZ_JBPJZE010000001-NZ_JBPJZE010000462
//
LOCUS       NZ_JBPJZK010000000   7644337 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Variovorax nivicola strain ZT5P49, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBPJZK000000000
VERSION     NZ_JBPJZK000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN49534235
            Assembly: GCF_051216475.1
KEYWORDS    WGS; RefSeq.
SOURCE      Variovorax nivicola
  ORGANISM  Variovorax nivicola
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Variovorax.
REFERENCE   1  (bases 1 to 7644337)
  AUTHORS   Chen,Z. and Liu,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUN-2025) CGMCC, Institute of Microbiology, Chinese
            Academy of Sciences, NO. 1 West Beichen, Chaoyang District,
            Beijing, Beijing 100101, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPJZK000000000.1.
            The Variovorax nivicola whole genome shotgun (WGS) project has the
            project accession NZ_JBPJZK000000000.  This version of the project
            (01) has the accession number NZ_JBPJZK010000000, and consists of
            sequences JBPJZK010000001-JBPJZK010000040.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051216475.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:25:29
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 7,204
            CDSs (total)                      :: 7,140
            Genes (coding)                    :: 7,075
            CDSs (with protein)               :: 7,075
            Genes (RNA)                       :: 64
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 58
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 65
            CDSs (without protein)            :: 65
            Pseudo Genes (ambiguous residues) :: 0 of 65
            Pseudo Genes (frameshifted)       :: 18 of 65
            Pseudo Genes (incomplete)         :: 58 of 65
            Pseudo Genes (internal stop)      :: 4 of 65
            Pseudo Genes (multiple problems)  :: 13 of 65
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7644337
                     /organism="Variovorax nivicola"
                     /mol_type="genomic DNA"
                     /strain="ZT5P49"
                     /isolation_source="glacier"
                     /culture_collection="CGMCC:1.23581"
                     /type_material="type strain of Variovorax nivicola"
                     /db_xref="taxon:3443733"
                     /geo_loc_name="China"
                     /collection_date="2016-10"
WGS         JBPJZK010000001-JBPJZK010000040
WGS_SCAFLD  NZ_JBPJZK010000001-NZ_JBPJZK010000040
//
LOCUS       NZ_JBPJZQ010000000   6934091 bp    DNA     linear   BCT 27-MAR-2026
DEFINITION  Variovorax monticola strain GB4R4, whole genome shotgun sequencing
            project.
ACCESSION   NZ_JBPJZQ000000000
VERSION     NZ_JBPJZQ000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN49534241
            Assembly: GCF_051216535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Variovorax monticola
  ORGANISM  Variovorax monticola
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Burkholderiales; Comamonadaceae; Variovorax.
REFERENCE   1  (bases 1 to 6934091)
  AUTHORS   Chen,Z. and Liu,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUN-2025) CGMCC, Institute of Microbiology, Chinese
            Academy of Sciences, NO. 1 West Beichen, Chaoyang District,
            Beijing, Beijing 100101, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JBPJZQ000000000.1.
            The Variovorax monticola whole genome shotgun (WGS) project has the
            project accession NZ_JBPJZQ000000000.  This version of the project
            (01) has the accession number NZ_JBPJZQ010000000, and consists of
            sequences JBPJZQ010000001-JBPJZQ010000015.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.15
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 200x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_051216535.1-RS_2026_03_22
            Annotation Date                   :: 03/22/2026 07:24:41
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.10
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 6,488
            CDSs (total)                      :: 6,434
            Genes (coding)                    :: 6,386
            CDSs (with protein)               :: 6,386
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 48
            CDSs (without protein)            :: 48
            Pseudo Genes (ambiguous residues) :: 0 of 48
            Pseudo Genes (frameshifted)       :: 8 of 48
            Pseudo Genes (incomplete)         :: 40 of 48
            Pseudo Genes (internal stop)      :: 2 of 48
            Pseudo Genes (multiple problems)  :: 2 of 48
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6934091
                     /organism="Variovorax monticola"
                     /mol_type="genomic DNA"
                     /strain="GB4R4"
                     /isolation_source="glacier"
                     /culture_collection="CGMCC:1.24633"
                     /db_xref="taxon:3443738"
                     /geo_loc_name="China"
                     /collection_date="2016-10"
WGS         JBPJZQ010000001-JBPJZQ010000015
WGS_SCAFLD  NZ_JBPJZQ010000001-NZ_JBPJZQ010000015
//
